RPSBLAST alignment for GI: 254780947 and conserved domain: COG1198

>gnl|CDD|31391 COG1198, PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]. Length = 730
 Score = 76.1 bits (187), Expect = 5e-14
 Identities = 96/440 (21%), Positives = 149/440 (33%), Gaps = 107/440 (24%)

Query: 591 QKLVDIAAKRAIHSVPPLMVSQDLYSQFIKRFPHVETEDQEKAIDAVIQDLSSGRLMDRL 650
           + L        I   PPL+V+    S           ++Q+ A++A++  L        L
Sbjct: 167 KGLEKKGLIEIIELEPPLVVAPPDPS---LSEWLALNQEQQAAVEAILSSLGGFAPF--L 221

Query: 651 ICGDVGFGKTEIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFSERFQG-FSVRIASIS 709
           + G  G GKTE+ L A    +  G QV V+ P   L  Q       RF+  F  ++A + 
Sbjct: 222 LDGVTGSGKTEVYLEAIAKVLAQGKQVLVLVPEIALTPQ----LLARFKARFGAKVAVLH 277

Query: 710 RFVQTKEAALHKKSITEGQVDIVIGTH-ALLNPKITFANLGLIIIDEEQHFGVKHKEA-- 766
             +   E     +    G+  +VIGT  AL  P   F NLGLII+DEE     K ++   
Sbjct: 278 SGLSPGERYRVWRRARRGEARVVIGTRSALFLP---FKNLGLIIVDEEHDSSYKQEDGPR 334

Query: 767 --------LKETHTGVHVLTLSATPIPRTLQLAITGVRELSLIS-------MPPINRIAC 811
                   L+       V+  SATP   +   A +G  +L  ++       +P +  I  
Sbjct: 335 YHARDVAVLRAKKENAPVVLGSATPSLESYANAESGKYKLLRLTNRAGRARLPRVEIIDM 394

Query: 812 RTSISIFDPLV-------VRETLMREY-------YRGGQSFYVCPRLSDLEKC------Y 851
           R         +       +R+TL R          RG     +C     + +C       
Sbjct: 395 RKEPLETGRSLSPALLEAIRKTLERGEQVLLFLNRRGYAPLLLCRDCGYIAECPNCDSPL 454

Query: 852 TF-------------------------------------------LQSEVPELKIA-MAH 867
           T                                            L+   P  +I  +  
Sbjct: 455 TLHKATGQLRCHYCGYQEPIPQSCPECGSEHLRAVGPGTERIEEELKRLFPGARIIRIDS 514

Query: 868 GQMSPKN-LEDKMNAFYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMF---------- 916
                K  LED ++ F  G+ D+L+ T ++  G D P    + V  AD            
Sbjct: 515 DTTRRKGALEDLLDQFANGEADILIGTQMIAKGHDFPNVTLVGVLDADTGLGSPDFRASE 574

Query: 917 -GLAQLYQLRGRVGRSKIAS 935
                L Q+ GR GR+    
Sbjct: 575 RTFQLLMQVAGRAGRAGKPG 594