HHsearch alignment for GI: 254780945 and conserved domain: pfam05496

>pfam05496 RuvB_N Holliday junction DNA helicase ruvB N-terminus. The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair. Branch migration is catalysed by the RuvB protein that is targeted to the Holliday junction by the structure specific RuvA protein. This family contains the N-terminal region of the protein.
Probab=91.75  E-value=1.2  Score=24.75  Aligned_cols=20  Identities=25%  Similarity=0.350  Sum_probs=16.4

Q ss_pred             EEEECCCCCCCHHHHHHHHH
Q ss_conf             78852101335688998740
Q gi|254780945|r  397 LVIVDEQHRFGVQQRLKLTQ  416 (700)
Q Consensus       397 LvViDEQHRFGV~QR~~L~~  416 (700)
T Consensus       104 ILFIDEIHr~nK~qqd~Llp  123 (234)
T pfam05496       104 VLFIDEIHRLNRAVEEILYP  123 (234)
T ss_pred             EEEEECHHHCCHHHHHHCCC
T ss_conf             89996654358768874455