HHsearch alignment for GI: 254780945 and conserved domain: pfam00271
>pfam00271 Helicase_C Helicase conserved C-terminal domain. The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.
Probab=96.62 E-value=0.0046 Score=43.58 Aligned_cols=59 Identities=20% Similarity=0.344 Sum_probs=52.5
Q ss_pred HCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEEECCC
Q ss_conf 014578658996246422566768776213475486411120133455444417885210
Q gi|254780945|r 344 YTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVDEQ 403 (700)
Q Consensus 344 ~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLvViDEQ 403 (700)
T Consensus 2 ~l~~~g~~~~~i~g~~~~~~R~~~~~~f~~~~~~ilv~t~-~~~~Gid~~~~~~vi~~~~ 60 (78)
T pfam00271 2 LLRKPGIKVARLHGGLSQEEREEILEDFRNGKSKVLVATD-VAGRGIDLPDVNVVINYDL 60 (78)
T ss_pred CHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEC-CCCCCCCCCCCCEEEEECC
T ss_conf 4556898599986979999999999999879973999925-6525677878999999789