RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0347

>gnl|CDD|35568 KOG0347, KOG0347, KOG0347, RNA helicase [RNA processing and modification]. Length = 731
 Score = 43.1 bits (101), Expect = 3e-04
 Identities = 83/417 (19%), Positives = 140/417 (33%), Gaps = 83/417 (19%)

Query: 266 LRNIPFS-PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQ- 323
           L N+ FS PT+ Q   +   ++      ++  +   + GSGKTL   I +   +      
Sbjct: 196 LSNLGFSRPTEIQSLVLPAAIRG-----KVDILGAAETGSGKTLAFGIPIVERLLESSDD 250

Query: 324 ---------------AVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKAL 368
                          A+++ P   LA Q  + +K   + TQI V  ITG +    +    
Sbjct: 251 SQELSNTSAKYVKPIALVVTPTRELAHQVKQHLKAIAEKTQIRVASITGGLAVQKQ---- 306

Query: 369 ERIAHGQAHIIIGTHALFQDSIQ--------YYKLILVIVDEQHRF----------GVQQ 410
           +R+ + +  I++ T     + I+        + K+  +++DE  R            + +
Sbjct: 307 QRLLNQRPDIVVATPGRLWELIEEDNTHLGNFKKVKCLVLDEADRMVEKGHFEELSKLLK 366

Query: 411 RLKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPI-----------K 459
            L   QK      L+ +AT    TLVL         K  ++      I           K
Sbjct: 367 HLNEEQKNRQRQTLVFSAT---LTLVLQQPLSSSRKKKDKEDELNAKIQHLMKKIGFRGK 423

Query: 460 TVIIPINRIDEVIERLKVVLSEGKKAYWICPQIEEKKE---------------SNFRSVV 504
             II +         L   L E       CP +E+                   N    V
Sbjct: 424 PKIIDLTPQSATASTLTESLIE-------CPPLEKDLYLYYFLTRYPGRTLVFCNSIDCV 476

Query: 505 ERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIII 564
           +R   L  +       +H  M    +   ++ FK     +LIAT V   G+D+     +I
Sbjct: 477 KRLTVLLNNLDIPPLPLHASMIQKQRLKNLEKFKQSPSGVLIATDVAARGLDIPGVQHVI 536

Query: 565 IENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRL-SVLKNTEDGFLI 620
                      +H+  GR  R       ++L  P        +L   LK  ED  + 
Sbjct: 537 HYQVPRTSEIYVHR-SGRTARANSEGVSVMLCGPQ-EVGPLKKLCKTLKKKEDLPIF 591