RPSBLAST alignment for GI: 254780945 and conserved domain: COG1200

>gnl|CDD|31393 COG1200, RecG, RecG-like helicase [DNA replication, recombination, and repair / Transcription]. Length = 677
 Score =  726 bits (1876), Expect = 0.0
 Identities = 315/691 (45%), Positives = 443/691 (64%), Gaps = 20/691 (2%)

Query: 1   MRPSFLNPLFAPLSTFRGVGKKYSLFLSKIINCGNANETRFIDLLFYHPSSFIDRHYRPK 60
           M  S L+P F PLST +G+G K +  L K+            DLL Y P  + DR   P 
Sbjct: 1   MMLSLLDP-FVPLSTLKGIGPKTAEKLKKL------GIHTVQDLLLYLPRRYEDRTLLPG 53

Query: 61  ISEISEERIVTITGYISQHSSFQLQKRRPYKILLNDGTGEITLLFFYRKTEMLKNVFFEG 120
           I+E     IVTI G +  H  F   KR+  K+ L+DGTG +TL+FF      LK     G
Sbjct: 54  IAEARPGEIVTIEGTVLSHEKFPFGKRKLLKVTLSDGTGVLTLVFFNFPA-YLKKKLKVG 112

Query: 121 RKITVTGKIKKLKNRIIMVHPHYIFHNSQDVNFPLIEAVYSLPTGLSVDLFKKIIVEALS 180
            ++ V GK+K+ K  + + HP YI ++        +  VY L  GL     +K+I +AL 
Sbjct: 113 ERVIVYGKVKRFKGGLQITHPEYIVNDDGSELEERLTPVYPLTEGLKQKTLRKLIQQALE 172

Query: 181 RLP-VLPEWIEKDLLQKKSFPSIAEAFNIIHNPRKAKDFEWTSPARERLAYDELLAGQIA 239
            LP  L E + ++LL+K   PS+ EA   +H P   KD E    AR RLA++ELLA Q++
Sbjct: 173 VLPSELEELLPEELLEKYGLPSLDEALRTLHFP---KDEEDLKRARRRLAFEELLALQLS 229

Query: 240 LLLMRKQFKKEIGIPINVEGKIAQKILRNIPFSPTKSQESAIKDILQDMSQKNRMLRILQ 299
           LLL R + +K  GIP+   G++  K L  +PF  T +Q+  IK+IL D++    M R+LQ
Sbjct: 230 LLLRRAKRQKRSGIPLPANGELLAKFLAALPFKLTNAQKRVIKEILADLASPVPMNRLLQ 289

Query: 300 GDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNM 359
           GDVGSGKT+VAL+AM AA+EAG QA +MAP  ILA+QHYE ++K+ +   I V ++TG++
Sbjct: 290 GDVGSGKTVVALLAMLAAIEAGYQAALMAPTEILAEQHYESLRKWLEPLGIRVALLTGSL 349

Query: 360 PQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVDEQHRFGVQQRLKLTQKA- 418
               R++ LE++A G+  I++GTHAL QD ++++ L LVI+DEQHRFGV QRL L +K  
Sbjct: 350 KGKARKEILEQLASGEIDIVVGTHALIQDKVEFHNLGLVIIDEQHRFGVHQRLALREKGE 409

Query: 419 TAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVV 478
             PHVL+MTATPIPRTL LT+ GD+D+S I E P GRKPI TV+IP  R  EV ER++  
Sbjct: 410 QNPHVLVMTATPIPRTLALTAFGDLDVSIIDELPPGRKPITTVVIPHERRPEVYERIREE 469

Query: 479 LSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFT-SSIAIIHGRMSDIDKESVMDSF 537
           +++G++AY +CP IEE ++   ++  E +  L        + ++HGRM   +K++VM++F
Sbjct: 470 IAKGRQAYVVCPLIEESEKLELQAAEELYEELKSFLPELKVGLVHGRMKPAEKDAVMEAF 529

Query: 538 KNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYH 597
           K G   +L+ATTVIEVG+DV +A++++IENAE FGLAQLHQLRGRVGRG+  S C+LLY 
Sbjct: 530 KEGEIDILVATTVIEVGVDVPNATVMVIENAERFGLAQLHQLRGRVGRGDLQSYCVLLYK 589

Query: 598 PPLSKNSYTRLSVLKNTEDGFLIAEEDLKQRKEGEILGIKQSGMPKFLIAQPELHDSLLE 657
           PPLS+ +  RL +++ T DGF+IAEEDLK R  GE+LG +QSG+P+F +A       +LE
Sbjct: 590 PPLSEVAKQRLKIMRETTDGFVIAEEDLKLRGPGELLGTRQSGLPEFRVADLVRDYDILE 649

Query: 658 IARKDAKHILTQDPDLTSVRGQSIRILLYLY 688
            ARKDA  +L++DP      G+++  LL  +
Sbjct: 650 EARKDAAKLLSRDP------GEALEALLKRF 674