HHsearch alignment for GI: 254780947 and conserved domain: PRK12899

>PRK12899 secA preprotein translocase subunit SecA; Reviewed.
Probab=92.98  E-value=0.54  Score=26.43  Aligned_cols=194  Identities=19%  Similarity=0.245  Sum_probs=85.0

Q ss_pred             CHHHHCCCCCC--CCCCEEEEECH-------HHHH------HHHHHHHHHCCCCCCEEE---------------EECCCC
Q ss_conf             20654278520--23656997222-------3300------888998863167884899---------------953534
Q gi|254780947|r  735 THALLNPKITF--ANLGLIIIDEE-------QHFG------VKHKEALKETHTGVHVLT---------------LSATPI  784 (1187)
Q Consensus       735 TH~ll~~~v~f--~~LgLliiDEE-------qrFG------V~~Ke~lk~~~~~vdvLt---------------lsATPI  784 (1187)
T Consensus       435 A~~lf~kd~dYiV~d~~VvIVDEfTGR~m~gRr~sdGLHQAIEAKEgV~I~~e~qTlAsIT~QnfFR~Y~kLsGMTGTA-  513 (969)
T PRK12899        435 AHLLMERDVDYIVRDDQIVIIDEHTGRPQPGRRFSEGLHQAIEAKEHVTIRKESQTFATVTLQNFFRLYEKLAGMTGTA-  513 (969)
T ss_pred             HHHHHHCCCEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCC-
T ss_conf             9998835980899789089985677765889845521889999873898676761365536999983050430686574-


Q ss_pred             CHHHHHHHHCCCCCCEEECCCCC---C--CCEEEEEEECC--HHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf             08899997122254122015788---7--75379998579--78989999989871885999826446928899999861
Q gi|254780947|r  785 PRTLQLAITGVRELSLISMPPIN---R--IACRTSISIFD--PLVVRETLMREYYRGGQSFYVCPRLSDLEKCYTFLQSE  857 (1187)
Q Consensus       785 PRTL~msl~g~rd~S~i~tpP~~---R--~~v~T~v~~~~--~~~i~~ai~rEl~RgGQvf~v~nrv~~i~~~~~~l~~l  857 (1187)
T Consensus       514 -~tea~Ef~~IY~L~Vv~IPTNrP~~R~D~~D~vy~T~~~K~~Avi~eI-~~~h~~GqPVLVGT~SVe~SE~lS~~L~~~  591 (969)
T PRK12899        514 -ITESREFKEIYNLYVLQVPTFKPCLRIDHNDEFYMTEREKYHAIVNEI-ASIHRSGNPILIGTESVEVSEKLSRILRQN  591 (969)
T ss_pred             -HHHHHHHHHHHCCCEEEECCCCCCEEECCCCEEECCHHHHHHHHHHHH-HHHHHCCCCEEEEECCHHHHHHHHHHHHHC
T ss_conf             -768999999868835996799982123288838528999999999999-999957998899838579999999999986


Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCEEEEECHHHCCCCHHH--------------H
Q ss_conf             65464888613467478999999996388757976102003633223326676250235886045--------------5
Q gi|254780947|r  858 VPELKIAMAHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMFGLAQLY--------------Q  923 (1187)
Q Consensus       858 ~p~~~i~vaHGqm~~~~le~~m~~F~~~~~dvLv~TtIiEsGlDip~aNTiii~~ad~~GLaqly--------------Q  923 (1187)
T Consensus       592 --gI~H~VLNAK--~h~~EAeIIA~AG~~GaVTIATNMAGRGTDIkL~-------~~V~~lGGLhVIGTERHESRRIDnQ  660 (969)
T PRK12899        592 --RIEHTVLNAK--NHAQEAEIIAGAGKLGAVTVATNMAGRGTDIKLD-------EEAVAVGGLHVIGTSRHQSRRIDRQ  660 (969)
T ss_pred             --CCCHHHCCCH--HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC-------CCHHHCCCEEEEECCCCHHHHHHHH
T ss_conf             --9964541511--1789999999559999779713267898583138-------1334338727852143401457767


Q ss_pred             HHHHCCCCCCCCEEEEEEC
Q ss_conf             3221035676736999966
Q gi|254780947|r  924 LRGRVGRSKIASFALFLLP  942 (1187)
Q Consensus       924 lrGRVGRs~~~ayayl~~~  942 (1187)
T Consensus       661 LRGRaGRQGDPGsS~F~lS  679 (969)
T PRK12899        661 LRGRCARLGDPGAAKFFLS  679 (969)
T ss_pred             HHCCCCCCCCCCCCEEEEE
T ss_conf             6033134789985326765