HHsearch alignment for GI: 254780945 and conserved domain: smart00487

Probab=93.62  E-value=0.69  Score=26.56  Aligned_cols=115  Identities=17%  Similarity=0.232  Sum_probs=77.9

Q ss_pred             HHHHHHCC--CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC----CEECCCCCCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             99763103--87389997120122111210146666666866371----0312014699899999999975598699998
Q gi|254780945|r  474 RLKVVLSE--GKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTS----SIAIIHGRMSDIDKESVMDSFKNGTCKLLIA  547 (700)
Q Consensus       474 ~i~~~l~~--g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~----~v~~lHGkm~~~ek~~~m~~F~~g~~~iLva  547 (700)
T Consensus        44 ~~~~~~~~~~~~~~li~~P~~~--------l~~q~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~i~  111 (201)
T smart00487       44 PALEALKRGKGKRVLVLVPTRE--------LAEQWAEELKKLGPSLGLKVVGLYGGDSK----REQLRKLESGKTDILVT  111 (201)
T ss_pred             HHHHHHHCCCCCEEEEEECCHH--------HHHHHHHHHHHCCCCCEEEEEEEECCCCH----HHHHHHHHCCCCCEEEE
T ss_conf             9999863389975999908599--------99999988601021020445565247737----99999997599989995


Q ss_pred             C-----HHHHCC-CCCCCCCEEEEECHHHCCH-HHHHHHHHCCCCCCCCEEEEEEECCCC
Q ss_conf             0-----034104-6888765899858525474-688773011667898359999708889
Q gi|254780945|r  548 T-----TVIEVG-IDVVDASIIIIENAEHFGL-AQLHQLRGRVGRGEEISSCILLYHPPL  600 (700)
Q Consensus       548 T-----tviEVG-vdvpna~~mvI~~aerfGL-sqLHQLRGRVGRg~~~s~c~l~~~~~~  600 (700)
T Consensus       112 t~~~l~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~~  171 (201)
T smart00487      112 TPGRLLDLLENDLLELSNVDLVILDEAHRLLDGGFGDQLEKLLKLLPKNVQLLLLSATPP  171 (201)
T ss_pred             CHHHHHHHHHHCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCC
T ss_conf             589999999727545254319999896775125709999999996799997899924898