HHsearch alignment for GI: 254780947 and conserved domain: PRK12900
>PRK12900 secA preprotein translocase subunit SecA; Reviewed.
Probab=95.23 E-value=0.16 Score=30.57 Aligned_cols=227 Identities=12% Similarity=0.191 Sum_probs=116.7
Q ss_pred HHHHHHCCCEEEECCCCCCCCCCC-CCEEEEEECCCCCCCCCHHHCCCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 999751146089626753222246-7337764146656682001001122220001858999999999986798299995
Q gi|254780947|r 337 FDALIQTTHKLVQMTAFNQQETAH-NRVVHLNAFPGKSWVPSAVQKIESQDNWESGGRFDKFLSHVAQQAQKGIKTIISA 415 (1187)
Q Consensus 337 l~~ll~~~~~ii~l~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~g~l~~L~~~I~~~~k~g~rViI~a 415 (1187)
T Consensus 482 ~Qn~Fr~Y~kLsGMTGTA~te~~Ef~~iY~l~Vv~IPTn~P~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~gqPVLVGT 561 (983)
T PRK12900 482 IQNFFRLYKKLAGMTGTAETEASEFFEIYKLDVVVIPTNRPIVRKDMDDLVYKTRREKYNAIVLKVEELQKKGQPVLVGT 561 (983)
T ss_pred HHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 88998537462047567488999999986886698489998400126550418999999999999999974799889983
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCC----CCHHH--HHCCCCCCEEEEECCCCCC--------CC-CCCEEEE-ECCCCCC
Q ss_conf 894589999986776488733234----52245--5204668479998104468--------74-6656887-1200137
Q gi|254780947|r 416 SSQGALQHLIHLIESHGFKKIKKI----NTLTE--INSLLKEEIAAVILPINQG--------FE-TKHMILV-TETDLLG 479 (1187)
Q Consensus 416 ~s~~~~eRL~elL~e~gI~~~~~~----~~~~~--~~~~~~~~i~i~~~~L~~G--------F~-~~kl~vI-TE~EIFG 479 (1187)
T Consensus 562 ~SVe~SE~lS~~L~~~gI~h~VLNAk~h~~EA~IIa~AG~~GaVTIATNMAGRGTDIkLg~~V~elGGL~VIgTErh-eS 640 (983)
T PRK12900 562 ASVEVSETLSRMLRAKRIEHNVLNAKQNEREAEIVAEAGQKGAVTIATNMAGRGTDIKLGEGVRELGGLFILGSERH-ES 640 (983)
T ss_pred CCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCC-HH
T ss_conf 87899999999999859955651678478899999936999977982436789858254834465388077511423-02
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEE------ECCCCEEEEEHHHHH
Q ss_conf 31112212222222110122444032351120355423311231014566666359999------869987996667521
Q gi|254780947|r 480 KKIARRVVRKKNVHAQSFFDSSNIEEGAIIVHAEHGIGRFVRLYSIEVSGTFHDCLELH------YADNAKLFVPVENID 553 (1187)
Q Consensus 480 ~k~~~r~~rkk~~~~~~i~dl~eL~~GDyVVH~dHGIGrY~GLe~l~v~G~~~DyL~Ie------Ya~~DkLYVPv~~l~ 553 (1187)
T Consensus 641 rRIDnQLrGRa---G---------RQGDP--------------------G~S~F~lSLeDdLmr~F-g~dri------~~ 681 (983)
T PRK12900 641 RRIDRQLRGRA---G---------RQGDP--------------------GESVFYVSLEDELMRLF-GSDRV------IS 681 (983)
T ss_pred HHHHHHHHCCC---C---------CCCCC--------------------CCEEEEEECCHHHHHHH-CCHHH------HH
T ss_conf 56787860432---4---------57999--------------------85399996417999975-42789------99
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHH
Q ss_conf 111003678885323434034899999999999999999999-----------99988740
Q gi|254780947|r 554 LISRYSTEITTVTLDKLGGSAWKTRKANLKKRLEDLAQKLVD-----------IAAKRAIH 603 (1187)
Q Consensus 554 lIskYg~~~~~p~L~kLGg~~W~k~K~Kakk~v~diA~eLl~-----------lyA~R~~~ 603 (1187)
T Consensus 682 ~~~~lg~~e~~~i~~~~i~~~ie~AQkkvE~~nfdiRK~ll~yDdVmN~QRkVIY~qR~~I 742 (983)
T PRK12900 682 VMDKLGHEEGDVIEHSMITKSIERAQKKVEEQNFAIRKRLLEYDDVLNQQREVIYTRRRNG 742 (983)
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9984279999816766699999999999986357999888788677999989999999999