HHsearch alignment for GI: 254780947 and conserved domain: PRK09401
>PRK09401 reverse gyrase; Reviewed.
Probab=97.14 E-value=0.0015 Score=46.15 Aligned_cols=139 Identities=22% Similarity=0.249 Sum_probs=63.8
Q ss_pred EEEEEHHHHHHHHHH---CC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 799666752111100---36--7888532343403489999999999999999999999988740156778784678989
Q gi|254780947|r 544 KLFVPVENIDLISRY---ST--EITTVTLDKLGGSAWKTRKANLKKRLEDLAQKLVDIAAKRAIHSVPPLMVSQDLYSQF 618 (1187)
Q Consensus 544 kLYVPv~~l~lIskY---g~--~~~~p~L~kLGg~~W~k~K~Kakk~v~diA~eLl~lyA~R~~~~g~~f~~d~~~~~eF 618 (1187)
T Consensus 668 ~~fiPvY~--~IkrC~~cg~qft~~~~~cP~Cgs~~i~-dk~~vv~aLR~lA~EvDeVyI--------ATDPDREG---- 732 (1176)
T PRK09401 668 GKFVPVYN--SIKRCRDCGHQFTDESDRCPRCGSTNID-DKEEIIEALRELALEVDEVLI--------ATDPDTEG---- 732 (1176)
T ss_pred CEEEEEEH--HHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHCCEEEE--------CCCCCCCC----
T ss_conf 80898416--6767753586012466668877888756-689999999999875598998--------78998563----
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHCCC--CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 9848888874489999999876059--88541443166543248999999987511275499982436655589999998
Q gi|254780947|r 619 IKRFPHVETEDQEKAIDAVIQDLSS--GRLMDRLICGDVGFGKTEIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFSE 696 (1187)
Q Consensus 619 e~~FpyeET~DQ~~AI~eV~~Dmes--~~PMDRLiCGDVGfGKTEVA~RAafkav~~gkQvavlvPTTiLa~QH~~tf~~ 696 (1187)
T Consensus 733 E-------------aIAwhl~~~Lk~~~~~ikRI~FhEI----Tk~AI~~Al~n---pr~I----d~nLV~AQ~aRRilD 788 (1176)
T PRK09401 733 E-------------KIAWDVYLLLSPYNPNIKRIEFHEV----TRRAILEALKN---PRDV----DENLVKAQIVRRIED 788 (1176)
T ss_pred H-------------HHHHHHHHHHCCCCCCCEEEEEECC----CHHHHHHHHHC---CCCC----CHHHHHHHHHHHHHH
T ss_conf 8-------------9999999983554898337998434----99999999849---5116----988889999999999
Q ss_pred HHCCCCCCEEEECCCCCCHHHHHH-HHHHCCCCCE
Q ss_conf 606789833541066630256777-7531225760
Q gi|254780947|r 697 RFQGFSVRIASISRFVQTKEAALH-KKSITEGQVD 730 (1187)
Q Consensus 697 Rf~~~pv~i~~lsRf~~~~e~~~i-~~~l~~G~id 730 (1187)
T Consensus 789 RlVGf~L---------Sp~Lwkk~~~~~LSAGRVQ 814 (1176)
T PRK09401 789 RWIGFEL---------SQKLQKRFGKRNLSAGRVQ 814 (1176)
T ss_pred HHHCCEE---------CHHHHHHCCCCCCCCCCCH
T ss_conf 8815722---------7999985588999866134