HHsearch alignment for GI: 254780947 and conserved domain: PRK12898
>PRK12898 secA preprotein translocase subunit SecA; Reviewed.
Probab=96.15 E-value=0.043 Score=34.90 Aligned_cols=241 Identities=14% Similarity=0.150 Sum_probs=119.7
Q ss_pred CCCHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCC-CCEEEEEECCCCCCCCCHHHCCCCCCCCHHCCCHHHHHHHHHH
Q ss_conf 850211699899999751146089626753222246-7337764146656682001001122220001858999999999
Q gi|254780947|r 325 IAPEKLYLNYQQFDALIQTTHKLVQMTAFNQQETAH-NRVVHLNAFPGKSWVPSAVQKIESQDNWESGGRFDKFLSHVAQ 403 (1187)
Q Consensus 325 l~Pe~Lyl~~~el~~ll~~~~~ii~l~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~g~l~~L~~~I~~ 403 (1187)
T Consensus 404 I~~e~qTlAsIT~QnfFR~Y~kLsGMTGTA~tea~Ef~~iY~L~Vv~IPTnrP~~R~D~~D~vy~t~~~K~~Aii~ei~~ 483 (673)
T PRK12898 404 LTDPRETLARITFQRFFRRYLRLAGMTGTAREVAGELWSVYGLPVVRIPTNRPSQRIVLPTEVFLTLAAKWAAVAARVRE 483 (673)
T ss_pred CCCCHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCEECCCEEECCHHHHHHHHHHHHHH
T ss_conf 78312356643499999856174057778575799999975997698689997301237985856999999999999999
Q ss_pred HHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCC----CCHHHH--HCCCCCCEEEEECCCCCCC--------C-CCC
Q ss_conf 986798299995894589999986776488733234----522455--2046684799981044687--------4-665
Q gi|254780947|r 404 QAQKGIKTIISASSQGALQHLIHLIESHGFKKIKKI----NTLTEI--NSLLKEEIAAVILPINQGF--------E-TKH 468 (1187)
Q Consensus 404 ~~k~g~rViI~a~s~~~~eRL~elL~e~gI~~~~~~----~~~~~~--~~~~~~~i~i~~~~L~~GF--------~-~~k 468 (1187)
T Consensus 484 ~~~~GqPVLVGT~SVe~SE~lS~~L~~~gi~h~VLNAk~~~~EA~IIA~AG~~GaVTIATNMAGRGTDI~Lg~~V~~~GG 563 (673)
T PRK12898 484 LHASGRPVLVGTRSVAASERLSALLREAGLPHQVLNAKQDAEEAAIVARAGQRGRITVATNMAGRGTDIKLEPEVAARGG 563 (673)
T ss_pred HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHCCC
T ss_conf 98679988998375899999999999869975664786668799999943999987970236789868476767886289
Q ss_pred EEEE-ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEE
Q ss_conf 6887-120013731112212222222110122444032351120355423311231014566666359999869987996
Q gi|254780947|r 469 MILV-TETDLLGKKIARRVVRKKNVHAQSFFDSSNIEEGAIIVHAEHGIGRFVRLYSIEVSGTFHDCLELHYADNAKLFV 547 (1187)
Q Consensus 469 l~vI-TE~EIFG~k~~~r~~rkk~~~~~~i~dl~eL~~GDyVVH~dHGIGrY~GLe~l~v~G~~~DyL~IeYa~~DkLYV 547 (1187)
T Consensus 564 LhVIgTerh-----eSrRIDn--QLrGRsG------RQGDP--------------------Gss~f~lSleDd-L~r~f~ 609 (673)
T PRK12898 564 LHVILTERH-----ESARIDR--QLAGRCG------RQGDP--------------------GSSEAILSLEDD-LLQQFL 609 (673)
T ss_pred CEEEECCCC-----CHHHHHH--HHHCCCC------CCCCC--------------------CCEEEEEEECHH-HHHHHC
T ss_conf 889843755-----1124565--6423544------68999--------------------851489981467-898757
Q ss_pred EHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6675211110036788853234340348999999999999999999999998
Q gi|254780947|r 548 PVENIDLISRYSTEITTVTLDKLGGSAWKTRKANLKKRLEDLAQKLVDIAAK 599 (1187)
Q Consensus 548 Pv~~l~lIskYg~~~~~p~L~kLGg~~W~k~K~Kakk~v~diA~eLl~lyA~ 599 (1187)
T Consensus 610 ~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~aQ~kvE~~nf~~Rk~ll~yD~v 661 (673)
T PRK12898 610 PLLGRGIARALAAAQGPGLSRGLGAALLRSAQRRAERRHARARRQLLHADEQ 661 (673)
T ss_pred CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0999999998189999841108999999999999999859999888778999