RPSBLAST alignment for GI: 254780947 and conserved domain: cd00079

>gnl|CDD|28960 cd00079, HELICc, Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may not be an autonomously folding unit, but an integral part of the helicase; 4 helicase superfamilies at present according to the organization of their signature motifs; all helicases share the ability to unwind nucleic acid duplexes with a distinct directional polarity; they utilize the free energy from nucleoside triphosphate hydrolysis to fuel their translocation along DNA, unwinding the duplex in the process. Length = 131
 Score = 77.7 bits (191), Expect = 2e-14
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 822 VVRETLMREYYRGGQSFYVCPRLSDLEKCYTFLQSEVPELKIAMAHGQMSPKNLEDKMNA 881
            + E L     +GG+    CP    L++    L+   P +K+A  HG  S +  E+ +  
Sbjct: 16  ALLELLKEHLKKGGKVLIFCPSKKMLDELAELLRK--PGIKVAALHGDGSQEEREEVLKD 73

Query: 882 FYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMFGLAQLYQLRGRVGRSKIASFALFL 940
           F EG+  VL++T ++  G+DLP  + +I      +  +   Q  GR GR+     A+ L
Sbjct: 74  FREGEIVVLVATDVIARGIDLPNVSVVINYDLP-WSPSSYLQRIGRAGRAGQKGTAILL 131