HHsearch alignment for GI: 254780947 and conserved domain: smart00487

>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=99.72  E-value=3.3e-16  Score=143.60  Aligned_cols=165  Identities=27%  Similarity=0.303  Sum_probs=132.0

Q ss_pred             HHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC--CEEEEEECHHHHHHHHHHHHHHH
Q ss_conf             8488888744899999998760598854144316654324899999998751127--54999824366555899999986
Q gi|254780947|r  620 KRFPHVETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIAVMNG--LQVAVIAPTTLLVRQHFRLFSER  697 (1187)
Q Consensus       620 ~~FpyeET~DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAafkav~~g--kQvavlvPTTiLa~QH~~tf~~R  697 (1187)
T Consensus         3 ~~~~~~~~~~Q~~~~~~~~~~~-----~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~q~~~~~~~~   77 (201)
T smart00487        3 KFGFEPLRPYQKEAIEALLSGL-----RDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAEQWAEELKKL   77 (201)
T ss_pred             CCCCCCCCHHHHHHHHHHHCCC-----CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             1379999988999999998389-----98899899996099999999999863389975999908599999999886010


Q ss_pred             HCCCC-CCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEC-----HHHHCCCCCCCCCCEEEEECHHHHHH-HHHHHH---
Q ss_conf             06789-833541066630256777753122576089852-----06542785202365699722233008-889988---
Q gi|254780947|r  698 FQGFS-VRIASISRFVQTKEAALHKKSITEGQVDIVIGT-----HALLNPKITFANLGLIIIDEEQHFGV-KHKEAL---  767 (1187)
Q Consensus       698 f~~~p-v~i~~lsRf~~~~e~~~i~~~l~~G~idiviGT-----H~ll~~~v~f~~LgLliiDEEqrFGV-~~Ke~l---  767 (1187)
T Consensus        78 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~i~t~~~l~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~  153 (201)
T smart00487       78 GPSLGLKVVGLYGG----DSKREQLRKLESGKTDILVTTPGRLLDLLENDLLELSNVDLVILDEAHRLLDGGFGDQLEKL  153 (201)
T ss_pred             CCCCEEEEEEEECC----CCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEEECHHHHHCCCCHHHHHHH
T ss_conf             21020445565247----73799999997599989995589999999727545254319999896775125709999999


Q ss_pred             -HHCCCCCCEEEEECCCC---CHHHHHHHH
Q ss_conf             -63167884899953534---088999971
Q gi|254780947|r  768 -KETHTGVHVLTLSATPI---PRTLQLAIT  793 (1187)
Q Consensus       768 -k~~~~~vdvLtlsATPI---PRTL~msl~  793 (1187)
T Consensus       154 ~~~~~~~~~~i~lSAT~~~~~~~~~~~~~~  183 (201)
T smart00487      154 LKLLPKNVQLLLLSATPPEEIENLLELFLN  183 (201)
T ss_pred             HHHCCCCCCEEEECCCCCHHHHHHHHHHCC
T ss_conf             996799997899924898689999999789