HHsearch alignment for GI: 254780945 and conserved domain: PTZ00110
>PTZ00110 helicase; Provisional.
Probab=99.94 E-value=3.9e-22 Score=193.20 Aligned_cols=347 Identities=20% Similarity=0.268 Sum_probs=243.0
Q ss_pred HHHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH--------HHCCEEEEEHHHH
Q ss_conf 9999863024-679889999999998410013430788621442236999999733444--------3054588612799
Q gi|254780945|r 262 AQKILRNIPF-SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVE--------AGGQAVIMAPIGI 332 (700)
Q Consensus 262 ~~~f~~~LPF-~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~--------~G~Q~alMaPTEI 332 (700)
T Consensus 193 il~~i~~~GF~~PTPIQ~qaIPiaLs----GrDv--IgiAqTGSGKTLAFlLP~l~hi~~q~~~~~~~gP~aLILaPTRE 266 (602)
T PTZ00110 193 ILKSIEAAGFTEPTPIQVQGWPIALS----GRDM--IGIAETGSGKTLAFLLPAIVHINAQPLLRPGDGPIVLVLAPTRE 266 (602)
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHC----CCCE--EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHH
T ss_conf 99999976999999899999879856----9867--99878978899999999999985163436789976999738399
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECH-----HHCCCCCCCCCCCEEEECCCCC--
Q ss_conf 999999862110145786589962464225667687762134754864111-----2013345544441788521013--
Q gi|254780945|r 333 LAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTH-----ALFQDSIQYYKLILVIVDEQHR-- 405 (700)
Q Consensus 333 LA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTH-----AL~q~~v~F~~LgLvViDEQHR-- 405 (700)
T Consensus 267 LA~QI~~e~~~~~~~~~ir~~~i~GG~~~~~---Q~~~L~~G-~dIvVATPGRLiDlL~~~~~~L~~v~yLVLDEADRML 342 (602)
T PTZ00110 267 LAEQIREQALQFGRSSKLKNSVAYGGVPKRF---QTYALRRG-VEILIACPGRLIDFLESNVTNLRRVTYLVLDEADRML 342 (602)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCHHH---HHHHHCCC-CCEEEECCHHHHHHHHCCCCCCCCEEEEEEECHHHHH
T ss_conf 9999999999971547854999979968799---99987169-9999979238999996499874310289987577663
Q ss_pred ---CCHHHHHHHHHCCCCCCCEEECHHHHHHH--HHHHHHHC----CCHHHHCCCCCCCCCCEEEEE--E-CCCHHHHHH
Q ss_conf ---35688998740256776101010132278--99997520----101111023557666207999--7-020026899
Q gi|254780945|r 406 ---FGVQQRLKLTQKATAPHVLLMTATPIPRT--LVLTSLGD----IDISKITEKPAGRKPIKTVII--P-INRIDEVIE 473 (700)
Q Consensus 406 ---FGV~QR~~L~~Kg~~ph~L~MtATPIPRT--Lal~~ygd----ldvS~i~e~P~gR~~I~T~~~--~-~~~~~~~~~ 473 (700)
T Consensus 343 DmGFe~qI~~Il~~i~pdRQTlLFSAT~p~~V~~LA~~~L~~~Pv~I~Vg~~~~~a~--~~I~Q~v~vv~~~eK~~~L~~ 420 (602)
T PTZ00110 343 DMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQSLARDLCKEEPVHVNVGSLDLTTC--HNIKQEVFVIEEHEKRAKLKE 420 (602)
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC--CCCEEEEEEECHHHHHHHHHH
T ss_conf 546299999999858978779999558998999999998206988999368887777--870589999651889999999
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHC
Q ss_conf 99763103873899971201221112101466666668663710312014699899999999975598699998003410
Q gi|254780945|r 474 RLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEV 553 (700)
Q Consensus 474 ~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEV 553 (700)
T Consensus 421 lL~~~-~~~~kvIIFvnTK--------~~ad~L~~~L~~-~G~~a~~LHGd~~Q~eR~~~L~~Fr~G~~~ILVATDVAAR 490 (602)
T PTZ00110 421 LLGQI-MDGGKILIFSETK--------KGADTLTKELRL-DGWPALCIHGDKKQEERTWVLNEFKTGKHPIMIATDVASR 490 (602)
T ss_pred HHHHC-CCCCCEEEEECCH--------HHHHHHHHHHHH-CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHC
T ss_conf 99852-7899689992973--------899999999986-7995798208899999999999997699988988222331
Q ss_pred CCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
Q ss_conf 468887658998585254746887730116678983599997088899879999999984142589999998520630
Q gi|254780945|r 554 GIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTEDGFLIAEEDLKQRKEG 631 (700)
Q Consensus 554 Gvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~dGf~iAe~Dl~lRG~G 631 (700)
T Consensus 491 GLDI~dV~~VINYD~P~~~edYVHRI-GRTGRAG~kG~A~TF~Tpd~~~~a~~Lv~~L~ea~q~vp~~L~~la~~~~~ 567 (602)
T PTZ00110 491 GLDVRDVKYVINFDFPNQIEDYVHRI-GRTGRAGAKGASYTFLTPDKYRSARELVKLMREAKQEIPPELEKLANERSY 567 (602)
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
T ss_conf 55515798799958979802210135-615068993169999777707789999999998389999899998735688