HHsearch alignment for GI: 254780948 and conserved domain: COG5347
>COG5347 GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion].
Probab=93.18 E-value=0.22 Score=27.94 Aligned_cols=85 Identities=15% Similarity=0.151 Sum_probs=56.9
Q ss_pred HHHHHHHCCCCCHHHHCCCCCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHH-HHHCCC-CCCCHHHHHHHHHHHHHHH
Q ss_conf 99999837676612210235556622443012100111024753200001234-552256-7899899999998999999
Q gi|254780948|r 136 LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS-FLWKEE-QTIDADSLKSAFQLTDYFL 213 (240)
Q Consensus 136 l~LL~~lGf~p~L~~C~~cg~~~~l~~~s~~~g~av~~~~~~~~~~kll~lp~-fL~~~~-~~~~~~~i~~~l~lt~~fL 213 (240)
T Consensus 8 ~~~l~~l~~~~~Nk~CaDCga~~-P~W~S~nlGvfiCi~CagvHRs--LGvhiS~VKSitLD~wt~~~l~~-m~~gGN~~ 83 (319)
T COG5347 8 RKLLKLLKSDSSNKKCADCGAPN-PTWASVNLGVFLCIDCAGVHRS--LGVHISKVKSLTLDNWTEEELRR-MEVGGNSN 83 (319)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCC-CCEEECCCCEEEEEECCHHHHC--CCCCEEEEEEEECCCCCHHHHHH-HHHHCCHH
T ss_conf 99999986040568150379999-8448635586987412054423--55540466542014689999999-98704531
Q ss_pred HHHHHHHCCCC
Q ss_conf 85656628999
Q gi|254780948|r 214 NKYALQHNIIH 224 (240)
Q Consensus 214 ~k~~l~~~~~~ 224 (240)
T Consensus 84 a~~~~e~~~~~ 94 (319)
T COG5347 84 ANRFYEKNLLD 94 (319)
T ss_pred HHHHHCCCCCC
T ss_conf 56675148875