RPSBLAST alignment for GI: 254780945 and conserved domain: COG4581

>gnl|CDD|34219 COG4581, COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair]. Length = 1041

 Score = 45.0 bits (106), Expect = 7e-05
 Identities = 49/256 (19%), Positives = 94/256 (36%), Gaps = 40/256 (15%)

Query: 267 RNIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVI 326
           R  PF     Q+ AI  + +  S       ++     SGKT+VA  A+A A+  G + + 
Sbjct: 114 REYPFELDPFQQEAIAILERGES------VLVCAPTSSGKTVVAEYAIALALRDGQRVIY 167

Query: 327 MAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHAL- 385
            +PI  L+ Q Y  +     +   +V ++TG+            I      +++ T  L 
Sbjct: 168 TSPIKALSNQKYRDLLAKFGDVADMVGLMTGD----------VSINPDAPCLVMTTEILR 217

Query: 386 ---FQDSIQYYKLILVIVDEQHRFGVQQR-----LKLTQKATAPHVLLMTATPIPRTLVL 437
              ++ S     +  V+ DE H  G ++R       +         + ++AT +P     
Sbjct: 218 NMLYRGSESLRDIEWVVFDEVHYIGDRERGVVWEEVIILLPDHVRFVFLSAT-VPNAEEF 276

Query: 438 TSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVVLSEGKKAYWICPQIEEKKE 497
                  I ++  +P        V+   +R       L+  +  GK  + +  + ++   
Sbjct: 277 ----AEWIQRVHSQP------IHVVSTEHRPVP----LEHFVYVGKGLFDLVDEKKKFNA 322

Query: 498 SNFRSVVERFNSLHEH 513
            NF S     +   E 
Sbjct: 323 ENFPSANRSLSCFSEK 338