HHsearch alignment for GI: 254780947 and conserved domain: KOG0350

>KOG0350 consensus.
Probab=99.44  E-value=4.5e-10  Score=96.39  Aligned_cols=312  Identities=20%  Similarity=0.273  Sum_probs=207.7

Q ss_pred             HHHHHHHHHHHHHCCCCC---CCCEEEECCCCCCHHHH---HHH-HHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCC
Q ss_conf             448999999987605988---54144316654324899---999-99875112754999824366555899999986067
Q gi|254780947|r  628 EDQEKAIDAVIQDLSSGR---LMDRLICGDVGFGKTEI---ALR-AAFIAVMNGLQVAVIAPTTLLVRQHFRLFSERFQG  700 (1187)
Q Consensus       628 ~DQ~~AI~eV~~Dmes~~---PMDRLiCGDVGfGKTEV---A~R-Aafkav~~gkQvavlvPTTiLa~QH~~tf~~Rf~~  700 (1187)
T Consensus       162 PVQ~aVlp~ll~~~~~p~~~r~rDIcV~ApTGSGKTLaY~iPIVQ~L~~R~v~~LRavVivPtr~L~~QV~~~f~~~~~~  241 (620)
T KOG0350         162 PVQYAVLPSLLEEIRSPPPSRPRDICVNAPTGSGKTLAYVIPIVQLLSSRPVKRLRAVVIVPTRELALQVYDTFKRLNSG  241 (620)
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCC
T ss_conf             05888888999861479998877547755789884566513789997038734057999954799999999999985668


Q ss_pred             CCCCEEEECCCCCC-HHHHHHHHHHCCCCCEEEEECHHHH------CCCCCCCCCCEEEEECHHHHHHHHHHHH------
Q ss_conf             89833541066630-2567777531225760898520654------2785202365699722233008889988------
Q gi|254780947|r  701 FSVRIASISRFVQT-KEAALHKKSITEGQVDIVIGTHALL------NPKITFANLGLIIIDEEQHFGVKHKEAL------  767 (1187)
Q Consensus       701 ~pv~i~~lsRf~~~-~e~~~i~~~l~~G~idiviGTH~ll------~~~v~f~~LgLliiDEEqrFGV~~Ke~l------  767 (1187)
T Consensus       242 tgL~V~~~sgq~sl~~E~~qL~~~~~~~~~DIlVaTPGRLVDHl~~~k~f~Lk~LrfLVIDEADRll~qsfQ~Wl~~v~~  321 (620)
T KOG0350         242 TGLAVCSLSGQNSLEDEARQLASDPPECRIDILVATPGRLVDHLNNTKSFDLKHLRFLVIDEADRLLDQSFQEWLDTVMS  321 (620)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHCCCCCCCCHHHCEEEEECHHHHHHHHHHHHHHHHHHH
T ss_conf             86598860145405789999725997654366973726888860489875644535777525778999999988999999


Q ss_pred             --HHC---CCCCCEEEEECCCCCHHHHHHHHC-----------------------CC---------------CCCEEECC
Q ss_conf             --631---678848999535340889999712-----------------------22---------------54122015
Q gi|254780947|r  768 --KET---HTGVHVLTLSATPIPRTLQLAITG-----------------------VR---------------ELSLISMP  804 (1187)
Q Consensus       768 --k~~---~~~vdvLtlsATPIPRTL~msl~g-----------------------~r---------------d~S~i~tp  804 (1187)
T Consensus       322 ~~~~~k~~~~~~nii~~~~~~~pt~~~e~~t~~~~~~~~l~kL~~satLsqdP~Kl~~l~l~~Prl~~v~~~~~~ryslp  401 (620)
T KOG0350         322 LCKTMKRVACLDNIIRQRQAPQPTVLSELLTKLGKLYPPLWKLVFSATLSQDPSKLKDLTLHIPRLFHVSKPLIGRYSLP  401 (620)
T ss_pred             HHCCCHHHCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHCCHHHHHHHHCCCCCEEEEECCCCEEEECC
T ss_conf             83774010471544410146774005877741277675267653013330496887653327983588622543266157


Q ss_pred             CCC-CCCEEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCC--CCEEEEECCCCHHHHHHHHHH
Q ss_conf             788-77537999857978989999989871885999826446928899999861654--648886134674789999999
Q gi|254780947|r  805 PIN-RIACRTSISIFDPLVVRETLMREYYRGGQSFYVCPRLSDLEKCYTFLQSEVPE--LKIAMAHGQMSPKNLEDKMNA  881 (1187)
Q Consensus       805 P~~-R~~v~T~v~~~~~~~i~~ai~rEl~RgGQvf~v~nrv~~i~~~~~~l~~l~p~--~~i~vaHGqm~~~~le~~m~~  881 (1187)
T Consensus       402 ~~l~~~~vv~~~~-~kpl~~~~lI--~~~k~~r~lcf~~S~~sa~Rl~~~L~v~~~~~~~~~s~~t~~l~~k~r~k~l~~  478 (620)
T KOG0350         402 SSLSHRLVVTEPK-FKPLAVYALI--TSNKLNRTLCFVNSVSSANRLAHVLKVEFCSDNFKVSEFTGQLNGKRRYKMLEK  478 (620)
T ss_pred             HHHHHCEEECCCC-CCHHHHHHHH--HHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             5542133420235-5437699999--774010489995246889999999999862644025565234438899999998


Q ss_pred             HHCCCCCEEEECCCEECCCCCCCCCEEEEECHHHCCCCHHHHHH-HHCCCCCCCCEEEEEECCC
Q ss_conf             96388757976102003633223326676250235886045532-2103567673699996688
Q gi|254780947|r  882 FYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMFGLAQLYQLR-GRVGRSKIASFALFLLPEN  944 (1187)
Q Consensus       882 F~~~~~dvLv~TtIiEsGlDip~aNTiii~~ad~~GLaqlyQlr-GRVGRs~~~ayayl~~~~~  944 (1187)
T Consensus       479 f~~g~i~vLIcSD~laRGiDv~~v~~VINYd~P~~--~ktyVHR~GRTARAgq~G~a~tll~~~  540 (620)
T KOG0350         479 FAKGDINVLICSDALARGIDVNDVDNVINYDPPAS--DKTYVHRAGRTARAGQDGYAITLLDKH  540 (620)
T ss_pred             HHCCCCEEEEEHHHHHCCCCCCCCCEEEECCCCCH--HHHHHHHHCCCCCCCCCCEEEEEECCC
T ss_conf             75389529985236554776024604763589812--657877602210056774478963155