BLAST/PSIBLAST alignment of GI: 254780947 and GI: 315122360 at iteration 1
>gi|315122360|ref|YP_004062849.1| transcription-repair coupling factor [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1185
>gi|313495762|gb|ADR52361.1| transcription-repair coupling factor [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1185
 Score = 1974 bits (5115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 957/1186 (80%), Positives = 1068/1186 (90%), Gaps = 2/1186 (0%)

Query: 1    MIFGSDIERISEKYCKKITLSPVIDGTEGFILAEIARLGLSLVYICSDERILINLKKILT 60
            MIFG  I +I+EK CKKITLS V  GTE F+LAEIAR GLSLVYI SDER L+N+KK L 
Sbjct: 1    MIFGDYINKINEKPCKKITLSQVFPGTEPFVLAEIARSGLSLVYIGSDERALVNIKKTLA 60

Query: 61   LVVPDIRVIIFPAWDCLPYDRVSPSPYVVTRRLSCISNLVSFNSSKETIIVLTTVSAVMC 120
             +VPDI VIIFPAWDCLPYDR+S SP VVT RL+C S+L+S N SK+T I+LTTVSAVMC
Sbjct: 61   FIVPDIDVIIFPAWDCLPYDRISASPRVVTDRLACFSHLISCNPSKKTSIILTTVSAVMC 120

Query: 121  RSVNIMSIKDYKLSIQSKDQIDMAKVIEKLETNGFQRVNAVYKVGEYAVRGGILDVYEPT 180
            RSVN MSIKD K SIQSKDQI MAKVIEKLE NGFQRVN VYKVGEYAVRGGILDVY P+
Sbjct: 121  RSVNFMSIKDCKFSIQSKDQISMAKVIEKLEKNGFQRVNTVYKVGEYAVRGGILDVYGPS 180

Query: 181  KKYPVRLDFFGNTIDSLRLFDSSTQRTIREISIFEINTLSEVMLTSQNISRFRENYLANF 240
            +KYPVRLDFFG+TI+SLRLFD ++QRTIREIS F INTLSEV+LTS+NIS FR+NYL NF
Sbjct: 181  EKYPVRLDFFGDTIESLRLFDYASQRTIREISTFTINTLSEVVLTSENISLFRKNYLLNF 240

Query: 241  GTTTQEDPLYVAISQGRRYPGMEHWLPFFYQSMETIFPYLSEFCIITDPLVKETARKRSQ 300
            G  TQ+D LYV +SQG RYPGMEHWLPFFYQ METIF YL++FCI+TD  VK+TA KRSQ
Sbjct: 241  GAATQKDLLYVTVSQGNRYPGMEHWLPFFYQKMETIFSYLADFCIVTDSAVKDTAHKRSQ 300

Query: 301  LIQDYYEARLQYSSDKKQYSVYKPIAPEKLYLNYQQFDALIQTTHKLVQMTAFNQQETAH 360
            LIQDYYEAR Q+SSDKK YS+YKPI PEKLYL YQQF+A++++++KL+QMT F+QQET+H
Sbjct: 301  LIQDYYEARCQHSSDKKNYSIYKPILPEKLYLTYQQFEAMLESSNKLIQMTPFSQQETSH 360

Query: 361  NRVVHLNAFPGKSWVPSAVQKIESQDNWESGGRFDKFLSHVAQQAQKGIKTIISASSQGA 420
            + VV LN  PGKSWVPSAVQKIESQ+NWES  RFD+FLS+VAQQ QKG K  I+ASS+GA
Sbjct: 361  SCVVCLNVRPGKSWVPSAVQKIESQENWESMNRFDRFLSYVAQQFQKGKKAFIAASSKGA 420

Query: 421  LQHLIHLIESHGFKKIKKINTLTEINSLLKEEIAAVILPINQGFETKHMILVTETDLLGK 480
            LQHLIHL+ES G  KIKKI+   EI+SL KEEIAA +LPI+QGFET +MILVTE DLLGK
Sbjct: 421  LQHLIHLMESDGLNKIKKIDCFNEIHSLAKEEIAAAVLPIDQGFETGNMILVTEKDLLGK 480

Query: 481  KIARRVVRKKNVHAQSFFDSSNIEEGAIIVHAEHGIGRFVRLYSIEVSGTFHDCLELHYA 540
            +I RR VRK ++ A SFF+SSNIEEG+IIVHAEHGIGRF+RL SIEVSGT HDCLELHYA
Sbjct: 481  RIIRRTVRKSSL-ANSFFESSNIEEGSIIVHAEHGIGRFIRLSSIEVSGTSHDCLELHYA 539

Query: 541  DNAKLFVPVENIDLISRYSTEITTVTLDKLGGSAWKTRKANLKKRLEDLAQKLVDIAAKR 600
            DNAKLFVPVENIDLIS+YSTE  T+ LDKLGGS+W++RK+NLKKRLEDLAQKLVDIAAKR
Sbjct: 540  DNAKLFVPVENIDLISQYSTENETIMLDKLGGSSWQSRKSNLKKRLEDLAQKLVDIAAKR 599

Query: 601  AIHSVPPLMVSQDLYSQFIKRFPHVETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKT 660
             IH+VP L VSQDLYSQF+K+FPHVETEDQEKA+DAVIQD +SG LMDRLICGDVGFGKT
Sbjct: 600  LIHNVPALTVSQDLYSQFVKKFPHVETEDQEKAVDAVIQDFTSGHLMDRLICGDVGFGKT 659

Query: 661  EIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFSERFQGFSVRIASISRFVQTKEAALH 720
            EIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFSERFQ F VRI S+SRFV+ KE ALH
Sbjct: 660  EIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFSERFQDFPVRIVSVSRFVKPKEVALH 719

Query: 721  KKSITEGQVDIVIGTHALLNPKITFANLGLIIIDEEQHFGVKHKEALKETHTGVHVLTLS 780
            KK+I EGQVDIVIGTHALL+PKITF+NLGLII+DEEQHFGVKHKEALKETHTGVHVLTLS
Sbjct: 720  KKAIAEGQVDIVIGTHALLDPKITFSNLGLIIVDEEQHFGVKHKEALKETHTGVHVLTLS 779

Query: 781  ATPIPRTLQLAITGVRELSLISMPPINRIACRTSISIFDPLVVRETLMREYYRGGQSFYV 840
            ATPIPRTLQLAITGVRELSLISMPPINRIACRTSISIFDPL++RETLMREYYRGGQSFYV
Sbjct: 780  ATPIPRTLQLAITGVRELSLISMPPINRIACRTSISIFDPLLIRETLMREYYRGGQSFYV 839

Query: 841  CPRLSDLEKCYTFLQSEVPELKIAMAHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGL 900
            CPRL DL+KCY FLQSEVPELK+AMAHGQMSPKNLE+ MN FYE +YD+LLSTSIVESGL
Sbjct: 840  CPRLLDLDKCYDFLQSEVPELKVAMAHGQMSPKNLEETMNGFYERKYDILLSTSIVESGL 899

Query: 901  DLPKANTMIVQRADMFGLAQLYQLRGRVGRSKIASFALFLLPENRPLTAAAQKRLRILQS 960
            DLP ANT+I+QRADMFGLAQLYQLRGRVGRSKI+SFALFLLPEN+PLT++AQKRLRILQS
Sbjct: 900  DLPNANTIIIQRADMFGLAQLYQLRGRVGRSKISSFALFLLPENKPLTSSAQKRLRILQS 959

Query: 961  LNTLGAGFQLASYDLDIRGTGNLLGEEQSGHIREIGFELYQKMLEETVASIKGQKDLVES 1020
            LNTLGAGFQLAS+DLDIRGTGNLLGEEQSGHI+E+GFELYQKML ETVASIKG+++LV+S
Sbjct: 960  LNTLGAGFQLASHDLDIRGTGNLLGEEQSGHIKEVGFELYQKMLGETVASIKGKRELVDS 1019

Query: 1021 DWSPQVLIEASVMIPESYVSDINLRLSLYRRLGNITDHADISHFKEEMVDRFGPLPIEVI 1080
            DWSPQ++IEASVMIP+SYVSD+NLRLSLYRRLGNITDH DI+ FKEEMVDRFG LPIEV+
Sbjct: 1020 DWSPQIMIEASVMIPDSYVSDVNLRLSLYRRLGNITDHTDINRFKEEMVDRFGSLPIEVV 1079

Query: 1081 HLLKVVFLKLLCRIANIDKMDIGLKGIIIQFRHKTFSNPEALLQYIAQQKGKIIIRPDQN 1140
            HLLKV+FLKLLCRIANI+KMDIG KGII+QFR+K F NPE LLQYI QQKGKIIIRPDQ+
Sbjct: 1080 HLLKVLFLKLLCRIANIEKMDIGPKGIIVQFRNKKFHNPEKLLQYIMQQKGKIIIRPDQS 1139

Query: 1141 LVFDCLLPTINQRFFEAKRIITHLINMTNPEIQTPDSGD-LSLKVK 1185
            L FDCLLPTIN+RF EAK I++ LI + + +IQ  D  D  SLKVK
Sbjct: 1140 LFFDCLLPTINKRFIEAKHILSQLIKLIDVDIQKCDKNDSASLKVK 1185