RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0346
>gnl|CDD|35567 KOG0346, KOG0346, KOG0346, RNA helicase [RNA processing and modification]. Length = 569
Score = 46.5 bits (110), Expect = 2e-05
Identities = 48/179 (26%), Positives = 71/179 (39%), Gaps = 32/179 (17%)
Query: 273 PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAM---------AAAVEAGGQ 323
PT Q SAI L+ K+ + R GSGKT LI + E G
Sbjct: 42 PTLIQSSAIPLALE---GKDVVAR---ARTGSGKTAAYLIPLLQKLLAEKKTNDGEQGPS 95
Query: 324 AVIMAPIGILAQQHYEFIKKYTQNTQIIVEI--ITGNMPQAHRRKALERIAHGQAHIIIG 381
AVI+ P LAQQ Y+ I+K + + + +M + AL I++
Sbjct: 96 AVILVPTKELAQQVYKVIEKLVEYCSKDLRAINLASSMSDSVNSVALM----DLPDIVVA 151
Query: 382 THA-----LFQDSIQYYKLI-LVIVDEQH---RFGVQQRLKLTQKATAP--HVLLMTAT 429
T A L ++Y + ++VDE FG ++ LK + LM+AT
Sbjct: 152 TPAKLLRHLAAGVLEYLDSLSFLVVDEADLLLSFGYEEDLKKLRSHLPRIYQCFLMSAT 210