RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0351

>gnl|CDD|35572 KOG0351, KOG0351, KOG0351, ATP-dependent DNA helicase [Replication, recombination and repair]. Length = 941

 Score = 51.6 bits (123), Expect = 6e-07
 Identities = 59/277 (21%), Positives = 100/277 (36%), Gaps = 56/277 (20%)

Query: 355 ITGNMPQAHRRKALERIAHGQAHIII------------GTHALFQDSIQYYKLILVIVDE 402
           ++     A R   L+++A+G   I I            G      D      L L ++DE
Sbjct: 334 LSSIQTAAERLAILQKLANGNPIIKILYVTPEKVVASEGLLESLADLYARGLLALFVIDE 393

Query: 403 QH---RFGVQ-----QRLKLTQKATAPH-VLLMTATPIPRTL--VLTSLGDIDISKITEK 451
            H   ++G       +RL L +        + +TAT   R    V+ SLG  +       
Sbjct: 394 AHCVSQWGHDFRPSYKRLGLLRIRFPGVPFIALTATATERVREDVIRSLGLRNPELFKSS 453

Query: 452 PAGRKPIKTVIIPINRIDEVIERLKVVLSEGKK-AYWICPQIEEKKES-------NFRSV 503
                         NR +   E   V     K     I  + + +            R  
Sbjct: 454 F-------------NRPNLKYE---VSPKTDKDALLDILEESKLRHPDQSGIIYCLSRKE 497

Query: 504 VERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASII 563
            E+ +++      S A  H  +   ++E+V  ++ +   ++++AT    +GID  D   +
Sbjct: 498 CEQVSAVLRSLGKSAAFYHAGLPPKERETVQKAWMSDKIRVIVATVAFGMGIDKPDVRFV 557

Query: 564 IIENAEHFGLAQL----HQLRGRVGRGEEISSCILLY 596
           I     H+ L +     +Q  GR GR    SSC+LLY
Sbjct: 558 I-----HYSLPKSFEGYYQEAGRAGRDGLPSSCVLLY 589