HHsearch alignment of GI: 254780946 and MMDB domain: 1x6i_A_
>1x6i_A (A:) Hypothetical protein YGFY; structural genomics, transcriptional regulation, structure 2 function project, S2F, unknown function; 1.20A {Escherichia coli} PDB: 1x6j_A
Probab=99.94 E-value=7.5e-27 Score=175.62 Aligned_cols=87 Identities=24% Similarity=0.386 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 65899999999999740789999999999999820299999999999946891799999948899980675699999999
Q gi|254780946|r 3 KNMNLQCRKIVYRCWRRGTREMDLILGSFVDHFILELSSVELTMLESIIEEDDSNLFKWFTGMEKPPEYLRTPIFKKIYD 82 (98)
Q Consensus 3 ~~ld~~~krl~~Rs~rRG~kElDllL~~F~~~~~~~l~~~el~~f~~LL~~~D~dL~~wl~~~~~~p~~~~~~ii~~I~~ 82 (98)
++++.+++|++||||||||+|+|+|||+|++++++++|+++++.|+.||+++|+|||+|++|+++||+...++++++|++
T Consensus 2 e~~d~~~~r~l~~~~rRG~~ElDliL~~F~~~~~~~ls~~el~~fe~LL~~~D~dL~~wl~g~~~~p~~~~~~ii~~i~~ 81 (91)
T 1x6i_A 2 SHMDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQT 81 (91)
T ss_dssp -CCCTTCHHHHHHHTCCSSHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHTSCHHHHHHHHTTSSBCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 87566679898988104619999999999999998799999999999983990999999948999999999999999999
Q ss_pred HHHHHHH
Q ss_conf 9982277
Q gi|254780946|r 83 YYSNNLD 89 (98)
Q Consensus 83 f~~~~~~ 89 (98)
|++++..
T Consensus 82 ~~~~~~~ 88 (91)
T 1x6i_A 82 RNRERGP 88 (91)
T ss_dssp HHHHHSC
T ss_pred HHHCCCC
T ss_conf 7060388