RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0347
>gnl|CDD|35568 KOG0347, KOG0347, KOG0347, RNA helicase [RNA processing and modification]. Length = 731
Score = 43.1 bits (101), Expect = 3e-04
Identities = 83/417 (19%), Positives = 140/417 (33%), Gaps = 83/417 (19%)
Query: 266 LRNIPFS-PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQ- 323
L N+ FS PT+ Q + ++ ++ + + GSGKTL I + +
Sbjct: 196 LSNLGFSRPTEIQSLVLPAAIRG-----KVDILGAAETGSGKTLAFGIPIVERLLESSDD 250
Query: 324 ---------------AVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKAL 368
A+++ P LA Q + +K + TQI V ITG + +
Sbjct: 251 SQELSNTSAKYVKPIALVVTPTRELAHQVKQHLKAIAEKTQIRVASITGGLAVQKQ---- 306
Query: 369 ERIAHGQAHIIIGTHALFQDSIQ--------YYKLILVIVDEQHRF----------GVQQ 410
+R+ + + I++ T + I+ + K+ +++DE R + +
Sbjct: 307 QRLLNQRPDIVVATPGRLWELIEEDNTHLGNFKKVKCLVLDEADRMVEKGHFEELSKLLK 366
Query: 411 RLKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPI-----------K 459
L QK L+ +AT TLVL K ++ I K
Sbjct: 367 HLNEEQKNRQRQTLVFSAT---LTLVLQQPLSSSRKKKDKEDELNAKIQHLMKKIGFRGK 423
Query: 460 TVIIPINRIDEVIERLKVVLSEGKKAYWICPQIEEKKE---------------SNFRSVV 504
II + L L E CP +E+ N V
Sbjct: 424 PKIIDLTPQSATASTLTESLIE-------CPPLEKDLYLYYFLTRYPGRTLVFCNSIDCV 476
Query: 505 ERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIII 564
+R L + +H M + ++ FK +LIAT V G+D+ +I
Sbjct: 477 KRLTVLLNNLDIPPLPLHASMIQKQRLKNLEKFKQSPSGVLIATDVAARGLDIPGVQHVI 536
Query: 565 IENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRL-SVLKNTEDGFLI 620
+H+ GR R ++L P +L LK ED +
Sbjct: 537 HYQVPRTSEIYVHR-SGRTARANSEGVSVMLCGPQ-EVGPLKKLCKTLKKKEDLPIF 591