RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0344

>gnl|CDD|35565 KOG0344, KOG0344, KOG0344, ATP-dependent RNA helicase [RNA processing and modification]. Length = 593

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 51/283 (18%), Positives = 92/283 (32%), Gaps = 52/283 (18%)

Query: 294 MLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQN----TQ 349
              + Q  V  G     L+A+   V +G       P  ++  Q  E  K+  +       
Sbjct: 358 NETVDQELVFCGSEKGKLLALRQLVASG-----FKPPVLIFVQSKERAKQLFEELEIYDN 412

Query: 350 IIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVDEQHRFGVQ 409
           I V++I G   Q  R + +ER   G+  ++I T  L    I +  + LVI  +  +  + 
Sbjct: 413 INVDVIHGERSQKQRDETMERFRIGKIWVLICT-DLLARGIDFKGVNLVINYDFPQSDLS 471

Query: 410 QRLKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIPINRID 469
                       H +  T         +T   D D       P  R   + +      + 
Sbjct: 472 Y----------IHRIGRTGRAGRSGKAITFYTDQD------MPRIRSIAEVMEQSGCEVP 515

Query: 470 EVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDID 529
           E I  +K +                KK+   ++  +R             I   +     
Sbjct: 516 EKIMGIKKLSR-------------LKKKKLLKAASKR-----------EEISTKKFPKYK 551

Query: 530 KESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFG 572
           K+  ++  K+   K+L      E+ +         +EN E+FG
Sbjct: 552 KKEALEKAKSQEKKIL--KQETEIAVKKEGKIKKKVENKENFG 592