HHsearch alignment for GI: 254780947 and conserved domain: KOG0389
>KOG0389 consensus.
Probab=94.45 E-value=0.43 Score=27.14 Aligned_cols=224 Identities=18% Similarity=0.309 Sum_probs=137.5
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHC----CCCEEEEEECHHHHHHHHHHHHHHHHCCC
Q ss_conf 87448999999987605988541443166543248999999987511----27549998243665558999999860678
Q gi|254780947|r 626 ETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIAVM----NGLQVAVIAPTTLLVRQHFRLFSERFQGF 701 (1187)
Q Consensus 626 ET~DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAafkav~----~gkQvavlvPTTiLa~QH~~tf~~Rf~~~ 701 (1187)
T Consensus 400 LkdYQlvGvNWL~--Llyk~~l~gILADEMGLGKTiQvI--aFlayLkq~g~~gpHLVVvPsSTl-----eNWlrEf~kw 470 (941)
T KOG0389 400 LKDYQLVGVNWLL--LLYKKKLNGILADEMGLGKTIQVI--AFLAYLKQIGNPGPHLVVVPSSTL-----ENWLREFAKW 470 (941)
T ss_pred CCCHHHHHHHHHH--HHHHCCCCCEEHHHCCCCCHHHHH--HHHHHHHHCCCCCCCEEEECCHHH-----HHHHHHHHHH
T ss_conf 3422202289999--999742330532220576334899--999999972999983799203168-----8899999975
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHCCC--CCEEEEECHHHHC---CCCCC---CCCCEEEEECHHHHHHHHHHHHHHC---
Q ss_conf 98335410666302567777531225--7608985206542---78520---2365699722233008889988631---
Q gi|254780947|r 702 SVRIASISRFVQTKEAALHKKSITEG--QVDIVIGTHALLN---PKITF---ANLGLIIIDEEQHFGVKHKEALKET--- 770 (1187)
Q Consensus 702 pv~i~~lsRf~~~~e~~~i~~~l~~G--~idiviGTH~ll~---~~v~f---~~LgLliiDEEqrFGV~~Ke~lk~~--- 770 (1187)
T Consensus 471 CPsl~Ve~YyGSq~ER~~lR~~i~~~~~~ydVllTTY~la~~~kdDRsflk~~~~n~viyDEgHmLKN~~SeRy~~LM~I 550 (941)
T KOG0389 471 CPSLKVEPYYGSQDERRELRERIKKNKDDYDVLLTTYNLAASSKDDRSFLKNQKFNYVIYDEGHMLKNRTSERYKHLMSI 550 (941)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCHHHHHCCCHHHHHHHCCC
T ss_conf 97528774157689999999998616888528998721103886778999866666799613265421334988875064
Q ss_pred CCCCCEEEEECCCCCHHHH--HHH----------HCCCCCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHH--HHHCCE
Q ss_conf 6788489995353408899--997----------12225412201578877537999857978989999989--871885
Q gi|254780947|r 771 HTGVHVLTLSATPIPRTLQ--LAI----------TGVRELSLISMPPINRIACRTSISIFDPLVVRETLMRE--YYRGGQ 836 (1187)
Q Consensus 771 ~~~vdvLtlsATPIPRTL~--msl----------~g~rd~S~i~tpP~~R~~v~T~v~~~~~~~i~~ai~rE--l~RgGQ 836 (1187)
T Consensus 551 ~An~-RlLLTGTPLQNNL~ELiSLL~FvlP~vF~~~~~dl~~if~-------~k~~~----d~d~e~~~l~qerIsrAK~ 618 (941)
T KOG0389 551 NANF-RLLLTGTPLQNNLKELISLLAFVLPKVFDSSMEDLDVIFK-------AKKTS----DGDIENALLSQERISRAKT 618 (941)
T ss_pred CCCC-EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH-------CCCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 6553-5885187420129999999999745755322247999982-------46776----4304677889999999997
Q ss_pred EE--EEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
Q ss_conf 99--98264469288999998616546488861346747899
Q gi|254780947|r 837 SF--YVCPRLSDLEKCYTFLQSEVPELKIAMAHGQMSPKNLE 876 (1187)
Q Consensus 837 vf--~v~nrv~~i~~~~~~l~~l~p~~~i~vaHGqm~~~~le 876 (1187)
T Consensus 619 im~PFILRR-----~K~qVL~~LPpK~~-~Ie~c~mse~Q~~ 654 (941)
T KOG0389 619 IMKPFILRR-----LKSQVLKQLPPKIQ-RIEYCEMSEKQKQ 654 (941)
T ss_pred HHHHHHHHH-----HHHHHHHHCCCCCC-EEEEEECCHHHHH
T ss_conf 542788999-----89989874697432-5676424638999