HHsearch results for GI: 254780948 and protein with PDBid: 1u5k_A

>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans R1} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=100.00  E-value=3.9e-37  Score=245.02  Aligned_cols=213  Identities=15%  Similarity=0.150  Sum_probs=170.6

Q ss_pred             CEEEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCHHH
Q ss_conf             50001699830358802447542272128699999667675532000344314799821577765431012210142221
Q gi|254780948|r    2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKL   81 (240)
Q Consensus         2 ~~~d~giVL~~~~~~E~~~Iv~~~T~~~G~~~~i~rG~~~~k~~~~lq~~~~~~~~~~~k~~~~l~~~~~e~~~~~~~~~   81 (240)
                      .|+++||||++++|||+|+||++||++ |+++++|||+||+|.++.+||++.+++.|..+....+...+...+.++.+..
T Consensus         5 ~~~~egiVL~~~~~~E~d~iv~l~T~~-G~i~~~akG~rksk~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   83 (244)
T 1u5k_A            5 TANRSGIVIRRRVTPAGDIIVTLLTPQ-GKLKAIARGGVKGPLSSSLNLFHHVGVQVYQGPHNDLASVKQAVLEGALPTL   83 (244)
T ss_dssp             EEEEEEEEEEEEECTTSCEEEEEEETT-EEEEEEETTCTTSTTTTTSCTTCEEEEEEECCCC-CCEEEEEEEEEECCGGG
T ss_pred             CCCCCEEEEECEECCCCCEEEEEECCC-CCEEEEECCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEEECCCCHHHHH
T ss_conf             457727999642438746899999788-8189998067678876643776310022122278872788740224444554


Q ss_pred             CCCCHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
Q ss_conf             0440589999999999-996213566767899999999961223430137999999999983767661221023555662
Q gi|254780948|r   82 LSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL  160 (240)
Q Consensus        82 ~~~~~~l~~~~~~~~l-~~~l~e~e~~~~lf~~l~~~L~~l~~~~~~~~~~~~fEl~LL~~lGf~p~L~~C~~cg~~~~l  160 (240)
                       .|..++.++.+++++ .+++++++|++.+|+++..+|+.++....+...++.||+++|+.+||+|++++|++||..+ .
T Consensus        84 -~d~~~~~~a~~i~El~~~~~~~~~~~~~lf~ll~~~L~~l~~~~~~~~~~~~F~lklL~~~G~~p~l~~C~~cg~~~-~  161 (244)
T 1u5k_A           84 -AEPERYAFAHLMAEFADALFQEGEFSEQAFDLFAASLRGVAHQPDPEWVALVMSYKLLGLAGVIPQTARCARCGAPD-P  161 (244)
T ss_dssp             -GSHHHHHHHHHHHHHHHHHSCTTCCCHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHTTSSSCCCCSBCTTTCCBS-C
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCC-C
T ss_conf             -28999999999999999975037973899999999999971689839999999999999706385320030389968-7


Q ss_pred             EEEEECCCCHHHHCCCCCCCC--HHHHHHHHHHCC------CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             244301210011102475320--000123455225------678998999999989999998565
Q gi|254780948|r  161 LWVSPKSGGAVCRSVGLPYAE--KMLVLPSFLWKE------EQTIDADSLKSAFQLTDYFLNKYA  217 (240)
Q Consensus       161 ~~~s~~~g~av~~~~~~~~~~--kll~lp~fL~~~------~~~~~~~~i~~~l~lt~~fL~k~~  217 (240)
                      .++++..||.||..|+....-  ..+.+-..+...      ....+..+..+.+++...|+..|+
T Consensus       162 ~~f~~~~Gg~vC~~c~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~yl~~Hl  226 (244)
T 1u5k_A          162 EHPDPLGGQLLCSKCAALPPYPPAVLDFLRHAVRRTVRASFEQPVPSADRPALWRALEKFVTVQV  226 (244)
T ss_dssp             CEECTTTSSEECTTTCSSCCCCHHHHHHHHHTTTSCHHHHHHSCCCGGGHHHHHHHHHHHHHHHS
T ss_pred             CCEEHHCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             50546209777767767898999999999999806987774155999999999999999999996