RPSBLAST alignment for GI: 254780947 and conserved domain: cd00268

>gnl|CDD|28928 cd00268, DEADc, DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (motif II). This domain contains the ATP- binding region.. Length = 203

 Score = 40.5 bits (95), Expect = 0.003
 Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 35/191 (18%)

Query: 627 TEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIAVM----------NGLQ 676
           T  Q +AI  ++     GR  D +     G GKT     AAF+  +          +G Q
Sbjct: 23  TPIQARAIPPLLS----GR--DVIGQAQTGSGKT-----AAFLIPILEKLDPSPKKDGPQ 71

Query: 677 VAVIAPTTLLVRQHFRLFSERFQGFSVRIASISRFVQTKEAALHKKSITEGQVDIVIGT- 735
             ++APT  L  Q   +  +  +  ++++  I             + +  G   IV+ T 
Sbjct: 72  ALILAPTRELALQIAEVARKLGKHTNLKVVVI---YGGTSIDKQIRKLKRG-PHIVVATP 127

Query: 736 ----HALLNPKITFANLGLIIIDE-----EQHFGVKHKEALKETHTGVHVLTLSATPIPR 786
                 L   K+  + +  +++DE     +  F  + +E LK        L  SAT    
Sbjct: 128 GRLLDLLERGKLDLSKVKYLVLDEADRMLDMGFEDQIREILKLLPKDRQTLLFSATMPKE 187

Query: 787 TLQLAITGVRE 797
              LA   +R 
Sbjct: 188 VRDLARKFLRN 198