HHsearch alignment for GI: 254780948 and conserved domain: pfam11967
>pfam11967 RecO_N Recombination protein O N terminal. Recombination protein O (RecO) is involved in DNA repair and pfam00470 pathway recombination. This domain forms a beta barrel structure.
Probab=99.67 E-value=4.8e-17 Score=123.59 Aligned_cols=75 Identities=27% Similarity=0.518 Sum_probs=62.9
Q ss_pred CCEEEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCC--CCCCCCCCCEEEEEEECCCCCCCCCC-HHHHHCC
Q ss_conf 9500016998303588024475422721286999996676755--32000344314799821577765431-0122101
Q gi|254780948|r 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEF-RFEVLES 76 (240)
Q Consensus 1 M~~~d~giVL~~~~~~E~~~Iv~~~T~~~G~~~~i~rG~~~~k--~~~~lq~~~~~~~~~~~k~~~~l~~~-~~e~~~~ 76 (240)
T Consensus 2 ~~~~~~aiVL~~~~y~E~d~iv~~~T~~~G~~~~~akG~rk~ks~~~~~l~pf~~~~~~~~~~~~-~L~~l~~ae~~~~ 79 (80)
T pfam11967 2 RLWKTEGIVLHTRDYGESDKIVTLFTREHGKISGVARGARKPKSRLRAALQPFTLLELVLYAGGR-GLGTLTQAELIDS 79 (80)
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCEEEEEEEECCC-CCCEEEEEEEEEC
T ss_conf 83598899997556387247776871589699999984657889874391799789999994998-9887978999515