RPSBLAST alignment for GI: 254780945 and conserved domain: COG1200
>gnl|CDD|31393 COG1200, RecG, RecG-like helicase [DNA replication, recombination, and repair / Transcription]. Length = 677
Score = 726 bits (1876), Expect = 0.0
Identities = 315/691 (45%), Positives = 443/691 (64%), Gaps = 20/691 (2%)
Query: 1 MRPSFLNPLFAPLSTFRGVGKKYSLFLSKIINCGNANETRFIDLLFYHPSSFIDRHYRPK 60
M S L+P F PLST +G+G K + L K+ DLL Y P + DR P
Sbjct: 1 MMLSLLDP-FVPLSTLKGIGPKTAEKLKKL------GIHTVQDLLLYLPRRYEDRTLLPG 53
Query: 61 ISEISEERIVTITGYISQHSSFQLQKRRPYKILLNDGTGEITLLFFYRKTEMLKNVFFEG 120
I+E IVTI G + H F KR+ K+ L+DGTG +TL+FF LK G
Sbjct: 54 IAEARPGEIVTIEGTVLSHEKFPFGKRKLLKVTLSDGTGVLTLVFFNFPA-YLKKKLKVG 112
Query: 121 RKITVTGKIKKLKNRIIMVHPHYIFHNSQDVNFPLIEAVYSLPTGLSVDLFKKIIVEALS 180
++ V GK+K+ K + + HP YI ++ + VY L GL +K+I +AL
Sbjct: 113 ERVIVYGKVKRFKGGLQITHPEYIVNDDGSELEERLTPVYPLTEGLKQKTLRKLIQQALE 172
Query: 181 RLP-VLPEWIEKDLLQKKSFPSIAEAFNIIHNPRKAKDFEWTSPARERLAYDELLAGQIA 239
LP L E + ++LL+K PS+ EA +H P KD E AR RLA++ELLA Q++
Sbjct: 173 VLPSELEELLPEELLEKYGLPSLDEALRTLHFP---KDEEDLKRARRRLAFEELLALQLS 229
Query: 240 LLLMRKQFKKEIGIPINVEGKIAQKILRNIPFSPTKSQESAIKDILQDMSQKNRMLRILQ 299
LLL R + +K GIP+ G++ K L +PF T +Q+ IK+IL D++ M R+LQ
Sbjct: 230 LLLRRAKRQKRSGIPLPANGELLAKFLAALPFKLTNAQKRVIKEILADLASPVPMNRLLQ 289
Query: 300 GDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNM 359
GDVGSGKT+VAL+AM AA+EAG QA +MAP ILA+QHYE ++K+ + I V ++TG++
Sbjct: 290 GDVGSGKTVVALLAMLAAIEAGYQAALMAPTEILAEQHYESLRKWLEPLGIRVALLTGSL 349
Query: 360 PQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVDEQHRFGVQQRLKLTQKA- 418
R++ LE++A G+ I++GTHAL QD ++++ L LVI+DEQHRFGV QRL L +K
Sbjct: 350 KGKARKEILEQLASGEIDIVVGTHALIQDKVEFHNLGLVIIDEQHRFGVHQRLALREKGE 409
Query: 419 TAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVV 478
PHVL+MTATPIPRTL LT+ GD+D+S I E P GRKPI TV+IP R EV ER++
Sbjct: 410 QNPHVLVMTATPIPRTLALTAFGDLDVSIIDELPPGRKPITTVVIPHERRPEVYERIREE 469
Query: 479 LSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFT-SSIAIIHGRMSDIDKESVMDSF 537
+++G++AY +CP IEE ++ ++ E + L + ++HGRM +K++VM++F
Sbjct: 470 IAKGRQAYVVCPLIEESEKLELQAAEELYEELKSFLPELKVGLVHGRMKPAEKDAVMEAF 529
Query: 538 KNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYH 597
K G +L+ATTVIEVG+DV +A++++IENAE FGLAQLHQLRGRVGRG+ S C+LLY
Sbjct: 530 KEGEIDILVATTVIEVGVDVPNATVMVIENAERFGLAQLHQLRGRVGRGDLQSYCVLLYK 589
Query: 598 PPLSKNSYTRLSVLKNTEDGFLIAEEDLKQRKEGEILGIKQSGMPKFLIAQPELHDSLLE 657
PPLS+ + RL +++ T DGF+IAEEDLK R GE+LG +QSG+P+F +A +LE
Sbjct: 590 PPLSEVAKQRLKIMRETTDGFVIAEEDLKLRGPGELLGTRQSGLPEFRVADLVRDYDILE 649
Query: 658 IARKDAKHILTQDPDLTSVRGQSIRILLYLY 688
ARKDA +L++DP G+++ LL +
Sbjct: 650 EARKDAAKLLSRDP------GEALEALLKRF 674