HHsearch results for GI: 254780948 and protein with PDBid: 1u5k_A
>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans R1} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=100.00 E-value=3.9e-37 Score=245.02 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=170.6
Q ss_pred CEEEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCHHH
Q ss_conf 50001699830358802447542272128699999667675532000344314799821577765431012210142221
Q gi|254780948|r 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKL 81 (240)
Q Consensus 2 ~~~d~giVL~~~~~~E~~~Iv~~~T~~~G~~~~i~rG~~~~k~~~~lq~~~~~~~~~~~k~~~~l~~~~~e~~~~~~~~~ 81 (240)
.|+++||||++++|||+|+||++||++ |+++++|||+||+|.++.+||++.+++.|..+....+...+...+.++.+..
T Consensus 5 ~~~~egiVL~~~~~~E~d~iv~l~T~~-G~i~~~akG~rksk~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 83 (244)
T 1u5k_A 5 TANRSGIVIRRRVTPAGDIIVTLLTPQ-GKLKAIARGGVKGPLSSSLNLFHHVGVQVYQGPHNDLASVKQAVLEGALPTL 83 (244)
T ss_dssp EEEEEEEEEEEEECTTSCEEEEEEETT-EEEEEEETTCTTSTTTTTSCTTCEEEEEEECCCC-CCEEEEEEEEEECCGGG
T ss_pred CCCCCEEEEECEECCCCCEEEEEECCC-CCEEEEECCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEEECCCCHHHHH
T ss_conf 457727999642438746899999788-8189998067678876643776310022122278872788740224444554
Q ss_pred CCCCHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
Q ss_conf 0440589999999999-996213566767899999999961223430137999999999983767661221023555662
Q gi|254780948|r 82 LSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL 160 (240)
Q Consensus 82 ~~~~~~l~~~~~~~~l-~~~l~e~e~~~~lf~~l~~~L~~l~~~~~~~~~~~~fEl~LL~~lGf~p~L~~C~~cg~~~~l 160 (240)
.|..++.++.+++++ .+++++++|++.+|+++..+|+.++....+...++.||+++|+.+||+|++++|++||..+ .
T Consensus 84 -~d~~~~~~a~~i~El~~~~~~~~~~~~~lf~ll~~~L~~l~~~~~~~~~~~~F~lklL~~~G~~p~l~~C~~cg~~~-~ 161 (244)
T 1u5k_A 84 -AEPERYAFAHLMAEFADALFQEGEFSEQAFDLFAASLRGVAHQPDPEWVALVMSYKLLGLAGVIPQTARCARCGAPD-P 161 (244)
T ss_dssp -GSHHHHHHHHHHHHHHHHHSCTTCCCHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHTTSSSCCCCSBCTTTCCBS-C
T ss_pred -CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCC-C
T ss_conf -28999999999999999975037973899999999999971689839999999999999706385320030389968-7
Q ss_pred EEEEECCCCHHHHCCCCCCCC--HHHHHHHHHHCC------CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 244301210011102475320--000123455225------678998999999989999998565
Q gi|254780948|r 161 LWVSPKSGGAVCRSVGLPYAE--KMLVLPSFLWKE------EQTIDADSLKSAFQLTDYFLNKYA 217 (240)
Q Consensus 161 ~~~s~~~g~av~~~~~~~~~~--kll~lp~fL~~~------~~~~~~~~i~~~l~lt~~fL~k~~ 217 (240)
.++++..||.||..|+....- ..+.+-..+... ....+..+..+.+++...|+..|+
T Consensus 162 ~~f~~~~Gg~vC~~c~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~yl~~Hl 226 (244)
T 1u5k_A 162 EHPDPLGGQLLCSKCAALPPYPPAVLDFLRHAVRRTVRASFEQPVPSADRPALWRALEKFVTVQV 226 (244)
T ss_dssp CEECTTTSSEECTTTCSSCCCCHHHHHHHHHTTTSCHHHHHHSCCCGGGHHHHHHHHHHHHHHHS
T ss_pred CCEEHHCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 50546209777767767898999999999999806987774155999999999999999999996