RPSBLAST alignment for GI: 254780947 and conserved domain: KOG0343

>gnl|CDD|35564 KOG0343, KOG0343, KOG0343, RNA Helicase [RNA processing and modification]. Length = 758

 Score = 40.4 bits (94), Expect = 0.003
 Identities = 51/275 (18%), Positives = 97/275 (35%), Gaps = 64/275 (23%)

Query: 673 NGLQVAVIAPTTLLVRQHFRLFSE--RFQGFSVRIASISRFVQTKEAALHKKSITEGQVD 730
           +GL   +I+PT  L  Q F + ++  +   FS  +      +  K+     + I+  Q++
Sbjct: 140 DGLGALIISPTRELALQTFEVLNKVGKHHDFSAGL-----IIGGKDVKFELERIS--QMN 192

Query: 731 IVIGT------HALLNPKITFANLGLIIIDE-----EQHFGVKHKEALKETHTGVHVLTL 779
           I++ T      H   NP  + +NL ++++DE     +  F       ++        L  
Sbjct: 193 ILVCTPGRLLQHMDENPNFSTSNLQMLVLDEADRMLDMGFKKTLNAIIENLPKKRQTLLF 252

Query: 780 SATPIPRTLQLAITGVRELSLISMPPINRIACRTSISIFDPLVVRETLMREYYRGGQSFY 839
           SAT       LA   +++   +S            +           L        QS+ 
Sbjct: 253 SATQTKSVKDLARLSLKDPVYVS------------VHENAVAATPSNLQ-------QSYV 293

Query: 840 VCPRLSDLEKCYTFLQSEV-------------------------PELKIAMAHGQMSPKN 874
           + P    ++  ++F++S +                         P + +   HG MS K 
Sbjct: 294 IVPLEDKIDMLWSFIKSHLKKKSIVFLSSCKQVKFLYEAFCRLRPGIPLLALHGTMSQKK 353

Query: 875 LEDKMNAFYEGQYDVLLSTSIVESGLDLPKANTMI 909
             +    F   +  VL  T +   GLD P  + +I
Sbjct: 354 RIEVYKKFVRKRAVVLFCTDVAARGLDFPAVDWVI 388