RPSBLAST alignment for GI: 254780945 and conserved domain: TIGR00614

>gnl|CDD|129701 TIGR00614, recQ_fam, ATP-dependent DNA helicase, RecQ family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Length = 470

 Score = 47.1 bits (112), Expect = 2e-05
 Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 31/236 (13%)

Query: 379 IIGTHALFQDSIQYYKLILVIVDEQH---RFGVQQRLKLTQ----KATAPHVLLM----T 427
              ++ L Q   +   + L+ VDE H   ++G   R         K   P+V +M    T
Sbjct: 112 CSASNRLLQTLEERKGITLIAVDEAHCISQWGHDFRPDYKALGSLKQKFPNVPIMALTAT 171

Query: 428 ATPIPRTLVLTSLGDIDISKITEKPAGRKPIK-TVIIPINRIDEVIERLKVVLSEGKKAY 486
           A+P  R  +L  L  +   +I      R  +   V     +I E + R      +GK   
Sbjct: 172 ASPSVREDILRQLN-LKNPQIFCTSFDRPNLYYEVRRKTPKILEDLLRFIRKEFKGKSGI 230

Query: 487 WICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLI 546
             CP          R   E+  +  ++   +    H  +    ++ V   F+    ++++
Sbjct: 231 IYCPS---------RKKSEQVTASLQNLGIAAGAYHAGLEISARDDVHHKFQRDEIQVVV 281

Query: 547 ATTVIEVGIDVVDASIIIIENAEHFGLAQ----LHQLRGRVGRGEEISSCILLYHP 598
           AT    +GI+  D   +I     H+ L +     +Q  GR GR    S C L Y P
Sbjct: 282 ATVAFGMGINKPDVRFVI-----HYSLPKSMESYYQESGRAGRDGLPSECHLFYAP 332