HHsearch alignment for GI: 254780947 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=95.42 E-value=0.12 Score=31.54 Aligned_cols=45 Identities=31% Similarity=0.206 Sum_probs=35.2
Q ss_pred EEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH
Q ss_conf 431665432489999999875112754999824366555899999
Q gi|254780947|r 650 LICGDVGFGKTEIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLF 694 (1187)
Q Consensus 650 LiCGDVGfGKTEVA~RAafkav~~gkQvavlvPTTiLa~QH~~tf 694 (1187)
T Consensus 6 ll~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~~~~~~~~~~ 50 (148)
T smart00382 6 LIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLL 50 (148)
T ss_pred EEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH
T ss_conf 999999702999999999872668996899875998988898765