RPSBLAST alignment for GI: 254780945 and conserved domain: COG1111

>gnl|CDD|31308 COG1111, MPH1, ERCC4-like helicases [DNA replication, recombination, and repair]. Length = 542

 Score = 54.5 bits (131), Expect = 1e-07
 Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 27/201 (13%)

Query: 303 GSGKTLVALIAMAAA-VEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQ 361
           G GKT +A + +A      GG+ + +AP   L  QH EF +K T   +  +  +TG +  
Sbjct: 39  GLGKTFIAAMVIANRLRWFGGKVLFLAPTKPLVLQHAEFCRKVTGIPEDEIAALTGEVRP 98

Query: 362 AHRRKALERIAHGQAHIIIGT-HALFQD----SIQYYKLILVIVDEQHRFG-----VQQR 411
             R +   +       + + T   +  D     I    + L+I DE HR       V   
Sbjct: 99  EEREELWAK-----KKVFVATPQVVENDLKAGRIDLDDVSLLIFDEAHRAVGNYAYVFVA 153

Query: 412 LKLTQKATAPHVLLMTATP-IPRTLVLTSLGDIDISKI---TEKPAGRKP----IKTVII 463
            +  + A  P +L +TA+P      +   + ++ I K+   TE+    +P    IK   I
Sbjct: 154 KEYLRSAKNPLILGLTASPGSDLEKIQEVVENLGIEKVEVRTEEDPDVRPYVKKIKVEWI 213

Query: 464 PI---NRIDEVIERLKVVLSE 481
            +     I E+ + L+  L  
Sbjct: 214 KVDLPEEIKEIRDLLRDALKP 234