HHsearch alignment for GI: 254780947 and conserved domain: KOG0947
>KOG0947 consensus.
Probab=98.24 E-value=0.00088 Score=47.87 Aligned_cols=329 Identities=24% Similarity=0.324 Sum_probs=217.8
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 98998488888744899999998760598854144316654324899999998751127549998243665558999999
Q gi|254780947|r 616 SQFIKRFPHVETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFS 695 (1187)
Q Consensus 616 ~eFe~~FpyeET~DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAafkav~~gkQvavlvPTTiLa~QH~~tf~ 695 (1187)
T Consensus 288 pe~a~~~pFelD~FQk~Ai~~ler----g~--SVFVAAHTSAGKTvVAEYAialaq~h~TR~iYTSPIKALSNQKfRDFk 361 (1248)
T KOG0947 288 PEMALIYPFELDTFQKEAIYHLER----GD--SVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFK 361 (1248)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHC----CC--EEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHCCCHHHHHH
T ss_conf 068861887766789999999972----78--179971377884369999999988635515752634654001578887
Q ss_pred HHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEECHHHHC------CCCCCCCCCEEEEECHHH-----HHHHHH
Q ss_conf 860678983354106663025677775312257608985206542------785202365699722233-----008889
Q gi|254780947|r 696 ERFQGFSVRIASISRFVQTKEAALHKKSITEGQVDIVIGTHALLN------PKITFANLGLIIIDEEQH-----FGVKHK 764 (1187)
Q Consensus 696 ~Rf~~~pv~i~~lsRf~~~~e~~~i~~~l~~G~idiviGTH~ll~------~~v~f~~LgLliiDEEqr-----FGV~~K 764 (1187)
T Consensus 362 ~tF~Dvg----LlTGDv---q---i-----nPeAsCLIMTTEILRsMLYrgadl-iRDvE~VIFDEVHYiND~eRGvVWE 425 (1248)
T KOG0947 362 ETFGDVG----LLTGDV---Q---I-----NPEASCLIMTTEILRSMLYRGADL-IRDVEFVIFDEVHYINDVERGVVWE 425 (1248)
T ss_pred HHCCCCC----EEECCE---E---E-----CCCCCEEEEHHHHHHHHHHCCCCH-HHCCCEEEEEEEEECCCCCCCCCCE
T ss_conf 7426665----451443---3---2-----777546765699999987515543-2113369874035414413562210
Q ss_pred HHHHHCCCCCCEEEEECCCCCHHHHHH-HHC---CCCCCEEECCCCCCCCEEEEEEECCHHH-------------HHHHH
Q ss_conf 988631678848999535340889999-712---2254122015788775379998579789-------------89999
Q gi|254780947|r 765 EALKETHTGVHVLTLSATPIPRTLQLA-ITG---VRELSLISMPPINRIACRTSISIFDPLV-------------VRETL 827 (1187)
Q Consensus 765 e~lk~~~~~vdvLtlsATPIPRTL~ms-l~g---~rd~S~i~tpP~~R~~v~T~v~~~~~~~-------------i~~ai 827 (1187)
T Consensus 426 EViIMlP~HV~~IlLSAT-VPN~~EFA~WIGRtK~K~IyViST~-kRPVPLEh~l~t~~~l~kiidq~g~fl~~~~~~a~ 503 (1248)
T KOG0947 426 EVIIMLPRHVNFILLSAT-VPNTLEFADWIGRTKQKTIYVISTS-KRPVPLEHYLYTKKSLFKIIDQNGIFLLKGIKDAK 503 (1248)
T ss_pred EEEEECCCCCEEEEEECC-CCCHHHHHHHHHHCCCCEEEEEECC-CCCCCEEEEEEECCCEEHHHCCCCHHHHHCCHHHH
T ss_conf 122532554159998465-7981888887504048538997147-88643078998666310001544143553010111
Q ss_pred H--------------------HHHHHCC--------------------------------------EEEEEECCCC----
Q ss_conf 9--------------------8987188--------------------------------------5999826446----
Q gi|254780947|r 828 M--------------------REYYRGG--------------------------------------QSFYVCPRLS---- 845 (1187)
Q Consensus 828 ~--------------------rEl~RgG--------------------------------------Qvf~v~nrv~---- 845 (1187)
T Consensus 504 ~~~~~~ak~~~~~~~~~~~~rgs~~~ggk~~~~~g~~r~~~~~~nrr~~~~~l~lin~L~k~~lLP~VvFvFSkkrCde~ 583 (1248)
T KOG0947 504 DSLKKEAKFVDVEKSDARGGRGSQKRGGKTNYHNGGSRGSGIGKNRRKQPTWLDLINHLRKKNLLPVVVFVFSKKRCDEY 583 (1248)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHH
T ss_conf 12224444331325445466655466776788888766666543234444099999998522467669999735657899
Q ss_pred -----CH--------HHHHHH----HHHHCCCCC---------------EEEEECCCCHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf -----92--------889999----986165464---------------8886134674789999999963887579761
Q gi|254780947|r 846 -----DL--------EKCYTF----LQSEVPELK---------------IAMAHGQMSPKNLEDKMNAFYEGQYDVLLST 893 (1187)
Q Consensus 846 -----~i--------~~~~~~----l~~l~p~~~---------------i~vaHGqm~~~~le~~m~~F~~~~~dvLv~T 893 (1187)
T Consensus 584 a~~L~~~nL~~~~EKseV~lfl~k~~~rLk~~DR~LPQvl~m~~ll~RGiaVHH~GlLPivKE~VE~LFqrGlVKVLFAT 663 (1248)
T KOG0947 584 ADYLTNLNLTDSKEKSEVHLFLSKAVARLKGEDRNLPQVLSMRSLLLRGIAVHHGGLLPIVKEVVELLFQRGLVKVLFAT 663 (1248)
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCEEEEEEH
T ss_conf 99975557665212789999999999866854314337788999986140330366307899999999755854788641
Q ss_pred CCEECCCCCCCCCEEEEECHHH--------CCCCHHHHHHHHCCCCCCC--CEEEEEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 0200363322332667625023--------5886045532210356767--36999966888889889999999997255
Q gi|254780947|r 894 SIVESGLDLPKANTMIVQRADM--------FGLAQLYQLRGRVGRSKIA--SFALFLLPENRPLTAAAQKRLRILQSLNT 963 (1187)
Q Consensus 894 tIiEsGlDip~aNTiii~~ad~--------~GLaqlyQlrGRVGRs~~~--ayayl~~~~~~~l~~~a~kRL~ai~~~~~ 963 (1187)
T Consensus 664 ETFAMGVNMP-ARtvVF~Sl~KhDG~efR~L~PGEytQMAGRAGRRGlD~tGTVii~~~~~-vp~~a~l~~l-i~G~~~~ 740 (1248)
T KOG0947 664 ETFAMGVNMP-ARTVVFSSLRKHDGNEFRELLPGEYTQMAGRAGRRGLDETGTVIIMCKDS-VPSAATLKRL-IMGGPTR 740 (1248)
T ss_pred HHHHHHCCCC-CEEEEEEEHHHCCCCCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEECCC-CCCHHHHHHH-HCCCCCH
T ss_conf 0565116887-40677330001368642543870577641102445668676089996688-9998998657-5078720
Q ss_pred CCHHHHHH
Q ss_conf 65248999
Q gi|254780947|r 964 LGAGFQLA 971 (1187)
Q Consensus 964 lGsGf~iA 971 (1187)
T Consensus 741 L~SQFRlT 748 (1248)
T KOG0947 741 LESQFRLT 748 (1248)
T ss_pred HHHHHHHH
T ss_conf 04454457