HHsearch alignment for GI: 254780948 and conserved domain: PRK00085

Probab=100.00  E-value=5.6e-45  Score=294.24  Aligned_cols=222  Identities=35%  Similarity=0.547  Sum_probs=184.4

Q ss_pred             CCEEEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCCC--CCCCCCCCEEEEEEECCCCCCCCCC-HHHHHCCC
Q ss_conf             95000169983035880244754227212869999966767553--2000344314799821577765431-01221014
Q gi|254780948|r    1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEF-RFEVLESH   77 (240)
Q Consensus         1 M~~~d~giVL~~~~~~E~~~Iv~~~T~~~G~~~~i~rG~~~~k~--~~~lq~~~~~~~~~~~k~~~~l~~~-~~e~~~~~   77 (240)
T Consensus         2 m~~~~~aiVL~~~~y~E~d~iv~~~T~~~Gki~~iakG~rk~ks~~~~~lqpf~~~~~~~~~~~~--l~~l~~~e~~~~~   79 (235)
T PRK00085          2 MEWRDEGIVLHTRPYGETSLIVTVFTREHGRVRAVAKGARKPKSKLRAVLQPFTPLDLLWSAGRE--LDTLTQAETIGSY   79 (235)
T ss_pred             CCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECC--CCCEEEEEECCHH
T ss_conf             86420499997210478055677897788709999833767777655434676289999997468--6738998871125


Q ss_pred             CHHHCCCCHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
Q ss_conf             22210440589999999999-99621356676789999999996122343013799999999998376766122102355
Q gi|254780948|r   78 CAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV  156 (240)
Q Consensus        78 ~~~~~~~~~~l~~~~~~~~l-~~~l~e~e~~~~lf~~l~~~L~~l~~~~~~~~~~~~fEl~LL~~lGf~p~L~~C~~cg~  156 (240)
T Consensus        80 ~~l-~~d~~~l~~a~yi~El~~~~~~e~~~~~~lf~ll~~~L~~L~~~~~~~~~~~~fel~LL~~lG~~p~l~~C~~cg~  158 (235)
T PRK00085         80 AAI-LLDGFALAYASYLNELLDRLLPEREPHPELFELLLQTLDALAEGEDPEPLLRRFELRLLAELGYGLDLDHCAVCGA  158 (235)
T ss_pred             HHH-HHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCC
T ss_conf             566-4059999999999999999756778729999999999999857897189999999999998598871323416899


Q ss_pred             CCCCEE-EEECCCCHHHHCCCCCCCCHHHHHHHHHHCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             566224-4301210011102475320000123455225-----6789989999999899999985656628999998799
Q gi|254780948|r  157 TQDLLW-VSPKSGGAVCRSVGLPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE  230 (240)
Q Consensus       157 ~~~l~~-~s~~~g~av~~~~~~~~~~kll~lp~fL~~~-----~~~~~~~~i~~~l~lt~~fL~k~~l~~~~~~~P~sR~  230 (240)
T Consensus       159 ~~~~~y~fs~~~Gg~~c~~~~---~~~~~~l~~l~~~~~~~l~~~~~~~~~~~~~~~ll~~~l~~~L-----g~~lkS~~  230 (235)
T PRK00085        159 DPDLTYRFSPKSGGAVCRECR---ADVLLLLPLFLGGDLLALEAISSDAETKRAAKRLTRYFLQRYL-----GRPLKSRE  230 (235)
T ss_pred             CCCCCEEEEECCCCEECCCCC---HHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHC-----CCCCCHHH
T ss_conf             888648998167978876546---7688899998144599886078999999999999999999984-----99950899


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780948|r  231 NFL  233 (240)
Q Consensus       231 ~f~  233 (240)
T Consensus       231 ~l~  233 (235)
T PRK00085        231 LLD  233 (235)
T ss_pred             HHH
T ss_conf             997