HHsearch alignment for GI: 254780947 and conserved domain: PRK12900

>PRK12900 secA preprotein translocase subunit SecA; Reviewed.
Probab=95.23  E-value=0.16  Score=30.57  Aligned_cols=227  Identities=12%  Similarity=0.191  Sum_probs=116.7

Q ss_pred             HHHHHHCCCEEEECCCCCCCCCCC-CCEEEEEECCCCCCCCCHHHCCCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             999751146089626753222246-7337764146656682001001122220001858999999999986798299995
Q gi|254780947|r  337 FDALIQTTHKLVQMTAFNQQETAH-NRVVHLNAFPGKSWVPSAVQKIESQDNWESGGRFDKFLSHVAQQAQKGIKTIISA  415 (1187)
Q Consensus       337 l~~ll~~~~~ii~l~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~g~l~~L~~~I~~~~k~g~rViI~a  415 (1187)
T Consensus       482 ~Qn~Fr~Y~kLsGMTGTA~te~~Ef~~iY~l~Vv~IPTn~P~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~gqPVLVGT  561 (983)
T PRK12900        482 IQNFFRLYKKLAGMTGTAETEASEFFEIYKLDVVVIPTNRPIVRKDMDDLVYKTRREKYNAIVLKVEELQKKGQPVLVGT  561 (983)
T ss_pred             HHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             88998537462047567488999999986886698489998400126550418999999999999999974799889983


Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCC----CCHHH--HHCCCCCCEEEEECCCCCC--------CC-CCCEEEE-ECCCCCC
Q ss_conf             894589999986776488733234----52245--5204668479998104468--------74-6656887-1200137
Q gi|254780947|r  416 SSQGALQHLIHLIESHGFKKIKKI----NTLTE--INSLLKEEIAAVILPINQG--------FE-TKHMILV-TETDLLG  479 (1187)
Q Consensus       416 ~s~~~~eRL~elL~e~gI~~~~~~----~~~~~--~~~~~~~~i~i~~~~L~~G--------F~-~~kl~vI-TE~EIFG  479 (1187)
T Consensus       562 ~SVe~SE~lS~~L~~~gI~h~VLNAk~h~~EA~IIa~AG~~GaVTIATNMAGRGTDIkLg~~V~elGGL~VIgTErh-eS  640 (983)
T PRK12900        562 ASVEVSETLSRMLRAKRIEHNVLNAKQNEREAEIVAEAGQKGAVTIATNMAGRGTDIKLGEGVRELGGLFILGSERH-ES  640 (983)
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCC-HH
T ss_conf             87899999999999859955651678478899999936999977982436789858254834465388077511423-02


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEE------ECCCCEEEEEHHHHH
Q ss_conf             31112212222222110122444032351120355423311231014566666359999------869987996667521
Q gi|254780947|r  480 KKIARRVVRKKNVHAQSFFDSSNIEEGAIIVHAEHGIGRFVRLYSIEVSGTFHDCLELH------YADNAKLFVPVENID  553 (1187)
Q Consensus       480 ~k~~~r~~rkk~~~~~~i~dl~eL~~GDyVVH~dHGIGrY~GLe~l~v~G~~~DyL~Ie------Ya~~DkLYVPv~~l~  553 (1187)
T Consensus       641 rRIDnQLrGRa---G---------RQGDP--------------------G~S~F~lSLeDdLmr~F-g~dri------~~  681 (983)
T PRK12900        641 RRIDRQLRGRA---G---------RQGDP--------------------GESVFYVSLEDELMRLF-GSDRV------IS  681 (983)
T ss_pred             HHHHHHHHCCC---C---------CCCCC--------------------CCEEEEEECCHHHHHHH-CCHHH------HH
T ss_conf             56787860432---4---------57999--------------------85399996417999975-42789------99


Q ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHH
Q ss_conf             111003678885323434034899999999999999999999-----------99988740
Q gi|254780947|r  554 LISRYSTEITTVTLDKLGGSAWKTRKANLKKRLEDLAQKLVD-----------IAAKRAIH  603 (1187)
Q Consensus       554 lIskYg~~~~~p~L~kLGg~~W~k~K~Kakk~v~diA~eLl~-----------lyA~R~~~  603 (1187)
T Consensus       682 ~~~~lg~~e~~~i~~~~i~~~ie~AQkkvE~~nfdiRK~ll~yDdVmN~QRkVIY~qR~~I  742 (983)
T PRK12900        682 VMDKLGHEEGDVIEHSMITKSIERAQKKVEEQNFAIRKRLLEYDDVLNQQREVIYTRRRNG  742 (983)
T ss_pred             HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9984279999816766699999999999986357999888788677999989999999999