BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780948|ref|YP_003065361.1| DNA repair protein RecO [Candidatus Liberibacter asiaticus str. psy62] (240 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780948|ref|YP_003065361.1| DNA repair protein RecO [Candidatus Liberibacter asiaticus str. psy62] gi|254040625|gb|ACT57421.1| DNA repair protein RecO [Candidatus Liberibacter asiaticus str. psy62] Length = 240 Score = 493 bits (1270), Expect = e-138, Method: Compositional matrix adjust. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS Sbjct: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC Sbjct: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA Sbjct: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI Sbjct: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 >gi|315122361|ref|YP_004062850.1| DNA repair protein RecO [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495763|gb|ADR52362.1| DNA repair protein RecO [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 240 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 182/240 (75%), Positives = 217/240 (90%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+WQDDAI+LGVRSYGEKNIILEVMTR YGRHLGFVR GQS R+QP+LQ GNLVRVNWRS Sbjct: 1 MHWQDDAIVLGVRSYGEKNIILEVMTRHYGRHLGFVRYGQSRRIQPVLQVGNLVRVNWRS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL Q+LGEFR E++E C+KLLSS++ LYGLQS++P+FRFLPER+PC +LYD+LN+F+N Sbjct: 61 RLEQDLGEFRLEIIEYRCSKLLSSAISLYGLQSMIPIFRFLPERDPCPDLYDLLNLFINS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 HKI S++GKIF+QIEL+LLKNIGFGL++TKCVVTGV+ DL WVSPKSGGA+C S+GLPYA Sbjct: 121 HKISSILGKIFIQIELILLKNIGFGLEITKCVVTGVSHDLSWVSPKSGGAICHSLGLPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 KMLVLP FLWKE+Q IDADSL++AF+LT YFL+KYA QHNIIHC+ LR NFL KL+EL+ Sbjct: 181 SKMLVLPLFLWKEQQNIDADSLRNAFRLTGYFLDKYAFQHNIIHCNSLRINFLNKLIELL 240 >gi|227821417|ref|YP_002825387.1| DNA repair protein RecO [Sinorhizobium fredii NGR234] gi|227340416|gb|ACP24634.1| DNA repair protein RecO [Sinorhizobium fredii NGR234] Length = 276 Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 112/240 (46%), Positives = 162/240 (67%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 29 MQWSDQAIILGIRRHGESSVIAEVMTSAHGRHLGLVRSGRSRTMQPVLQPGNSVEVTWRA 88 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E LE A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 89 RLDEHLGEFRLEPLELRAARLMEAATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 148 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPK+G AV R+ G PYA Sbjct: 149 LQDPADAGELFVRFELAVLNDLGFGLDLSECAATGHRAELIYVSPKTGRAVSRAAGAPYA 208 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 E+ML LP FL D DSL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 209 ERMLALPDFLSGTRSAADHDSLAAAFRLTAYFLNRHVYEPRGVDVSSARDGFVHATLKAL 268 >gi|307320728|ref|ZP_07600140.1| DNA repair protein RecO [Sinorhizobium meliloti AK83] gi|306893655|gb|EFN24429.1| DNA repair protein RecO [Sinorhizobium meliloti AK83] Length = 259 Score = 244 bits (624), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 165/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 13 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 73 RLDEHLGEFRVEPLQLRAARLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 132 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 133 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 192 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 193 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 252 >gi|20139557|sp|Q92KH5|RECO_RHIME RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 247 Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 1 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 61 RLDEHLGEFRVEPLQLRAASLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 121 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 181 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 240 >gi|150395917|ref|YP_001326384.1| DNA repair protein RecO [Sinorhizobium medicae WSM419] gi|166221910|sp|A6U7B9|RECO_SINMW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150027432|gb|ABR59549.1| DNA repair protein RecO [Sinorhizobium medicae WSM419] Length = 249 Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 111/240 (46%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWSDQAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRAMQPVLQPGNSVEVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 61 RLDEHLGEFRVEPLQLRAARLIETATSVYGIQALGSLLRLLPERDPHPHLYEALAVIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 121 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 E+ML LP FL + + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 181 ERMLALPDFLSGQNRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 240 >gi|195970186|ref|NP_385194.3| DNA repair protein RecO [Sinorhizobium meliloti 1021] gi|307300911|ref|ZP_07580680.1| DNA repair protein RecO [Sinorhizobium meliloti BL225C] gi|15074020|emb|CAC45667.1| Recombinational DNA repair protein (RecF pathway) [Sinorhizobium meliloti 1021] gi|306903866|gb|EFN34452.1| DNA repair protein RecO [Sinorhizobium meliloti BL225C] Length = 259 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 13 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 73 RLDEHLGEFRVEPLQLRAASLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 132 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 133 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 192 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 193 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 252 >gi|325292418|ref|YP_004278282.1| DNA repair protein RecO [Agrobacterium sp. H13-3] gi|325060271|gb|ADY63962.1| DNA repair protein RecO [Agrobacterium sp. H13-3] Length = 254 Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 115/241 (47%), Positives = 167/241 (69%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD+AIILGV+ +GE ++I EVMTR GRHLG VR G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDEAIILGVKRHGETSVIAEVMTRLRGRHLGMVRGGRSRSMQPVLQAGNRVDVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY L++ L+ Sbjct: 61 RLDDHLGEFRIEPLQLRAAQLMETATAVYGVQAMGALLRLLPERDPHPHLYQALDVILDN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++FV+ EL +L ++GFGLDLT+C TG+ DL++VSPK+G AVC + G PYA Sbjct: 121 LHDPVDAGELFVRFELAVLNDLGFGLDLTECAATGLRTDLIYVSPKTGRAVCSTAGAPYA 180 Query: 181 EKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 E+ML LP+FL + + + D DSL +AF+LT +FL+++ ++ + R+ F+ L+ Sbjct: 181 ERMLSLPAFLGEGQSKAADRDSLAAAFRLTGHFLHRHVYDPRGLNENAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|209548606|ref|YP_002280523.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238058646|sp|B5ZW78|RECO_RHILW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209534362|gb|ACI54297.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 256 Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 116/241 (48%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL E D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLGIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|15888381|ref|NP_354062.1| DNA repair protein RecO [Agrobacterium tumefaciens str. C58] gi|42559508|sp|Q8UGJ8|RECO_AGRT5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|15156061|gb|AAK86847.1| DNA repair protein RecO [Agrobacterium tumefaciens str. C58] Length = 254 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 112/241 (46%), Positives = 167/241 (69%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD+AIILGV+ +GE ++I EVMT GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDEAIILGVKRHGETSVIAEVMTPSRGRHLGMVRSGRSRTMQPVLQAGNRVDVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LGEFR E L+ +L+ ++ +YG+Q++ L R LPER+P LY L++ L+ Sbjct: 61 RLHDHLGEFRIEPLQLRAGQLMETATAVYGVQAMGALLRLLPERDPHPHLYQALDVILDN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++FV+ EL +L ++GFGLDL++C TG+ DL++VSPK+G AVCR+ G PYA Sbjct: 121 LHDPVDAGELFVRFELAVLNDLGFGLDLSECAATGLRSDLIYVSPKTGRAVCRTAGAPYA 180 Query: 181 EKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +ML LP+FL + + + D +SL +AF+LTD+FL+++ ++ + R+ F+ L+ Sbjct: 181 ARMLALPAFLGEGQSKAADPESLAAAFRLTDHFLHRHVYDPRGLNENAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|116251281|ref|YP_767119.1| DNA repair protein RecO [Rhizobium leguminosarum bv. viciae 3841] gi|119361476|sp|Q1MJ50|RECO_RHIL3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115255929|emb|CAK07010.1| putative DNA repair protein (recombination protein O) [Rhizobium leguminosarum bv. viciae 3841] Length = 256 Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 115/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL++VSPKSG AV R+ G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLVYVSPKSGRAVSRAAGAPWA 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL E D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLSIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|222085393|ref|YP_002543923.1| DNA repair protein RecO [Agrobacterium radiobacter K84] gi|254790503|sp|B9JC76|RECO_AGRRK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|221722841|gb|ACM25997.1| DNA repair protein RecO [Agrobacterium radiobacter K84] Length = 259 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ GE ++I EVMTR GRH+G VR+G+S MQP+LQ GNLV V WR+ Sbjct: 1 MQWQDHAIILGVKRLGETSVIAEVMTRDRGRHMGLVRSGRSRSMQPVLQPGNLVEVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P LYD L++ L Sbjct: 61 RLHEHLGEFRMEPVRLRAARLMETATAVYGVQAMGALLRLLPERDPHPYLYDALDVILEN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P G++FV+ EL +L +G+GLDL +C TGV DL +VSPK+G AVCR+ G P+A Sbjct: 121 MQNPMDAGELFVRFELAVLNELGYGLDLGECAATGVRDDLAFVSPKTGRAVCRTAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML LP FL + + +SL +AF+LT +FL+++ + I RE F+ L+ Sbjct: 181 DKMLALPPFLAAGTVEAANGESLAAAFRLTGFFLHRHVYEPRGIEIAAAREGFIQAALKA 240 Query: 240 I 240 + Sbjct: 241 V 241 >gi|241203893|ref|YP_002974989.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857783|gb|ACS55450.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 256 Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 114/241 (47%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL++VSPKSG AV R+ G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLVYVSPKSGRAVSRAAGAPWA 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL E D +SL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLRIEGNHAADFESLSAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|86357032|ref|YP_468924.1| DNA repair protein RecO [Rhizobium etli CFN 42] gi|119361475|sp|Q2KAD9|RECO_RHIEC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86281134|gb|ABC90197.1| DNA repair protein [Rhizobium etli CFN 42] Length = 256 Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 114/241 (47%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S M+P+LQ GN V V WR+ Sbjct: 1 MQWQDQAIILGVKRHGETSVIAEVMTRGRGRHLGLVRSGRSRAMRPVLQPGNAVEVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMDTATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL E D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADVDSLAAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|218461899|ref|ZP_03501990.1| DNA repair protein RecO [Rhizobium etli Kim 5] Length = 256 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 113/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVDGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEASAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|190891077|ref|YP_001977619.1| DNA repair protein (recombination protein O) [Rhizobium etli CIAT 652] gi|238692513|sp|B3PUP2|RECO_RHIE6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190696356|gb|ACE90441.1| DNA repair protein (recombination protein O) [Rhizobium etli CIAT 652] Length = 256 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL E D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|218509904|ref|ZP_03507782.1| DNA repair protein RecO [Rhizobium etli Brasil 5] Length = 245 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL E D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|327191326|gb|EGE58359.1| DNA repair protein (recombination protein O) [Rhizobium etli CNPAF512] Length = 281 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 26 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 85 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 86 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 145 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 146 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 205 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL E D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 206 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 265 Query: 240 I 240 + Sbjct: 266 L 266 >gi|163760593|ref|ZP_02167674.1| DNA repair protein [Hoeflea phototrophica DFL-43] gi|162282208|gb|EDQ32498.1| DNA repair protein [Hoeflea phototrophica DFL-43] Length = 256 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG+R +GE ++I EVMT +GRH+G VR G+S R+QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGLRKHGETSVIAEVMTHAHGRHMGIVRGGRSKRLQPVLQPGNSVDLVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+++ E++ + +L+ S++ ++G+Q++ L R LPER+ L+D + L+ Sbjct: 61 RLDEHLGQYQVELINARAGRLMQSAIGVHGVQAMAALLRLLPERDSHPRLHDAFAVILDS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G ++V+ EL +L+++GFGLDLT C TG ++DL++VSPKSG AV + G P+A Sbjct: 121 FDAPEEAGALYVRFELAVLEDLGFGLDLTACAATGASEDLVYVSPKSGRAVSAAAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTI-DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 E+ML LP+FL Q DA L F+L+ YFL+++ + I + RE+F L+ Sbjct: 181 ERMLALPAFLADRSQACGDAQMLAHGFKLSGYFLDRHVFEPRGIEAPISRESFCTAALKA 240 Query: 240 I 240 + Sbjct: 241 M 241 >gi|222148084|ref|YP_002549041.1| DNA repair protein RecO [Agrobacterium vitis S4] gi|221735072|gb|ACM36035.1| DNA repair protein RecO [Agrobacterium vitis S4] Length = 264 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 110/237 (46%), Positives = 157/237 (66%), Gaps = 5/237 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AI+LG R +GE ++I E+MT GRHLG VR G+S MQP+LQ GN+V V WR+ Sbjct: 1 MEWTDQAIVLGARRHGETSVIAEMMTLARGRHLGLVRGGRSRTMQPVLQPGNVVEVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+FR E L+ L+SS+ +YG+Q++ L R LPEREP LY+ +NI L+ Sbjct: 61 RLEEHLGDFRVEPLQLRAGHLMSSATAVYGVQALASLLRLLPEREPHGHLYEAMNIILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++F++ EL +L ++GFGLDLT C TG QDL++VSPK+G AV + GLPYA Sbjct: 121 LHEPASAGELFIRFELAILNDLGFGLDLTACAATGGRQDLVFVSPKTGRAVSHAAGLPYA 180 Query: 181 EKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 +++L LP FL E ++ DA +L+ AF+LT YFL ++ + + R+ F Sbjct: 181 DRLLTLPVFLQPEPLVGKDKQADAQALQQAFRLTGYFLQRHVYEPRGLTAGAARDGF 237 >gi|239831498|ref|ZP_04679827.1| DNA repair protein RecO [Ochrobactrum intermedium LMG 3301] gi|239823765|gb|EEQ95333.1| DNA repair protein RecO [Ochrobactrum intermedium LMG 3301] Length = 245 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + I+EVMTR++GRH+G VR G+S RMQP+LQ GN V V W + Sbjct: 3 MEWRDEGIILGTRRHGETSAIVEVMTREHGRHMGMVRGGRSRRMQPLLQPGNHVDVTWWA 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 63 RLDEHMGSFTIEPLEFAAARLIETPVALYGIQLAASHLRLLPERDPHRGLYETLRLIIEH 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TGV +DL++VSPKSG AVCR VG P+A Sbjct: 123 FDDPLASGELVLRFEVMMLEELGFGLDLKECAATGVKEDLIYVSPKSGRAVCREVGAPWA 182 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+L+LP F+ + D + AF +T YFL ++ + I R FL L Sbjct: 183 DKLLLLPGFVNNTAVRAASYDDIDHAFTMTGYFLMRHVWEPRAITPPDARGGFLNAL 239 >gi|153009952|ref|YP_001371167.1| DNA repair protein RecO [Ochrobactrum anthropi ATCC 49188] gi|151561840|gb|ABS15338.1| DNA repair protein RecO [Ochrobactrum anthropi ATCC 49188] Length = 243 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 150/237 (63%), Gaps = 1/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + I+EVMTR++GRH+G VR G+S RMQP+LQ GN V V W + Sbjct: 1 MEWRDEGIILGTRRHGETSAIVEVMTREHGRHMGMVRGGRSRRMQPLLQPGNHVDVTWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGSFTIEPLEFAAARLIETPVALYGIQLAASHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL KC TGV +DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLASGELVLRFEVMMLEELGFGLDLKKCAATGVKEDLIYVSPKSGRAVCRDAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+L+LP F+ + D + AF +T YFL ++ + + R FL L Sbjct: 181 DKLLLLPGFVNNTAVRASSYDDIDHAFTMTGYFLMRHVWEPRAVTPPDARGGFLNAL 237 >gi|13476445|ref|NP_108015.1| DNA repair protein RecO [Mesorhizobium loti MAFF303099] gi|20139624|sp|Q985A3|RECO_RHILO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|14027206|dbj|BAB54160.1| DNA repair protein; RecO [Mesorhizobium loti MAFF303099] Length = 253 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 102/237 (43%), Positives = 150/237 (63%), Gaps = 1/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEVMTR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVMTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L++ + Sbjct: 61 RLDEHLGTFQAEAIEMNAARLMDSAVAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R G P+ Sbjct: 121 LDDADAAGELVARFELLILDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGAPWR 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +KML LP+FL + D +++ AF+LT +F ++ + I R FL L Sbjct: 181 DKMLALPAFLQRGSGLRADPAAVEDAFRLTGFFFTRHVYEPRAIEQPDARAGFLAAL 237 >gi|90420864|ref|ZP_01228769.1| DNA repair protein recO [Aurantimonas manganoxydans SI85-9A1] gi|90334839|gb|EAS48611.1| DNA repair protein recO [Aurantimonas manganoxydans SI85-9A1] Length = 243 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 101/236 (42%), Positives = 148/236 (62%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++AI+LGVR GE +++ EVMTR GRHLG VR G+S + QP+LQ GN V V+WR+ Sbjct: 1 MEWREEAIVLGVRRLGETSVVAEVMTRARGRHLGLVRGGRSRKQQPVLQPGNSVAVHWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ S + L G+Q + R L ER+P LYD L I ++ Sbjct: 61 RLDEHMGAFVLEPLELRAARLMESGVGLNGVQLVAAHLRLLAERDPHARLYDGLQIIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P ++ ++ ++ E+ LL+ +GFGLDL +C TG DL +VSP++G AV R G P+ Sbjct: 121 LDRPELVAELMLRFEIALLEELGFGLDLERCAATGQRDDLAYVSPRTGRAVSRDAGAPWH 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+L LP+FL DA+SL + ++LT YFL ++ + I R FL L Sbjct: 181 DKLLTLPAFLADAATASDAESLAAGYRLTGYFLGRHVYEPRGIDVPDARAGFLSAL 236 >gi|260462318|ref|ZP_05810526.1| DNA repair protein RecO [Mesorhizobium opportunistum WSM2075] gi|259031812|gb|EEW33080.1| DNA repair protein RecO [Mesorhizobium opportunistum WSM2075] Length = 258 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 103/237 (43%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEVMTR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVMTRTHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L++ + Sbjct: 61 RLDEHLGTFQAEPIEMNAARLMDSAIAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R GLP+ Sbjct: 121 LDDADAAGELVARFELLILDELGFGLDLSRCAATGTQQDLAYVSPKSGRAVSREAGLPWR 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +KML LP+FL + D +++ AF+LT +F ++ + I R FL L Sbjct: 181 DKMLALPAFLQRGSGLRADPGAVEDAFRLTGFFFTRHVYEPRAIEQPDARLGFLAAL 237 >gi|170748446|ref|YP_001754706.1| DNA repair protein RecO [Methylobacterium radiotolerans JCM 2831] gi|170654968|gb|ACB24023.1| DNA repair protein RecO [Methylobacterium radiotolerans JCM 2831] Length = 239 Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 101/216 (46%), Positives = 137/216 (63%), Gaps = 1/216 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DDA++LG+R +GE +ILE MT +GRHLG V G+S RMQP+LQAGN VR+ WR+ Sbjct: 1 MQWTDDALVLGLRRHGETGVILEAMTEAHGRHLGLVHGGRSRRMQPVLQAGNRVRLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E L+S ++L+ SSL LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDEGLGSYAVEPLDSQVSRLIGSSLALYGMNHMAALLRLLPERDPHPALYEAAGILVEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+V + V+ EL +L +GFGLDLT C TG L +VSPKSG AV S G PY Sbjct: 121 LDDPAVAPPLMVRFELAILSELGFGLDLTACAATGGNDALAYVSPKSGRAVSASAGEPYR 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +++L LP+FL + D + F LT YFL+++ Sbjct: 181 DRLLALPTFL-HAGGSPGPDGVAQGFTLTGYFLDRH 215 >gi|328543511|ref|YP_004303620.1| DNA repair protein recO [polymorphum gilvum SL003B-26A1] gi|326413255|gb|ADZ70318.1| DNA repair protein recO [Polymorphum gilvum SL003B-26A1] Length = 253 Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 145/240 (60%), Gaps = 4/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W +D IILG RS+GE ++LE+MTR+ GRHLG VR G+S R QP+LQ GNLVR WR+ Sbjct: 1 MEWSEDGIILGTRSHGESGVVLELMTRRRGRHLGLVRGGRSRRQQPVLQPGNLVRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R+A LG F E L+ L+ S+L L+ LQ + L R LPER+ LYD L I L+ Sbjct: 61 RIADQLGAFTVEPLQLRAGALMDSALALHALQHLAGLLRLLPERDAHERLYDALTIVLDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + G + V+ EL LL +GFGLDLT+C TG DL +VSPKSG AV R G PY Sbjct: 121 LGEAMIAGPLIVRFELELLNELGFGLDLTRCAATGQLWDLAYVSPKSGRAVSRDAGAPYR 180 Query: 181 EKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LPSFL + E+ ++ + +LT +FL ++ L+ L RE + L Sbjct: 181 DQLLPLPSFLVEGERQPGSEITFADISQGLRLTAFFLARHVLEPQGHAPSLSREELVKAL 240 >gi|319784500|ref|YP_004143976.1| DNA repair protein RecO [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170388|gb|ADV13926.1| DNA repair protein RecO [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 258 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEV+TR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVLTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L + + Sbjct: 61 RLDEHLGTFQAEAIEMNAARLMDSAVAVYGLQTMAAHLRLLPERDAHEGLYETLAVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R GLP+ Sbjct: 121 LDDADVAGELVARFELLVLDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGLPWR 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 ++ML LP+FL + DA + AF+LT +F N++ + I R FL L Sbjct: 181 DRMLALPAFLQRGSGLRADAADVDDAFRLTGFFFNRHVYEPRGIEPPDARTGFLAAL 237 >gi|110633306|ref|YP_673514.1| DNA repair protein RecO [Mesorhizobium sp. BNC1] gi|119361464|sp|Q11JS6|RECO_MESSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110284290|gb|ABG62349.1| DNA replication and repair protein RecO [Chelativorans sp. BNC1] Length = 248 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 100/238 (42%), Positives = 147/238 (61%), Gaps = 1/238 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LG R +GE ++ILE +T +GRHLG VR G+S RMQP+LQ GN V + WR+ Sbjct: 1 MEWHDEGIVLGTRRHGESSVILEAITAAHGRHLGLVRGGRSKRMQPVLQPGNRVDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E LE + A+LL+S++ +YG+Q + R LPER+P L++ L + Sbjct: 61 RLDEHLGLFQVEPLELNAARLLNSAVAIYGIQLLAAHLRLLPERDPHPGLFEALGVIAAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G + + EL +L +GFGLDL +C VTG +DL +VSPK+G AV R G P+A Sbjct: 121 LDEPETAGVLVARFELAVLDALGFGLDLARCAVTGSREDLAYVSPKTGRAVTREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTI-DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L LP+FL + + D L AF LT +F ++ + + R FL ++ Sbjct: 181 DKLLPLPTFLTAGNEALYDRAILSQAFALTGFFFARHVYEPRGLTEPEARAGFLAAVM 238 >gi|114705890|ref|ZP_01438793.1| DNA repair protein RecO [Fulvimarina pelagi HTCC2506] gi|114538736|gb|EAU41857.1| DNA repair protein RecO [Fulvimarina pelagi HTCC2506] Length = 241 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 144/219 (65%), Gaps = 5/219 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ ++LGVR +GE ++I E+MTR GRHLG VR G+S M+P+LQ GN V +WR+ Sbjct: 1 MEWREEGVVLGVRRHGETSVIAELMTRSRGRHLGLVRGGRSKAMRPVLQPGNSVMAHWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF--- 117 RL +++G F E + S L+ S++ L+G+Q R L ER+P LYD L + Sbjct: 61 RLDEHMGAFALEPVASRAGGLMESTVGLHGVQLAASHLRLLAERDPHPRLYDGLIVLIEN 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 LN ++ G++ ++ EL +L+ +GFGLDL +C +G +DL++VSPKSG AV R G Sbjct: 121 LNADRL--TAGELMLRFELAVLEELGFGLDLARCAASGTKEDLVYVSPKSGRAVSREPGE 178 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 PY +K+L LP+FL ++ D ++L++ F LT YFL+++ Sbjct: 179 PYHDKLLALPAFLTDTDRAADGETLRTGFTLTRYFLSRH 217 >gi|163842935|ref|YP_001627339.1| DNA repair protein RecO [Brucella suis ATCC 23445] gi|163673658|gb|ABY37769.1| DNA repair protein RecO [Brucella suis ATCC 23445] Length = 247 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 102/236 (43%), Positives = 146/236 (61%), Gaps = 5/236 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 EK+L LPSF+ + + A D L AF +T YFL ++ + R FL Sbjct: 181 EKLLSLPSFV--NDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFL 234 >gi|121601946|ref|YP_988791.1| DNA repair protein RecO [Bartonella bacilliformis KC583] gi|166221884|sp|A1US38|RECO_BARBK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120614123|gb|ABM44724.1| DNA repair protein RecO [Bartonella bacilliformis KC583] Length = 245 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 100/217 (46%), Positives = 146/217 (67%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R YGE ++ILEV+TRQ+GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGARQYGETSVILEVVTRQHGRYMGVVKGGRSRRMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E L+ ++L+ LYGLQ + FR LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFKLEALDLCASRLMFLPEALYGLQLMASHFRLLPERDPHPILYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ V+ E+ LL+ +GFGLDL+ C VTG + L +VSPKSG AVC VGLP+ Sbjct: 121 FDEQFVNAELLVRFEMRLLEELGFGLDLSHCAVTGRQEKLYYVSPKSGRAVCEEVGLPWK 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKY 216 K+L+LP FL + + +D D +++ F LTD+FL ++ Sbjct: 181 NKLLLLPKFLIERTNRPVDFDDIRNGFTLTDFFLTRH 217 >gi|23501551|ref|NP_697678.1| DNA repair protein RecO [Brucella suis 1330] gi|62289624|ref|YP_221417.1| DNA repair protein RecO [Brucella abortus bv. 1 str. 9-941] gi|82699552|ref|YP_414126.1| DNA repair protein RecO [Brucella melitensis biovar Abortus 2308] gi|148559418|ref|YP_001258648.1| DNA repair protein RecO [Brucella ovis ATCC 25840] gi|161618634|ref|YP_001592521.1| DNA repair protein RecO [Brucella canis ATCC 23365] gi|189023877|ref|YP_001934645.1| DNA repair protein RecO [Brucella abortus S19] gi|225852185|ref|YP_002732418.1| DNA repair protein RecO [Brucella melitensis ATCC 23457] gi|237815119|ref|ZP_04594117.1| DNA repair protein RecO [Brucella abortus str. 2308 A] gi|254688939|ref|ZP_05152193.1| DNA repair protein RecO [Brucella abortus bv. 6 str. 870] gi|254693421|ref|ZP_05155249.1| DNA repair protein RecO [Brucella abortus bv. 3 str. Tulya] gi|254697074|ref|ZP_05158902.1| DNA repair protein RecO [Brucella abortus bv. 2 str. 86/8/59] gi|254701451|ref|ZP_05163279.1| DNA repair protein RecO [Brucella suis bv. 5 str. 513] gi|254703997|ref|ZP_05165825.1| DNA repair protein RecO [Brucella suis bv. 3 str. 686] gi|254707629|ref|ZP_05169457.1| DNA repair protein RecO [Brucella pinnipedialis M163/99/10] gi|254709789|ref|ZP_05171600.1| DNA repair protein RecO [Brucella pinnipedialis B2/94] gi|254713791|ref|ZP_05175602.1| DNA repair protein RecO [Brucella ceti M644/93/1] gi|254717152|ref|ZP_05178963.1| DNA repair protein RecO [Brucella ceti M13/05/1] gi|254729970|ref|ZP_05188548.1| DNA repair protein RecO [Brucella abortus bv. 4 str. 292] gi|256031279|ref|ZP_05444893.1| DNA repair protein RecO [Brucella pinnipedialis M292/94/1] gi|256060791|ref|ZP_05450953.1| DNA repair protein RecO [Brucella neotomae 5K33] gi|256113203|ref|ZP_05454071.1| DNA repair protein RecO [Brucella melitensis bv. 3 str. Ether] gi|256257187|ref|ZP_05462723.1| DNA repair protein RecO [Brucella abortus bv. 9 str. C68] gi|256264305|ref|ZP_05466837.1| recombination protein O [Brucella melitensis bv. 2 str. 63/9] gi|256369101|ref|YP_003106609.1| DNA repair protein RecO [Brucella microti CCM 4915] gi|260545621|ref|ZP_05821362.1| recombination protein O [Brucella abortus NCTC 8038] gi|260566756|ref|ZP_05837226.1| recombination protein O [Brucella suis bv. 4 str. 40] gi|260754426|ref|ZP_05866774.1| DNA repair protein recO [Brucella abortus bv. 6 str. 870] gi|260757645|ref|ZP_05869993.1| DNA repair protein recO [Brucella abortus bv. 4 str. 292] gi|260761472|ref|ZP_05873815.1| DNA repair protein recO [Brucella abortus bv. 2 str. 86/8/59] gi|260883454|ref|ZP_05895068.1| DNA repair protein recO [Brucella abortus bv. 9 str. C68] gi|261213672|ref|ZP_05927953.1| DNA repair protein recO [Brucella abortus bv. 3 str. Tulya] gi|261218967|ref|ZP_05933248.1| DNA repair protein recO [Brucella ceti M13/05/1] gi|261315121|ref|ZP_05954318.1| DNA repair protein recO [Brucella pinnipedialis M163/99/10] gi|261317324|ref|ZP_05956521.1| DNA repair protein recO [Brucella pinnipedialis B2/94] gi|261321534|ref|ZP_05960731.1| DNA repair protein recO [Brucella ceti M644/93/1] gi|261324782|ref|ZP_05963979.1| DNA repair protein recO [Brucella neotomae 5K33] gi|261751991|ref|ZP_05995700.1| DNA repair protein recO [Brucella suis bv. 5 str. 513] gi|261754650|ref|ZP_05998359.1| DNA repair protein recO [Brucella suis bv. 3 str. 686] gi|265988362|ref|ZP_06100919.1| DNA repair protein recO [Brucella pinnipedialis M292/94/1] gi|265994611|ref|ZP_06107168.1| DNA repair protein recO [Brucella melitensis bv. 3 str. Ether] gi|297248035|ref|ZP_06931753.1| DNA repair protein RecO [Brucella abortus bv. 5 str. B3196] gi|38258601|sp|Q8G1P8|RECO_BRUSU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|75497079|sp|Q57E78|RECO_BRUAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361447|sp|Q2YMZ9|RECO_BRUA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|23347462|gb|AAN29593.1| DNA repair protein RecO, putative [Brucella suis 1330] gi|62195756|gb|AAX74056.1| putatiave DNA repair protein RecO [Brucella abortus bv. 1 str. 9-941] gi|82615653|emb|CAJ10640.1| Cytochrome P450:Recombination protein O, RecO [Brucella melitensis biovar Abortus 2308] gi|148370675|gb|ABQ60654.1| DNA repair protein RecO [Brucella ovis ATCC 25840] gi|161335445|gb|ABX61750.1| DNA repair protein RecO [Brucella canis ATCC 23365] gi|189019449|gb|ACD72171.1| Recombination protein O, RecO [Brucella abortus S19] gi|225640550|gb|ACO00464.1| DNA repair protein RecO [Brucella melitensis ATCC 23457] gi|237789956|gb|EEP64166.1| DNA repair protein RecO [Brucella abortus str. 2308 A] gi|255999261|gb|ACU47660.1| DNA repair protein RecO [Brucella microti CCM 4915] gi|260097028|gb|EEW80903.1| recombination protein O [Brucella abortus NCTC 8038] gi|260156274|gb|EEW91354.1| recombination protein O [Brucella suis bv. 4 str. 40] gi|260667963|gb|EEX54903.1| DNA repair protein recO [Brucella abortus bv. 4 str. 292] gi|260671904|gb|EEX58725.1| DNA repair protein recO [Brucella abortus bv. 2 str. 86/8/59] gi|260674534|gb|EEX61355.1| DNA repair protein recO [Brucella abortus bv. 6 str. 870] gi|260872982|gb|EEX80051.1| DNA repair protein recO [Brucella abortus bv. 9 str. C68] gi|260915279|gb|EEX82140.1| DNA repair protein recO [Brucella abortus bv. 3 str. Tulya] gi|260924056|gb|EEX90624.1| DNA repair protein recO [Brucella ceti M13/05/1] gi|261294224|gb|EEX97720.1| DNA repair protein recO [Brucella ceti M644/93/1] gi|261296547|gb|EEY00044.1| DNA repair protein recO [Brucella pinnipedialis B2/94] gi|261300762|gb|EEY04259.1| DNA repair protein recO [Brucella neotomae 5K33] gi|261304147|gb|EEY07644.1| DNA repair protein recO [Brucella pinnipedialis M163/99/10] gi|261741744|gb|EEY29670.1| DNA repair protein recO [Brucella suis bv. 5 str. 513] gi|261744403|gb|EEY32329.1| DNA repair protein recO [Brucella suis bv. 3 str. 686] gi|262765724|gb|EEZ11513.1| DNA repair protein recO [Brucella melitensis bv. 3 str. Ether] gi|263094578|gb|EEZ18376.1| recombination protein O [Brucella melitensis bv. 2 str. 63/9] gi|264660559|gb|EEZ30820.1| DNA repair protein recO [Brucella pinnipedialis M292/94/1] gi|297175204|gb|EFH34551.1| DNA repair protein RecO [Brucella abortus bv. 5 str. B3196] gi|326408685|gb|ADZ65750.1| Recombination protein O, RecO [Brucella melitensis M28] gi|326538410|gb|ADZ86625.1| DNA repair protein RecO [Brucella melitensis M5-90] Length = 247 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 99/219 (45%), Positives = 142/219 (64%), Gaps = 5/219 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKY 216 EK+L LPSF+ + + A D L AF +T YFL ++ Sbjct: 181 EKLLSLPSFV--NDTALRASCYDDLDRAFTMTGYFLMRH 217 >gi|294852027|ref|ZP_06792700.1| DNA repair protein RecO [Brucella sp. NVSL 07-0026] gi|294820616|gb|EFG37615.1| DNA repair protein RecO [Brucella sp. NVSL 07-0026] Length = 247 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 102/236 (43%), Positives = 146/236 (61%), Gaps = 5/236 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCWHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 EK+L LPSF+ + + A D L AF +T YFL ++ + R FL Sbjct: 181 EKLLSLPSFV--NDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFL 234 >gi|225627162|ref|ZP_03785200.1| DNA repair protein RecO [Brucella ceti str. Cudo] gi|256159389|ref|ZP_05457171.1| DNA repair protein RecO [Brucella ceti M490/95/1] gi|256254687|ref|ZP_05460223.1| DNA repair protein RecO [Brucella ceti B1/94] gi|260168417|ref|ZP_05755228.1| DNA repair protein RecO [Brucella sp. F5/99] gi|261221865|ref|ZP_05936146.1| DNA repair protein recO [Brucella ceti B1/94] gi|261757878|ref|ZP_06001587.1| recombination protein O [Brucella sp. F5/99] gi|265997829|ref|ZP_06110386.1| DNA repair protein recO [Brucella ceti M490/95/1] gi|225617997|gb|EEH15041.1| DNA repair protein RecO [Brucella ceti str. Cudo] gi|260920449|gb|EEX87102.1| DNA repair protein recO [Brucella ceti B1/94] gi|261737862|gb|EEY25858.1| recombination protein O [Brucella sp. F5/99] gi|262552297|gb|EEZ08287.1| DNA repair protein recO [Brucella ceti M490/95/1] Length = 247 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 99/219 (45%), Positives = 142/219 (64%), Gaps = 5/219 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGRRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKY 216 EK+L LPSF+ + + A D L AF +T YFL ++ Sbjct: 181 EKLLSLPSFV--NDTALRASCYDDLDRAFTMTGYFLMRH 217 >gi|254718804|ref|ZP_05180615.1| DNA repair protein RecO [Brucella sp. 83/13] gi|265983786|ref|ZP_06096521.1| DNA repair protein recO [Brucella sp. 83/13] gi|264662378|gb|EEZ32639.1| DNA repair protein recO [Brucella sp. 83/13] Length = 247 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 101/236 (42%), Positives = 146/236 (61%), Gaps = 5/236 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +K+L LPSF+ + + A D L AF +T YFL ++ + R FL Sbjct: 181 DKLLALPSFV--NDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFL 234 >gi|115525024|ref|YP_781935.1| DNA repair protein RecO [Rhodopseudomonas palustris BisA53] gi|122295836|sp|Q07M79|RECO_RHOP5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115518971|gb|ABJ06955.1| DNA repair protein RecO [Rhodopseudomonas palustris BisA53] Length = 258 Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 99/235 (42%), Positives = 141/235 (60%), Gaps = 2/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G +++P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSKLRPVLQPGNSVHAGWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E + A LL+ YG+ + L R LPER+P E+Y+ + L Sbjct: 61 RLDEHLGYYALEGMRLRAATLLAVPHAAYGITHLAALARLLPERDPHPEMYETVERILED 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ G V+ EL +L +GFGLDL+ C TGVT DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDATMAGAHLVRFELAMLGELGFGLDLSACAATGVTSDLIYVSPKSGGAVSRTAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTID--ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +K+L LP FL ++E AD L+ F LT FL + L+ R+ F+ Sbjct: 181 DKLLRLPPFLREDEDAAGCTADDLRDGFALTGRFLLRNVLEPRGQGHSDARDGFI 235 >gi|254469353|ref|ZP_05082758.1| DNA repair protein RecO [Pseudovibrio sp. JE062] gi|211961188|gb|EEA96383.1| DNA repair protein RecO [Pseudovibrio sp. JE062] Length = 253 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 146/242 (60%), Gaps = 6/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQ + I++G R GE NI+LEV+T GR LG VR G+S R QP LQ GN + + WR+ Sbjct: 1 MQWQAEGIVIGTRKQGENNILLEVLTPDRGRCLGLVRGGRSRRQQPALQLGNHLNLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F E L+ A L+ ++ ++GLQS+ R LPER+P L+ L++ L+ Sbjct: 61 RLDEHLGFFTVEPLQLRAAHLMQTARAIHGLQSLCAQIRLLPERDPHPNLFHALDVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + + ++ EL LL +GFGLDLT+C TG T +L+WVSPKSG AVC++ G PYA Sbjct: 121 LEDPQIGAALVLRFELELLNELGFGLDLTECAATGATDELIWVSPKSGRAVCKTAGQPYA 180 Query: 181 EKMLVLPSFLWKEEQ------TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 K+L LP FL + I +++ F LT YFL KY + I R++++ Sbjct: 181 SKLLTLPEFLKAPQARLSQNIQISKGDMEAGFSLTGYFLFKYIYEPRSIPWPPARDSYVT 240 Query: 235 KL 236 L Sbjct: 241 AL 242 >gi|17987568|ref|NP_540202.1| DNA repair protein RecO [Brucella melitensis bv. 1 str. 16M] gi|256044360|ref|ZP_05447264.1| DNA repair protein RecO [Brucella melitensis bv. 1 str. Rev.1] gi|260563712|ref|ZP_05834198.1| DNA repair protein recO [Brucella melitensis bv. 1 str. 16M] gi|265990775|ref|ZP_06103332.1| DNA repair protein recO [Brucella melitensis bv. 1 str. Rev.1] gi|20139477|sp|Q8YG76|RECO_BRUME RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|17983272|gb|AAL52466.1| DNA repair protein reco [Brucella melitensis bv. 1 str. 16M] gi|260153728|gb|EEW88820.1| DNA repair protein recO [Brucella melitensis bv. 1 str. 16M] gi|263001559|gb|EEZ14134.1| DNA repair protein recO [Brucella melitensis bv. 1 str. Rev.1] Length = 247 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 101/236 (42%), Positives = 145/236 (61%), Gaps = 5/236 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSP SG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPTSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 EK+L LPSF+ + + A D L AF +T YFL ++ + R FL Sbjct: 181 EKLLSLPSFV--NDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFL 234 >gi|163867994|ref|YP_001609198.1| DNA repair protein RecO [Bartonella tribocorum CIP 105476] gi|189039650|sp|A9IRN6|RECO_BART1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|161017645|emb|CAK01203.1| DNA repair protein RecO [Bartonella tribocorum CIP 105476] Length = 248 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 101/234 (43%), Positives = 146/234 (62%), Gaps = 1/234 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILGVR YGE ++ILE++TR+ GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGVRQYGETSVILEIITRERGRYMGVVKGGRSRRMAALLQPGNFVEAEWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ I R LPER+P LYD+L++F+ Sbjct: 61 RLEEHLGLFRLEALDFHAARLICLPEALYALQLIAFHLRLLPERDPHPVLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V ++ V+ E+ LL+ +GFGLDL+ C TG Q L +VSPKSG AVC G P+ Sbjct: 121 FDEPFVNAELLVRFEMRLLEELGFGLDLSCCAATGRKQKLYYVSPKSGRAVCEEAGEPWK 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +K+L+LP FL + + D + + F LT +FL +Y + I +R N + Sbjct: 181 KKLLILPQFLVQRATRPADFRDIINGFNLTSFFLMRYVWEPRDIKQPSVRTNLI 234 >gi|304392068|ref|ZP_07374010.1| DNA repair protein RecO [Ahrensia sp. R2A130] gi|303296297|gb|EFL90655.1| DNA repair protein RecO [Ahrensia sp. R2A130] Length = 241 Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 94/219 (42%), Positives = 138/219 (63%), Gaps = 4/219 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AI+LGVR +GE +++ E+MTRQ GRHLG V G+S M+PILQ GN V WR+ Sbjct: 1 MEWTDQAIVLGVRKHGETSVVAELMTRQRGRHLGLVHGGRSRTMRPILQPGNRVTATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+FR E A+L+ + +Y LQ++ R L ER+ +LYD L++ L+ Sbjct: 61 RLDEHLGQFRIEADNLRAARLMETDYAIYALQTLASHLRLLAERDAHPQLYDTLDLVLDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++ ++ EL LL +GFGLDL C TG +L+ VSP++G AV + PY Sbjct: 121 LDNPAAAGELVIRFELALLDELGFGLDLNACAATGARANLVSVSPRTGRAVSGAAAAPYG 180 Query: 181 EKMLVLPSFL--WKEEQTIDAD--SLKSAFQLTDYFLNK 215 +++L LPSFL + ++T AD +L F LT +FL++ Sbjct: 181 DRLLALPSFLTTAQADRTSGADEETLAQGFALTGHFLHR 219 >gi|306842071|ref|ZP_07474743.1| DNA repair protein RecO [Brucella sp. BO2] gi|306287821|gb|EFM59244.1| DNA repair protein RecO [Brucella sp. BO2] Length = 247 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 100/236 (42%), Positives = 145/236 (61%), Gaps = 5/236 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG L++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDGLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +K+L LPSF+ + + A D L AF +T YFL ++ + R FL Sbjct: 181 DKLLALPSFV--NDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFL 234 >gi|218529181|ref|YP_002419997.1| DNA repair protein RecO [Methylobacterium chloromethanicum CM4] gi|254764643|sp|B7KPI6|RECO_METC4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218521484|gb|ACK82069.1| DNA repair protein RecO [Methylobacterium chloromethanicum CM4] Length = 246 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 135/222 (60%), Gaps = 6/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQ------TIDADSLKSAFQLTDYFLNKY 216 +++L LP FL +Q T D ++ F LT YFL+++ Sbjct: 181 DRLLPLPPFLRDRDQPGSGWRTPDTQDVREGFTLTGYFLDQH 222 >gi|163850484|ref|YP_001638527.1| DNA repair protein RecO [Methylobacterium extorquens PA1] gi|240137548|ref|YP_002962019.1| DNA repair protein RecO [Methylobacterium extorquens AM1] gi|238687373|sp|A9W1K0|RECO_METEP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|163662089|gb|ABY29456.1| DNA repair protein RecO [Methylobacterium extorquens PA1] gi|240007516|gb|ACS38742.1| DNA repair protein RecO [Methylobacterium extorquens AM1] Length = 246 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 135/222 (60%), Gaps = 6/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQ------TIDADSLKSAFQLTDYFLNKY 216 +++L LP FL +Q T D ++ F LT YFL+++ Sbjct: 181 DRLLPLPPFLRDRDQPGSGWRTPDTHDVREGFTLTGYFLDQH 222 >gi|254560020|ref|YP_003067115.1| DNA repair protein RecO [Methylobacterium extorquens DM4] gi|254267298|emb|CAX23130.1| DNA repair protein RecO [Methylobacterium extorquens DM4] Length = 246 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 135/222 (60%), Gaps = 6/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQ------TIDADSLKSAFQLTDYFLNKY 216 +++L LP FL +Q T D ++ F LT YFL+++ Sbjct: 181 DRLLPLPPFLRDRDQSGSGWRTPDTHDVREGFTLTGYFLDQH 222 >gi|49475306|ref|YP_033347.1| DNA repair protein RecO [Bartonella henselae str. Houston-1] gi|61215010|sp|Q6G457|RECO_BARHE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49238112|emb|CAF27319.1| DNA repair protein reco [Bartonella henselae str. Houston-1] Length = 256 Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R YGE ++ILEVMTRQ+GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQYGETSVILEVMTRQHGRYMGVVKGGRSRRMAVLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ IV LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFRLEALDLHAARLILFPEALYALQLIVFHLHLLPERDPHPILYDILHLFMQS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ E+ L+ +GFGLDL++C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDEPFINAELLVRFEMRFLEELGFGLDLSRCAATGRLEKLCYVSPKSGRAVCEEAGHPWR 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKY 216 EK+L LP FL + + +D +K+ F LT +FL ++ Sbjct: 181 EKLLNLPQFLVQRTVRPVDFSDIKNGFILTGFFLMRH 217 >gi|188580258|ref|YP_001923703.1| DNA repair protein RecO [Methylobacterium populi BJ001] gi|238692877|sp|B1ZA19|RECO_METPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|179343756|gb|ACB79168.1| DNA repair protein RecO [Methylobacterium populi BJ001] Length = 246 Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 136/222 (61%), Gaps = 6/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDEGLVIGLRKHGETGVVLELMTLEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ + + Sbjct: 61 RLDGALGSYAVEPLTLNASRLMDSGLALYGIGHLSTLLRLLPERDPHPALYEAAQVLIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDEPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQ------TIDADSLKSAFQLTDYFLNKY 216 +++L LP FL +Q T DA ++ F LT YFL+++ Sbjct: 181 DRLLALPPFLRDRDQPGSGWRTPDAHDVREGFTLTGYFLDQH 222 >gi|240850199|ref|YP_002971592.1| DNA repair protein RecO [Bartonella grahamii as4aup] gi|240267322|gb|ACS50910.1| DNA repair protein RecO [Bartonella grahamii as4aup] Length = 248 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 100/234 (42%), Positives = 147/234 (62%), Gaps = 1/234 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILG R YGE ++ILEVMTR++GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGTRQYGETSVILEVMTREHGRYMGVVKGGRSRRMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ I R LPER+P LYD+L++F+ Sbjct: 61 RLEEHLGLFRLEALDLHAARLICLPEALYALQLIAFHLRLLPERDPHPVLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V ++ V+ E+ LL+ +GFGLDL+ C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDEPFVNAELLVRFEMRLLEELGFGLDLSCCAATGRQERLHYVSPKSGRAVCEEAGEPWK 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +K+L+LP FL + + D+ + + F LT +FL ++ + I +R N + Sbjct: 181 KKLLILPQFLVQRTTRPTDSSDIINGFILTGFFLMRHVWEPRDIKQPSVRMNLI 234 >gi|49474068|ref|YP_032110.1| DNA repair protein RecO [Bartonella quintana str. Toulouse] gi|61215004|sp|Q6G080|RECO_BARQU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49239572|emb|CAF25929.1| DNA repair protein recO [Bartonella quintana str. Toulouse] Length = 243 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 101/234 (43%), Positives = 146/234 (62%), Gaps = 1/234 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILG R YGE +IILEVMTRQ+GR++G V+ G S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGTRQYGETSIILEVMTRQHGRYMGIVKGGHSRRMAGLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ + A+L+ LY LQ IV R LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFRLEALDLYAARLILLPEALYALQLIVFHLRLLPERDPYPSLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ V+ E+ LL+ +GFGLDL++C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDESFVNAELLVRFEMRLLEELGFGLDLSRCAATGRQERLFYVSPKSGRAVCEEAGRPWK 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 EK+L LP FL + + ++ + + F LT +FL ++ + I +R N + Sbjct: 181 EKLLTLPQFLVRRAIRPVNFSDIINGFILTGFFLMRHVWEPRGIKQPSVRVNLI 234 >gi|86749733|ref|YP_486229.1| DNA repair protein RecO [Rhodopseudomonas palustris HaA2] gi|119361478|sp|Q2IWU2|RECO_RHOP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86572761|gb|ABD07318.1| DNA replication and repair protein RecO [Rhodopseudomonas palustris HaA2] Length = 249 Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 136/222 (61%), Gaps = 3/222 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S R++P+LQ GN V WR+ Sbjct: 1 MEWSDEGIILGVRRHGEAGAIVELLTRGHGRHLGLVRGGASSRLRPLLQPGNSVLAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E A +L+SS +YG+ + L R LPER+P ++Y+ML L+ Sbjct: 61 RLDEHLGYYQLEGTRMRAATMLASSHAVYGITHLASLARLLPERDPHEDIYEMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATTDLIYVSPKSGGAVSRTAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQ 219 EK+L LP FL ++ + L+ F LT FL + L+ Sbjct: 181 EKLLRLPDFLREDNDGRNGWSDQDLRDGFDLTGRFLLRNVLE 222 >gi|319408285|emb|CBI81938.1| DNA repair protein RecO [Bartonella schoenbuchensis R1] Length = 248 Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 99/235 (42%), Positives = 149/235 (63%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S M +LQ GN V W + Sbjct: 1 MRWKEQAIILGTRQHGETSVILEIMTRQHGRYMGMVKGGRSRSMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E L+ H ++L+ LY LQ + R LPER+P LYDML+IF+ Sbjct: 61 RLDEHLGLFKLEALDLHASRLMLIPEALYTLQLMASHLRLLPERDPHPILYDMLHIFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 VI ++ ++ E+ LLK +GFGLDL+ CVVTG ++L +VSPKSG AV G + Sbjct: 121 FDEWFVIAELLIRFEMRLLKELGFGLDLSCCVVTGCRENLHYVSPKSGRAVSEEAGYLWR 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L LP FL + + ID + +++ F LT++FL ++ + I +R N + Sbjct: 181 DKLLPLPQFLIQRASRPIDFNDMRNGFALTNFFLTRHVWEPRRIQQPSVRVNLIN 235 >gi|148256029|ref|YP_001240614.1| DNA repair protein RecO [Bradyrhizobium sp. BTAi1] gi|166221886|sp|A5EKL4|RECO_BRASB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146408202|gb|ABQ36708.1| DNA replication and repair protein RecO [Bradyrhizobium sp. BTAi1] Length = 248 Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 101/236 (42%), Positives = 140/236 (59%), Gaps = 4/236 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG+R +GE + +LE++TR++GRHLG VR RM+P+LQ GN VR WR+ Sbjct: 1 MEWTDDGIVLGLRRHGESSAVLELLTREHGRHLGLVRGASGARMRPMLQPGNTVRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + + L A+L+S + YG+ + L R LPER+P E+Y L L+ Sbjct: 61 RLDEHLGMYAIDGLTLRAAELMSVAHGAYGVTHLAALARLLPERDPHQEMYLRLEHALDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ EL +L +GFGLDL C TG T DL++VSPKSGGAV RS G P+A Sbjct: 121 FAEAGGAAVHIVRFELAILAELGFGLDLESCAATGETTDLVYVSPKSGGAVSRSAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQT---IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL + E D D L F+LT FL ++ L+ RE F+ Sbjct: 181 DRLLPLPPFLRESEDDHGFSDQD-LLDGFRLTGLFLLRHVLEPRGQGHSDAREGFI 235 >gi|39935766|ref|NP_948042.1| DNA repair protein RecO [Rhodopseudomonas palustris CGA009] gi|61215044|sp|Q6N6B8|RECO_RHOPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|39649619|emb|CAE28141.1| putative DNA repair protein RecO [Rhodopseudomonas palustris CGA009] Length = 250 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 97/223 (43%), Positives = 136/223 (60%), Gaps = 4/223 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V +WR+ Sbjct: 1 MEWSDEGIILGVRRHGESAAIVELLTRGHGRHLGMVRGGASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLGSSHAVYGVTHLASLARLLPERDPHEEIYQRLVLTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV RS G P+ Sbjct: 121 FDDFGVAAAHLIRFELAILAELGFGLDLSACAATGSTTELIYVSPKSGSAVSRSAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTI----DADSLKSAFQLTDYFLNKYALQ 219 +++L LP+FL +E L F+LT FL + L+ Sbjct: 181 DRLLRLPAFLRDDEAESGHGWSGQDLFDGFELTGRFLLRNVLE 223 >gi|192291353|ref|YP_001991958.1| DNA repair protein RecO [Rhodopseudomonas palustris TIE-1] gi|238692599|sp|B3QJH7|RECO_RHOPT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|192285102|gb|ACF01483.1| DNA repair protein RecO [Rhodopseudomonas palustris TIE-1] Length = 250 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 97/223 (43%), Positives = 136/223 (60%), Gaps = 4/223 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V +WR+ Sbjct: 1 MEWSDEGIILGVRRHGESAAIVELLTRGHGRHLGMVRGGASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLGSSHAVYGVTHLASLARLLPERDPHEEIYQRLVLTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV RS G P+ Sbjct: 121 FDDFGVAAAHLIRFELAILAELGFGLDLSACAATGSTTELIYVSPKSGSAVSRSAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTI----DADSLKSAFQLTDYFLNKYALQ 219 +++L LP+FL +E L F+LT FL + L+ Sbjct: 181 DRLLRLPAFLRDDEAESGNGWSGQDLFDGFELTGRFLLRNVLE 223 >gi|85716281|ref|ZP_01047255.1| DNA repair protein RecO [Nitrobacter sp. Nb-311A] gi|85696953|gb|EAQ34837.1| DNA repair protein RecO [Nitrobacter sp. Nb-311A] Length = 260 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 132/222 (59%), Gaps = 3/222 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWIDDGIVLGVRRHGESSAIVELLTRDHGRHLGLVRGGAGSRMRPLLQPGNSVNALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 61 RLDEHLGAYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEGIFTMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TGVT DL++VSPKSGGAV R G P+ Sbjct: 121 FDHAGGAAIHLIRFELAMLSELGFGLDLSACAATGVTGDLIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFL---WKEEQTIDADSLKSAFQLTDYFLNKYALQ 219 +++L LP FL E+ L F+LT FL ++ L+ Sbjct: 181 DRLLPLPPFLRASHDEQNGCSEQDLLDGFELTGRFLLRHVLE 222 >gi|162139842|ref|YP_318527.2| DNA repair protein RecO [Nitrobacter winogradskyi Nb-255] gi|119361470|sp|Q3SRB6|RECO_NITWN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 262 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 133/228 (58%), Gaps = 15/228 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRTHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 61 RLDEHLGTYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEVIFAMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDRAGGAAIHLIRFELAMLSELGFGLDLSACAATGATGDLIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFL---------WKEEQTIDADSLKSAFQLTDYFLNKYALQ 219 +++L LP FL W E+ +D F+LT FL ++ L+ Sbjct: 181 DRLLPLPPFLRVTHDEQDGWSEQDLLD------GFELTGRFLLRHVLE 222 >gi|91977125|ref|YP_569784.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB5] gi|119361480|sp|Q136V6|RECO_RHOPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91683581|gb|ABE39883.1| DNA replication and repair protein RecO [Rhodopseudomonas palustris BisB5] Length = 249 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 135/222 (60%), Gaps = 3/222 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V WR+ Sbjct: 1 MEWSDEGIILGVRRHGEAGAIVELLTRSHGRHLGLVRGGASSRMRPLLQPGNSVLAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E A +L+SS +YG+ + L R LPER+P ++Y+ML L+ Sbjct: 61 RLDEHLGYYQLEGTRMRAATMLASSHAVYGVTHLASLARLLPERDPHEDIYEMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV R+ G P+ Sbjct: 121 FDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATVELIYVSPKSGSAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQ 219 +K+L LP+FL + + L+ F LT FL + L+ Sbjct: 181 DKLLRLPAFLRDDNDGRNGWSDQDLRDGFDLTGRFLLRNVLE 222 >gi|74420976|gb|ABA05175.1| DNA replication and repair protein RecO [Nitrobacter winogradskyi Nb-255] Length = 278 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 133/228 (58%), Gaps = 15/228 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 17 MEWTDDGIVLGVRRHGESSAIVELLTRTHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 76 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 77 RLDEHLGTYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEVIFAMLERTLDD 136 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R G P+ Sbjct: 137 FDRAGGAAIHLIRFELAMLSELGFGLDLSACAATGATGDLIYVSPKSGGAVSRQAGEPWR 196 Query: 181 EKMLVLPSFL---------WKEEQTIDADSLKSAFQLTDYFLNKYALQ 219 +++L LP FL W E+ +D F+LT FL ++ L+ Sbjct: 197 DRLLPLPPFLRVTHDEQDGWSEQDLLD------GFELTGRFLLRHVLE 238 >gi|307946583|ref|ZP_07661918.1| DNA repair protein RecO [Roseibium sp. TrichSKD4] gi|307770247|gb|EFO29473.1| DNA repair protein RecO [Roseibium sp. TrichSKD4] Length = 256 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 4/237 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+LG R +GE ++ILEVMT YGRHLG VR G+S QP +Q GN ++V WR+ Sbjct: 1 MEWTATGIVLGSRKHGENDVILEVMTETYGRHLGLVRGGRSRTRQPQIQPGNELQVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E L A+L++S L L+G+Q + L R LPER+P LY L + L+ Sbjct: 61 RLPEQLGTYSIEPLRLRAAELMASPLGLHGVQHLGALLRMLPERDPHAALYRALTLVLDQ 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL +GFGLDL+ C TG +DL +VSPKSG AV R G PY Sbjct: 121 LQDGDIGPPLLIRFELELLNELGFGLDLSCCAATGSQEDLAYVSPKSGRAVSRDAGQPYH 180 Query: 181 EKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +K+L LP FL ++ ++ L + F+LT +FL ++ LR+ L Sbjct: 181 DKLLPLPDFLIDGQRQPGSELLFKDLSNGFKLTRFFLARHEKWQTDPAIESLRQQLL 237 >gi|92117771|ref|YP_577500.1| DNA repair protein RecO [Nitrobacter hamburgensis X14] gi|119361468|sp|Q1QL57|RECO_NITHX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91800665|gb|ABE63040.1| DNA replication and repair protein RecO [Nitrobacter hamburgensis X14] Length = 253 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 136/222 (61%), Gaps = 3/222 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRGHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL +S YG+ + L R LPER+P +++ L L+ Sbjct: 61 RLDEHLGAYALEGTRMRAANLLGASHATYGVTHLASLARLLPERDPHDGIFERLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ CV TG T +L++VSPKSGGAV R G P+ Sbjct: 121 FDTAGEAAIHLIRFELAMLTELGFGLDLSTCVATGTTTELIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFLWK--EEQTIDAD-SLKSAFQLTDYFLNKYALQ 219 +++L LP FL + EEQ+ +D L F+LT FL ++ L+ Sbjct: 181 DRLLRLPPFLREADEEQSGWSDQDLLDGFELTGRFLLRHVLE 222 >gi|146341374|ref|YP_001206422.1| DNA repair protein RecO [Bradyrhizobium sp. ORS278] gi|166221887|sp|A4YWC5|RECO_BRASO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146194180|emb|CAL78201.1| putative DNA repair protein RecO (Recombination protein O) [Bradyrhizobium sp. ORS278] Length = 248 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 2/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG+R +GE + ++E++TR++GRHLG VR RM+P+LQ GN VR WR+ Sbjct: 1 MEWTDDGIVLGLRRHGESSAVVELLTREHGRHLGLVRGAAGKRMRPVLQPGNTVRAIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + + L A+L+S+S YG+ + L R LPER+P ++Y L L+ Sbjct: 61 RLDEHLGMYAVDGLTLRAAELMSASHGAYGVTHLASLARLLPERDPHEDMYFRLEHALDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ EL +L +GFGLDL C TG T DL++VSPKSGGAV R+ G P+A Sbjct: 121 FADAGAAAAHIVRFELAILTELGFGLDLESCAATGETSDLIYVSPKSGGAVSRTAGAPWA 180 Query: 181 EKMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL + E+ L F+LT FL ++ L+ RE F+ Sbjct: 181 DRLLPLPPFLRESDEDHGWSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFI 235 >gi|298291623|ref|YP_003693562.1| DNA repair protein RecO [Starkeya novella DSM 506] gi|296928134|gb|ADH88943.1| DNA repair protein RecO [Starkeya novella DSM 506] Length = 243 Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 94/220 (42%), Positives = 128/220 (58%), Gaps = 1/220 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILG+R +GE N I+E+MT +GRHLG VR G S R LQ GN V+ WR+ Sbjct: 1 MEWSDEGIILGLRRHGEGNAIVELMTAAHGRHLGLVRGGGSRRQAAALQPGNGVQATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F EV +L+ ++ + L I L R LPER+P EL+D+L + Sbjct: 61 RLDEHLGTFALEVTTPRAGRLMGAAHSAFALSHIGSLIRMLPERDPHPELHDVLTAMVEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + G + + ELM+L +GFGLDL C TG DLL+VSPKSG AV R G P+ Sbjct: 121 LDEPRLTGMMMARFELMMLSELGFGLDLESCAATGGRNDLLYVSPKSGRAVSRDAGEPWR 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQ 219 ++L LP FL E + + +AF LT +FL + + Sbjct: 181 AQLLNLPYFLIGEVAEPPSPGDVDAAFDLTGHFLARRVFE 220 >gi|209884979|ref|YP_002288836.1| DNA repair protein RecO [Oligotropha carboxidovorans OM5] gi|229470366|sp|B6JGG5|RECO_OLICO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209873175|gb|ACI92971.1| DNA repair protein RecO [Oligotropha carboxidovorans OM5] Length = 249 Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 132/222 (59%), Gaps = 3/222 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD IILG R +GE N I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIILGTRRHGEANAIVELLTRSHGRHLGLVRGGAGTRMRPLLQPGNSVGAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A +LS S YG+ + L R LPER P +Y+ L Sbjct: 61 RLDEHLGYYALEGTRLRAATMLSYSHAAYGITHLAALARLLPERAPHDGIYEQFEAILED 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + V+ E+ +L+ +GFGLDL+ C TG DL++VSPKSG AV RS G P+ Sbjct: 121 FDDPVIAATHVVRFEMAMLEELGFGLDLSCCAATGTHTDLIYVSPKSGCAVSRSAGEPWR 180 Query: 181 EKMLVLPSFL--WKEEQTIDADS-LKSAFQLTDYFLNKYALQ 219 E++L LP+FL EE + D ++ + F+LT FL + L+ Sbjct: 181 ERLLPLPAFLRAGNEESSPDGEADIMEGFRLTGMFLLRNVLE 222 >gi|6655025|gb|AAF22872.1| recO-like protein [Bradyrhizobium japonicum] Length = 250 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 94/221 (42%), Positives = 134/221 (60%), Gaps = 2/221 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSRMRPLLQPGNSVTAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E L+ A LL+SS +YG+ + + R LPER+P E++ +L L+ Sbjct: 61 RLDEHLGTYAVEGLKLRAATLLASSHGVYGVTHLASIARLLPERDPHEEIFGLLEHSLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + EL +L +GFGL L C VTG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDDIGSAAVHVIHFELAMLAELGFGLALDNCAVTGETTDLIYVSPKSGGAVSRGAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTID--ADSLKSAFQLTDYFLNKYALQ 219 +++L LP FL E + L+ F+LT FL ++ L+ Sbjct: 181 DRLLRLPPFLRHGETATELTDQDLQDGFRLTGLFLLRHVLE 221 >gi|27380169|ref|NP_771698.1| DNA repair protein RecO [Bradyrhizobium japonicum USDA 110] gi|30179751|sp|Q9RH67|RECO_BRAJA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|27353323|dbj|BAC50323.1| recO-like protein [Bradyrhizobium japonicum USDA 110] Length = 250 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 94/221 (42%), Positives = 134/221 (60%), Gaps = 2/221 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSRMRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E L+ A LL+SS +YG+ + + R LPER+P E++ +L L+ Sbjct: 61 RLDEHLGTYAVEGLKLRAATLLASSHGVYGVTHLASIARLLPERDPHEEIFGLLEHSLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + EL +L +GFGL L C VTG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDDIGSAAVHVIHFELAMLAELGFGLALDNCAVTGETTDLIYVSPKSGGAVSRGAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTID--ADSLKSAFQLTDYFLNKYALQ 219 +++L LP FL E + L+ F+LT FL ++ L+ Sbjct: 181 DRLLRLPPFLRHGETATELTDQDLQDGFRLTGLFLLRHVLE 221 >gi|316934141|ref|YP_004109123.1| DNA repair protein RecO [Rhodopseudomonas palustris DX-1] gi|315601855|gb|ADU44390.1| DNA repair protein RecO [Rhodopseudomonas palustris DX-1] Length = 250 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 94/223 (42%), Positives = 135/223 (60%), Gaps = 4/223 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR S RM+P+LQ GN V +WR+ Sbjct: 1 MDWSDEGIILGVRRHGEAGAIVELLTRSHGRHLGMVRGAASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL+SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLASSHAVYGVTHLASLARLLPERDPHEEIYHRLILTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV R G P+ Sbjct: 121 FDDLGIAAAHLIRFELAILAELGFGLDLSACAATGATTELIYVSPKSGSAVSRIAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDA----DSLKSAFQLTDYFLNKYALQ 219 +++L LP FL +E ++ L F LT FL + L+ Sbjct: 181 DRLLRLPPFLRDDEAASESGWSGQDLFDGFALTGRFLLRNVLE 223 >gi|118587959|ref|ZP_01545369.1| DNA repair protein RecO [Stappia aggregata IAM 12614] gi|118439581|gb|EAV46212.1| DNA repair protein RecO [Stappia aggregata IAM 12614] Length = 251 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 133/226 (58%), Gaps = 4/226 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W ++L R +GE ++ILE MT +GRHLG VR G+S R +P+LQ GN + + W++ Sbjct: 1 MEWSGRGVVLTTRKHGENDVILEAMTLDHGRHLGLVRGGRSRRHRPVLQPGNELTLTWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL+ +LG+F E L++SSL L LQ + L R LPER L++ L + L+ Sbjct: 61 RLSDHLGQFHIEPETLRAGDLMTSSLGLAALQHLAFLLRLLPERHTYPRLFNALTVVLDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + ++ EL +L+++G GLDL+ C TG +DL +VSPKS AVCR GLPY Sbjct: 121 LEASDAAAALLIRFELEVLRDLGIGLDLSSCAATGSNEDLAYVSPKSARAVCREAGLPYH 180 Query: 181 EKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNI 222 +++L LP FL ++ ++ + F LT +FLN+Y +H Sbjct: 181 DRLLPLPGFLLDGQRQAGSELTWADVTQGFDLTSFFLNRYLQEHGT 226 >gi|323137541|ref|ZP_08072618.1| DNA repair protein RecO [Methylocystis sp. ATCC 49242] gi|322397167|gb|EFX99691.1| DNA repair protein RecO [Methylocystis sp. ATCC 49242] Length = 241 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 93/215 (43%), Positives = 132/215 (61%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +++G R +GE ++ILE+MTRQ+GRHLG VR G+S M+P+LQ GNLV +WR+ Sbjct: 1 MEWRDEGLVIGARKHGETSVILELMTRQHGRHLGVVRGGRSQAMRPVLQPGNLVVASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LG F E L S A+ L L+G+ ++ R LPER+P EL++M + Sbjct: 61 RLEVHLGAFAIEPLASRAARYLDRGAALHGVAALAAWLRLLPERDPYEELFEMADAIACR 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + EL LL +GFGLDL C +TG DL +VSPKSG AV R G P+ Sbjct: 121 LDAADFAAPLMARFELALLGALGFGLDLGACALTGARDDLAYVSPKSGRAVSREAGAPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 E++L P+FL + D + +AF+LT YFL + Sbjct: 181 ERLLPYPAFLREASDVAAVDDVAAAFRLTGYFLTR 215 >gi|319405460|emb|CBI79079.1| DNA repair protein RecO [Bartonella sp. AR 15-3] Length = 248 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 106/230 (46%), Positives = 147/230 (63%), Gaps = 1/230 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEPAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+SH ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDSHASRLIVLPEALYSLQLMASHLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FDDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLCYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR 229 +K+L+LP FL K ID D + LTD+FL +Y + I LR Sbjct: 181 DKLLLLPQFLVQKTACPIDFDDINKGLTLTDFFLTRYVWEARGIKQPSLR 230 >gi|90424142|ref|YP_532512.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB18] gi|119361479|sp|Q214J3|RECO_RHOPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|90106156|gb|ABD88193.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB18] Length = 254 Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 140/242 (57%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G +++P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRGHGRHLGLVRGGAGSKLRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS +YG+ + L R LPER+P E+Y+ L L+ Sbjct: 61 RLDEHLGYYVLEGTRMRAAMLLASSHAVYGVTHLASLARLLPERDPQPEIYERLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL C TGVT DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDVGEAAVHVIRFELTMLAELGFGLDLANCAATGVTSDLIYVSPKSGGAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWK---EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L LP FL + + L+ F LT FL + L+ R+ F+ ++ Sbjct: 181 DKLLRLPPFLREGSAQRNDWSDQDLQDGFLLTGRFLLRNVLEPRGQGHSDARDGFINAVV 240 Query: 238 EL 239 L Sbjct: 241 RL 242 >gi|218670194|ref|ZP_03519865.1| DNA repair protein RecO [Rhizobium etli GR56] Length = 190 Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 85/167 (50%), Positives = 117/167 (70%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKS Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGDRSDLAYVSPKS 167 >gi|299135099|ref|ZP_07028290.1| DNA repair protein RecO [Afipia sp. 1NLS2] gi|298590076|gb|EFI50280.1| DNA repair protein RecO [Afipia sp. 1NLS2] Length = 249 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 93/239 (38%), Positives = 136/239 (56%), Gaps = 3/239 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILG R +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIILGTRRHGESSAIVELLTRSHGRHLGLVRGGAGTRMRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E + A +L+ YG+ + L R LPER P +Y++L L+ Sbjct: 61 RLDEHLGYYAIEGTQLRAATMLACPHAAYGITHLAALARLLPERAPHDGIYELLEAILDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V V+ E+ +L +GFGLDL+ C TG DL++VSPKSG AV R+ G P+ Sbjct: 121 FDEPVVAATHVVRFEMAMLDELGFGLDLSSCAATGAQADLIYVSPKSGCAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 E++L LP FL + A++ + F+LT FL + L+ R+ F+ + Sbjct: 181 ERLLPLPPFLRAGHEDSGAETERDMMEGFRLTGLFLLRNVLEPRGQGHSDARDGFIAAV 239 >gi|158423630|ref|YP_001524922.1| recombination protein O [Azorhizobium caulinodans ORS 571] gi|158330519|dbj|BAF88004.1| recombination protein O [Azorhizobium caulinodans ORS 571] Length = 245 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 92/236 (38%), Positives = 133/236 (56%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D I+LGVR +GE + I+++MTR+ GRH G VR G S R+ +LQ GN + WR+ Sbjct: 1 MEWTDAGIVLGVRRHGETSAIVDLMTRERGRHAGLVRGGGSRRLAALLQPGNTLHATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG E L ++ S+ +G+ +V L R LPER+P L+ L+ L+ Sbjct: 61 RLEGQLGLMTVEPLTLRSDAIMRSAHGSFGVTHLVGLMRLLPERDPHPGLFASLDAILDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++ + E+ LL +GFGLDLT C TG DL +VSP+SG AV RS G PYA Sbjct: 121 FDEPAHAGELLARFEMALLVELGFGLDLTTCAATGGNNDLAYVSPRSGRAVSRSAGEPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+ LP+FL ++ A ++T +FL+ L+ + R +FL L Sbjct: 181 DKLFGLPTFLIGGIVPPSLPDMEEALRMTGFFLSTRVLEPRGLALGEARASFLAAL 236 >gi|144899859|emb|CAM76723.1| DNA repair protein RecO [Magnetospirillum gryphiswaldense MSR-1] Length = 250 Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 94/224 (41%), Positives = 128/224 (57%), Gaps = 3/224 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+L VR GE I+ + TR +GRH G V G + LQ GNLV+ +WR+ Sbjct: 1 MDWTDDGIVLAVRRLGEAGIVASLFTRSHGRHPGMVPGGAGRANRAALQPGNLVQASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL + LG +R E+ E+H AK L + L L S L LPER+P L+D L+ L Sbjct: 61 RLPEQLGTYRLELAEAHSAKALDDAGCLAALTSACALCEALLPERQPHAPLFDALSALLV 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 PS ++V EL LL+ +G+GLDL+ C TG T DL++VSPKS AV G P+ Sbjct: 121 SLTAPSWP-SVYVHWELALLRGLGYGLDLSACAATGATTDLIYVSPKSARAVSAQAGQPH 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNII 223 A K+L LP+FL + + DA + + LT YF+ ++ LQ I Sbjct: 180 AHKLLPLPAFLLGKSEG-DATDIAAGLTLTGYFIERHLLQQRHI 222 >gi|296444472|ref|ZP_06886437.1| DNA repair protein RecO [Methylosinus trichosporium OB3b] gi|296258119|gb|EFH05181.1| DNA repair protein RecO [Methylosinus trichosporium OB3b] Length = 240 Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 91/235 (38%), Positives = 139/235 (59%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +++GVR +GE +ILE+MTR +GRH+G VR G ++ +LQ GN V V WR+ Sbjct: 1 MEWRDEGLVIGVRRHGESAVILELMTRAHGRHMGLVRGGSGRALRSVLQVGNSVEVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F E L S A+L+ + L+G+ + L R LPER+ EL++M + + Sbjct: 61 RLEEHLGAFAVEPLRSRAARLIDRAFALHGVAHLAALLRLLPERDAQRELFEMAELIADR 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + EL LL+ +GFGLD+ +C +TG TQDL +VSPK+G AV R G P+ Sbjct: 121 LDSLDLAPALMARFELALLQALGFGLDVERCALTGATQDLAFVSPKTGRAVTRDAGAPWR 180 Query: 181 EKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +++L P FL DA L +AF+LT +FL + + R ++G Sbjct: 181 DRLLPFPPFLQDCARAPADASELAAAFRLTGHFLARDVFTPRGLEAPQARALYVG 235 >gi|254502661|ref|ZP_05114812.1| DNA repair protein RecO [Labrenzia alexandrii DFL-11] gi|222438732|gb|EEE45411.1| DNA repair protein RecO [Labrenzia alexandrii DFL-11] Length = 244 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 130/220 (59%), Gaps = 4/220 (1%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 ++L R +GE ++ILEVMT GRHLG VR G+S R +P LQ GN + + W++RL+ +LG Sbjct: 1 MVLTTRKHGENDVILEVMTADSGRHLGLVRGGRSKRHRPALQPGNELSLTWKARLSDHLG 60 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 +F+ E + A L++S + L +Q + L R LPER P +Y LN+ L+ Sbjct: 61 QFQIEPHTARAADLMNSGIGLAAVQHLAALVRLLPERHPYPRIYGALNVVLDHLDASDAA 120 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + ++ EL LL+ +G GLDLT C TG T DL +VSP+S AV R G PY +K+L LP Sbjct: 121 AALMIRFELELLQELGAGLDLTSCAATGTTDDLAYVSPRSARAVSREAGRPYHDKLLPLP 180 Query: 188 SFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNII 223 SFL ++ + + FQLT +FL++ + NI Sbjct: 181 SFLLDGQRQAGTELTWQDVTQGFQLTGFFLDRQLGERNIT 220 >gi|217979938|ref|YP_002364085.1| DNA repair protein RecO [Methylocella silvestris BL2] gi|254764645|sp|B8EMP4|RECO_METSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|217505314|gb|ACK52723.1| DNA repair protein RecO [Methylocella silvestris BL2] Length = 247 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 133/218 (61%), Gaps = 5/218 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +I+GVR YGE ++ILE MTR +GRHLG VR G+S RM+ +LQ GN + WR+ Sbjct: 1 MEWRDEGLIIGVRQYGEASVILEAMTRGHGRHLGLVRGGRSQRMRAVLQPGNSAELVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E + A L++S+ L+ + I L R + ER+P +LY+ + + Sbjct: 61 RLDEQLGTWAIEPTQLRAATLMASAEALHAVGLICALLRLIAERDPHPDLYET-AVLIAG 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 H + + V++E+ +L+ GFGLDL++C TG +DL +VSPKSG AV + G PY Sbjct: 120 HIGDERLAPLLVRLEIEILRETGFGLDLSRCAATGAREDLAYVSPKSGRAVSLAAGAPYR 179 Query: 181 EKMLVLPSFLWKEE---QTIDADSLKSAFQLTDYFLNK 215 E++L LP FL E + D L F LT +FL + Sbjct: 180 ERLLPLPPFLRDEAPGGEPTPQDVL-DGFGLTGFFLKR 216 >gi|220923264|ref|YP_002498566.1| DNA repair protein RecO [Methylobacterium nodulans ORS 2060] gi|254764644|sp|B8IL75|RECO_METNO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219947871|gb|ACL58263.1| DNA repair protein RecO [Methylobacterium nodulans ORS 2060] Length = 246 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 97/238 (40%), Positives = 137/238 (57%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ ++LG R +GE +++LE+MT +GRHLG V G+S RMQP+LQ GN VR WR+ Sbjct: 1 MQWSDEGLVLGARRHGETSVVLELMTAGHGRHLGLVHGGRSRRMQPVLQPGNRVRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG F E +ES +L+ S L LYGL L R LPER+P LY + + Sbjct: 61 RLDEGLGHFAVEPIESAAGRLMGSRLALYGLAHAAALLRLLPERDPHPSLYAAAQVLVAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P++ + V+ EL +L ++GFGLDL+ C TG L +VSPKSG AV + G P+ Sbjct: 121 LTDPAIAPALMVRFELAVLADLGFGLDLSACAATGSNAYLAYVSPKSGRAVSAAAGEPWR 180 Query: 181 EKMLVLPSFLWKEE-----QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL E T ++ F LT YFL+++ + RE F+ Sbjct: 181 DRLLALPDFLVAREAGGTGATPTPRDVRQGFTLTGYFLDQHVWHPRGVAPPEARELFV 238 >gi|23014388|ref|ZP_00054207.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 309 Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 130/240 (54%), Gaps = 9/240 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+L VR +GE + ++TR +GRH G V GQ +PILQ GNLVR W Sbjct: 74 MEWDDDGIVLAVRRHGETGAVASLLTRSHGRHAGLVHGGQGRTNRPILQPGNLVRAKWTG 133 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREP---CLELYDMLNI 116 RL + LG F+ E+L ++ A L + L L S L L ER+P C L Sbjct: 134 RLPEQLGNFKLEMLHAYGAAFLDDAARLSALGSACALVETALAERQPHPACHAALVALLH 193 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L PS I+V EL LL+++GFGLDL+ C TG T DL WVSPK+G AV R+ G Sbjct: 194 ALEAESWPS----IYVHFELALLRDLGFGLDLSACAATGQTDDLAWVSPKTGRAVSRAAG 249 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 PY +K+ LP+FL E DA +++ ++T +FL ++ L R +G+L Sbjct: 250 EPYRDKLFKLPAFL-VEGGEGDAAAIREGLEMTGFFLQRHVLDSRHAVLPAARGRMIGRL 308 >gi|170742438|ref|YP_001771093.1| DNA repair protein RecO [Methylobacterium sp. 4-46] gi|168196712|gb|ACA18659.1| DNA repair protein RecO [Methylobacterium sp. 4-46] Length = 267 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 97/238 (40%), Positives = 135/238 (56%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ ++LG R GE ++LE+MT +GRHLG V G+S RMQP+LQ GN VR WR+ Sbjct: 22 MQWSDEGLVLGARRLGETGVVLELMTAAHGRHLGLVHGGRSRRMQPVLQPGNRVRAVWRA 81 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG F E L+S +L+ S L LYGL L R LPER+P LY+ + ++ Sbjct: 82 RLDDGLGSFAVEPLDSAAGRLIGSRLALYGLAHAAALLRLLPERDPHPGLYEAARVLIDH 141 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ + V+ EL +L +GFGLDL+ C TG L +VSPKSG AV + G P+ Sbjct: 142 LADAAIAPPLMVRFELAVLAELGFGLDLSACAATGSNAYLAYVSPKSGRAVSAAAGEPWR 201 Query: 181 EKMLVLPSFLWKEE-----QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL E T A ++ F LT YFL+++ + RE F+ Sbjct: 202 DRLLALPDFLVAREAGGTGATPTARDVRQGFTLTGYFLDQHVWAPRGLAPPEARERFV 259 >gi|319407033|emb|CBI80670.1| DNA repair protein RecO [Bartonella sp. 1-1C] Length = 248 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/230 (44%), Positives = 146/230 (63%), Gaps = 1/230 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDLHASRLIVLPEALYSLQLMAFYLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FEDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLYYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR 229 +K+L+LP FL K +D + + LT++FL +Y I LR Sbjct: 181 DKLLLLPKFLVQKNVYPVDFNDISKGLILTNFFLTRYVWDARGIKQSSLR 230 >gi|319404020|emb|CBI77608.1| DNA repair protein RecO [Bartonella rochalimae ATCC BAA-1498] Length = 248 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/220 (45%), Positives = 143/220 (65%), Gaps = 1/220 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L H ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALNLHASRLIVLPEALYSLQLMAFYLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FEDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLYYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQ 219 +K+L+LP FL K +D + + LT++FL +Y + Sbjct: 181 DKLLLLPQFLVQKSVYPVDFNDISKGLILTNFFLTRYVWE 220 >gi|182679932|ref|YP_001834078.1| DNA repair protein RecO [Beijerinckia indica subsp. indica ATCC 9039] gi|238691211|sp|B2IBG3|RECO_BEII9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|182635815|gb|ACB96589.1| DNA repair protein RecO [Beijerinckia indica subsp. indica ATCC 9039] Length = 250 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 89/217 (41%), Positives = 123/217 (56%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ +I+G+R YGE ILEV T +GRH G VR G R++ +LQ GN WR+ Sbjct: 1 MEWHDEGLIIGLRRYGETGAILEVFTPAHGRHFGLVRGGFGRRLRALLQPGNQADFTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL Q LG E + +L +S L L G+ I L R LPER+P ELY ++ + L Sbjct: 61 RLDQQLGLLAVEPTKLMTTRLFASGLALQGMNLIAALLRLLPERDPHPELYAVVRVLLEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+V + + EL +L GFGLDL+ C TG TQ+L++VSPKSG AV G PY Sbjct: 121 LDEPAVAPILLARFELAMLTETGFGLDLSACAATGATQELIYVSPKSGRAVSARAGAPYH 180 Query: 181 EKMLVLPSFLWKEE--QTIDADSLKSAFQLTDYFLNK 215 +K+L LP F + + +++ F LT +FL + Sbjct: 181 DKLLGLPPFFLDGSLLKNPTLEEVEAGFALTGHFLMR 217 >gi|154247809|ref|YP_001418767.1| DNA repair protein RecO [Xanthobacter autotrophicus Py2] gi|238686793|sp|A7IM67|RECO_XANP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|154161894|gb|ABS69110.1| DNA repair protein RecO [Xanthobacter autotrophicus Py2] Length = 242 Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 88/233 (37%), Positives = 128/233 (54%), Gaps = 1/233 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE N I+E++TR GRHLG VR G S R P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGEGNAIVELLTRLRGRHLGMVRGGASRRQAPLLQPGNTVSATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E L+ + +G + + LPER+P L+ + L+ Sbjct: 61 RLDEHMGNYALEPAVVRTEVLMRAPHAAFGFTHMAQILHLLPERDPHEGLFLTVGAILDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + G++ + EL LL +GFGL+L C TG +DL++VSPKSG AVC G PYA Sbjct: 121 FENRESAGRLLARFELALLAELGFGLELETCAATGRREDLVYVSPKSGRAVCGEAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++ LP FL + A ++ A +LT YFL L+ + R F+ Sbjct: 181 DRLFALPRFL-VDGTAPPAGDVEDALRLTGYFLLTRVLEPRGLGLSDARAAFI 232 >gi|319898694|ref|YP_004158787.1| DNA repair protein RecO [Bartonella clarridgeiae 73] gi|319402658|emb|CBI76204.1| DNA repair protein RecO [Bartonella clarridgeiae 73] Length = 231 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 140/222 (63%), Gaps = 1/222 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQRGRYMGIVKGGRSRRMAFLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H ++L+ LY Q + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDLHASRLIVLPEALYSFQLMASHLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC VG P+ Sbjct: 121 FDDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLCYVSPKSGRAVCEEVGRPWK 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHN 221 +K+L LP FL ++ +D + +K LTD+F N L+ Sbjct: 181 DKLLFLPQFLARKTICPVDFNDIKKGLILTDFFFNTLCLERE 222 >gi|218660067|ref|ZP_03515997.1| DNA repair protein RecO [Rhizobium etli IE4771] Length = 174 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/156 (49%), Positives = 110/156 (70%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 19 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 78 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+++ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 79 RLDEHLGEFRVEPVTLRAARMMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 138 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 P+ G++FV+ EL +L ++GFGLDL +C TG Sbjct: 139 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGA 174 >gi|114770109|ref|ZP_01447647.1| DNA repair protein RecO [alpha proteobacterium HTCC2255] gi|114548946|gb|EAU51829.1| DNA repair protein RecO [alpha proteobacterium HTCC2255] Length = 243 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 131/217 (60%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + +I+ VR YGE ++I++ +T ++GRHLG VR G S +M +Q G+ V++ WR+ Sbjct: 1 MEWTSEGVIVSVRKYGENSVIIDTLTPKHGRHLGVVRGGASRKMAATIQPGSQVKLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG FR E LES + + L L L SI + F PER P ELY+ ++ Sbjct: 61 RLEEHLGNFRVEQLESR-SDMFDDRLRLAALSSICSIVTFSFPERMPVAELYNSTLNLMD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ EL +L+ +GFGLDLT C VT VTQDL++VSPKSG AV R + Sbjct: 120 TLNTGGDWKPLYALWELQVLEEMGFGLDLTSCAVTNVTQDLIYVSPKSGRAVSRKAAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 E++L LPSFL + +T + + + ++ + T +FL+ + Sbjct: 180 KERLLPLPSFLRNKFETANHEDILNSLKTTGHFLSSW 216 >gi|254512349|ref|ZP_05124416.1| DNA repair protein RecO [Rhodobacteraceae bacterium KLH11] gi|221536060|gb|EEE39048.1| DNA repair protein RecO [Rhodobacteraceae bacterium KLH11] Length = 241 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/217 (41%), Positives = 125/217 (57%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MDWRDHGILLTARRHGETAAIIEVFTEGHGRHAGVVRGGTSRKIAPILQPGAQLDVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F+ E L S A S L L GL ++V L F LPEREP +Y ++ Sbjct: 61 RLEEHIGTFQVEPLRSRAAAAFSGRLALAGLNAVVALLSFCLPEREPHPAIYKQTEQLMD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ EL LL+ +GFGLDL+ C VTGVT L++VSPK+G AV R+ + Sbjct: 121 LLGQDEVWPLAYLRWELALLEELGFGLDLSACAVTGVTDGLVYVSPKTGRAVSRAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+K+L LP L E DA + A + T YFL + Sbjct: 181 ADKLLPLPPCLRGEGAAPDA-GIAEALRTTGYFLENH 216 >gi|254485777|ref|ZP_05098982.1| DNA repair protein RecO [Roseobacter sp. GAI101] gi|214042646|gb|EEB83284.1| DNA repair protein RecO [Roseobacter sp. GAI101] Length = 241 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 91/217 (41%), Positives = 122/217 (56%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPTQGRHAGIVRGGTSRKIAPILQPGAQLDVAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S +S L L GL ++ L F LPEREP LY L+ Sbjct: 61 RLEGHIGAFTVEPVRSRAVSAMSDRLSLAGLNTVTALLSFCLPEREPHPPLYHRTQALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q EL LL+ +G+GLDLT C VTG T L++VSPKSG AV R + Sbjct: 121 LLDQGDLWPLAYLQWELSLLEEMGYGLDLTACAVTGATDALVFVSPKSGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+KML LP L E + D D + F+ T YFL ++ Sbjct: 181 ADKMLPLPPVLLGEGEARD-DEILQGFKTTGYFLEQH 216 >gi|114570118|ref|YP_756798.1| DNA repair protein RecO [Maricaulis maris MCS10] gi|114340580|gb|ABI65860.1| DNA repair protein RecO [Maricaulis maris MCS10] Length = 234 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 2/211 (0%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 +L VR +GE + I+EV+T + GRH G VR +S M+PILQ GN + VNWR+RL+++LG Sbjct: 1 MLAVRPHGETSAIVEVLTAEQGRHAGLVRGARSRSMRPILQPGNQITVNWRARLSEHLGM 60 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPSVI 127 F+ E + ++ L GL S + LPERE ++ + L P + Sbjct: 61 FQIEADDLTAGMVMEDRTALAGLNSACAIAVMGLPEREAHPRVHQGFQLLLGAFDNPDIW 120 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 ++V+ E LL ++G+GLD++ C VTGVT+DL +SP++G AVCR PYA K+L LP Sbjct: 121 PALYVRWEAGLLSDLGYGLDMSACAVTGVTEDLTHISPRTGRAVCREEAAPYAPKLLELP 180 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 F+ + I+A + LT YFL + L Sbjct: 181 PFMAGSGK-IEAGDIARGLALTGYFLERRVL 210 >gi|83858198|ref|ZP_00951720.1| DNA repair protein RecO [Oceanicaulis alexandrii HTCC2633] gi|83853021|gb|EAP90873.1| DNA repair protein RecO [Oceanicaulis alexandrii HTCC2633] Length = 242 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 124/219 (56%), Gaps = 2/219 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+ VR +GE + ++EV+T ++GRH G VR G+S M+PILQ GN +R WR+ Sbjct: 1 MEWTASGRIVAVRPHGETSAVIEVLTAEHGRHAGLVRGGRSKAMRPILQPGNRIRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG F E + L+ L L GL + + LPERE + D + ++ Sbjct: 61 RLESHLGGFAVEAEDLSAGVLMEDPLALSGLNAACAMASICLPEREEHPAVADAFEVLIS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + P + ++V+ E LL ++G+GLDL +C TGV L++VSPKSG AV G PY Sbjct: 121 ALEDPDLWPALYVRWEAGLLADLGYGLDLRRCAATGVETGLVYVSPKSGRAVSAEAGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 ++ML LP F+ Q + D + + +LT +F+ + L Sbjct: 181 RDRMLALPGFMKGGGQVSEGD-VGAGLKLTAHFIERRVL 218 >gi|56698028|ref|YP_168399.1| DNA repair protein RecO [Ruegeria pomeroyi DSS-3] gi|61214680|sp|Q5LNK7|RECO_SILPO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56679765|gb|AAV96431.1| DNA repair protein RecO, putative [Ruegeria pomeroyi DSS-3] Length = 241 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 94/241 (39%), Positives = 135/241 (56%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + I++ T +GRH G VR G S R+ PILQ G + ++WR+ Sbjct: 1 MDWRDQGILLAVRRHGETSAIIDTFTASHGRHAGVVRGGTSRRIAPILQPGAQLDLSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG F E L S A +S L L GL ++V L F LPERE LY L+ Sbjct: 61 RLEDHLGSFTVEPLRSRAAAAMSGRLALAGLNAVVSLLSFCLPEREAHPRLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL +GFGLDL+ C VTG + DL++VSP+SG AV + Sbjct: 121 LLGQDEIWPLAYLRWELALLDTLGFGLDLSSCAVTGNSDDLVYVSPRSGRAVSAGAAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 AE++L LP L E D + + A + T +FL ++ + + H L + G+LL+L Sbjct: 181 AERLLPLPPCLRGEGPAPDPE-IAQALRTTGHFL-EHRVAPALGHAPLPQAR--GRLLDL 236 Query: 240 I 240 I Sbjct: 237 I 237 >gi|254461391|ref|ZP_05074807.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2083] gi|206677980|gb|EDZ42467.1| DNA repair protein RecO [Rhodobacteraceae bacterium HTCC2083] Length = 244 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 2/216 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE N I++V T ++GRH G VR G S ++ PILQ G + V+WR+ Sbjct: 1 MEWRDQGILLSVRRHGETNAIIDVFTIEHGRHAGIVRGGTSRKIAPILQPGAQLDVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG + E L S A L L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHLGTYTVEPLRSRAAAALGDRLSLAGLNAVTALLAFALPEREANTRLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ E+ LL+ G GLDL+ C VTG ++L+++SP++G AV V P+ Sbjct: 121 LLGQHEVWPLAYLRFEMALLEACGMGLDLSACAVTGTNENLIYISPRTGRAVSEQVAGPW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 K+L LP L + DA+ ++ A + T YFL++ Sbjct: 181 VNKLLPLPPILIGQGMGSDAE-IEQALRTTGYFLSQ 215 >gi|260432760|ref|ZP_05786731.1| DNA repair protein RecO [Silicibacter lacuscaerulensis ITI-1157] gi|260416588|gb|EEX09847.1| DNA repair protein RecO [Silicibacter lacuscaerulensis ITI-1157] Length = 241 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MDWRDHGILLTARRHGETAAIIEVFTETHGRHAGVVRGGASRKIAPILQPGAQLDVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +++G F+ E L S A S L L GL ++V L FLPEREP +Y ++ Sbjct: 61 RLQEHIGTFQVEPLRSRAAAAFSGRLALSGLNAVVALLSFFLPEREPHPGIYRQTEQLMD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+ +GFGLDLT+C VTG T+ L +VSPK+G AV + Sbjct: 121 LLGQDEIWPLAYLRWELALLEELGFGLDLTRCAVTGTTEGLAYVSPKTGRAVSAEGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL 213 A+++L LP L + D D + + + T YFL Sbjct: 181 ADRLLPLPPVLRGQGGAPD-DEIAAGLRTTGYFL 213 >gi|300023747|ref|YP_003756358.1| DNA repair protein RecO [Hyphomicrobium denitrificans ATCC 51888] gi|299525568|gb|ADJ24037.1| DNA repair protein RecO [Hyphomicrobium denitrificans ATCC 51888] Length = 239 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 128/219 (58%), Gaps = 1/219 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AI+L V+ +GE ++E+ TR +GRHLG V G+S R++PILQ GN V W++ Sbjct: 1 MQWTDEAIVLSVKPHGETAAVIELWTRTHGRHLGLVHGGRSRRLRPILQPGNHVDATWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL+ LG E+ + A+ L + L L ++ L LPER+P LY++ L Sbjct: 61 RLSDQLGHVTIEMRRAFAAETLDDAAALAALSTLTTLTHLLPERDPHPNLYEITLFVLGF 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +V + V+ EL LL+ +GFGLDL++C TG L++VSP++G AV S G PY Sbjct: 121 LNDATVWPALLVRWELALLEELGFGLDLSQCAATGSNDQLIYVSPRTGRAVSASAGEPYR 180 Query: 181 EKMLVLPSFLWKEEQT-IDADSLKSAFQLTDYFLNKYAL 218 +K+L LP+FL K + D ++ F LT +FL L Sbjct: 181 DKLLPLPAFLTKHRSGHVTEDDIRLGFALTGHFLETRVL 219 >gi|302383088|ref|YP_003818911.1| DNA repair protein RecO [Brevundimonas subvibrioides ATCC 15264] gi|302193716|gb|ADL01288.1| DNA repair protein RecO [Brevundimonas subvibrioides ATCC 15264] Length = 243 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 123/217 (56%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + ++A +L R++G+ ++++++T +GRH +V G S RM+P LQAG V ++R+ Sbjct: 1 MEFHEEAFVLSARAHGDTGVVVDLLTETHGRHAAYVAGGASRRMKPFLQAGARVIADYRA 60 Query: 61 RLAQNLGEFRFE-VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + +LG R E V E A + LPEREP + ++ Sbjct: 61 RTSDHLGSARLEPVGEGPSALFDDGLALAGLSAAAAVAQGALPEREPHPGAFLAFEALMS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +IP+V IFV+ E LL+++GFGLDL++C VTG DL+WVSP++G +V S G PY Sbjct: 121 AFQIPAVWPAIFVRFEAGLLEDLGFGLDLSRCAVTGTMDDLVWVSPRTGRSVSASAGAPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+K+L LP F+ + + +K LT +FL ++ Sbjct: 181 ADKLLKLPPFMLGAQAGLRDGDVKDGLDLTGHFLEQF 217 >gi|254466686|ref|ZP_05080097.1| DNA repair protein RecO [Rhodobacterales bacterium Y4I] gi|206687594|gb|EDZ48076.1| DNA repair protein RecO [Rhodobacterales bacterium Y4I] Length = 241 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 123/217 (56%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + I++V T +GRH G VR G RM PILQ G + V WR+ Sbjct: 1 MEWRDHGILLSVRRHGESSAIIDVFTEGHGRHAGVVRGGAGRRMAPILQPGAQLDVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG + E L S A LS L L GL ++ L F LPEREP +LY L+ Sbjct: 61 RLEDHLGSYHAEPLRSRAAAALSGRLALAGLNTVTALLSFCLPEREPHPDLYTRSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+ +GFGLDL+ C VTG L ++SPK+G AV R + Sbjct: 121 LLGNEDLWPLAYLRWELALLEEMGFGLDLSACAVTGSRFGLAYISPKTGRAVSREGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+++L LP + + DA+ ++ A + T +FL + Sbjct: 181 ADRLLPLPPVMLGQGSAADAEIVQ-ALRATGFFLEAH 216 >gi|209964784|ref|YP_002297699.1| DNA repair protein RecO, putative [Rhodospirillum centenum SW] gi|238058647|sp|B6IMY9|RECO_RHOCS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209958250|gb|ACI98886.1| DNA repair protein RecO, putative [Rhodospirillum centenum SW] Length = 250 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/234 (38%), Positives = 126/234 (53%), Gaps = 7/234 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DDAI+L R +GE + ++TR +GRH G V GQS RM+P+L+ GN V W + Sbjct: 1 MEWTDDAIVLSARPHGETAALAVLLTRGHGRHAGLVHGGQSGRMRPVLEPGNRVAARWAA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 RL + LG E+ + A LL L L L S L LPEREP L+D + Sbjct: 61 RLVEQLGTLALELERATAAGLLEDPLRLAALSSACALVDAALPEREPHPALFDATLALFD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + V +I+V+ E+ LL+ GFGLD C TG+T + L +VSP++G AV S G Sbjct: 121 ALQT-EVWAEIYVRWEIGLLEEAGFGLDFGSCAATGITDNDQLAYVSPRTGRAVSLSAGE 179 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK--YALQHNIIHCHLLR 229 PY +++L LP FL A+ + LT +FL++ +AL+H + R Sbjct: 180 PYRDRLLALPPFLVGRSAG-GAEEVVQGLALTGHFLDRHLFALRHAEVPAARTR 232 >gi|154253316|ref|YP_001414140.1| DNA repair protein RecO [Parvibaculum lavamentivorans DS-1] gi|154157266|gb|ABS64483.1| DNA repair protein RecO [Parvibaculum lavamentivorans DS-1] Length = 234 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 82/209 (39%), Positives = 121/209 (57%), Gaps = 1/209 (0%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 +L R++GE ILE+ TR+ GRHLG V G RM+ +LQ GN + +WR RL+++LG Sbjct: 1 MLSARAHGETGAILELFTREQGRHLGLVHGGAGRRMRSVLQPGNKLAAHWRGRLSEHLGT 60 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG 128 ++ E+++ L+ L L GL + + LPERE LYD + L+ + V Sbjct: 61 YQVELVKPLAGLLMDDPLALLGLSAASAICSILPEREAHPALYDGYEVLLDTMRDEDVWP 120 Query: 129 KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS 188 +FV+ EL LL+ +GFGLDLT+C TG DL +VSP+SG AV R G Y E++ LP Sbjct: 121 AVFVRWELGLLQELGFGLDLTQCAATGSRDDLAYVSPRSGSAVSRGAGEIYKERLFRLPG 180 Query: 189 FL-WKEEQTIDADSLKSAFQLTDYFLNKY 216 FL + +A + +LT +FL ++ Sbjct: 181 FLVGSQAGAAEAADVAEGLRLTGHFLERH 209 >gi|312115948|ref|YP_004013544.1| DNA repair protein RecO [Rhodomicrobium vannielii ATCC 17100] gi|311221077|gb|ADP72445.1| DNA repair protein RecO [Rhodomicrobium vannielii ATCC 17100] Length = 241 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I L R +GE ++I ++ TR GR G V+ G+S R++P+LQ GN + V WR+ Sbjct: 1 MRWADDGIFLAGRPHGETSVIADIFTRANGRAKGLVKGGRSRRLRPLLQTGNTLGVEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E+ + A L L G+ ++ L + L ER+P LYD L Sbjct: 61 RLDDQLGVYTVELARATAANALDDPSALAGMTALAALLQVLAERDPHPALYDAAQDCL-A 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 H + F++ EL L +GFGL+L C TG DL++VSPKSG AVCR G PYA Sbjct: 120 HASDASFPAAFIRFELRFLNELGFGLNLATCAATGRADDLIYVSPKSGQAVCREAGEPYA 179 Query: 181 EKMLVLP 187 +++L LP Sbjct: 180 DRLLPLP 186 >gi|83941547|ref|ZP_00954009.1| DNA repair protein RecO, putative [Sulfitobacter sp. EE-36] gi|83847367|gb|EAP85242.1| DNA repair protein RecO, putative [Sulfitobacter sp. EE-36] Length = 245 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 120/217 (55%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPERGRHAGIVRGGTSRKIAPILQPGAQLDIAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGAFTVEPVRSRAALAMHDRLSLAGLNAVTGLLAFALPEREAHAPLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL +G+GLDL+ C VTG T L++VSPK+G AV R + Sbjct: 121 LLGQGDLWPLAYLQWEISLLDELGYGLDLSACAVTGRTSGLVFVSPKTGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +KML L L E DAD + AF+ T YFL ++ Sbjct: 181 VDKMLPLSPVLRGEGDASDAD-IALAFKTTGYFLERH 216 >gi|163793044|ref|ZP_02187020.1| GTP-binding protein Era [alpha proteobacterium BAL199] gi|159181690|gb|EDP66202.1| GTP-binding protein Era [alpha proteobacterium BAL199] Length = 253 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 122/218 (55%), Gaps = 5/218 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W D+ I+L +++GE + I+ ++TR +GRH G VR S R + + Q GN V WR+RL Sbjct: 4 WTDEGIVLAAKAHGEGSAIVVLLTRDHGRHAGLVRGAFSGRARGVYQPGNRVTAEWRARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 A +LG + E+ H A +L L L GL + + LPEREP +++D L L+ Sbjct: 64 ADHLGNYTCELGHGHAAAVLDDPLKLAGLSAACAIAEASLPEREPHPQVHDGLVALLDAM 123 Query: 122 KIPSVIG---KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P + ++V+ E+ +L ++G+GLDL C TG DL +VSP++G AV + G P Sbjct: 124 AEPELGDAWIAVYVRWEIGVLADLGYGLDLESCAATGANDDLAYVSPRTGRAVSLAAGEP 183 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 Y +++L LP FL D D L L+ +F+ ++ Sbjct: 184 YRDRLLSLPRFLIGRGGG-DQDDLFRGLALSGFFMERH 220 >gi|83855024|ref|ZP_00948554.1| DNA repair protein RecO [Sulfitobacter sp. NAS-14.1] gi|83842867|gb|EAP82034.1| DNA repair protein RecO [Sulfitobacter sp. NAS-14.1] Length = 245 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 120/217 (55%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPERGRHAGIVRGGTSRKIAPILQPGAQLDIAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGAFTVEPVRSRAALAMHDRLSLAGLNAVTGLLAFALPEREAHPPLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL +G+GLDL+ C VTG T L++VSPK+G AV R + Sbjct: 121 LLGQGDLWPLAYLQWEISLLDELGYGLDLSACAVTGRTSGLVFVSPKTGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +KML L L E DAD + AF+ T YFL ++ Sbjct: 181 VDKMLPLSPVLRGEGDASDAD-IALAFKTTGYFLERH 216 >gi|254420124|ref|ZP_05033848.1| DNA repair protein RecO [Brevundimonas sp. BAL3] gi|196186301|gb|EDX81277.1| DNA repair protein RecO [Brevundimonas sp. BAL3] Length = 243 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 121/217 (55%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + ++A +L R++G+ +++++T +GR +V G S +M+P LQAG V ++R+ Sbjct: 1 MDFHEEAFVLSARAHGDTGAVVDLLTESHGRRAAYVAGGASRKMRPFLQAGARVVADYRA 60 Query: 61 RLAQNLGEFRFE-VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + +LG R E V E A + + LPEREP ++ + Sbjct: 61 RTSDHLGGARLEPVGEGPSALFDDALALTGLAAAAGVAQGALPEREPHPGVFLAFEALMA 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +P V IFV+ E LL+++GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 121 AFALPDVWPAIFVRFEAGLLEDLGFGLDLSKCAATGTADDLIYVSPRTGRAVSREAGAPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+KML LP F+ + + +++ F LT +FL ++ Sbjct: 181 ADKMLSLPPFMLGAQAGLVEGDVRAGFDLTGHFLEQF 217 >gi|315499944|ref|YP_004088747.1| DNA repair protein reco [Asticcacaulis excentricus CB 48] gi|315417956|gb|ADU14596.1| DNA repair protein RecO [Asticcacaulis excentricus CB 48] Length = 239 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 118/217 (54%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++DDA +L R +GE ++ +T ++G V G S R++P LQ + VR+++R+ Sbjct: 1 MTFEDDAFVLSARPHGETGAVVHFLTLEHGHIAAHVPGGASRRLKPYLQPASRVRLSYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 R A LG E A++ + L G+Q + R LPERE + +N Sbjct: 61 RTADQLGSATLEPEGDATAEIFDDPMALIGVQCACVMTRAVLPEREAYPGAFYAFETLIN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +P V ++V+ E+ LL+ +GFGLDL+ C V+G DL +VSP+S AV R G PY Sbjct: 121 AFGLPGVWPYVYVRFEMGLLEAVGFGLDLSACAVSGSRDDLAYVSPRSARAVSRREGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +K+L LP FL + + AD L+ LT +FL ++ Sbjct: 181 KDKLLPLPGFLLSSQGGVQADDLRRGLDLTGFFLERH 217 >gi|163740179|ref|ZP_02147573.1| DNA repair protein RecO [Phaeobacter gallaeciensis 2.10] gi|161386037|gb|EDQ10412.1| DNA repair protein RecO [Phaeobacter gallaeciensis 2.10] Length = 241 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 2/216 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ I+L +R +GE I++ T ++GRH G VR G RM P+LQ G + + WR+ Sbjct: 1 MEWRDEGILLTMRRHGESAAIVDAFTAEHGRHAGIVRGGAGRRMAPVLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S A +SS L L GL ++ L F LPERE ELY L+ Sbjct: 61 RLEDHLGSYQAELIRSRAATAMSSRLALAGLNAVTALLAFCLPEREAHPELYLRSTQILD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL+ +GFGL+ +C VTG DL++VSPKSG AV R + Sbjct: 121 LLGRDDIWPLAYLRWEVALLEEMGFGLEFEQCAVTGSRLDLIYVSPKSGRAVSRRGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A++ML LP L +++ + +A T +FL Sbjct: 181 ADRMLPLPPVLMGRGGAENSE-IVTALSTTGFFLQN 215 >gi|163738241|ref|ZP_02145657.1| DNA repair protein RecO [Phaeobacter gallaeciensis BS107] gi|161388857|gb|EDQ13210.1| DNA repair protein RecO [Phaeobacter gallaeciensis BS107] Length = 241 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 2/216 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ I+L +R +GE I++ T ++GRH G VR G RM P+LQ G + + WR+ Sbjct: 1 MEWRDEGILLTMRRHGESAAIVDAFTAEHGRHAGIVRGGAGRRMAPVLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S A +SS L L GL ++ L F LPERE ELY L+ Sbjct: 61 RLEDHLGSYQAELIRSRAATAMSSRLALAGLNAVTALLAFCLPEREAHPELYLRSTQILD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL+ +GFGL+ +C VTG DL++VSPKSG AV R + Sbjct: 121 LLGRDDIWPLAYLRWEVALLEEMGFGLEFEQCAVTGSRLDLIYVSPKSGRAVSRRGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A++ML LP L +++ + +A T +FL Sbjct: 181 ADRMLPLPPVLMGRGGAENSE-IVTALSTTGFFLQN 215 >gi|255263314|ref|ZP_05342656.1| DNA repair protein RecO [Thalassiobium sp. R2A62] gi|255105649|gb|EET48323.1| DNA repair protein RecO [Thalassiobium sp. R2A62] Length = 242 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 120/215 (55%), Gaps = 2/215 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W+D+ +L VR +GE I+E+ T ++GRH G VR G S ++ PILQ G + V W++RL Sbjct: 4 WRDEGALLSVRRHGESAAIVEIFTAEHGRHAGIVRGGTSRKIAPILQPGAQLDVVWKARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 ++LG F E + S A ++S L L GL ++ L F +PERE LY + ++ Sbjct: 64 EEHLGSFSVEPVRSRAAAVMSDRLALAGLNAVCALLAFAMPEREAHPSLYRQSTVLMDLL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 +++ EL LL+ +GFGLDL C VTG + L +VSPKSG AV +A+ Sbjct: 124 GNTDAWPLAYLRWELALLEELGFGLDLGSCAVTGSVEGLCYVSPKSGRAVSAEGAGEWAD 183 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 ++L LP L DA+ L+ + T YFL + Sbjct: 184 RLLPLPDVLLGVGSAPDAEILQ-GLETTGYFLEHW 217 >gi|163744852|ref|ZP_02152212.1| DNA repair protein RecO [Oceanibulbus indolifex HEL-45] gi|161381670|gb|EDQ06079.1| DNA repair protein RecO [Oceanibulbus indolifex HEL-45] Length = 240 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 3/217 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ P LQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPEQGRHAGIVRGGTSRKIAPSLQPGAQLDLAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E L S A + L L GL ++ L F LPEREP LY L+ Sbjct: 61 RLEDHIGAFTVEPLRSRAAVAMQDRLALAGLNAVTALLSFCLPEREPHPALYRRTETLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ EL LL+ +G+ LDL C VTGV++DL++VSPKSG AV + Sbjct: 121 MLGQGDVWPLAYLKWELRLLEEMGYALDLESCAVTGVSEDLIYVSPKSGRAVSAKGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 AE++L LP+ L + DA+ + T +FL + Sbjct: 181 AERLLPLPAVL-RGGAGSDAE-IAQGLVTTGHFLTAH 215 >gi|89070889|ref|ZP_01158124.1| DNA repair protein RecO, putative [Oceanicola granulosus HTCC2516] gi|89043528|gb|EAR49739.1| DNA repair protein RecO, putative [Oceanicola granulosus HTCC2516] Length = 239 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 83/217 (38%), Positives = 119/217 (54%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D ++L R +GE +I EV T GRH G VR G+S ++ P+LQ G V V W + Sbjct: 1 MQWRDGGVLLARRGHGESGVIAEVFTETRGRHAGLVRGGRSKQLAPVLQPGEQVEVTWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG +R E L S A +++ L L GL +I L F LPEREP LY L+ Sbjct: 61 RLEEHLGAYRVEPLRSRAALVMNDRLALAGLNAICGLLAFALPEREPHPALYARSVTLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ EL LL+ +GFGLDL+ C VTG L +VSP++G AV + + Sbjct: 121 LLGRTDAWPLAYLHWELALLEELGFGLDLSSCAVTGAEDGLAFVSPRTGRAVSAAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A ++L LP L + DA+ L+ + T +FL + Sbjct: 181 AGRLLPLPPALRGQGPGPDAEILEG-LRTTGHFLATW 216 >gi|149913474|ref|ZP_01902007.1| DNA repair protein RecO [Roseobacter sp. AzwK-3b] gi|149812594|gb|EDM72423.1| DNA repair protein RecO [Roseobacter sp. AzwK-3b] Length = 244 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 3/218 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R++GE ++I+EV T ++GRH G VR G S ++ P+LQ G + + WR+ Sbjct: 1 MEWRDQGILLSTRTHGETSVIIEVFTPEHGRHAGVVRGGTSRKLAPVLQPGAQLDLRWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LP+RE LY L+ Sbjct: 61 RLEDHIGTFTVEPVRSRAAASMGDRLSLAGLNAVTALLLFCLPDREAHRRLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLP 178 V ++ E+ LL +GFGLDL+ C V G DL +VSP+SG AV R+ Sbjct: 121 LLGQGDVWPLAYLNWEMALLDEMGFGLDLSGCAVMGPQANDLSYVSPRSGRAVSRAGAGE 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +A+++L LP+ L DA+ + FQ+T +FL + Sbjct: 181 WADRLLPLPACLLGAGPAPDAE-VAEGFQVTGHFLQNH 217 >gi|221641177|ref|YP_002527439.1| DNA repair protein RecO [Rhodobacter sphaeroides KD131] gi|332560104|ref|ZP_08414426.1| DNA repair protein RecO [Rhodobacter sphaeroides WS8N] gi|254764657|sp|B9KSB0|RECO_RHOSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|221161958|gb|ACM02938.1| DNA repair protein recO [Rhodobacter sphaeroides KD131] gi|332277816|gb|EGJ23131.1| DNA repair protein RecO [Rhodobacter sphaeroides WS8N] Length = 239 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E L S A LL L L GL +I + LPEREP L+ L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTA-LLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV R + Sbjct: 121 ALDRPGWP-PAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSRGAAGGW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A+++ LP L + A+ ++ +T +FL + Sbjct: 180 ADRLFPLPLALLG-QGPASAEEVRQGLAITGHFLGR 214 >gi|126461085|ref|YP_001042199.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17029] gi|166221908|sp|A3PGG1|RECO_RHOS1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|126102749|gb|ABN75427.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17029] Length = 239 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E L S A LL L L GL +I + LPEREP L+ L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTA-LLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV R + Sbjct: 121 ALDRPGWP-PAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSRGAAGGW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A+++ LP L + A+ ++ +T +FL + Sbjct: 180 ADRLFPLPLALLG-QGPASAEEVRQGLAITGHFLGR 214 >gi|254476248|ref|ZP_05089634.1| DNA repair protein RecO [Ruegeria sp. R11] gi|214030491|gb|EEB71326.1| DNA repair protein RecO [Ruegeria sp. R11] Length = 241 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 2/215 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L +R +GE + I+++ T ++GRH G +R G S +M PILQ G + + WR+ Sbjct: 1 MEWRDQGILLRMRRHGEGSAIVDMFTAEHGRHAGVIRGGASRKMAPILQPGAQLDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S LS L L GL ++ L F LP+REP +LY L+ Sbjct: 61 RLEDHLGSYQAELMRSRAGAALSGRLALAGLNAVTGLLAFCLPDREPHPDLYLRSERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL+ +GFGLDL+ C V+G +L+++SPKSG AV R+ + Sbjct: 121 LLGQDEIWPLAYLQWEMALLEELGFGLDLSCCAVSGALDELIYISPKSGRAVSRASAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 A ++L LP+ + E + + L+ T +FL Sbjct: 181 AHRLLPLPAVMRGEGEAGTGEILQ-GLSTTGFFLE 214 >gi|149200802|ref|ZP_01877777.1| DNA repair protein RecO [Roseovarius sp. TM1035] gi|149145135|gb|EDM33161.1| DNA repair protein RecO [Roseovarius sp. TM1035] Length = 244 Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 84/218 (38%), Positives = 124/218 (56%), Gaps = 4/218 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE ++I+EV T + GRH G VR G S +M P+LQ G + + WR+ Sbjct: 1 MDWRDQGILLNSRRHGESSVIIEVFTPERGRHAGVVRGGASRKMAPVLQPGAQLDLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G FR E L+S A + + L GL ++ L F LPERE ELY I L+ Sbjct: 61 RLEDHIGTFRVEPLKSR-AWTMGDRMALAGLNAVCALLLFVLPEREAHAELYRKTLILLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLP 178 P + ++ E+ LL+ +GFGLDL +C V G DL ++SPK+G AV R+ Sbjct: 120 ILDQPEIWTLAYLNWEMALLEEMGFGLDLRRCAVLGEKANDLSYISPKTGRAVSRAGAGE 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +A+++L LP L D + L+ F++T FL + Sbjct: 180 WADRLLPLPPCLMGHGPAPDGEILQG-FEVTGQFLRNH 216 >gi|197105330|ref|YP_002130707.1| recombinational DNA repair protein (RecF pathway) [Phenylobacterium zucineum HLK1] gi|254764651|sp|B4RCU1|RECO_PHEZH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|196478750|gb|ACG78278.1| recombinational DNA repair protein (RecF pathway) [Phenylobacterium zucineum HLK1] Length = 243 Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++DDA +L R++GE I+E++T +GR+ V G S +++P LQ G V +R+ Sbjct: 1 MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRA 60 Query: 61 RLAQNLGEFRFE-VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R++ LG E V E A + LPEREP + Sbjct: 61 RVSDQLGSAAIEPVGEGPAALFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P V +FV+ E LL+++GFGLDL+KC TG+T DL+WVSP++G AV R G PY Sbjct: 121 ALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDDLVWVSPRTGRAVSRQAGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +++L LP FL + + A + + LT +FL + Sbjct: 181 KDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAF 217 >gi|119370511|sp|Q3J5V8|RECO_RHOS4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 238 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 1 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E L S A LL L L GL +I + LPEREP L+ + L+ Sbjct: 61 RLDEHMGAFTVEPLRSRTA-LLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMVLLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV + Sbjct: 120 ALDRPGWP-PAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSSGAAGGW 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A+++ LP L + A+ ++ +T +FL + Sbjct: 179 ADRLFPLPLALLG-QGPASAEEVRQGLAITGHFLGR 213 >gi|77462223|ref|YP_351727.1| DNA repair protein RecO [Rhodobacter sphaeroides 2.4.1] gi|77386641|gb|ABA77826.1| putative RecO protein [Rhodobacter sphaeroides 2.4.1] Length = 239 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E L S A LL L L GL +I + LPEREP L+ + L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTA-LLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMVLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV + Sbjct: 121 ALDRPGWP-PAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSSGAAGGW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A+++ LP L + A+ ++ +T +FL + Sbjct: 180 ADRLFPLPLALLG-QGPASAEEVRQGLAITGHFLGR 214 >gi|99082396|ref|YP_614550.1| DNA repair protein RecO [Ruegeria sp. TM1040] gi|119361485|sp|Q1GDH8|RECO_SILST RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|99038676|gb|ABF65288.1| DNA repair protein RecO [Ruegeria sp. TM1040] Length = 241 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 2/216 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + ++EV T +G H G VR G S +M P LQ G + + W + Sbjct: 1 MDWRDQGILLTVRRHGESSALIEVFTEDHGLHAGLVRGGASRKMAPHLQPGAQLDLTWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E L S LS L L GL ++ L F LP+R P LY + L+ Sbjct: 61 RLEDHLGTYKAEPLRSRAGMALSGRLALAGLNAVCALLAFALPDRAPYPALYHRSSALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+++G+GLDL+ C TGVTQDL +VSPK+G AV + + Sbjct: 121 LLDSEDLWPLAYLRWELSLLEDLGYGLDLSACAATGVTQDLRYVSPKTGRAVSGAAAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A+++L LP + E D + L +A + T +FL Sbjct: 181 ADRLLPLPPVMRGEGAAEDIEIL-TALRTTGFFLES 215 >gi|259418038|ref|ZP_05741957.1| DNA repair protein RecO [Silicibacter sp. TrichCH4B] gi|259346944|gb|EEW58758.1| DNA repair protein RecO [Silicibacter sp. TrichCH4B] Length = 241 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 2/216 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + ++EV T+ +GRH G VR G S +M P LQ G + + W + Sbjct: 1 MDWRDQGILLTVRRHGESSALIEVFTQAHGRHAGLVRGGASRKMAPHLQPGAQLDLTWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E L S A LS L L GL ++ L F LP+RE ELY L+ Sbjct: 61 RLEDHLGTYKAEPLRSRAASALSGRLALSGLNAVCALLAFALPDREAYSELYHRSEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+++G+GLDL+ C VTG T+ L++VSPK+G AV + + Sbjct: 121 LLDNEDLWPLGYLRWELSLLEDLGYGLDLSCCAVTGATEGLMYVSPKTGRAVSEAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A+++L LP + E D + L +A + T +F Sbjct: 181 ADRLLPLPPVMRGEGDGEDIEIL-TALRTTGFFFES 215 >gi|126739720|ref|ZP_01755412.1| DNA repair protein RecO [Roseobacter sp. SK209-2-6] gi|126719366|gb|EBA16076.1| DNA repair protein RecO [Roseobacter sp. SK209-2-6] Length = 251 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 2/213 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W+D I+L R +GE + I++V T ++GRH G VR G S R+ PILQ G + + WR+RL Sbjct: 13 WRDHGILLSARRHGESSAIIDVFTEEHGRHAGVVRGGASRRLAPILQPGAQLDLLWRARL 72 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 ++LG ++ E L S +S L L GL ++ L F LPEREP LY L+ Sbjct: 73 EEHLGSYQAEPLRSRAVAAMSGRLALSGLNAVTALLGFCLPEREPHPALYASSERLLDLL 132 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + +++ E+ LL+ +GFGLDL C V+G ++L +VSP++G AV R P+ Sbjct: 133 EQEELWPLAYLRWEMELLEEMGFGLDLLACAVSGRNEELAYVSPRTGRAVSRQEAGPWVA 192 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 ++L LP + + + D + + + T YFL Sbjct: 193 RLLPLPPVMLGKGEAPDHE-IAEGLKTTGYFLE 224 >gi|254293710|ref|YP_003059733.1| DNA repair protein RecO [Hirschia baltica ATCC 49814] gi|254042241|gb|ACT59036.1| DNA repair protein RecO [Hirschia baltica ATCC 49814] Length = 290 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 118/215 (54%), Gaps = 2/215 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W D AI LG R++GE ++IL+V T GR G V G S + +P+++AGN + V W+++ Sbjct: 4 WSDTAISLGARTFGETDVILDVFTPSRGRTRGLVYGGISQKKRPMIEAGNTIDVQWKAKT 63 Query: 63 AQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNC 120 +LG F + + A+ + L L GL ++ + R LPE E LY+ L+ Sbjct: 64 ESSLGHFSVADAINQRAARCMIDPLALAGLSAVTSILRDGLPEGEAKDGLYEATETLLDV 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + IF++ EL L+ +G+GL+L CV++G L VSPKSG AV S Y Sbjct: 124 MGEPDIWPAIFIKWELGFLQQMGYGLNLETCVISGANDGLTHVSPKSGCAVRGSEAEEYI 183 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 +K+L LP+FL + + + F+LT YFL + Sbjct: 184 DKLLSLPAFLTDAKAPPSPYDIGAGFKLTGYFLTR 218 >gi|85705116|ref|ZP_01036216.1| DNA repair protein RecO [Roseovarius sp. 217] gi|85670438|gb|EAQ25299.1| DNA repair protein RecO [Roseovarius sp. 217] Length = 244 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 89/239 (37%), Positives = 130/239 (54%), Gaps = 5/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE +I+EV T + GRH G VR G S +M PILQ G + + WR+ Sbjct: 1 MDWRDQGILLSSRRHGESAVIIEVFTPERGRHAGVVRGGASRKMAPILQPGAQLDLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G FR E + S A +L + L L GL ++ L F LPERE LY+ L+ Sbjct: 61 RLEDHIGTFRVEPVRSR-AGVLGNPLTLAGLNAVCALLLFALPEREAHGALYERTETLLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLP 178 V ++ EL LL+++GFGLDL+ C V G DL ++SP++G AV R+ Sbjct: 120 LLAESEVWPLAYLHWELALLEDLGFGLDLSTCAVMGEKANDLSYISPRTGRAVSRAGAGE 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY-ALQHNIIHCHLLRENFLGKL 236 + +K+L LP L DA+ L+ +T +FL + A Q RE F+ ++ Sbjct: 180 WVDKLLPLPPCLMGHGPAPDAEILQ-GLTVTGHFLRTHLAPQMRNKPLPEARERFVARM 237 >gi|126733738|ref|ZP_01749485.1| DNA repair protein RecO [Roseobacter sp. CCS2] gi|126716604|gb|EBA13468.1| DNA repair protein RecO [Roseobacter sp. CCS2] Length = 244 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 116/213 (54%), Gaps = 2/213 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W+ +A +L R +GE +I+EV + +GRH G VR G S ++ P+LQ G + V W++RL Sbjct: 4 WRSEAALLSSRPFGENGVIIEVFSALHGRHAGVVRGGASRKLAPVLQPGAQLSVAWKARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 +LG F E + S A + L L GL ++ L LPERE LY+ L+ Sbjct: 64 ESHLGSFAVEPIRSRAAAAMGDRLALAGLNAVCSLLAMVLPEREAHEPLYERTIALLDLL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 V +++ E LL+ +GF +DL+ C V GV +DL++VSPKSG AV R +A+ Sbjct: 124 GQQDVWPLAYLRWEQALLEEMGFAMDLSACAVRGVNEDLIYVSPKSGRAVSREAAGEWAD 183 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 +ML LP L + +A K A T YF+ Sbjct: 184 RMLPLPEVLTGKGDASNAQIAK-ALGTTGYFIE 215 >gi|163733859|ref|ZP_02141301.1| DNA repair protein RecO [Roseobacter litoralis Och 149] gi|161392970|gb|EDQ17297.1| DNA repair protein RecO [Roseobacter litoralis Och 149] Length = 241 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 119/217 (54%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWREEGILLSTRRHGESAAIIEVFTPSHGRHAGVVRGGTSRKIAPILQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGSFHVEPVRSRAAAAMGDRLALAGLNAVTALLGFCLPEREAHRALYLETERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + +++ E+ LL +G+ L+L +C VTG DL++VSPKSG AV + Sbjct: 121 LLEEGELWPLAYLRWEVQLLHEMGYALELDQCAVTGQRDDLIYVSPKSGRAVSAQGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 AE++L LP L DA+ + AF T YFL ++ Sbjct: 181 AERLLPLPPILRGVGGGPDAE-IAQAFVTTGYFLTEH 216 >gi|84684348|ref|ZP_01012249.1| DNA repair protein RecO [Maritimibacter alkaliphilus HTCC2654] gi|84667327|gb|EAQ13796.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2654] Length = 246 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 88/230 (38%), Positives = 127/230 (55%), Gaps = 15/230 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L VR +GE ++I+EV T ++GRH G VR G S ++ PILQ G+ + + WR+ Sbjct: 4 MEWRDQGTLLSVRKHGETSVIIEVFTAEHGRHAGVVRGGVSRKIAPILQPGSQLDLVWRA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYD----MLN 115 RL +++G F E ++S A ++ L GL +I L F LPERE LY ML+ Sbjct: 64 RLEEHIGAFTVEPVKSRAAAIMGDRNALAGLNAITALLSFALPEREAHPRLYTRSIAMLD 123 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + P +G ++Q EL LL+ +G+GLDLT C VTG +DL +VSPKSG AV Sbjct: 124 LLAETPAWP--VG--YLQWELALLEELGYGLDLTACAVTGGAEDLAYVSPKSGRAVSAEG 179 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC 225 + +++L LP L T D + + T YFL H + H Sbjct: 180 AGEWVDRLLPLPEEL-LGVVTQDLAGIPDGLRTTGYFLT-----HGLAHA 223 >gi|68171672|ref|ZP_00545033.1| recO-related protein [Ehrlichia chaffeensis str. Sapulpa] gi|88658325|ref|YP_507349.1| DNA repair protein RecO [Ehrlichia chaffeensis str. Arkansas] gi|123493398|sp|Q2GGT4|RECO_EHRCR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67998907|gb|EAM85598.1| recO-related protein [Ehrlichia chaffeensis str. Sapulpa] gi|88599782|gb|ABD45251.1| putative DNA repair protein RecO [Ehrlichia chaffeensis str. Arkansas] Length = 244 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 131/226 (57%), Gaps = 12/226 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M WQD I++ +R YG+ II+ + T+++G G + + +HR LQ G+ V V W Sbjct: 1 MRWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLAKYSKKATHR----LQIGDYVNVTW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ-SIVPLFRFLPEREPCLELYDMLNIF 117 SRL NLG F++E+++S + +L + S V L + LPE E +Y+ L+IF Sbjct: 57 SSRLISNLGCFKYELIKSTLYHYIQDNLKTMCIAFSTVILDQVLPENEENYIIYNCLDIF 116 Query: 118 LNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 +N + + KI ++++EL LL +GFGLDL++C V ++L ++SPK+G AV ++VG Sbjct: 117 INSIQFQDINWKIKYLRLELTLLSELGFGLDLSRCAVNNTNENLTFISPKTGKAVSKTVG 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT----DYFLNKYAL 218 LPY++ +L LP L+ + K+ F+L+ YF K+ L Sbjct: 177 LPYSKSLLPLPQLLYDVYNNYEYKYSKTDFKLSLNVLGYFFKKHFL 222 >gi|84515166|ref|ZP_01002529.1| DNA repair protein RecO [Loktanella vestfoldensis SKA53] gi|84511325|gb|EAQ07779.1| DNA repair protein RecO [Loktanella vestfoldensis SKA53] Length = 243 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 2/214 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 + W+DDA IL +R +GE + I+EV + +GRH G VR G S ++ P++Q G V V W + Sbjct: 2 ISWRDDAAILAMRPFGESSAIIEVFSANHGRHAGVVRGGASRKIAPLIQPGAQVNVAWAA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLN 119 RL +LG F E + S A ++ L L GL ++ L LPERE LY L+ Sbjct: 62 RLDDHLGSFTVEPVRSRNAAAMADRLSLAGLNAVCALLLMVLPERESHPLLYQRSIALLD 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +V +++ E LL+ +GFGLDL+ C +GV +DL +VSPKSG AV R + Sbjct: 122 LLDQRAVWPLAYLRWEQALLEEMGFGLDLSACAASGVNEDLAFVSPKSGRAVSRDAAGVW 181 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL 213 A+++L LP L + + K A T +F+ Sbjct: 182 ADRLLPLPPVLAGKGDASGVEIAK-ALGTTGFFI 214 >gi|304321235|ref|YP_003854878.1| DNA repair protein RecO [Parvularcula bermudensis HTCC2503] gi|303300137|gb|ADM09736.1| DNA repair protein RecO [Parvularcula bermudensis HTCC2503] Length = 243 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 116/218 (53%), Gaps = 6/218 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W D ++ GE ++++ + TR G G V GQ R P+LQ GNLV +W SR Sbjct: 4 WTDRGFVIKTIPRGENHLVVTLFTRCRGAVTGLVHGGQGTRKAPLLQRGNLVSADWSSRQ 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNCH 121 A G +R E+ E+ A+ L S L L LQS+ L LPE L+D +F + Sbjct: 64 ADGYGTYRLELAEAIAARALDSRLSLLALQSVTDLLCEILPEGVAYEGLFDATEVFFSAL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT----QDLLWVSPKSGGAVCRSVGL 177 +++ + V+ EL LL +G+GL L +C TG T DL++VSPKSGGAV G Sbjct: 124 GEKAIMATLLVKWELGLLAALGYGLSLERCAATGRTLEDGADLVFVSPKSGGAVTAEAGA 183 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 PYA+++L LP FL + D + + +LT FL++ Sbjct: 184 PYADRLLPLPPFLIDRGEPTWPD-IAAGLRLTGTFLDE 220 >gi|114799258|ref|YP_759606.1| DNA repair protein RecO [Hyphomonas neptunium ATCC 15444] gi|122942647|sp|Q0C3T7|RECO_HYPNA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114739432|gb|ABI77557.1| DNA repair protein RecO [Hyphomonas neptunium ATCC 15444] Length = 243 Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 118/218 (54%), Gaps = 7/218 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG R +GE +IL+V+TR+ GR G V G S R + +AGN + ++W Sbjct: 1 MNWSDDGIVLGGRRFGEGGLILDVLTREKGRRSGLVYGGASRRKRAQFEAGNTIALSWTG 60 Query: 61 RLAQNLGEFRFEVLESH---CAKLLSSSLFLYGLQSIVPLFRF-LPEREPC-LELYDMLN 115 RL LG RF+V E+ ++LL L L +I L R L E + LY+ Sbjct: 61 RLDDQLG--RFDVAEARKDRASRLLDDPAALAALSAITSLLRGGLNEGDAAGSSLYEATT 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + L+ P+V ++V+ EL LL +GFGLDL +C V+G L VSP++G AV S Sbjct: 119 LLLDQLTEPNVWPALYVRWELGLLSALGFGLDLDECAVSGANDGLTHVSPRTGRAVRGSE 178 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL 213 PY +++ LPSFL + + + +LT YF+ Sbjct: 179 AEPYVDRLFALPSFLIDPRADVLPGDIAAGLRLTGYFI 216 >gi|126728495|ref|ZP_01744311.1| DNA repair protein RecO [Sagittula stellata E-37] gi|126711460|gb|EBA10510.1| DNA repair protein RecO [Sagittula stellata E-37] Length = 241 Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 118/215 (54%), Gaps = 2/215 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE ++IL+V T + GRH G +R G S +M P LQ G + ++WR+ Sbjct: 1 MEWRDTGILLATRRHGETSLILDVFTPERGRHSGVLRGGTSRKMAPHLQPGAQLDLSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E S A+ L L L GL ++V L RF LPER P +LY L+ Sbjct: 61 RLEDHMGAFTVEPQRSRAAQALGDRLALAGLNAVVALLRFCLPERVPHPDLYTFSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + +++ E+ LL+ +GF LDL+ C VTG T+ L++VSPKSG AV + Sbjct: 121 LLDQPDLWPLAYLRWEMALLEEMGFALDLSCCAVTGRTEGLVYVSPKSGRAVTAEGAGNW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 +L LP + D + +A T YFL Sbjct: 181 VHHLLPLPEVMLG-RGAADNPEVATALGTTGYFLE 214 >gi|110678689|ref|YP_681696.1| DNA repair protein RecO [Roseobacter denitrificans OCh 114] gi|119361483|sp|Q16AI3|RECO_ROSDO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|109454805|gb|ABG31010.1| DNA repair protein RecO [Roseobacter denitrificans OCh 114] Length = 241 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 117/217 (53%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWREEGILLSTRRHGESAAIIEVFTPSHGRHAGVVRGGTSRKIAPILQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGSFLVEPVRSRAAAAMGDRLALAGLNAVTALLGFCLPEREAHRPLYVETERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL ++G+ L L C VTG DL++VSPKSG AV + Sbjct: 121 LLGEGEIWPLAYLRWEVQLLHDMGYALALEACAVTGQRDDLIYVSPKSGRAVSAKGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+++L LP L DA+ + AF T YFL ++ Sbjct: 181 ADRLLPLPPILRGIGGGPDAE-IAQAFITTGYFLTEH 216 >gi|288958668|ref|YP_003449009.1| DNA repair protein RecO [Azospirillum sp. B510] gi|288910976|dbj|BAI72465.1| DNA repair protein RecO [Azospirillum sp. B510] Length = 240 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 120/234 (51%), Gaps = 4/234 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D I+L R GE + + ++TR +GRH G V G+S R + L+ G LV WR Sbjct: 1 MDWSDQGIVLSARPQGEGSAVATLLTRGHGRHAGMVMGGRSARQRGTLEPGTLVHARWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL ++LG F E + + A + L L S L LPERE L+D L + Sbjct: 61 RLPEHLGHFTLEPVRGYAAGFFDDAQALAALTSACALVEAALPEREAHPALFDGLLVLFG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P+ + +V+ E+ LL +GFGLDL +C V+G L +VSP++G AV SVG PY Sbjct: 121 LLDSPA-WAETYVRWEVGLLAELGFGLDLDRCAVSGANDYLAYVSPRTGRAVTASVGEPY 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC-HLLRENF 232 +++L LP FL ++ +LT +FL ++ L + LRE + Sbjct: 180 RDRLLPLPDFL-AGRGGGGPAAVADGLRLTAHFLERHLLNGPLPPARERLRERY 232 >gi|294084098|ref|YP_003550856.1| DNA repair protein RecO [Candidatus Puniceispirillum marinum IMCC1322] gi|292663671|gb|ADE38772.1| DNA repair protein RecO [Candidatus Puniceispirillum marinum IMCC1322] Length = 250 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 119/219 (54%), Gaps = 10/219 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W DA+I+ + +GE + ++ V+T + GRH G VR G S +M+ ILQ GN VRV+WR+RL Sbjct: 4 WVADAVIISAKPHGEGSAVVIVLTAENGRHAGLVRGGSSSKMRGILQPGNRVRVSWRARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN-- 119 LG+ + E++ + A +L +L L G+ S L LPERE LYD N + Sbjct: 64 IDQLGQMQIELINAIPALMLDDALRLAGIASACALLDGTLPEREAQHALYDGTNALFDLM 123 Query: 120 CHKIPS---VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 C P + G +++ EL LL G+ LDLT+C +G + L +VSPKSG A+ Sbjct: 124 CLDDPDHRWIEG--YIRWELGLLNAAGYQLDLTRCAASGAREKLAYVSPKSGCAIALDQA 181 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 Y ++ML LP FL A S LT +FL K Sbjct: 182 GEYVQRMLTLPVFLGGITNV--ASDHVSGLNLTGHFLEK 218 >gi|254450984|ref|ZP_05064421.1| DNA repair protein RecO [Octadecabacter antarcticus 238] gi|198265390|gb|EDY89660.1| DNA repair protein RecO [Octadecabacter antarcticus 238] Length = 242 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 119/215 (55%), Gaps = 2/215 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W+D+ ++ VR +GE + I+EV T G G VR G S ++ P LQ G + V W++RL Sbjct: 4 WRDEGALIRVRKHGESSAIIEVFTPSRGLTAGIVRGGTSRKIAPTLQPGAQLDVTWKARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 +LG F E + S A+++ L L GL ++ L F LP+RE +LY L+ Sbjct: 64 EDHLGSFTVEPIRSRTAQVMQDRLALAGLNAVTGLLSFLLPDREAHAQLYARTIQLLDLL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 V ++Q E+ LL +GFG+DL+ C V+G+ DL +VSP++G AV R +A+ Sbjct: 124 GQNDVWPLAYLQWEIALLDEMGFGMDLSACAVSGLNDDLFYVSPRTGRAVSRLAAGEWAD 183 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 ++L LP L + D + + A + T +FLN + Sbjct: 184 RLLPLPHVLLGKGDA-DLNEIVLALRTTGHFLNNH 217 >gi|84500557|ref|ZP_00998806.1| DNA repair protein RecO [Oceanicola batsensis HTCC2597] gi|84391510|gb|EAQ03842.1| DNA repair protein RecO [Oceanicola batsensis HTCC2597] Length = 241 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 126/217 (58%), Gaps = 2/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE I +V T GRH G VR S ++ P+LQ G + ++W++ Sbjct: 1 MEWRDQGILLAVRRHGESAAIADVFTPGRGRHAGVVRGATSRKLAPVLQPGAQLDISWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG F E + S A++L L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEEHLGHFTVEPVRSRAAQILGDRLALAGLNAVTALLCFALPEREAHEALYRRTETLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ EL LL+++G+GLDLT+C VTG + L ++SP++G AV + + Sbjct: 121 LLGQMDLWPLAYLHWELALLEDLGYGLDLTECAVTGAREGLDYISPRTGRAVTAAGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+++L LP L ++ + D + L S F++T +FL ++ Sbjct: 181 ADRLLPLPPCLLRQGEAPDEEIL-SGFRVTGHFLAEH 216 >gi|89053018|ref|YP_508469.1| DNA repair protein RecO [Jannaschia sp. CCS1] gi|119361461|sp|Q28V18|RECO_JANSC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|88862567|gb|ABD53444.1| DNA repair protein RecO [Jannaschia sp. CCS1] Length = 244 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 121/217 (55%), Gaps = 4/217 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ D I+L VR +GE + I+E+ T G HLG VR G S +M P+LQ G + WR+ Sbjct: 1 MDWRADGILLAVRRHGEASAIIELFTADQGCHLGVVRGGASRKMAPLLQVGAQLDATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL+ ++G + E+++ A+++ + L GL S+ L F LPER L+ L+ Sbjct: 61 RLSDHIGSYTVELVKGRAAEVMEDRVALAGLSSVCALLSFSLPERAAYPGLFARTLAVLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ E+ LL +GFGLDL++C TGVTQDL ++SP++G AV R+ + Sbjct: 121 GLGAER-WAEAYLGWEMALLTEMGFGLDLSQCAATGVTQDLAFISPRTGRAVSRAAAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+++L L L E + + + +T +FL + Sbjct: 180 ADRLLPLSPAL--EGMARGPEDILAGLAVTGHFLATH 214 >gi|296116242|ref|ZP_06834859.1| putative DNA repair protein recO [Gluconacetobacter hansenii ATCC 23769] gi|295977176|gb|EFG83937.1| putative DNA repair protein recO [Gluconacetobacter hansenii ATCC 23769] Length = 265 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 135/247 (54%), Gaps = 9/247 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE ++I V+T ++G + G VR G + + +P+ QAGNL+ W + Sbjct: 7 MEWEAPALVLSAVPYGESSMIAHVLTGEHGLYHGMVRGGGARQGRPVWQAGNLITARWNA 66 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLN---- 115 RL + LG R E++ + A++L + L L S+ L LPEREP L +++ L Sbjct: 67 RLPEQLGSLRGELVHASAARVLEYAHPLAMLASLCALADSSLPEREPHLAVFEELTRLLA 126 Query: 116 -IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 I L + ++ E++LL ++GFGLDL+ C V+G DL WVSP+SG AV Sbjct: 127 RISLEPAEAERSGMAALIRWEMLLLSDLGFGLDLSCCAVSGQADDLAWVSPRSGRAVSDG 186 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL--QHNIIHCHLLR-EN 231 + +++L+LP FL Q + + +LT +FL + A +H + +R + Sbjct: 187 HAGQWRDRLLMLPPFLLDPTQDGTPEQWLAGLRLTGHFLARDAFGQRHRPLPAARIRLLD 246 Query: 232 FLGKLLE 238 +G+++E Sbjct: 247 MVGRMVE 253 >gi|254436668|ref|ZP_05050162.1| DNA repair protein RecO [Octadecabacter antarcticus 307] gi|198252114|gb|EDY76428.1| DNA repair protein RecO [Octadecabacter antarcticus 307] Length = 242 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 2/215 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W+D+ ++ VR +GE + I+EV T G G VR G S ++ P LQ G + V W++RL Sbjct: 4 WRDEGALVRVRKHGESSAIIEVFTASRGLTAGIVRGGTSRKIAPTLQPGAQLDVTWKARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 +LG F E + S A+++ L L GL ++ L F LP+RE LY L+ Sbjct: 64 EDHLGSFTVEPIRSRTAQVMQDRLALAGLNAVTGLLSFLLPDREAHAPLYARTIQLLDLL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 V ++Q E+ LL +GFG+DL+ C V+G+ DL +VSP++G AV R +A+ Sbjct: 124 GQNDVWPLAYLQWEVALLDEMGFGMDLSACAVSGLNDDLFYVSPRTGRAVSRLAAGEWAD 183 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 ++L LP L + D + + A + T +FLN + Sbjct: 184 RLLPLPHVLLGKGDA-DLNEIVLALRTTGHFLNNH 217 >gi|86135730|ref|ZP_01054309.1| DNA repair protein RecO [Roseobacter sp. MED193] gi|85826604|gb|EAQ46800.1| DNA repair protein RecO [Roseobacter sp. MED193] Length = 244 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 118/216 (54%), Gaps = 2/216 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I++V T +GRH G V G S + P+LQ G + + WR+ Sbjct: 1 MEWRDHGILLTRRRHGEGAAIIDVFTEHHGRHAGIVHGGASRKKAPVLQPGAQLDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG ++ E L S A LS L L GL ++ L F LPER +LY L+ Sbjct: 61 RLQEHLGSYQAEPLRSRAAAALSGRLALAGLNAVTGLLGFCLPERAAYPDLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + +++ E+ LL +GFGLDL+ C V+G +DL ++SPK+G AV R + Sbjct: 121 LLEQEEIWPLAYLRWEMALLAAMGFGLDLSACAVSGSNEDLAYISPKTGRAVSRQEAGQW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 ++L LP L + D + + + T +FL++ Sbjct: 181 VNRLLPLPPVLRGLGEAPDHE-VAEGLRTTGFFLSE 215 >gi|260576291|ref|ZP_05844283.1| DNA repair protein RecO [Rhodobacter sp. SW2] gi|259021559|gb|EEW24863.1| DNA repair protein RecO [Rhodobacter sp. SW2] Length = 238 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 92/241 (38%), Positives = 130/241 (53%), Gaps = 6/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L VR +GE I+EV T +GRH G VR G S R+ P+LQ G + V WR+ Sbjct: 1 MEWRDQGALLSVRPHGESAAIIEVFTAAHGRHAGVVRGGASRRIAPLLQPGAQLDVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A +L L L GL +I + R LPER P LY L+ Sbjct: 61 RLEGHIGAFTVEPVRSR-AGVLGDRLALAGLNAICAMVRVALPERAPHDLLYAATIAVLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL+LL+ +GFGLDL +C VTG DL +VSPK+G AV R + Sbjct: 120 ALETAPDWPARYLRWELLLLEELGFGLDLGRCAVTGSRDDLAYVSPKTGRAVSRDGAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 A ++L LP L + AD L + +T +FL + ++ H L E +LLEL Sbjct: 180 AARLLPLPDCLLGQGPASGAD-LAAGLAVTGHFLTRE--MASLRHVQHLPEAR-ARLLEL 235 Query: 240 I 240 + Sbjct: 236 L 236 >gi|329850744|ref|ZP_08265589.1| DNA repair protein RecO [Asticcacaulis biprosthecum C19] gi|328841059|gb|EGF90630.1| DNA repair protein RecO [Asticcacaulis biprosthecum C19] Length = 244 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 117/221 (52%), Gaps = 3/221 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++D+AI+L + +GE IL V+T +G + V G S RM+ LQ G V +R+R Sbjct: 4 FEDEAIVLSAKLHGESGAILHVLTENHGVYAAHVAGGASRRMKAALQPGASVLFRFRARH 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNCH 121 ++ LG E S +L S+ L GLQ + R LPERE Y L+ L Sbjct: 64 SEQLGTASVEASGS-GPDVLDDSVALLGLQCACLMTRQVLPERERHPGAYYALSALLGAF 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 P + I+V+ E LL+ +G+GLDL+ C VTG DL++VSPKS AV R G Y + Sbjct: 123 VAPDIWPAIYVRYEAGLLEELGYGLDLSACAVTGSRDDLVYVSPKSARAVSRGAGEAYRD 182 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQ-HN 221 K+LVLP FL + + A + LT +FL ++ HN Sbjct: 183 KLLVLPQFLLSSQGGLIAGDVGRGLALTGFFLERHVFHPHN 223 >gi|146278602|ref|YP_001168761.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17025] gi|172046019|sp|A4WVP2|RECO_RHOS5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145556843|gb|ABP71456.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17025] Length = 237 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 118/216 (54%), Gaps = 4/216 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 + W+D+ +L VR +GE I+EV T +GRHLG VR G S R P+LQ G + + W++ Sbjct: 2 LEWRDEGALLSVRRHGESAAIIEVFTASHGRHLGVVRGGASRRHAPVLQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL ++G F E L + + L L GL +I + LPEREP + L+ ++ Sbjct: 62 RLDDHMGAFTVEPLRARTG-IFGDRLALAGLNAICAMLHVVLPEREPHVGLWRESIELMD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSP++G AV R+ + Sbjct: 121 ALAAPGWP-AAYLRWEMRLLEEAGFGLDLTRCAVTGSREDLAFVSPRTGRAVGRAAAGDW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 A+++ LP L + ++ +T +FL + Sbjct: 180 ADRLFPLPLALLG-QGPASGPEVRQGLAITGHFLAR 214 >gi|114765537|ref|ZP_01444645.1| DNA repair protein RecO [Pelagibaca bermudensis HTCC2601] gi|114542130|gb|EAU45162.1| DNA repair protein RecO [Roseovarius sp. HTCC2601] Length = 242 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 2/216 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + ILEV T ++GRH+G +R G S ++ P LQ G + + WR+ Sbjct: 1 MDWRDTGILLSTRRHGETSAILEVFTAEHGRHMGVLRGGTSRKIAPSLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G + E S A +S L L GL ++V L F LPERE LY L+ Sbjct: 61 RLEDHMGAWTVEPQRSRAASAMSDRLSLAGLNAVVALLSFCLPEREAHPALYARTESLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL +GFGLDL+ C VTG + L +VSP++G AV + Sbjct: 121 LLAERELWPLAYMRWEMALLDEMGFGLDLSACAVTGTNEPLDYVSPRTGRAVSAFGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 ++L LP + D + L A + T +FL Sbjct: 181 VARLLPLPPVMLGRGSAPDGEILD-ALRTTGHFLEN 215 >gi|294678824|ref|YP_003579439.1| DNA repair protein RecO [Rhodobacter capsulatus SB 1003] gi|294477644|gb|ADE87032.1| DNA repair protein RecO [Rhodobacter capsulatus SB 1003] Length = 240 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 123/229 (53%), Gaps = 16/229 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD IL R +GE + I+EV T +GRHLG VR G S +M +L G+ V V WR+ Sbjct: 1 MDWQDSGTILSTRLHGESSAIVEVFTATHGRHLGVVRGGASRKMAAVLMPGSHVAVAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL LG F E L S A LS L L GL ++ L F L ER P LY Sbjct: 61 RLEDQLGSFTVEPLASR-AGALSDRLALMGLNAVCALLSFVLAERAPHPRLYAATEPLF- 118 Query: 120 CHKIPSVIGKI-------FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 +VIG+ ++ E+ LL+++GFGLDL++C VTG DL +VSP++G AV Sbjct: 119 -----TVIGQAAEGWVVDYLIWEMALLEDLGFGLDLSRCAVTGTRDDLAFVSPRTGRAVS 173 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 R+ +A K+L LP L + + + LT +FL ++A +H+ Sbjct: 174 RAGAGDWAPKLLPLPLCLLGQGPATWTE-IGQGLTLTGHFLTRFASEHS 221 >gi|159042759|ref|YP_001531553.1| DNA repair protein RecO [Dinoroseobacter shibae DFL 12] gi|254790521|sp|A8LLE2|RECO_DINSH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157910519|gb|ABV91952.1| DNA repair protein RecO [Dinoroseobacter shibae DFL 12] Length = 241 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 1/189 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W+++ ++L VR +GE ++I+E TR +GRHLG VR G S ++ P+LQ G + + W++RL Sbjct: 4 WREEGVLLSVRPHGETSVIVEAFTRAHGRHLGVVRGGVSRKLAPVLQPGAQLDLRWKARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 ++G F E + A +L L L + S + L RF L ER YD L+ Sbjct: 64 EDHMGAFTVEPVRGRAAAVLGDRLALSAMSSALALARFSLAERAAYPGFYDQTVALLDAL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + ++ E+ LL +GFGLDL+ C V GV +DL +VSP++G AV R + + Sbjct: 124 AEGTGWLPAYLDWEMALLDQMGFGLDLSGCAVRGVNEDLAFVSPRTGRAVSRQAAGAWVD 183 Query: 182 KMLVLPSFL 190 ++L LP + Sbjct: 184 RLLPLPEVM 192 >gi|221234572|ref|YP_002517008.1| DNA repair protein RecO [Caulobacter crescentus NA1000] gi|254790515|sp|B8GVD0|RECO_CAUCN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|220963744|gb|ACL95100.1| DNA repair protein recO [Caulobacter crescentus NA1000] Length = 243 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L RS+GE I+E++T G+ V S RM+P LQ G V V +R+ Sbjct: 1 MEWEDEAYVLSARSHGETGAIVELLTEARGKVAAHVAGAASRRMKPFLQPGARVIVRYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG E + + L + LPERE + L + Sbjct: 61 KVEGQLGSATLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +IP + ++V+ E LL+ +GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 121 VLEIPEIWPAVYVRYEAGLLQELGFGLDLSKCAATGAFDDLVYVSPRTGRAVSREAGKPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +K+L LP F+ + + +K+ +T +FL ++ Sbjct: 181 HDKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQF 217 >gi|295690015|ref|YP_003593708.1| DNA repair protein RecO [Caulobacter segnis ATCC 21756] gi|295431918|gb|ADG11090.1| DNA repair protein RecO [Caulobacter segnis ATCC 21756] Length = 243 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L RS+GE I+E++T+ G+ V S RM+P LQ G V +R+ Sbjct: 1 MEWEDEAYVLSARSHGETGAIVELLTQDRGKFAAHVAGAASRRMKPFLQPGARVIARYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R++ LG E + + L + LPERE + L + Sbjct: 61 RMSDQLGSASLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ + ++V+ E LL+ +GFGLDL++C TGV DL++VSP++G AV R G PY Sbjct: 121 VLEVSEIWPAVYVRYEAGLLQELGFGLDLSRCAATGVFDDLVYVSPRTGRAVSREAGRPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +K+L LP F+ + + +K+ +T +FL ++ Sbjct: 181 HDKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQF 217 >gi|157803626|ref|YP_001492175.1| DNA repair protein RecO [Rickettsia canadensis str. McKiel] gi|254790734|sp|A8EYF7|RECO_RICCK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157784889|gb|ABV73390.1| DNA repair protein RecO [Rickettsia canadensis str. McKiel] Length = 241 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 7/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ YG + G V+ S + + I Q GN+V W + Sbjct: 1 MNIKDIGVIVAKKPLKENTFIITVFTKNYGLYSGVVK-ASSKKSKFIYQEGNIVDFLWMA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDML-NIFL 118 RL +++G + E+++S+ +++ LY SI+ L + L ERE + L N Sbjct: 60 RLHEHIGIAKCELIKSYTGYFITNKTKLYAFNSIISLIKELLHEREEYSNFFSFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + ++ EL LL G+ LDL+KC V+ V QDL +VSPKSG A+ VG P Sbjct: 120 NLSK--KFFFRDYINFELALLDIAGYKLDLSKCAVSNVKQDLYYVSPKSGRALSYEVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 Y +K+L+LP FL + I + + A LT+YF N+Y L HN H R+ F+ +L Sbjct: 178 YKDKLLILPKFLLSDNSKITLEEKRQALTLTNYFFNRY-LFHNNRHAE-ARQAFMEYIL 234 >gi|148557387|ref|YP_001264969.1| DNA repair protein RecO [Sphingomonas wittichii RW1] gi|254790737|sp|A5VEW5|RECO_SPHWW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148502577|gb|ABQ70831.1| DNA repair protein RecO [Sphingomonas wittichii RW1] Length = 243 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 7/214 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 AII +R++GE I+ +T +G G+VR G+S R++P+L AGNLV +R+R A+ L Sbjct: 7 AIICAMRAHGEHGAIVRALTPDHGLLAGYVRGGRSRRLRPVLVAGNLVEAEFRARTAEQL 66 Query: 67 GEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC-HKI 123 E+ S L + L S+ L E +P LY+ L+ L Sbjct: 67 PGLTVELSHSRAGLLAEPLAAAAIDWLSSLTAAS--LAEGQPHARLYEALDAVLAAIEYA 124 Query: 124 PSVIG--KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 PS G V+ ELML+ ++G+ LDL+ C TG DL +VSPKSGGAV R+ G PYA Sbjct: 125 PSARGWAAAAVRYELMLMADLGYALDLSACAATGARDDLAYVSPKSGGAVSRAAGEPYAA 184 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 ++L LP+FL D + +LT +FL + Sbjct: 185 RLLPLPAFLVDPSADSDWSDIVDGMRLTGHFLAR 218 >gi|83593184|ref|YP_426936.1| DNA repair protein RecO [Rhodospirillum rubrum ATCC 11170] gi|119361481|sp|Q2RT96|RECO_RHORT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83576098|gb|ABC22649.1| Recombination protein O, RecO [Rhodospirillum rubrum ATCC 11170] Length = 252 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 124/241 (51%), Gaps = 7/241 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W D I+L R +GE +I+ +++ +GRH G VR G+ R++ LQ G+LV+ W++RL Sbjct: 4 WSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWKARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFL--- 118 +LG E+L LL L L + L LPER P ++YD L Sbjct: 64 EDHLGSLVVELLAGVAGGLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALLDAL 123 Query: 119 --NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 P V FV+ E+ LL +GFGLDL+ C V+G DL +VSP+SG AV R G Sbjct: 124 AEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAVSGECGDLAYVSPRSGRAVGREAG 183 Query: 177 LPYAEKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 P+ ++L LP+FL E +A ++ +L+ YFL + L R+ F+ + Sbjct: 184 APWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRFVER 243 Query: 236 L 236 L Sbjct: 244 L 244 >gi|330994746|ref|ZP_08318668.1| DNA repair protein recO [Gluconacetobacter sp. SXCC-1] gi|329758007|gb|EGG74529.1| DNA repair protein recO [Gluconacetobacter sp. SXCC-1] Length = 263 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 121/246 (49%), Gaps = 10/246 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ V+T +YG + G R G + R + Q GNLVR W + Sbjct: 1 MEWEAPALVLSATPYGEGSAIVHVLTGEYGLYHGLARGGSASRGRATWQTGNLVRARWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLN---- 115 RL + LG E + + A+LL L L L S+ L LPEREP ++ L Sbjct: 61 RLPEQLGSITAETVHASAARLLDYPLPLAMLASLCALADDCLPEREPHPAIFQGLTSLLA 120 Query: 116 -IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 I L+ + V+ ELMLL ++GFGLDL C + G +DL WVSP++G AV Sbjct: 121 RISLDPQWAETEAMPEIVRWELMLLSDLGFGLDLGGCALGGSREDLRWVSPRTGRAVSDE 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + +++L LP F+ +Q +L+ +FL + A H G Sbjct: 181 KAGAWRDRLLPLPGFILHPQQVATPRDWHDGLRLSGHFLRRDAFGQR----HRPVPEARG 236 Query: 235 KLLELI 240 +L ++I Sbjct: 237 RLADMI 242 >gi|16125811|ref|NP_420375.1| DNA repair protein RecO [Caulobacter crescentus CB15] gi|20139676|sp|Q9A802|RECO_CAUCR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13422953|gb|AAK23543.1| conserved hypothetical protein [Caulobacter crescentus CB15] Length = 250 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 112/217 (51%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 + W+D+A +L RS+GE I+E++T G+ V S RM+P LQ G V V +R+ Sbjct: 8 LEWEDEAYVLSARSHGETGAIVELLTEARGKVAAHVAGAASRRMKPFLQPGARVIVRYRA 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG E + + L + LPERE + L + Sbjct: 68 KVEGQLGSATLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIR 127 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +IP + ++V+ E LL+ +GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 128 VLEIPEIWPAVYVRYEAGLLQELGFGLDLSKCAATGAFDDLVYVSPRTGRAVSREAGKPY 187 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +K+L LP F+ + + +K+ +T +FL ++ Sbjct: 188 HDKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQF 224 >gi|310815097|ref|YP_003963061.1| DNA repair protein RecO [Ketogulonicigenium vulgare Y25] gi|308753832|gb|ADO41761.1| DNA repair protein RecO [Ketogulonicigenium vulgare Y25] Length = 241 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 5/215 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 WQD+ I+L +GE +I +V T++ G+ G VR G RMQP+L GN + + WR+RL Sbjct: 4 WQDEGILLTTHRHGEAGVIAQVFTQERGKISGLVRGGAGSRMQPVLIPGNQLSLRWRARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +LG + E++ S L+ L G L +PER P Y L+ Sbjct: 64 DDHLGSLQPELIRSRAGFLMQDRLSLAAGAAVTALLAATMPERVPHTAFYAQSTALLDLV 123 Query: 122 KIP---SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + S+ ++Q E++LL+ GFGLDLT C VTG DL +VSPKSG AV +S Sbjct: 124 GVEDWQSLWPLAYLQWEMVLLREGGFGLDLTTCAVTGAADDLCYVSPKSGRAVSKSGAGA 183 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL 213 +AE++L LP+ + + E D + A T++FL Sbjct: 184 WAERLLPLPAVM-RGEGDADTSDILQALATTEWFL 217 >gi|239947680|ref|ZP_04699433.1| DNA repair protein RecO [Rickettsia endosymbiont of Ixodes scapularis] gi|239921956|gb|EER21980.1| DNA repair protein RecO [Rickettsia endosymbiont of Ixodes scapularis] Length = 234 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 121/223 (54%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKES-SKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDML-NIFL 118 RL +++G + E+++S+ + + LY S++ L + L ERE + L N Sbjct: 60 RLHEHIGMAKCELIKSYTGYFIINKAKLYAFNSVISLIKELFHEREEHSNFFSFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ LDLTKC V+ VT DL +VSPKSG A+ VG P Sbjct: 120 NLSK--NFCFRDYINFELALLAETGYKLDLTKCDVSHVTTDLTYVSPKSGRALSYKVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL E I + K A LT+YF N+Y +N Sbjct: 178 YKDKLLILPRFLLSENSEITLEEKKQAITLTNYFFNRYLFHNN 220 >gi|157825871|ref|YP_001493591.1| DNA repair protein RecO [Rickettsia akari str. Hartford] gi|254764658|sp|A8GNV8|RECO_RICAH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157799829|gb|ABV75083.1| DNA repair protein RecO [Rickettsia akari str. Hartford] Length = 237 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 82/239 (34%), Positives = 130/239 (54%), Gaps = 7/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDVGVIISKKPLKENTFIITVCTKNHGLYSGVVKES-SKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYD-MLNIFL 118 RL +++G + E+++S+ L+ + LY SI+ L + L ERE + +LN Sbjct: 60 RLHEHIGIAKCELIKSYTGYLIINKTKLYAFNSIISLIKELCHEREKHSNFFSFLLNYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ LDLTKC VT VT DL +VSPKS A+ VG P Sbjct: 120 NLSK--NFCFRDYINFELTLLAKTGYKLDLTKCGVTHVTTDLTYVSPKSARALSYEVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 Y +K+L+LP FL ++ I + + A LT+YF N+Y +N R+ F+G +L Sbjct: 178 YKDKLLILPKFLLSDDSEITLEEKRQALTLTNYFFNRYLFHNN--RQPEARQTFVGYIL 234 >gi|167645704|ref|YP_001683367.1| DNA repair protein RecO [Caulobacter sp. K31] gi|189039651|sp|B0T3I3|RECO_CAUSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167348134|gb|ABZ70869.1| DNA repair protein RecO [Caulobacter sp. K31] Length = 243 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 121/217 (55%), Gaps = 1/217 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L R +GE I+E++T++ G+ + V S RM+P LQAG V +R+ Sbjct: 1 MEWEDEAFVLSARVHGETGAIVELLTQERGKFVAHVSGAASRRMKPFLQAGAKVIARYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 R++ +G E + + L L L GL + + PERE + L + Sbjct: 61 RMSDQMGAATLEPMGEGPSSLFDEPLALSGLSAAASVAAGALPEREAHPGAFHALEALIA 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 IP++ ++V+ E LL+++GFGLDL+KC TG DL++VSP++G AV R+ G PY Sbjct: 121 ALAIPAIWPAVYVRFEAGLLQDLGFGLDLSKCAATGSLDDLVYVSPRTGRAVSRAAGQPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +K+L LP F+ + + +K+ +T +FL ++ Sbjct: 181 HDKLLPLPPFMLSAQGGLVEGDVKAGLDITGHFLEQF 217 >gi|148284965|ref|YP_001249055.1| DNA repair protein RecO [Orientia tsutsugamushi str. Boryong] gi|254764648|sp|A5CF17|RECO_ORITB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146740404|emb|CAM80867.1| DNA repair protein [Orientia tsutsugamushi str. Boryong] Length = 241 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 125/220 (56%), Gaps = 2/220 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++D AIIL R+ E I+ V+T+ YG + G +++ S + I Q GN+V W + Sbjct: 1 MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 RL ++LG E+++S+ ++S+ L+ S++ L ERE L++ L Sbjct: 61 RLDKHLGTINCELVKSYSYLIMSNKRNLFYTHSLIELTLMSFKERELHANLFEKWLGNLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ K ++ EL++LK G+ L L +C VT TQ+L++VSPKSG A+ +VG PY Sbjct: 121 SINVGNINIKNYINFELLILKEAGYQLTLDRCGVTNCTQNLIYVSPKSGQAISAAVGEPY 180 Query: 180 AEKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYAL 218 K+L+LP FL + D +++AF LT YF NKY L Sbjct: 181 KHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYVL 220 >gi|229586870|ref|YP_002845371.1| DNA repair protein RecO [Rickettsia africae ESF-5] gi|259563683|sp|C3PNW8|RECO_RICAE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|228021920|gb|ACP53628.1| DNA repair protein RecO [Rickettsia africae ESF-5] Length = 237 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 124/223 (55%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ ++ E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKTLKENTFIITVFTKNHGLYSGVVKEF-SKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDML-NIFL 118 RL +++G + E+++S+ +++ LY S++ L + ERE + + L N Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ +VG P Sbjct: 120 NLSK--NFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYAVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL + I + + A LT+YF N+Y +N Sbjct: 178 YKDKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNN 220 >gi|119385562|ref|YP_916617.1| DNA repair protein RecO [Paracoccus denitrificans PD1222] gi|254764650|sp|A1B5X7|RECO_PARDP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119376157|gb|ABL70921.1| DNA repair protein RecO [Paracoccus denitrificans PD1222] Length = 242 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 6/215 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W +A ++ ++ +GE +IL V++R+ G G V G S + +LQ GN V + WR+ Sbjct: 1 MEWSGEASVMALQRHGESAVILTVLSRETGLIRGLVPGGASAKRAAMLQPGNRVSLRWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL + LG F E + LL S L G+ ++ L F LPER+P L D L+ Sbjct: 61 RLEEQLGTFAVEPARARPG-LLGSGDALAGVNAVTALLTFALPERDPHPRLADATEALLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ E+ LL +GFGLDLT C VTG + L +VSP+SG AV + Sbjct: 120 LMDAGEGWAEAYLHWEMRLLDELGFGLDLTSCAVTGAREGLAYVSPRSGRAVSAQAAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 A ++L LP+ L ++ A LT +FL Sbjct: 180 APRLLPLPAMLGGRGN----GGIEDALALTGHFLQ 210 >gi|67459260|ref|YP_246884.1| DNA repair protein RecO [Rickettsia felis URRWXCal2] gi|75536308|sp|Q4UL54|RECO_RICFE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67004793|gb|AAY61719.1| DNA repair protein RecO [Rickettsia felis URRWXCal2] Length = 237 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 121/223 (54%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDVGVIIAKKPLKENTFIITVFTKNHGLYSGVVKES-SKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDML-NIFL 118 RL +++G + E+++S+ + + LY S++ L + L ERE + L N Sbjct: 60 RLHEHIGMAKCELIKSYTGYFIINKAKLYAFNSVISLIKELFHEREEHSNFFSFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ LDLTKC VT VT DL +VSPKS A+ VG P Sbjct: 120 NLSK--NFCFRDYINFELALLAETGYKLDLTKCGVTHVTTDLNYVSPKSARALSYEVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL ++ I + + A LT+YF N+Y +N Sbjct: 178 YKDKLLILPKFLLSDDSEITLEEKRQASTLTNYFFNRYLFHNN 220 >gi|189184083|ref|YP_001937868.1| DNA repair protein RecO [Orientia tsutsugamushi str. Ikeda] gi|254764649|sp|B3CTD7|RECO_ORITI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189180854|dbj|BAG40634.1| DNA repair protein RecO [Orientia tsutsugamushi str. Ikeda] Length = 241 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 2/220 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++D AIIL R+ E I+ V+T+ YG + G +++ S + I Q GN+V W + Sbjct: 1 MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 RL ++LG E+++S+ ++S+ L S++ L ERE L++ L Sbjct: 61 RLDEHLGTINCELVKSYSYLIMSNKRNLLYTHSLIELTLMSFKERELHANLFEKWLENLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ K ++ EL++LK G+ L+L +C VT TQ+L++VSPKSG A+ +VG PY Sbjct: 121 SINTGNINVKNYINFELLILKEAGYRLNLDRCGVTNCTQNLIYVSPKSGQAISATVGEPY 180 Query: 180 AEKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYAL 218 K+L+LP FL + D +++AF LT YF NKY L Sbjct: 181 KHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYIL 220 >gi|15892735|ref|NP_360449.1| DNA repair protein RecO [Rickettsia conorii str. Malish 7] gi|34581542|ref|ZP_00143022.1| hypothetical protein [Rickettsia sibirica 246] gi|81595557|sp|Q92HF9|RECO_RICCN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|15619911|gb|AAL03350.1| unknown [Rickettsia conorii str. Malish 7] gi|28262927|gb|EAA26431.1| unknown [Rickettsia sibirica 246] Length = 237 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 122/223 (54%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKEF-SKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDML-NIFL 118 RL +++G + E+++S+ +++ LY S++ L + ERE + + L N Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG P Sbjct: 120 NLSK--NFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL + I + + A LT+YF N+Y +N Sbjct: 178 YKDKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNN 220 >gi|329890071|ref|ZP_08268414.1| recombinational DNA repair protein RecF pathway [Brevundimonas diminuta ATCC 11568] gi|328845372|gb|EGF94936.1| recombinational DNA repair protein RecF pathway [Brevundimonas diminuta ATCC 11568] Length = 200 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 1/174 (0%) Query: 44 MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LP 102 M+P LQ G V + RSR + LG R E + A L L L GL + + + LP Sbjct: 1 MRPFLQPGARVVADLRSRTSDQLGSARLEPVGEGPAALFDDPLALTGLSAAAAVAQGALP 60 Query: 103 EREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW 162 EREP + + +P V IFV+ E LL+++GFGLDL++C TG DL+W Sbjct: 61 EREPHPGAFYAFEALMGAFAVPEVWPAIFVRFEAGLLEDLGFGLDLSRCASTGSMDDLVW 120 Query: 163 VSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 VSP++G AV R G PYA+K+L LP F+ + + +K+ +LT +FL ++ Sbjct: 121 VSPRTGRAVSREAGAPYADKLLALPPFMLGAQAGLGEGDVKAGLELTGHFLEQF 174 >gi|269958745|ref|YP_003328532.1| DNA repair protein RecO [Anaplasma centrale str. Israel] gi|269848574|gb|ACZ49218.1| DNA repair protein RecO [Anaplasma centrale str. Israel] Length = 238 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 123/227 (54%), Gaps = 10/227 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTRFTKK---RP-LQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 +L NLG F +EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTYEVITSAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGCAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHN 221 +K+L LP L E + AD + ++ +FL+++ LQ + Sbjct: 177 RDKLLPLPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQES 223 >gi|157828681|ref|YP_001494923.1| DNA repair protein RecO [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933400|ref|YP_001650189.1| DNA repair protein RecO [Rickettsia rickettsii str. Iowa] gi|254790735|sp|B0BY57|RECO_RICRO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790736|sp|A8GSP0|RECO_RICRS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157801162|gb|ABV76415.1| DNA repair protein RecO [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908487|gb|ABY72783.1| DNA repair protein [Rickettsia rickettsii str. Iowa] Length = 237 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 121/223 (54%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKEF-SKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDML-NIFL 118 RL +++G + E+++S+ +++ LY S++ L + ERE + + L N Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKTKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG P Sbjct: 120 NLSK--HFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL + I + + A LT+YF N+Y +N Sbjct: 178 YKDKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNN 220 >gi|83951646|ref|ZP_00960378.1| DNA repair protein RecO [Roseovarius nubinhibens ISM] gi|83836652|gb|EAP75949.1| DNA repair protein RecO [Roseovarius nubinhibens ISM] Length = 257 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 3/216 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W+D ++L VR +GE ++I++V+T+ +GR+ G VR G S +++P+LQ G + + WR+RL Sbjct: 4 WRDRGLLLAVRPHGETSVIIDVLTQDHGRYAGVVRGGTSRKLRPVLQPGAELDLVWRARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 ++G F E + + A L L GL ++ + RF L ERE L++ L Sbjct: 64 DSHMGAFTVEPIRASLAVGLGVRQALAGLNAVTAMLRFALAEREAHGPLFERSLGLLEMI 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLPYA 180 + ++ E+ LL +GFGLDL+ C V G DL +VSP++G AV R +A Sbjct: 124 GEAELWPLAYLHWEMALLDELGFGLDLSTCAVLGREANDLSFVSPRTGRAVSRKGAGEWA 183 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +++L LP+ L E A+ L F +T +FL+++ Sbjct: 184 DRLLPLPNCLL-EIAPAPAEDLVQGFAVTGHFLSQH 218 >gi|15604714|ref|NP_220921.1| DNA repair protein RecO [Rickettsia prowazekii str. Madrid E] gi|292572163|gb|ADE30078.1| DNA repair protein RecO [Rickettsia prowazekii Rp22] Length = 236 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIKES-SKKNKFIYQEGNIVDFLWKA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR--FLPEREPCLELYDMLNIFL 118 RL +++G + E+++S+ + + LY S++ L + F E + ++N Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVISLIQELFHEREEHSIFFSFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ LDLTKC V+ VT DL +VSPKS A+ VG P Sbjct: 120 NLSK--NFCFRDYISFELNLLAETGYKLDLTKCCVSHVTTDLTYVSPKSARALSYKVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL ++ I + K A LT+YF N+Y +N Sbjct: 178 YRDKLLILPKFLLAKDSEITLEEKKQALTLTNYFFNRYLFHNN 220 >gi|238650314|ref|YP_002916166.1| DNA repair protein RecO [Rickettsia peacockii str. Rustic] gi|259563684|sp|C4K0L7|RECO_RICPU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238624412|gb|ACR47118.1| DNA repair protein RecO [Rickettsia peacockii str. Rustic] Length = 237 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 123/223 (55%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKEF-SKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELY-DMLNIFL 118 RL +++G + E+++S+ +++ LY S++ L + ERE + + ++N Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFLFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG P Sbjct: 120 NLSK--NFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL + I + + A LT+YF N+Y +N Sbjct: 178 YKDKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNN 220 >gi|126726092|ref|ZP_01741934.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2150] gi|126705296|gb|EBA04387.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2150] Length = 245 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 83/217 (38%), Positives = 125/217 (57%), Gaps = 3/217 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+ VR +GE + I+EV T+ GRH G VR S ++ P LQ G V V+WR+ Sbjct: 1 MEWRDQGAIISVRHHGETSAIVEVFTKNQGRHAGVVRGATSRKIAPFLQPGGQVDVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG F E ++S A ++S+ L L GL ++ L +F LPERE LY+ L+ Sbjct: 61 RLNEHLGTFTIEPIQSR-AHVMSNPLALAGLNAVCALLQFTLPERESHPRLYETSIALLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 S ++ E++LL ++GFGLDL++C VTG DL +VSPKSG AV +S + Sbjct: 120 SISETSDWPLDYLHWEMLLLDDLGFGLDLSECAVTGTQGDLAYVSPKSGRAVSKSGAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 A+++L L L + ++ L + T +FL + Sbjct: 180 ADRLLPLTPCLIS-DASVGVTELIEGLRTTGHFLENH 215 >gi|56416838|ref|YP_153912.1| DNA repair protein RecO [Anaplasma marginale str. St. Maries] gi|81599148|sp|Q5PAM3|RECO_ANAMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56388070|gb|AAV86657.1| hypothetical protein AM680 [Anaplasma marginale str. St. Maries] Length = 238 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 10/227 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTRFTKK---RP-LQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 +L NLG F EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGCAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHN 221 +K+L LP L E + AD + ++ +FL ++ LQ + Sbjct: 177 RDKLLPLPKVLRSISCGVETECCSADEFALSLRILGFFLRRHLLQES 223 >gi|306845265|ref|ZP_07477841.1| DNA repair protein RecO [Brucella sp. BO1] gi|306274424|gb|EFM56231.1| DNA repair protein RecO [Brucella sp. BO1] Length = 182 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/174 (38%), Positives = 98/174 (56%), Gaps = 5/174 (2%) Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + P Sbjct: 1 MGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEHFDDPL 60 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+AEK+L Sbjct: 61 AAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWAEKLLS 120 Query: 186 LPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 LPSF+ + + A D L AF +T YFL ++ + R FL + Sbjct: 121 LPSFV--NDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAV 172 >gi|51473730|ref|YP_067487.1| DNA repair protein RecO [Rickettsia typhi str. Wilmington] gi|81610783|sp|Q68WI7|RECO_RICTY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|51460042|gb|AAU04005.1| possible RecO-like recombinational DNA repair protein [Rickettsia typhi str. Wilmington] Length = 236 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIK-ASSKKNKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR--FLPEREPCLELYDMLNIFL 118 RL +++G + E+++S+ + + LY S+ L + F E + ++N Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVKFLIQELFHEREEHSIFFAFLINYLD 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ +DLTKC V+ VT DL +VSPKS A+ VG P Sbjct: 120 NLSK--NFCFRDYINFELNLLAETGYKIDLTKCCVSHVTTDLTYVSPKSARALSYKVGKP 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL E+ I + K A LT+YF N+Y +N Sbjct: 178 YRDKLLILPKFLLSEDSKITLEEKKQALTLTNYFFNRYLFHNN 220 >gi|99035892|ref|ZP_01314943.1| hypothetical protein Wendoof_01000221 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 240 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 128/227 (56%), Gaps = 17/227 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+KN+IL + T+ +G+ G + N +++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++L +NLG F+ E++ES H + S+ + SI L + LPE EPC LYD Sbjct: 57 SAKLPENLGFFKCELIESPFHHFFQDRLKSITIVSFSSI--LEKVLPESEPCAMLYDNFR 114 Query: 116 IFLNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 F++ K + + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + Sbjct: 115 YFIDVIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKK 174 Query: 175 VGLPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKY 216 VG YA+K+L P L + + + ++T YFLNKY Sbjct: 175 VGDYYADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKY 221 >gi|190570798|ref|YP_001975156.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019675|ref|ZP_03335480.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|254790742|sp|B3CPG9|RECO_WOLPP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190357070|emb|CAQ54467.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994716|gb|EEB55359.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 242 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 129/227 (56%), Gaps = 17/227 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ +I+ V+ YG+KN+IL + T+ +G+ G R N +++ Q NL+ W Sbjct: 1 MRWKDEGVIIAVKKYGDKNLILSLFTKNHGKCRGLTRLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++L +NLG + E++ES H + S+ + SI+ + LPE E C++LYD Sbjct: 57 SAKLPENLGFLKCELIESPFHHFFQDRLKSIAIVSFSSILE--KVLPESESCIKLYDNFR 114 Query: 116 IFLNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 F++ K S + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + Sbjct: 115 HFIDVIKHNSQFWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKK 174 Query: 175 VGLPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKY 216 VG YA+K+L P L + + + ++T YFLNKY Sbjct: 175 VGDCYADKLLPFPQMLHDVYNNNLQNSYSYQEFRLGLKITGYFLNKY 221 >gi|225631179|ref|ZP_03787882.1| DNA repair protein RecO [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591127|gb|EEH12306.1| DNA repair protein RecO [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 240 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 127/227 (55%), Gaps = 17/227 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+KN+IL + T+ +G+ G + N +++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++L +NLG F E++ES H + S+ + SI L + LPE EPC LYD Sbjct: 57 SAKLPENLGFFECELIESPFHHFFQDRLKSITIVSFSSI--LEKVLPESEPCAMLYDNFR 114 Query: 116 IFLNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 F++ K + + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + Sbjct: 115 YFIDVIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKK 174 Query: 175 VGLPYAEKMLVLPSFLWK-EEQTIDADSLKSAFQL----TDYFLNKY 216 VG YA+K+L P L T+ FQL T YFLNKY Sbjct: 175 VGDYYADKLLPFPQMLHDVYNNTLQNSYSFQEFQLGLKVTGYFLNKY 221 >gi|222475203|ref|YP_002563619.1| DNA repair protein RecO [Anaplasma marginale str. Florida] gi|254790506|sp|B9KIQ1|RECO_ANAMF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222419340|gb|ACM49363.1| DNA repair protein RecO [Anaplasma marginale str. Florida] Length = 238 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 10/227 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTRLTKK---RP-LQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 +L NLG F EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHN 221 K+L LP L E + AD + ++ +FL+++ LQ + Sbjct: 177 RNKLLPLPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQES 223 >gi|157964679|ref|YP_001499503.1| DNA repair protein RecO [Rickettsia massiliae MTU5] gi|157844455|gb|ABV84956.1| DNA repair protein RecO [Rickettsia massiliae MTU5] Length = 274 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 120/223 (53%), Gaps = 5/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + Q GN+V W++ Sbjct: 38 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKEF-SRKSKFTYQEGNIVDFLWQA 96 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDML-NIFL 118 RL ++LG + E+++S+ +++ LY S++ L + ERE + L N Sbjct: 97 RLHEHLGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFCSFLINYLD 156 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N K + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG P Sbjct: 157 NLSK--NFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKP 214 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 Y +K+L+LP FL + I + + A LT+YF N+Y +N Sbjct: 215 YKDKLLMLPRFLLSDNIEITLEEKRQALALTNYFFNRYLFHNN 257 >gi|306837524|ref|ZP_07470399.1| DNA repair protein RecO [Brucella sp. NF 2653] gi|306407416|gb|EFM63620.1| DNA repair protein RecO [Brucella sp. NF 2653] Length = 182 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/171 (38%), Positives = 97/171 (56%), Gaps = 5/171 (2%) Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + P Sbjct: 1 MGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEHFDDPL 60 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A+K+L Sbjct: 61 AAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWADKLLA 120 Query: 186 LPSFLWKEEQTIDA---DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 LPSF+ + + A D L AF +T YFL ++ + R FL Sbjct: 121 LPSFV--NDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFL 169 >gi|58418862|gb|AAW70877.1| Recombinational DNA repair protein RecO [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 245 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 124/225 (55%), Gaps = 13/225 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+K++IL + + +G+ G R N S++ Q NL+ W Sbjct: 6 MRWKDEGIIIAAKKYGDKSLILSLFMKNHGKCRGLTRLTNDSSYK----FQVSNLLHAEW 61 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG F+ E++ES SL + S + + LPE EPC LYD F Sbjct: 62 SAKLPENLGFFKCELIESPFHHFFQDSLKSITIVSFSSILEKVLPESEPCAVLYDNFQYF 121 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K S + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 122 IDVIKHGSEPWQGHYLNLELLLLAQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVG 181 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKY 216 YA+K+L P L + + + ++T YFLNKY Sbjct: 182 DYYADKLLPFPQMLHDVYNNNLQNSYSYQEFQLGLKVTGYFLNKY 226 >gi|42520114|ref|NP_966029.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652824|sp|Q73IE9|RECO_WOLPM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|42409851|gb|AAS13963.1| recO-related protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 240 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 128/227 (56%), Gaps = 17/227 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+KN+IL + T+ +G+ G + N +++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++L +NLG + E++ES H + S+ + SI L + LPE EPC LYD L Sbjct: 57 SAKLPENLGFLKCELIESPFHHFFQDRLKSITIVSFSSI--LEKVLPESEPCAMLYDNLR 114 Query: 116 IFLNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 F++ K + + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + Sbjct: 115 YFIDVIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKK 174 Query: 175 VGLPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKY 216 VG YA+K+L P L + + + ++T YFLNKY Sbjct: 175 VGDYYADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKY 221 >gi|161899045|ref|YP_198119.2| DNA repair protein RecO [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 240 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 124/225 (55%), Gaps = 13/225 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+K++IL + + +G+ G R N S++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKSLILSLFMKNHGKCRGLTRLTNDSSYK----FQVSNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG F+ E++ES SL + S + + LPE EPC LYD F Sbjct: 57 SAKLPENLGFFKCELIESPFHHFFQDSLKSITIVSFSSILEKVLPESEPCAVLYDNFQYF 116 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K S + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 117 IDVIKHGSEPWQGHYLNLELLLLAQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVG 176 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKY 216 YA+K+L P L + + + ++T YFLNKY Sbjct: 177 DYYADKLLPFPQMLHDVYNNNLQNSYSYQEFQLGLKVTGYFLNKY 221 >gi|58697108|ref|ZP_00372549.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila simulans] gi|58698226|ref|ZP_00373146.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila ananassae] gi|225630040|ref|YP_002726831.1| DNA repair protein RecO [Wolbachia sp. wRi] gi|254790743|sp|C0R5J8|RECO_WOLWR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|58535253|gb|EAL59332.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila ananassae] gi|58536603|gb|EAL59934.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila simulans] gi|225592021|gb|ACN95040.1| DNA repair protein RecO [Wolbachia sp. wRi] Length = 240 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 127/227 (55%), Gaps = 17/227 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+KN+IL + T+ +G+ G + N +++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++L +NLG F+ E++ES H + S+ + SI+ + LPE EPC LYD Sbjct: 57 SAKLPENLGFFKCELIESSFHHFFQDRLKSITIVSFSSILE--KVLPESEPCAVLYDNFR 114 Query: 116 IFLNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 F++ K + + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + Sbjct: 115 YFIDVIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKK 174 Query: 175 VGLPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKY 216 G YA+K+L P L + + + ++T YFLNKY Sbjct: 175 AGDYYADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKY 221 >gi|254995034|ref|ZP_05277224.1| DNA repair protein RecO [Anaplasma marginale str. Mississippi] Length = 233 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 10/221 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR++L NL Sbjct: 2 GVVMGTRPYGDEHLLLSILTRNRGLRRGLTRLTKK---RP-LQIGDLIDATWRAKLPTNL 57 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 G F +EV+ S + L L SI + LPE EP LYD F + + Sbjct: 58 GHFTYEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAAAAEAEA 117 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y K+L Sbjct: 118 PWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAYRNKLLP 177 Query: 186 LPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHN 221 LP L E + AD + ++ +FL+++ LQ + Sbjct: 178 LPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQES 218 >gi|161702946|ref|YP_303133.2| DNA repair protein RecO [Ehrlichia canis str. Jake] Length = 244 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 80/251 (31%), Positives = 138/251 (54%), Gaps = 21/251 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M WQD I++ +R YG+ II+ + T+++G G R + HR LQ G+ V V W Sbjct: 1 MRWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLARYQKKTIHR----LQIGDHVNVTW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L NLG F++E+++S + ++L + + + LPE E +Y+ L+IF Sbjct: 57 SAKLISNLGYFKYEIIKSTLHHYIHNNLKTMCIAFFTSILDQVLPENEENYTIYNHLDIF 116 Query: 118 LNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 +N + V +I ++ +EL LL +GFGLDL++C V ++L+++SPK+G A+ ++VG Sbjct: 117 MNSVQNKDVNWQIKYLTLELTLLSELGFGLDLSQCAVNNTNENLIFISPKTGKAISQTVG 176 Query: 177 LPYAEKML--------VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 LPY + +L V ++ +K +T K + +T YFL K+ L I Sbjct: 177 LPYKKSLLPLPPLLYNVYNNYTYKYSKT----DFKVSLNVTGYFLKKHFLTEKNITLIKY 232 Query: 229 RENFLGKLLEL 239 R+ + KL++L Sbjct: 233 RDEII-KLIDL 242 >gi|72394258|gb|AAZ68535.1| recO-related protein [Ehrlichia canis str. Jake] Length = 248 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 137/249 (55%), Gaps = 21/249 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 WQD I++ +R YG+ II+ + T+++G G R + HR LQ G+ V V W + Sbjct: 7 WQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLARYQKKTIHR----LQIGDHVNVTWSA 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 +L NLG F++E+++S + ++L + + + LPE E +Y+ L+IF+N Sbjct: 63 KLISNLGYFKYEIIKSTLHHYIHNNLKTMCIAFFTSILDQVLPENEENYTIYNHLDIFMN 122 Query: 120 CHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + V +I ++ +EL LL +GFGLDL++C V ++L+++SPK+G A+ ++VGLP Sbjct: 123 SVQNKDVNWQIKYLTLELTLLSELGFGLDLSQCAVNNTNENLIFISPKTGKAISQTVGLP 182 Query: 179 YAEKML--------VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 Y + +L V ++ +K +T K + +T YFL K+ L I R+ Sbjct: 183 YKKSLLPLPPLLYNVYNNYTYKYSKT----DFKVSLNVTGYFLKKHFLTEKNITLIKYRD 238 Query: 231 NFLGKLLEL 239 + KL++L Sbjct: 239 EII-KLIDL 246 >gi|94498593|ref|ZP_01305147.1| Recombinational DNA repair protein (RecF pathway)-like [Sphingomonas sp. SKA58] gi|94421957|gb|EAT07004.1| Recombinational DNA repair protein (RecF pathway)-like [Sphingomonas sp. SKA58] Length = 244 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/234 (32%), Positives = 116/234 (49%), Gaps = 6/234 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 AI+ VR++GE I ++T +G G+VR G+S M+P+L GN+V+ ++R+R L Sbjct: 8 AIVCAVRAHGEHGAIARLLTPDHGLMAGYVRGGRSRAMRPVLLPGNVVKADFRARTEDQL 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQ-SIVPLFRFLPEREPCLELYDMLNIFLNC-HKIP 124 E+ S A LL+ L + S LPE P LY L L+ P Sbjct: 68 AGLAVELAHSR-APLLAEPLPAAAIDWSCALTAAALPEATPYPALYQALAGLLDAVEAAP 126 Query: 125 SVIG--KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + G V+ EL+LL +GFGLDL++C G DL +VSP+S AV R+ L Y ++ Sbjct: 127 AARGWAVALVRYELLLLTELGFGLDLSRCAALGDVNDLAFVSPRSAAAVSRAGALGYEQR 186 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +L LP FL AD + +LT +FL + + R+ + +L Sbjct: 187 LLPLPPFLVGGGAGDWAD-IMDGLRLTGFFLERSVMTERRTDVLAARDRLVERL 239 >gi|255003183|ref|ZP_05278147.1| DNA repair protein RecO [Anaplasma marginale str. Puerto Rico] gi|255004314|ref|ZP_05279115.1| DNA repair protein RecO [Anaplasma marginale str. Virginia] Length = 233 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 10/221 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR++L NL Sbjct: 2 GVVMGTRPYGDEHLLLSILTRNRGLRRGLTRLTKK---RP-LQIGDLIDATWRAKLPTNL 57 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 G F EV+ S + L L SI + LPE EP LYD F + + Sbjct: 58 GHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAAAAEAEA 117 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y K+L Sbjct: 118 PWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAYRNKLLP 177 Query: 186 LPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHN 221 LP L E + AD + ++ +FL+++ LQ + Sbjct: 178 LPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQES 218 >gi|58617232|ref|YP_196431.1| DNA repair protein RecO [Ehrlichia ruminantium str. Gardel] gi|58416844|emb|CAI27957.1| Putative DNA repair protein recO [Ehrlichia ruminantium str. Gardel] Length = 244 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 111/186 (59%), Gaps = 14/186 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R Y + +I+ V+T+++G G + + LQ G+ + V W + Sbjct: 1 MRWQDQGIVIAIRKYCDNQVIISVLTKKHGLKKGLTK--YYKKTINRLQIGDYINVTWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRF-----LPEREPCLELYDML 114 RL NLG F++E+++S ++++L Q++ + F F LPE E +Y Sbjct: 59 RLISNLGYFKYELIKSTIYYYMTNNL-----QTLCLAFFTFILDQVLPENEENYVIYHYF 113 Query: 115 NIFLNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 +IF+N + ++ +I ++++E++LL +GFGLDL+KC V + L+++SPK+G A+ + Sbjct: 114 DIFINSIQSKNINWQIKYLKLEMVLLSELGFGLDLSKCAVNQTQESLIFISPKTGKAISK 173 Query: 174 SVGLPY 179 ++GLPY Sbjct: 174 NIGLPY 179 >gi|294012225|ref|YP_003545685.1| DNA repair protein RecO [Sphingobium japonicum UT26S] gi|292675555|dbj|BAI97073.1| DNA repair protein RecO [Sphingobium japonicum UT26S] Length = 244 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 6/234 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++ +R +GE I ++T +G G+VR G+S R++P+L GN V+ +R+R + L Sbjct: 8 ALVCALRPHGEHGAIARLLTPGHGLLAGYVRGGRSRRLRPVLLPGNAVKAEFRARTEEQL 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC-HKIP 124 E LE A LL+ L + L LPE P L+ L+ L P Sbjct: 68 AGLTVE-LEHSRAPLLAEPLPAAAIDWACALTAVALPEATPYPALHQALDGVLGAVEAAP 126 Query: 125 SVIG--KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + G ++ EL+LL +GFGLDL +C TG DL +VSP+S AV R+ + Y ++ Sbjct: 127 AARGWATALIRYELLLLAELGFGLDLGRCAATGGNDDLAYVSPRSAAAVSRAGAVGYEDR 186 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +L LP+FL E + ++ +LT +FL + L + RE + +L Sbjct: 187 LLPLPAFLL-EGGAGEWPAILDGLRLTGFFLERSVLTDWRVDVLAARERLVDRL 239 >gi|57239220|ref|YP_180356.1| DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|58579178|ref|YP_197390.1| DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|57161299|emb|CAH58220.1| putative DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|58417804|emb|CAI27008.1| Putative DNA repair protein recO [Ehrlichia ruminantium str. Welgevonden] Length = 244 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 110/186 (59%), Gaps = 14/186 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R Y + +I+ V+T+++G G + + LQ G+ + V W + Sbjct: 1 MRWQDQGIVIAIRKYCDNQVIISVLTKKHGLKKGLTK--YYKKTINRLQIGDYINVTWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRF-----LPEREPCLELYDML 114 RL NLG F++E+++S ++++L Q++ + F F LPE E +Y Sbjct: 59 RLISNLGYFKYELIKSTIYYYITNNL-----QTLCLAFFTFILDQVLPENEENYVIYHYF 113 Query: 115 NIFLNCHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 +IF+N + ++ +I ++++E++LL +GFGLDL+KC V + L+++SPK+G A+ Sbjct: 114 DIFINSIQSKNINWQIKYLKLEMVLLSELGFGLDLSKCAVNQTQESLIFISPKTGKAISE 173 Query: 174 SVGLPY 179 ++GLPY Sbjct: 174 NIGLPY 179 >gi|209545462|ref|YP_002277691.1| DNA repair protein RecO [Gluconacetobacter diazotrophicus PAl 5] gi|209533139|gb|ACI53076.1| DNA repair protein RecO [Gluconacetobacter diazotrophicus PAl 5] Length = 254 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 6/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ ++T G G R G + + + Q GNL+R +WR Sbjct: 1 MEWEAPALVLSASPYGESSAIVHLLTEDLGLVHGLARGGTARANRALWQPGNLIRASWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL LG E++ A+L+S+ L L L S + LPEREP ++ +L F + Sbjct: 61 RLPDQLGNLSGELVHGSAARLMSAPLALAMLASACAVADGTLPEREPHPRIFHLLTRFFS 120 Query: 120 CHKI-PSVIG----KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + P + G ++ E LL ++G+G+DL+ C VTG + +L WVSP++G AV + Sbjct: 121 LLSLDPDMAGWGGMAALLRWEACLLGDLGYGMDLSACAVTGGSAELAWVSPRTGRAVSDA 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + ++L LP E + +LT +FL + A Sbjct: 181 AAGEWRPRLLRLPPLFLNESDPGTVQDWRDGLRLTGHFLARDA 223 >gi|162148788|ref|YP_001603249.1| DNA repair protein recO [Gluconacetobacter diazotrophicus PAl 5] gi|189039658|sp|A9HRQ4|RECO_GLUDA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|161787365|emb|CAP56960.1| putative DNA repair protein recO [Gluconacetobacter diazotrophicus PAl 5] Length = 254 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 6/223 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ ++T G G R G + + + Q GNL+R +WR Sbjct: 1 MEWEAPALVLSASPYGESSAIVHLLTEDLGLVHGLARGGTARANRALWQPGNLIRASWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL LG E++ A+L+S+ L L L S + LPEREP ++ +L F + Sbjct: 61 RLPDQLGNLSGELVHGSAARLMSAPLALAMLASACAVADGTLPEREPHPRIFHLLTRFFS 120 Query: 120 CHKI-PSVIG----KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + P + G ++ E LL ++G+G+DL+ C VTG + +L WVSP++G AV + Sbjct: 121 LLSLDPDMAGWGGMAALLRWEACLLGDLGYGMDLSACAVTGGSAELAWVSPRTGRAVSDA 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + ++L LP E + +LT +FL + A Sbjct: 181 AAGEWRPRLLRLPPLFLDESDPGTVQDWRDGLRLTGHFLARDA 223 >gi|114327658|ref|YP_744815.1| DNA repair protein recO [Granulibacter bethesdensis CGDNIH1] gi|122327371|sp|Q0BTG0|RECO_GRABC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114315832|gb|ABI61892.1| DNA repair protein recO [Granulibacter bethesdensis CGDNIH1] Length = 250 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 9/221 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+L + YGE + + V + G + G VR G S + I Q GNLV W + Sbjct: 1 MEWTAPCIVLSAQPYGEADCLAAVFSEDQGLYRGLVRGGTSRQRGGIWQPGNLVMARWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RLA LG E++ A + L L L+S+ + LP+RE + L L Sbjct: 61 RLADQLGSLTAELIHPAAALAMDDPLNLAVLRSLCTVAEGALPDREAHPAAFIPLPGLLT 120 Query: 120 CHKIPSVIGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ G++ ++ E +LL+ +G+GLDL +C VTG L +VSP++G AV Sbjct: 121 --RLSLGGGQVVEDAIRWEAILLRELGYGLDLQRCAVTGQVSGLHYVSPRTGRAVSSDAA 178 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSL--KSAFQLTDYFLNK 215 P+ +++L LP+FL + +T D+D + + +LT YFL++ Sbjct: 179 EPWLDRLLPLPAFLLHQAET-DSDPVAWRDGLRLTGYFLSR 218 >gi|254796817|ref|YP_003081654.1| DNA repair protein RecO [Neorickettsia risticii str. Illinois] gi|254590066|gb|ACT69428.1| DNA repair protein RecO [Neorickettsia risticii str. Illinois] Length = 238 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 109/194 (56%), Gaps = 8/194 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L + E + + T+ YG ++ G R + + GN+V W + Sbjct: 1 MQWENEGIVLSNKGLVENKAVTTLFTKDYG-----LKRGLCSR-KATIDVGNVVYCKWSA 54 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLN 119 RL LG FR EV E L + L L +++ L + LPE EP E+Y + L Sbjct: 55 RLESQLGYFRVEVKEIISPFLFTDYKKLKLLNAVLSILLKVLPENEPQKEIYKIFIQLLQ 114 Query: 120 CHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K S + +++++L +L+++GF LDL++C VTG T++L ++SPK+G AV ++VG Sbjct: 115 AFKSETSCYYRQYIEMDLSILRHLGFQLDLSRCTVTGETKNLFYISPKTGRAVTKAVGEA 174 Query: 179 YAEKMLVLPSFLWK 192 Y +K+L+LP L+K Sbjct: 175 YKDKLLLLPPSLYK 188 >gi|332188696|ref|ZP_08390410.1| DNA repair protein RecO [Sphingomonas sp. S17] gi|332011260|gb|EGI53351.1| DNA repair protein RecO [Sphingomonas sp. S17] Length = 243 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 86/228 (37%), Positives = 119/228 (52%), Gaps = 9/228 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ AIIL VR +GE I+ +TR G G+VR G+S ++P+LQ GN + WR+ Sbjct: 1 MHRVAPAIILSVRPHGEHGAIVRALTRDDGVQPGYVRGGRSRALRPVLQPGNAIIGEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 R A+ L E S A L L G++ + L LPE +P LYD L+ L Sbjct: 61 RTAEQLPALTLEPGHSR-AGLHGEPLAAAGIEWLCALTAAALPEEQPYPILYDALDAVLT 119 Query: 120 C-HKIPSVIG--KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 PS G V+ EL+LL +GFGLDL +C VTG T DL +VSPKSG AV Sbjct: 120 AIESAPSARGWAGALVRYELLLLGQLGFGLDLERCTVTGGTDDLAFVSPKSGAAVSVGAA 179 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK---YALQHN 221 Y ++ LP FL +E D + +A ++T +FL + L+H+ Sbjct: 180 FGYEARLFSLPLFL-REGGAADWPDIFAAGRITAHFLARDILAGLRHD 226 >gi|88608141|ref|YP_506346.1| putative DNA repair protein RecO [Neorickettsia sennetsu str. Miyayama] gi|88600310|gb|ABD45778.1| putative DNA repair protein RecO [Neorickettsia sennetsu str. Miyayama] Length = 237 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 8/194 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L + E + + T+ YG ++ G R I GN+V W Sbjct: 1 MQWENEGIVLSNKGLVENKAVTTLFTKDYG-----LKRGLCSRKTTI-DVGNVVYCRWSG 54 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLN 119 RL LG FR EV E L + L L +++ L + LPE EP E+Y L Sbjct: 55 RLEVQLGYFRVEVKEIISPFLFTDYKKLKLLNAVLSILLKVLPENEPQKEIYKTFIQLLQ 114 Query: 120 CHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K ++ + +++++L +L+ +GF LDL++C VTG T+DL ++SPK+G AV ++VG Sbjct: 115 AFKSNTLCYYRQYIEMDLSILQYLGFQLDLSRCAVTGETKDLFYISPKTGRAVTKAVGEA 174 Query: 179 YAEKMLVLPSFLWK 192 Y +K+L+LP L+K Sbjct: 175 YKDKLLLLPPSLYK 188 >gi|91205107|ref|YP_537462.1| DNA repair protein RecO [Rickettsia bellii RML369-C] gi|157827560|ref|YP_001496624.1| DNA repair protein RecO [Rickettsia bellii OSU 85-389] gi|122425954|sp|Q1RJU1|RECO_RICBR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790733|sp|A8GXI7|RECO_RICB8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91068651|gb|ABE04373.1| DNA repair protein RecO [Rickettsia bellii RML369-C] gi|157802864|gb|ABV79587.1| DNA repair protein RecO [Rickettsia bellii OSU 85-389] Length = 241 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 4/222 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G + S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVAKES-SKKSKFIYQEGNVVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ + + LY S++ L + L ERE + +L +L+ Sbjct: 60 RLHEHIGIAKCELVKSYIGHFIINKAKLYAFNSVISLIKELFHEREEHYNFFSLLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL +G+ LD TKC V+ TQDL ++SPKSG AV VG PY Sbjct: 120 -NLAKNFCFHDYINFELALLAEMGYELDFTKCGVSNTTQDLAYLSPKSGRAVSYEVGAPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 +K+L LP FL I + + A LT YF N+Y L HN Sbjct: 179 KDKLLPLPKFLLSGNDKITLEEKRQALNLTSYFFNRY-LFHN 219 >gi|258543012|ref|YP_003188445.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01] gi|256634090|dbj|BAI00066.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01] gi|256637150|dbj|BAI03119.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-03] gi|256640202|dbj|BAI06164.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-07] gi|256643259|dbj|BAI09214.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-22] gi|256646314|dbj|BAI12262.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-26] gi|256649367|dbj|BAI15308.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-32] gi|256652353|dbj|BAI18287.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655411|dbj|BAI21338.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-12] Length = 263 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/236 (31%), Positives = 116/236 (49%), Gaps = 6/236 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L GE + + V+T YG G G S + + Q GN+V+ + R A Sbjct: 15 ALVLFAGVQGETSARVHVLTEDYGPLRGIAYGGASKAGRALWQPGNVVKTSLHKRSAAAP 74 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 + E+L + A+LL + L L +QS+ L LPE +PC L+ L Sbjct: 75 LQISAELLYACAARLLDAPLALSMVQSVCVLADVTLPEADPCPFLFAETVRLLTFLGYDP 134 Query: 126 VIGKI-----FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 VI + V+ E+ LL +GFGLDL+ C VTG T++L +VSP++G AV + Sbjct: 135 VIAEREGMPHVVRWEMALLATLGFGLDLSACAVTGSTENLHYVSPRTGRAVSEEGAGEWK 194 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LPSFL EQT +A + +LT +FL + A + R+ +L Sbjct: 195 DRLLPLPSFLQDTEQTGNAADWLAGLRLTGHFLARDAFGQRHLPLPAARQRLYDRL 250 >gi|296535950|ref|ZP_06898099.1| recombination protein O [Roseomonas cervicalis ATCC 49957] gi|296263723|gb|EFH10199.1| recombination protein O [Roseomonas cervicalis ATCC 49957] Length = 250 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/238 (34%), Positives = 118/238 (49%), Gaps = 2/238 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQ AI+L R +GE ++ V+T +GRH G V G S + Q GNLV V WR Sbjct: 1 MEWQAPAIVLEARPHGEGAAVVSVLTEDHGRHAGLVHGGASRAQSGLWQPGNLVEVRWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYD-MLNIFL 118 RLA+ LG E++ A L L L LQS L LPERE ++ +L + Sbjct: 61 RLAEQLGSLSGEMVHPTAALALDEPLTLALLQSACALATDALPEREAQPRIFSGLLALMA 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + +++ E +LL+ +G+GLDL+ C VTG ++L VSP+SG AV P Sbjct: 121 QLGRGAPALLADYIRWEALLLEGLGYGLDLSVCAVTGAAENLTHVSPRSGRAVSAEAAAP 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 Y +++L LP FL + D +LT +FL + A RE + ++ Sbjct: 181 YRDRLLPLPLFLLGGQDERDPAEWLKGLRLTGHFLERDAFGARHRAVPPARERLVSRI 238 >gi|329115619|ref|ZP_08244341.1| DNA repair protein RecO [Acetobacter pomorum DM001] gi|326695047|gb|EGE46766.1| DNA repair protein RecO [Acetobacter pomorum DM001] Length = 263 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 6/236 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L GE + + V+T YG G G S + + Q GN+V+ ++ R A Sbjct: 15 ALVLFAGVQGETSARIHVLTEDYGPLRGIAYGGASKAGRALWQPGNVVKTSFHKRSAAAP 74 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 + E+L + A+LL + L L +QS+ L LPE +PC L+ L Sbjct: 75 LQISGELLYACAARLLDAPLALGMVQSVCVLADVTLPEADPCPFLFAETVRLLTFLGYDP 134 Query: 126 VIGKI-----FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ + V+ E+ LL +GFGLDL+ C VTG T++L +VSP++G AV + Sbjct: 135 VVAEREGMPHVVRWEMALLVTLGFGLDLSACAVTGSTENLHYVSPRTGRAVSEEGAGEWK 194 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LPSFL EQT A + +LT +FL + A + R+ +L Sbjct: 195 DRLLPLPSFLRDTEQTGHAADWLAGLRLTGHFLARDAFGQRHLPLPAARQRLYDRL 250 >gi|326402842|ref|YP_004282923.1| DNA repair protein RecO [Acidiphilium multivorum AIU301] gi|325049703|dbj|BAJ80041.1| DNA repair protein RecO [Acidiphilium multivorum AIU301] Length = 251 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 1/190 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + AI+L V ++GE ++ V+ +G G R G R PI Q GNL+ W + Sbjct: 1 MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL + LG E++ A ++ L L L++ + LPERE + L L Sbjct: 61 RLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I V+ EL LL+ +G+GLDL+ C ++G +DL +VSP++G AV R + Sbjct: 121 GIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDW 180 Query: 180 AEKMLVLPSF 189 A ++L LP+F Sbjct: 181 APRLLKLPAF 190 >gi|218515340|ref|ZP_03512180.1| DNA repair protein RecO [Rhizobium etli 8C-3] Length = 84 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 47/84 (55%), Positives = 62/84 (73%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSS 84 RL ++LGEFR E + A+L+ + Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMET 84 >gi|307294438|ref|ZP_07574282.1| DNA repair protein RecO [Sphingobium chlorophenolicum L-1] gi|306880589|gb|EFN11806.1| DNA repair protein RecO [Sphingobium chlorophenolicum L-1] Length = 244 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 6/238 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++ +R +GE I ++T +G G+VR G+S RM+P+L N V+ +R+R + L Sbjct: 8 ALVCALRPHGEHGAIARLLTPDHGLLAGYVRGGRSRRMRPVLLPANAVKAEFRARTEEQL 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC---HK 122 E+ S A LL+ L + L LPE P LY L+ L Sbjct: 68 AGLTVELDHSR-APLLAEPLPAAAIDWACALTAVALPEGTPYPALYQALDGVLGAVEAAP 126 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 ++ EL++L +GFGLDLT+C TG DL ++SP+S AV R+ Y ++ Sbjct: 127 AARGWAAALIRYELLMLAELGFGLDLTRCAATGGRDDLAYISPRSAAAVSRAGAAGYEDR 186 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 +L LP+FL E D ++ +LT +FL + L + RE + +L ++ Sbjct: 187 LLPLPAFLL-EGGAGDWPAILDGLRLTGFFLERSVLTDWRVDVLAARERLVDRLKRVV 243 >gi|148260213|ref|YP_001234340.1| DNA repair protein RecO [Acidiphilium cryptum JF-5] gi|254790500|sp|A5FXT9|RECO_ACICJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146401894|gb|ABQ30421.1| DNA repair protein RecO [Acidiphilium cryptum JF-5] Length = 251 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 1/191 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + AI+L V ++GE ++ V+ +G G R G R PI Q GNL+ W + Sbjct: 1 MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL + LG E++ A ++ L L L++ + LPERE + L L Sbjct: 61 RLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I V+ EL LL+ +G+GLDL+ C ++G +DL +VSP++G AV R + Sbjct: 121 GIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDW 180 Query: 180 AEKMLVLPSFL 190 ++L LP+FL Sbjct: 181 VPRLLKLPAFL 191 >gi|88607051|ref|YP_505316.1| DNA repair protein RecO [Anaplasma phagocytophilum HZ] gi|123494993|sp|Q2GJY5|RECO_ANAPZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|88598114|gb|ABD43584.1| DNA repair protein RecO [Anaplasma phagocytophilum HZ] Length = 245 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 10/228 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD +I+ + YG+ IL V TR +G +R ++ + LQ G+ V V WR+ Sbjct: 1 MQWQDHGMIVSMTPYGDTRSILSVFTRNHGICNAMIR---LNKKKQSLQIGDRVCVTWRA 57 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFL 118 RLA NLG F E++ S L L S+ +++ +P + LYD L F Sbjct: 58 RLANNLGYFNSCEIISSAFYAYFQDHSKLLCLSSVTSTIYKSVPTNDAHPILYDYLIEFA 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + ++++EL +L +GF LDL++C V +LL++SPK+G A+ G+ Sbjct: 118 EAAECGGHWYNEYLKLELEILSQLGFALDLSRCAVYHCEDNLLYISPKTGRAISERAGVS 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKS-----AFQLTDYFLNKYALQHN 221 Y + LP L + Q+ YFL+++ L + Sbjct: 178 YRHLLFPLPQILRDLHNGTHTEQCSRKEFLLCLQILGYFLHRHLLSDD 225 >gi|83311360|ref|YP_421624.1| recombinational DNA repair protein [Magnetospirillum magneticum AMB-1] gi|82946201|dbj|BAE51065.1| Recombinational DNA repair protein [Magnetospirillum magneticum AMB-1] Length = 206 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 42/94 (44%), Positives = 54/94 (57%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD ++L VR +GE + ++TR +GRH G V GQ +PILQ GNLVR W Sbjct: 1 MEWDDDGVVLAVRRHGETGAVASLLTRSHGRHAGLVHGGQGRANRPILQPGNLVRARWTG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI 94 RL + LG FR E+L +H A L + L L S Sbjct: 61 RLPEQLGNFRLEMLHAHAAAFLDDAARLAALGSA 94 >gi|241761300|ref|ZP_04759388.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374207|gb|EER63704.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 254 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 25/226 (11%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 + A++L R + E I+ ++T Q G G+++ S +P+L GN V+ +WR ++ + Sbjct: 6 EPALLLTSRFHSENGAIIRLLTEQ-GLLTGYIQGAHSRYRRPLLFVGNYVQASWRDKVGR 64 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNCHKI 123 +L E+ S ++ L L I P LPE +P E Y +F N ++ Sbjct: 65 SLPSINIELRHSR-GLIMEHPLAALFLSWICPFTASVLPEGQP--EPY----LFQNLKRL 117 Query: 124 PSVIGKI---------FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 ++I K V+ EL+LL +G+GL L++C++TG L WVSPK AV R Sbjct: 118 LAIIEKTDEPVLWMTELVRFELLLLSELGYGLHLSRCIITGQEACLDWVSPKHHAAVSRQ 177 Query: 175 VGLPYAEKMLVLPSFLWKEEQTI------DADSLKSAFQLTDYFLN 214 + +K+LVLP FL K ++ D +SL+ +L+ +FL Sbjct: 178 AAQGHEKKLLVLPDFL-KAPFSVSCLDLPDQESLQQGLKLSGFFLR 222 >gi|260752832|ref|YP_003225725.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856306|ref|YP_162408.2| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ZM4] gi|258552195|gb|ACV75141.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775302|gb|AAV89297.2| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ZM4] Length = 254 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 25/226 (11%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 + A++L R + E I+ ++T Q G G+++ S +P+L GN V+ +WR ++ + Sbjct: 6 EPALLLTSRFHSENGAIIRLLTEQ-GLLTGYIQGAHSRYRRPLLFVGNYVQASWRDKVGR 64 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNCHKI 123 +L E+ S ++ L L I P LPE +P E Y +F N ++ Sbjct: 65 SLPSINIELRHSR-GLIMEHPLAALFLSWICPFTASVLPEGQP--EPY----LFQNLKRL 117 Query: 124 PSVIGKI---------FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 ++I K V+ EL+LL +G+GL L++C++TG L WVSPK AV R Sbjct: 118 LAIIEKTDEPVLWMTELVRFELLLLSELGYGLHLSRCIITGQEACLDWVSPKHHAAVSRQ 177 Query: 175 VGLPYAEKMLVLPSFLWKEEQTI------DADSLKSAFQLTDYFLN 214 + +K+LVLP FL K ++ D ++L+ +L+ +FL Sbjct: 178 AAQGHEKKLLVLPDFL-KAPFSVSCLDLPDQEALQQGLKLSGFFLR 222 >gi|6647943|sp|Q9ZD01|Y549_RICPR RecName: Full=Uncharacterized protein RP549 gi|3861098|emb|CAA14998.1| unknown [Rickettsia prowazekii] Length = 135 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 42/91 (46%), Positives = 57/91 (62%) Query: 131 FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFL 190 ++ EL LL G+ LDLTKC V+ VT DL +VSPKS A+ VG PY +K+L+LP FL Sbjct: 29 YISFELNLLAETGYKLDLTKCCVSHVTTDLTYVSPKSARALSYKVGKPYRDKLLILPKFL 88 Query: 191 WKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 ++ I + K A LT+YF N+Y +N Sbjct: 89 LAKDSEITLEEKKQALTLTNYFFNRYLFHNN 119 >gi|23011689|ref|ZP_00051976.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 117 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%) Query: 132 VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLW 191 V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G PY +++L LP FL Sbjct: 2 VRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPYRDRLLPLPPFLR 61 Query: 192 KEE------QTIDADSLKSAFQLTDYFLNKY 216 + QT D +++ F LT YFL+++ Sbjct: 62 DRDQPGSGWQTPDEHAVREGFTLTGYFLDQH 92 >gi|103486573|ref|YP_616134.1| recombinational DNA repair protein (RecF pathway)-like protein [Sphingopyxis alaskensis RB2256] gi|98976650|gb|ABF52801.1| Recombinational DNA repair protein (RecF pathway)-like protein [Sphingopyxis alaskensis RB2256] Length = 192 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 5/140 (3%) Query: 12 VRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRF 71 +R++GE IL +T + G G+VR G+S R++PIL GN V + RSR + LG Sbjct: 1 MRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATV 60 Query: 72 EVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCHKI-PSVI-- 127 E+LES A LL L + + L LPE +P LY L+ L + PS Sbjct: 61 ELLESR-APLLGEPLAAAAIDWVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQW 119 Query: 128 GKIFVQIELMLLKNIGFGLD 147 + EL+LL +GFGL+ Sbjct: 120 ALALGRYELLLLAELGFGLE 139 >gi|296282559|ref|ZP_06860557.1| hypothetical protein CbatJ_03005 [Citromicrobium bathyomarinum JL354] Length = 198 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 7/150 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AI+L R +GE +I ++T + G +V GQ R++P++ GN V + R+ Sbjct: 1 MQLKAPAIVLAARPHGENAVIARMLTHEAGMVAAYVAGGQGRRLRPVVIPGNSVEADIRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 R A L + E++ S A L+ L + + L LPER P LYD L L+ Sbjct: 61 RSASQLPFGKVELVASR-APWLNEPLPAAAILWVTALTASTLPERNPYPSLYDALGGLLD 119 Query: 120 --CHKIPSVIG--KIFVQIELMLLKNIGFG 145 CH PS G + E++LL+ +G+G Sbjct: 120 AICHA-PSARGWAPALLSYEVLLLRELGYG 148 >gi|330814140|ref|YP_004358379.1| GTP-binding protein Era [Candidatus Pelagibacter sp. IMCC9063] gi|327487235|gb|AEA81640.1| GTP-binding protein Era [Candidatus Pelagibacter sp. IMCC9063] Length = 228 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 16/240 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L + +Y E + I +T ++G H G + S + + LQ GN +NW+S Sbjct: 1 MNWKDIGYLLKISNYSENSSIATFVTCEHGLHKGVIYGATSKKKKNYLQIGNKFSLNWKS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 + LG + E+ + AK + L +QS+ L + L ER EL+D + F+N Sbjct: 61 KSEDALGYYDLELKNAVTAKFFDEPIKLSFIQSLSELCCKTLAERYDYSELFDYTDFFIN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL-LWVSPKSGGAVCRSVGLP 178 + + K+++ E LL IGF L+ +L W+ L Sbjct: 121 NISKANAL-KLYILWEKELLTAIGFELNPDNKNFNFYKNNLSQWI-------------LE 166 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 ++ + P+FL + L + + L ++ + N I +RE KL E Sbjct: 167 IDKQKFLYPNFLIDSNSVYEDTDLYEGLVINKFILKRFVFEPNRIRFPEVRERIEKKLNE 226 >gi|262277164|ref|ZP_06054957.1| DNA repair protein RecO [alpha proteobacterium HIMB114] gi|262224267|gb|EEY74726.1| DNA repair protein RecO [alpha proteobacterium HIMB114] Length = 208 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 15/168 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D +L V + E + +++V +R++G G V S + +P LQ GN +++N+ S Sbjct: 1 MRWSDIGYLLSVSATKENSSLVKVFSREHGCVTGVVYGSSSKKKKPDLQIGNKIKLNFNS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ-SIVPLFRFLPEREP---CLELYDMLNI 116 + LG F E++E+ K + L L SI + + +PE++ C + YD L Sbjct: 61 KNEDALGYFSIELMENISIKFFNDLKKLNLLIISIEVISKIMPEQQKYTECFDEYDQL-- 118 Query: 117 FLNCHKIPSVIG---KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 I S+ G K ++ E LKNIG+G+DL + V + +L Sbjct: 119 ------IKSLEGDSLKSYLIWEFNFLKNIGYGVDLNEEGFNPVIKSIL 160 >gi|71083742|ref|YP_266462.1| recombination protein O [Candidatus Pelagibacter ubique HTCC1062] gi|91763222|ref|ZP_01265186.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1002] gi|71062855|gb|AAZ21858.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1062] gi|91717635|gb|EAS84286.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1002] Length = 226 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 2/149 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D A ++ Y E +II EV T +G+ G + G S +++ LQ GN + VN+ S Sbjct: 1 MNWDDSAYLVSKNRYSENSIIAEVFTENHGKISGIIFGGTSKKIKNYLQIGNKIYVNYNS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 + +G F+ E+L++ + L + S + L + L E + E++ +++ F Sbjct: 61 KSVTRIGYFKIEILKALTPLYFDQNQKLSCITSAMHLIKLLTAEAQSNKEIFKLIDKFFE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + I K ++ EL LLK +G+ L+L Sbjct: 121 ILNSENWIQK-YIFWELELLKLLGYDLEL 148 >gi|149186742|ref|ZP_01865053.1| hypothetical protein ED21_29626 [Erythrobacter sp. SD-21] gi|148829650|gb|EDL48090.1| hypothetical protein ED21_29626 [Erythrobacter sp. SD-21] Length = 198 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 9/165 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + AI+L R +GE +I ++T + G +V G+ +++P++ GNLV R+ Sbjct: 1 MHLRAPAILLAARPHGETAVIARLLTEESGVVAAYVAGGRGRQLRPVVIPGNLVEAEIRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 + L R E+ +S L+ L + L LPER P LY L L Sbjct: 61 KSDSQLPFARLELAQSR-GPWLTEPLPAAAIAWTCALTASALPERNPYPSLYSALAALLE 119 Query: 120 --CHKIPSVIG--KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL 160 C+ PS G E++LL+ +G+G TK V+ G+ Q L Sbjct: 120 AICNA-PSARGWAGALATYEVLLLRELGYG--GTKPVIEGLEQAL 161 >gi|87200674|ref|YP_497931.1| recombinational DNA repair protein (RecF pathway)-like [Novosphingobium aromaticivorans DSM 12444] gi|87136355|gb|ABD27097.1| Recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 202 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 5/149 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AI+ VR +GE ++ +MT ++G +V + ++P+L GNL+ R Sbjct: 1 MQIRAPAILCSVRPHGEHGAVVRLMTEEHGLAAAYVAGARGRELRPLLIPGNLLEAEVRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 R A L R E++ S L+ L G+ L LPE P LYD L L+ Sbjct: 61 RAASQLPSARLELVASR-GPWLTEPLPSAGIGWACALTAATLPEGHPYPLLYDSLGALLD 119 Query: 120 CHKI-PSVIG--KIFVQIELMLLKNIGFG 145 + PS G ++ E++LL+ +G+G Sbjct: 120 AICLAPSARGWARVLAGYEVLLLREVGYG 148 >gi|85374495|ref|YP_458557.1| hypothetical protein ELI_08340 [Erythrobacter litoralis HTCC2594] gi|84787578|gb|ABC63760.1| hypothetical protein ELI_08340 [Erythrobacter litoralis HTCC2594] Length = 200 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 5/143 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 AI+L R +GE +I ++T ++G G+V G+ +++P++ GNLV + R++ L Sbjct: 9 AILLAARPHGETAVIARLLTEEFGMVAGYVAGGRGRQLRPVVIPGNLVELELRAKSDSQL 68 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH-KIP 124 + E++ES LS L +Q L LPER LY L L+ + P Sbjct: 69 PFAKLELVESR-GPWLSEPLPAAAIQWATALTATALPERNAYPNLYSALVALLDAVCQAP 127 Query: 125 SVIG--KIFVQIELMLLKNIGFG 145 S G + E +LL+ +G+G Sbjct: 128 SARGWAPALLSYEALLLRELGYG 150 >gi|85709082|ref|ZP_01040148.1| DNA repair protein RecO [Erythrobacter sp. NAP1] gi|85690616|gb|EAQ30619.1| DNA repair protein RecO [Erythrobacter sp. NAP1] Length = 200 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 AI++ R++GE +I +MT ++G +V G+ +++P++ GN + RS+ L Sbjct: 7 AILVAARAHGETAVIARLMTEEHGLVAAYVAGGRGRQLRPVVIPGNSLEAEIRSKSDSQL 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN--CHKI 123 R E+ S A ++ L + L LPER P L+ L CH Sbjct: 67 PFARIELAVSR-APWMTEPLPAAAIGWACALTASTLPERNPYPSLFSAFEALLEAICHA- 124 Query: 124 PSVIG--KIFVQIELMLLKNIGFG 145 PS G V E MLL+ +G+G Sbjct: 125 PSARGWLAAMVAYEAMLLRELGYG 148 >gi|326386768|ref|ZP_08208389.1| recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208821|gb|EGD59617.1| recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 202 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 7/145 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +AI+ +R +GE I+ +T +G +V + ++P+L GN + V R+R Sbjct: 6 EAILCAMRPHGEHGGIIRALTGDHGMVAAYVSGARGRTLRPVLIPGNTLAVEIRARGGSQ 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN--CHK 122 L R E++ S A L L + L LPE P L+ L L+ CH Sbjct: 66 LPGARTELVASR-APWLGEPLPAAAIDWATALTAATLPEGHPYPALHTALGALLDAICHA 124 Query: 123 IPSVIG--KIFVQIELMLLKNIGFG 145 PS G ++ E +LL+ +G+G Sbjct: 125 -PSARGWARVLAGYEALLLREVGYG 148 >gi|6647944|sp|Q9ZD02|Y548_RICPR RecName: Full=Uncharacterized protein RP548 gi|3861097|emb|CAA14997.1| unknown [Rickettsia prowazekii] Length = 115 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIKES-SKKNKFIYQEGNIVDFLWKA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREP 106 RL +++G + E+++S+ + + LY S++ L + ERE Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVISLIQELFHEREE 106 >gi|253576084|ref|ZP_04853416.1| DNA repair protein RecO [Paenibacillus sp. oral taxon 786 str. D14] gi|251844427|gb|EES72443.1| DNA repair protein RecO [Paenibacillus sp. oral taxon 786 str. D14] Length = 249 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 22/202 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR------MQPILQAGNLV 54 M ++ + I++ YGE N I+ + T G+ VR + + QP G V Sbjct: 1 MLYRVEGIVIRSMDYGEGNKIITLCTETSGKIGVLVRGAKKVKSRHGALTQPFTH-GEYV 59 Query: 55 RVNWRSRLAQ-NLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELY 111 L N GE ++ESH + L LFL Y + L + L + E + Sbjct: 60 FFRQNGGLGTLNQGE----MIESHFS--LREDLFLAAYASYACELLDKTLQDEEVGSFWF 113 Query: 112 DMLNIFLN---CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 L L+ K P ++ +F E+ +L+ G+G CV G D +VSP+ G Sbjct: 114 TQLKACLDGLSSGKDPQIVTHLF---EMKILQAAGYGPSFESCVSCGRVDDSPYVSPRLG 170 Query: 169 GAVCRSVGLPYAEKMLVLPSFL 190 G +CRS M V P L Sbjct: 171 GRLCRSCRHQDPAAMQVTPGVL 192 >gi|172056863|ref|YP_001813323.1| DNA repair protein RecO [Exiguobacterium sibiricum 255-15] gi|229485534|sp|B1YL74|RECO_EXIS2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|171989384|gb|ACB60306.1| DNA repair protein RecO [Exiguobacterium sibiricum 255-15] Length = 249 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 31/239 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------SHRMQPILQAGNLV 54 M + + ++L YGE N I+ ++TR+YG+ R + + QP ++A + Sbjct: 1 MIDKAEGLVLRTVVYGESNKIITLLTREYGKLAVMARGAKKPGSRFNAASQPFVRA---I 57 Query: 55 RVNWRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 V RSR LG+ + +V+ + L Y + + + L ER P LYD+ Sbjct: 58 YVYPRSR---GLGQLKSADVITGYSKIRQDVFLMAYAMYLLELADKALDERVPQPALYDL 114 Query: 114 LNIFLNCHK---IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L P V+ I +EL LL+++G L C V G + S GG Sbjct: 115 FVDGLEAMDEGLDPDVVSFI---VELRLLRHLGIAPHLNGCTVCGSVEAPFAFSLNHGGL 171 Query: 171 VCR----------SVGLPYAEKMLVLPSFLWKEEQTIDA--DSLKSAFQLTDYFLNKYA 217 +CR S+ A+ + V + + T+D ++ + Q+ D ++ +Y+ Sbjct: 172 LCRRHRQEDEHAVSLTESVAKMLYVFSVYDFSRIGTVDVKPETKRLLRQIMDAYMERYS 230 >gi|188585832|ref|YP_001917377.1| DNA repair protein RecO [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350519|gb|ACB84789.1| DNA repair protein RecO [Natranaerobius thermophilus JW/NM-WN-LF] Length = 257 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 26/186 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVRVN 57 + DA+++ R Y + + I+ + T YGR V+ + ++ I+Q+ GN + Sbjct: 5 YNSDAVVIRSRDYRDYDKIINLFTPYYGRVSAVVKGVKKPKSKLAGIVQSFTYGNYQLYS 64 Query: 58 WRS--RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 +S RL Q F+ L + L+S+ + + L + + +PE E E + Sbjct: 65 GKSLGRLVQGKVLHGFQELRTDLV-LMSAGMCILEL-----IDKAIPEGE---EYPALFG 115 Query: 116 IFLNCHKI------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSG 168 + L+C + PS++ +IF E L+ N+G +L+ C+ G +TQ L+ P++G Sbjct: 116 VTLSCFHLLEKSYPPSLVLRIF---EAKLIHNLGVSPELSGCINHGSITQGNLYFDPETG 172 Query: 169 GAVCRS 174 G +C + Sbjct: 173 GLICET 178 >gi|171463194|ref|YP_001797307.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. necessarius STIR1] gi|254764652|sp|B1XTL6|RECO_POLNS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|171192732|gb|ACB43693.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 244 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 35/167 (20%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRVNWRSR 61 + A +L Y E ++IL+V TRQYGR + + G Q ++P+LQ + V+W + Sbjct: 9 EPAFVLHSIPYKETSLILDVFTRQYGR-MALIAKGAKRQHSTLRPVLQRFQPLLVSWSGK 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------------LFRFLPEREPCLE 109 E R L+ S ++ G+ S+V L +FL + + Sbjct: 68 -----SELR----------TLTKSEWVGGMPSLVGDALLCGFYLNELLVKFLAREDDYEK 112 Query: 110 LYD----MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 LYD +N N + +I Q EL LL+ G+ L +CV Sbjct: 113 LYDRYAETINALSNLEFESKGLEEILRQFELSLLQETGYAAALDRCV 159 >gi|241895550|ref|ZP_04782846.1| recombination protein O [Weissella paramesenteroides ATCC 33313] gi|241871128|gb|EER74879.1| recombination protein O [Weissella paramesenteroides ATCC 33313] Length = 263 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 10/174 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 DAI++ R + EK+++++++TRQ G+ + ++R+G+S R Q + L + + Sbjct: 6 DAIVMYQRDHKEKDLMVKMLTRQAGKRMFYIRHGKSQRYQFSAEIQPLRTATFEGTINST 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIV--PLFRFLPEREPCLELYDM----LNIFLN 119 F +V + L + + L + + + + +P YD+ LN LN Sbjct: 66 GMSFINDVKATKDTSFLMTDIVLNAYMTYILGLIDAAFVDNQPIPRWYDLVIEALNK-LN 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 P I F E+ LL G KCV+ G + L S + G +C+ Sbjct: 125 SGLDPQGIANYF---EIQLLPVFGMQPTWGKCVICGRSDLPLDFSEEFNGTLCQ 175 >gi|320106411|ref|YP_004182001.1| DNA repair protein RecO [Terriglobus saanensis SP1PR4] gi|319924932|gb|ADV82007.1| DNA repair protein RecO [Terriglobus saanensis SP1PR4] Length = 245 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 24/183 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 QD+AI+L + E ++++ + TR GR G R+ R + L+ VR NW + Sbjct: 5 QDEAIVLRTWPFQEADLLVSLFTRHQGRVKGVARHAMRSRRRFGGALEPMTYVRANWAEK 64 Query: 62 LAQNLGEFR-FEVLES------HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 Q L FE+L S A+ + S+ L+S LPE+ P +++ + Sbjct: 65 PRQELVRLNSFEILWSPLREPVDYARSAALSVVAEVLESA------LPEQAPEDDVFRLA 118 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLL---KNIGFGLDLTKCVVTGVT--QDLLWVSPKSGG 169 + + +G++++ + LL + +G+ DL+ C V G + + SP G Sbjct: 119 LTTIERMQ----VGEVWLPVTYFLLWVTRLLGWMPDLSSCAVCGESLRGKGFFYSPARDG 174 Query: 170 AVC 172 A C Sbjct: 175 ATC 177 >gi|304398618|ref|ZP_07380490.1| DNA repair protein RecO [Pantoea sp. aB] gi|304353829|gb|EFM18204.1| DNA repair protein RecO [Pantoea sp. aB] Length = 242 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 41/234 (17%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + GR + +S R ++ LQ + V W Sbjct: 4 WQR-AFVLHSRPFSETSLLLDLFSESEGRVRVLAKGARSRRSNLKGALQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDML 114 R EV A+ +S +L L G+ L+ R L + P EL+ Sbjct: 63 R---------GEVKTLRNAEAVSLALPLSGITLYCGLYVNELVSRVLQQESPFPELF--- 110 Query: 115 NIFLNC-HKIPSVIGK---IFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSG 168 +LNC + S GK + EL LL ++G+G+D C +G V+ D+ + + Sbjct: 111 FDYLNCLQALASTHGKPEPALRRFELALLGHLGYGVDFLHCAGSGEPVSDDMTYSYREER 170 Query: 169 GAVCRSVGLPYAEKMLVLPSFLWKEEQTI------DADSLKSAFQLTDYFLNKY 216 G + A ++ SF +E + DAD+L++A + T L Y Sbjct: 171 GFI--------ASLVVNNRSFTGRELHALCEREFPDADTLRAAKRFTRIALKPY 216 >gi|224542129|ref|ZP_03682668.1| hypothetical protein CATMIT_01304 [Catenibacterium mitsuokai DSM 15897] gi|224524966|gb|EEF94071.1| hypothetical protein CATMIT_01304 [Catenibacterium mitsuokai DSM 15897] Length = 245 Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 26/231 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAG-NLVRVNWR 59 + + ++L + E + IL + T YGR + +R S + + + +L +N R Sbjct: 8 KTEGVVLKITPSKESDAILSIYTHDYGRISVYGKGIRKINSKNARGVTPSSLSLFELNIR 67 Query: 60 ---SRLAQNLG-EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 S L + G E+ + + +L+ L Y +R++PE +P L+ Y L Sbjct: 68 KGLSTLVRATGIEYYIHIQDHIETDILAQCLLEY-------YYRYVPENKPDLDTYAFLV 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L I+ I + ++K+ G L++ CV G T + S GG VCR Sbjct: 121 DALKAIDTGYSYKLIYALILVFIMKDNGIELEVDGCVHCGHTS-VTSFSLVDGGFVCRKH 179 Query: 176 GLPYAEKM----LVLPSFLWK------EEQTIDADSLKSAFQLTDYFLNKY 216 P +M L ++K + +ID LK + +Y++++Y Sbjct: 180 QTPQDVQMSIEALKAIRHIYKTPMAHIDTLSIDESVLKEILFIFEYYIDEY 230 >gi|320529425|ref|ZP_08030513.1| DNA repair protein RecO [Selenomonas artemidis F0399] gi|320138391|gb|EFW30285.1| DNA repair protein RecO [Selenomonas artemidis F0399] Length = 242 Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 17/190 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG--RHLGFVRNGQSHRMQPILQAGNLVRVNW 58 M + + IILG +++GE + ++ V TR+ G R F R + L + V+ Sbjct: 1 MLYTAEGIILGAKNWGEADKVMTVFTRERGMLRAAAF----GCRRPRSALAGAMQMFVHA 56 Query: 59 RSRLAQN--LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLN 115 +LA+ L + V+ +H AKL + L + + R FLPE P + +D L Sbjct: 57 DFQLAEGPRLETVKTAVVRAHHAKLSADLTALAYATFVAEVVREFLPEGVPDEQFFDRLA 116 Query: 116 IFLNCHKI--PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAV 171 L + P + V L +L G G +C+ G +T + + + + GGA+ Sbjct: 117 QILTAFETRNPRITALAAV---LQILSAAGLGQTYERCLHCGTEITGNAFFHA-REGGAL 172 Query: 172 CRSVGLPYAE 181 C AE Sbjct: 173 CAGCRTADAE 182 >gi|297544410|ref|YP_003676712.1| DNA repair protein RecO [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842185|gb|ADH60701.1| DNA repair protein RecO [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 248 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 6/173 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L S GE + + + T+ YG+ + + + + + + N+ Sbjct: 5 KTEAIVLKNNSIGETDKMATLFTKNYGKLRAVAKGARRSKSRFVNAIRPFMVANYVIFEG 64 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFLNC 120 QN ++E++ESH K + L + + S + + + L E + +LY L Sbjct: 65 QNYYYIDQWELIESH--KNIEKDLVKFSVASYISETVNKILEENQKSEKLYQFLKHSFKA 122 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + IF V L L+ +G+ L C+V G +DL + S GG VC Sbjct: 123 VNELQIDPLIFIVSYNLKLVSLLGYMPQLDNCIVCGKREDLKYFSNSCGGVVC 175 >gi|308187804|ref|YP_003931935.1| DNA repair protein recO (Recombination protein O) [Pantoea vagans C9-1] gi|308058314|gb|ADO10486.1| DNA repair protein recO (Recombination protein O) [Pantoea vagans C9-1] Length = 259 Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 41/234 (17%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + GR + +S R Q LQ + V W Sbjct: 21 WQR-AFVLHSRPFSETSLLLDLFSENEGRVRVLAKGARSRRSQLKGALQPFTPLLVRWSG 79 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDML 114 R +V A+ +S +L L G+ L+ R L P EL+ Sbjct: 80 R---------GDVKTLRNAEAVSLALPLSGITLYCGLYVNELVSRVLQPESPFQELF--- 127 Query: 115 NIFLNC-HKIPSVIGK---IFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSG 168 +LNC + S GK + EL LL ++G+G+D C +G V+ D+ + + Sbjct: 128 FDYLNCLQALASTHGKPEPALRRFELALLGHLGYGVDFLHCAGSGEPVSDDMTYSYREER 187 Query: 169 GAVCRSVGLPYAEKMLVLPSFLWKEEQTI------DADSLKSAFQLTDYFLNKY 216 G + A ++ SF +E + DAD+L++A + T L Y Sbjct: 188 GFI--------ASLVVNQRSFTGRELHALCEREFPDADTLRAAKRFTRIALKPY 233 >gi|317049178|ref|YP_004116826.1| DNA repair protein RecO [Pantoea sp. At-9b] gi|316950795|gb|ADU70270.1| DNA repair protein RecO [Pantoea sp. At-9b] Length = 242 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 19/223 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ + GR + +S R Q LQ + V W Sbjct: 4 WQR-AFVLHSRPYSETSLLLDLFSESEGRVRVLAKGARSRRSQLKGALQPFTPLLVRWGG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELY-DMLNIF 117 R GE + E+ L S + LY GL L R L + P +L+ D LN Sbjct: 63 R-----GEVKTLRNAEAVSLALPLSGITLYCGLYVNELLSRVLEQEIPFSDLFFDYLNCI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 + EL LL ++G+G+D C +G V + + + G + V Sbjct: 118 QALAAASGTPEPALRRFELALLGHLGYGVDFLHCAGSGEEVDDGMTYSYREEKGFIASLV 177 Query: 176 --GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 + + L LW E DADSL++A + T L Y Sbjct: 178 VNQRSFTGRQL---RALW-ERDFPDADSLRAAKRFTRMALKPY 216 >gi|289578135|ref|YP_003476762.1| DNA repair protein RecO [Thermoanaerobacter italicus Ab9] gi|289527848|gb|ADD02200.1| DNA repair protein RecO [Thermoanaerobacter italicus Ab9] Length = 248 Score = 43.1 bits (100), Expect = 0.030, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 6/173 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L S GE + + + T+ YG+ + + + + + + N+ Sbjct: 5 KTEAIVLKNNSIGETDKMATLFTKNYGKLRAVAKGARRSKSRFVNAIRPFMVANYVIFEG 64 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFLNC 120 QN ++E++ESH K + L + + S + + + L E + +LY L Sbjct: 65 QNYYYIDQWELIESH--KNIEKDLVKFSVASYISETVNKILEENQKSEKLYQFLKHSFKA 122 Query: 121 HKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + IF+ L L+ +G+ L C+V G +DL + S GG VC Sbjct: 123 VDELQIDPLIFIASYNLKLVSLLGYMPQLDNCIVCGKREDLKYFSNSCGGVVC 175 >gi|323141986|ref|ZP_08076837.1| DNA repair protein RecO [Phascolarctobacterium sp. YIT 12067] gi|322413518|gb|EFY04386.1| DNA repair protein RecO [Phascolarctobacterium sp. YIT 12067] Length = 253 Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 33/192 (17%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 DDA++L V+++ + T+++G+ L F+ G + N RL Q Sbjct: 11 DDALVLHVKNWQTADKYAVCFTKEHGK-LRFIAYGARYEK------------NIHGRLLQ 57 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSI-----------VPLFRFLPE-REPCLELYD 112 EV + L S L +S+ L L E R P ELY+ Sbjct: 58 PFANLHIEVQQGQKIDKLRSCELLQMPKSMDMQQMAYAAVASELTAVLTEDRVPQPELYE 117 Query: 113 MLNIFLNC--HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKS 167 ML L + P ++ + + LL GF LT CV G Q+ W SP Sbjct: 118 MLGAALAALMQRNPRLV---VLSYAIKLLAATGFAPQLTHCVHCGEAVTAQENAWFSPLQ 174 Query: 168 GGAVCRSVGLPY 179 GG +C S Y Sbjct: 175 GGLICSSCRSTY 186 >gi|183602375|ref|ZP_02963741.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis HN019] gi|219683310|ref|YP_002469693.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis AD011] gi|241191271|ref|YP_002968665.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196677|ref|YP_002970232.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254790512|sp|B8DSY8|RECO_BIFA0 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|183218294|gb|EDT88939.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis HN019] gi|219620960|gb|ACL29117.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis AD011] gi|240249663|gb|ACS46603.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251231|gb|ACS48170.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177386|gb|ADC84632.1| RecO [Bifidobacterium animalis subsp. lactis BB-12] gi|295794264|gb|ADG33799.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis V9] Length = 239 Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 25/197 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSH---RMQPILQAGNLV-- 54 ++D+A++L GE + I+ ++TR +G+ VR +S R++P ++ L+ Sbjct: 4 YRDEAVVLRTAKLGEADRIITLLTRDHGKVRAVAKGVRRTKSRFGARLEPFMRVDLLLGE 63 Query: 55 -RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R R A+++ + + + A ++S ++P E EP Y + Sbjct: 64 GRTFDSVRQAESISAYAGGITGDY-ATYTAASAMCETAADLLPA-----EHEPAAAQYRL 117 Query: 114 LNIFLNC-----HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 L L H P I ++ L + G+ + L CVV G +QD+ + S +G Sbjct: 118 LIAALGALSRHLHD-PQAIALSYI---LRAMSLAGWTIRLDSCVVCG-SQDVEFFSASAG 172 Query: 169 GAVCRSVGLPYAEKMLV 185 GA+C + P A ++ V Sbjct: 173 GAMCPNDHTPDAVRVPV 189 >gi|293394831|ref|ZP_06639121.1| recombination protein O [Serratia odorifera DSM 4582] gi|291422582|gb|EFE95821.1| recombination protein O [Serratia odorifera DSM 4582] Length = 243 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 15/221 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T +GR + +S R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRWGG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDMLNIF 117 R G+ + E+ L S + LY + L + E+E L +D L Sbjct: 63 R-----GDIKTLRNAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEADYSLLFFDYLQCL 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 + Q EL LL ++G+G+D C +G V + + + G + V Sbjct: 118 QALAAAERSPEQALRQFELALLHHLGYGVDFLHCAGSGEPVDDGMTYRYREEKGFIASLV 177 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 Y+ L + E Q DAD+L++A + T L Y Sbjct: 178 VDHYSFTGRELRAL--AERQFPDADTLRAAKRFTRMALKPY 216 >gi|193214068|ref|YP_001995267.1| DNA repair protein RecO [Chloroherpeton thalassium ATCC 35110] gi|254790516|sp|B3QU22|RECO_CHLT3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|193087545|gb|ACF12820.1| DNA repair protein RecO [Chloroherpeton thalassium ATCC 35110] Length = 259 Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 14/164 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGN---LVR 55 M + AI+L +YG+++ I+ TR +G+ G V+ ++ + +L+ GN LV Sbjct: 1 MIRKTQAIVLRTINYGDQSKIVTFFTRSFGKLTGLVKGYRNPKGKFASVLEIGNDLDLVL 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDML 114 +R Q + E VL + SS L L + L R E + L ++++L Sbjct: 61 YKKDTREVQLITE---AVLRAPMLGATSSLEQLSALHQTLELIRLTTENDDAHLGVFELL 117 Query: 115 NIFL---NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + L N + + + Q++L+ L +GF L+ KCV+TG Sbjct: 118 HATLQKINVSRKNHISFFFYFQVQLISL--LGFRLNFQKCVLTG 159 >gi|53804479|ref|YP_113918.1| DNA repair protein RecO [Methylococcus capsulatus str. Bath] gi|67461356|sp|Q608M9|RECO_METCA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|53758240|gb|AAU92531.1| DNA repair protein RecO [Methylococcus capsulatus str. Bath] Length = 242 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 7/154 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVNWRSR 61 D A +L R Y E +++LE+ T ++GR +G + G Q +LQ + V+W R Sbjct: 17 DHAYLLHRRDYRETSLLLELFTLRHGR-IGVIAKGARRGRQGFAAVLQPFVPLLVSWSGR 75 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L +L ++LF G L R LP +PC EL+ L Sbjct: 76 --GELANLNHAEAAGIGVRLQHTALFC-GFYLNELLMRLLPPHDPCPELFGTYRGGLETL 132 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL LL+ IG+GL L +G Sbjct: 133 AAGEDLETALRSFELSLLEAIGYGLQLRVEAESG 166 >gi|295398007|ref|ZP_06808063.1| recombination protein O [Aerococcus viridans ATCC 11563] gi|294973765|gb|EFG49536.1| recombination protein O [Aerococcus viridans ATCC 11563] Length = 266 Score = 42.0 bits (97), Expect = 0.065, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 12/178 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------PILQAGNLVR 55 Y + D I+L R Y EK++++++ T+++G+ + F++N Q P ++A + Sbjct: 6 YARFDGIVLFTRKYKEKDLLIKIFTKEFGKRMFFIKNIQRQNNGLREIAFPYMRASFVGT 65 Query: 56 VNWRS-RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 +N + + + F + + + ++ GL F+ E + L+ L Sbjct: 66 INDKGFSFLNDTDDVLFPKTTISDIQANAYAAYMTGLTD-AAFEDFIKEDKVFDLLWHGL 124 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + PSV+ IF E+ LL G + C + G Q S + G +C Sbjct: 125 GK-IEAGVDPSVVANIF---EIQLLPKFGVAPNFRSCAICGRDQGRFDYSMQYAGVLC 178 >gi|313896076|ref|ZP_07829630.1| DNA repair protein RecO [Selenomonas sp. oral taxon 137 str. F0430] gi|312975501|gb|EFR40962.1| DNA repair protein RecO [Selenomonas sp. oral taxon 137 str. F0430] Length = 242 Score = 42.0 bits (97), Expect = 0.066, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 21/185 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG--RHLGF----VRNGQSHRMQPILQAGNLV 54 M + + IILG +++GE + ++ V TR+ G R F R+ + MQ V Sbjct: 1 MLYTAEGIILGAKNWGEADKVMTVFTRERGMLRAAAFGCRRPRSALAGAMQ------MFV 54 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDM 113 +++ L + V+ +H AKL + L + + R FLPE P + +D Sbjct: 55 HADFQLAEGPRLETVKTAVVRAHHAKLSADLTALAYATFVAEVVREFLPEGVPDEQFFDR 114 Query: 114 LNIFLNC--HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGG 169 L L + P V V L +L G +C+ G +T D + + + GG Sbjct: 115 LAEILTAFERRNPRVAALAAV---LQILSAAGLRQTYERCLHCGTEITGDAFFHAGE-GG 170 Query: 170 AVCRS 174 A+C S Sbjct: 171 ALCPS 175 >gi|311895950|dbj|BAJ28358.1| putative DNA repair protein RecO [Kitasatospora setae KM-6054] Length = 248 Score = 42.0 bits (97), Expect = 0.066, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 27/218 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------SHRMQPILQAGNLVRV 56 ++DD I+L + GE + I+ +TRQ+G+ R + R++P + V V Sbjct: 4 FRDDGIVLRTQKLGEADRIITFLTRQHGQVRAVARGVRRTKSKFGARLEPF----SHVDV 59 Query: 57 NWRSRLAQNLGE-----FRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLE 109 + SR + +G + E + + A+++ + + G + RF E +P ++ Sbjct: 60 QFFSRGSDLVGRTLPLCTQVETIAPYGARIVDDYTRYTAGTAMLETAERFAENEGQPAVQ 119 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPK 166 Y +L L + + + + ++ LL+++ G+G T C G+ + S + Sbjct: 120 QYLLLVGAL--RTLAAGTHQAHLVLDAFLLRSLAVNGYGASFTDCARCGLPGPNRFFSLQ 177 Query: 167 SGGAVCRSV-----GLPYAEKMLVLPSFLWKEEQTIDA 199 +GG +C +P E +++L + L + QT D Sbjct: 178 AGGVLCGDCRVPGSAVPSPETLVLLGALLSGDWQTADG 215 >gi|332638282|ref|ZP_08417145.1| DNA replication and repair protein RecO [Weissella cibaria KACC 11862] Length = 264 Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 18/178 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 DAI++ + EK+++++++T+Q G+ + +++NG+S R Q L + L Sbjct: 6 DAIVMYQQDRKEKDLMVKMLTKQGGKRMFYIKNGKSKRYQFAADVQPLTVATFEGTLNPT 65 Query: 66 LGEFRFEVLESHCAKLL-----SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 F V ESH ++ L ++ Y L I F + +P + Y+ L Sbjct: 66 GLSFINAVKESHQSRELMMDVTKNAYMTYILGLIDAAF---VDNQPIGKWYEWAR--LAI 120 Query: 121 HKI-----PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 KI P I F E+ LL G +CVV G L S K G +C+ Sbjct: 121 EKIERGLDPQGIANFF---EIKLLPAFGLEPTWGECVVCGRRDLPLDFSEKLNGTLCQ 175 >gi|259046830|ref|ZP_05737231.1| DNA repair protein RecO [Granulicatella adiacens ATCC 49175] gi|259036453|gb|EEW37708.1| DNA repair protein RecO [Granulicatella adiacens ATCC 49175] Length = 260 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 10/175 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNL-VRVNWRSRLAQ 64 D I++ ++Y EK+++++++TR +G+ + F+RN Q P+ A + R + + Q Sbjct: 8 DGIVIMRQTYREKDMLVKILTRDHGKLMFFLRNAQQSN-HPLTAATQVFTRATFLGHIHQ 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N F + +SH K + L Q+++ L + + + L I Sbjct: 67 NGFSF---LKDSHDIKPATIVLQDVKAQAVLAYLTQLTDAVMDDHIVNKTVFQLLWDSIE 123 Query: 125 SVIGKIFVQI-----ELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 ++ I ++ E+ +L+ G ++ CV+ DL+ S + G +C++ Sbjct: 124 AINNGIDAEVILRFFEIKILRYFGVEVEWQHCVICNRDTDLVDFSIQKHGCLCKN 178 >gi|145588595|ref|YP_001155192.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|254764653|sp|A4SVW4|RECO_POLSQ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145047001|gb|ABP33628.1| DNA replication and repair protein RecO [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 244 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 35/170 (20%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVNWRS 60 + A +L Y E ++IL+V TRQ+GR + + G ++P+LQ + V+W Sbjct: 8 DEPAFVLHSIPYKETSLILDVFTRQHGR-MALIAKGAKRPHSVLRPVLQRFQPLLVSWSG 66 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------------LFRFLPEREPCL 108 + E R L+ S ++ G+ S+V L +FL + Sbjct: 67 K-----SELR----------TLTKSEWVGGMPSLVGDALLCGFYLNELLVKFLAREDDYE 111 Query: 109 ELYD----MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 LYD +N N + +I EL LL+ G+ L +CV T Sbjct: 112 RLYDRYSETINALSNLEFESKGLEEILRPFELSLLQETGYAAALDRCVET 161 >gi|117924217|ref|YP_864834.1| DNA replication and repair protein RecO [Magnetococcus sp. MC-1] gi|117607973|gb|ABK43428.1| DNA replication and repair protein RecO [Magnetococcus sp. MC-1] Length = 242 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 41/91 (45%) Query: 97 LFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 ++R LP + +L+ L L+ + ++ + LL N+GFG + C G Sbjct: 103 VYRLLPVEDANPKLFGALQEALDRLEAGEAALEVVGLWQGFLLHNLGFGWQVAHCAGCGG 162 Query: 157 TQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 DL + S K VC G P+ ++L LP Sbjct: 163 ETDLRFFSTKRNQTVCAPCGTPHRHRLLPLP 193 >gi|326389847|ref|ZP_08211411.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus JW 200] gi|325994115|gb|EGD52543.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus JW 200] Length = 248 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 6/173 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L GE + I + T+ YG+ + + + + + V N+ Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIFEG 64 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFLNC 120 QN ++E++E+H K + L + + S + + + L E + LY L L Sbjct: 65 QNYYYIDQWELIEAH--KNIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKA 122 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + IF+ L L+ +G+ L CVV G ++L + S GGAVC Sbjct: 123 VDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVC 175 >gi|167039987|ref|YP_001662972.1| DNA repair protein RecO [Thermoanaerobacter sp. X514] gi|300914077|ref|ZP_07131393.1| DNA repair protein RecO [Thermoanaerobacter sp. X561] gi|307724690|ref|YP_003904441.1| DNA repair protein RecO [Thermoanaerobacter sp. X513] gi|238687639|sp|B0K710|RECO_THEPX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166854227|gb|ABY92636.1| DNA repair protein RecO [Thermoanaerobacter sp. X514] gi|300889012|gb|EFK84158.1| DNA repair protein RecO [Thermoanaerobacter sp. X561] gi|307581751|gb|ADN55150.1| DNA repair protein RecO [Thermoanaerobacter sp. X513] Length = 248 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 6/173 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L GE + I + T+ YG+ + + + + + V N+ Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIFEG 64 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFLNC 120 QN ++E++E+H K + L + + S + + + L E + LY L L Sbjct: 65 QNYYYIDQWELIEAH--KNIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKA 122 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + IF+ L L+ +G+ L CVV G ++L + S GGAVC Sbjct: 123 VDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVC 175 >gi|194290150|ref|YP_002006057.1| DNA repair protein reco [Cupriavidus taiwanensis LMG 19424] gi|193223985|emb|CAQ69994.1| DNA repair protein [Cupriavidus taiwanensis LMG 19424] Length = 295 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 25/164 (15%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH---RMQPILQAGNLVRVNWRS 60 + +L Y E ++IL+V TR YGR L V G ++ +LQ + V V+W Sbjct: 63 EQPGFVLHAWPYRETSLILDVFTRDYGR-LSMVAKGAKRPHSALRAVLQHFHPVSVSWSG 121 Query: 61 RLAQNLGEFRFEV-------LESHCAKLLSSSLFLYGLQSIVPLFRFLPERE--PCLELY 111 R GE + + L S+ +L L L RF P + P L + Sbjct: 122 R-----GEVKTLTKAEWVGGMPPLAGDALLSAFYLNEL-----LMRFCPREDAHPVLFRH 171 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + H P+ G + E +LL+ GF + +C+ TG Sbjct: 172 YLSTLTRLAHGEPA--GLVLRSFERVLLQETGFAVAFDQCLSTG 213 >gi|162449950|ref|YP_001612317.1| DNA repair protein RecO (recombination protein O) [Sorangium cellulosum 'So ce 56'] gi|161160532|emb|CAN91837.1| DNA repair protein RecO (recombination protein O) [Sorangium cellulosum 'So ce 56'] Length = 239 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 15/173 (8%) Query: 15 YGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEV 73 +GE ++++ + T Q G R + S + P L+ +L+RV R L + Sbjct: 24 FGEADLLVGLFTEQGGLISATARGARRSAKRFPALEPMHLLRVTLEIRPGAELAQLTEAA 83 Query: 74 LE-------SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 +E + +L + L ++ I P E+ EL +L+ P Sbjct: 84 IERPRLRLAADLGRLEVAGRALRWVREIAPAHTA--EQAAWSELNQLLDRLDEVSTPPPQ 141 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW---VSPKSGGAVCRSVG 176 + + L LL G+GL+LT+CV G D P GG VCR+ G Sbjct: 142 --ALLAETGLRLLVAFGWGLELTQCVRCGRACDTTQSACADPARGGLVCRACG 192 >gi|94968222|ref|YP_590270.1| DNA repair protein RecO [Candidatus Koribacter versatilis Ellin345] gi|119361444|sp|Q1ISF4|RECO_ACIBL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|94550272|gb|ABF40196.1| DNA replication and repair protein RecO [Candidatus Koribacter versatilis Ellin345] Length = 244 Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M Q +AI+L E ++++ + TR G+ G + + R + L+ VRV + Sbjct: 1 MLKQSEAIVLRTYPMREADLLVTLFTRAEGKIKGVAKAAKKSRRRFGGALEPLTHVRVYY 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLS--SSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 R Q L +VL S + + +L L + ++ LP+REP ++ L+ Sbjct: 61 EDRERQELTRLDSCDVLASPMSAEVDYPRALALGHVAEVID--DLLPDREPNDAVF-RLS 117 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVC 172 + + +P + +L +++ GF DL CVV G D + P G VC Sbjct: 118 LAVLGQLVPGAVWMPLTYFDLWMVRLAGFLPDLMHCVVCGEELDDRAFFHPLVDGLVC 175 >gi|269140065|ref|YP_003296766.1| DNA repair protein [Edwardsiella tarda EIB202] gi|267985726|gb|ACY85555.1| DNA repair protein [Edwardsiella tarda EIB202] gi|304559893|gb|ADM42557.1| DNA recombination and repair protein RecO [Edwardsiella tarda FL6-60] Length = 242 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T +GR + +S R ++ LQ + + W Sbjct: 4 WQR-AFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE--LYDMLNIF 117 R GE + E+ L S + LY + L + E+E C +D L+ Sbjct: 63 R-----GEVKTLRSAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYSALFFDYLHCI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + EL LL +G+G+D C +G Sbjct: 118 QHLAAHAGSPEPALRRFELALLTQLGYGVDFLHCAGSG 155 >gi|307266974|ref|ZP_07548491.1| DNA repair protein RecO [Thermoanaerobacter wiegelii Rt8.B1] gi|306918023|gb|EFN48280.1| DNA repair protein RecO [Thermoanaerobacter wiegelii Rt8.B1] Length = 248 Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 6/173 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L GE + I + T+ YG+ + + + + + V N+ Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRLFVVANYVIFEG 64 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFLNC 120 QN ++E++E+H K + L + + S + + + L E + LY L L Sbjct: 65 QNYYYIDQWELIEAH--KNIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKA 122 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + IF+ L L+ +G+ L CVV G ++L + S GGAVC Sbjct: 123 VDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVC 175 >gi|238920903|ref|YP_002934418.1| DNA repair protein RecO, [Edwardsiella ictaluri 93-146] gi|238870472|gb|ACR70183.1| DNA repair protein RecO, putative [Edwardsiella ictaluri 93-146] Length = 242 Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T +GR + +S R ++ LQ + + W Sbjct: 4 WQR-AFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE--LYDMLNIF 117 R GE + E+ L S + LY + L + E+E C +D L+ Sbjct: 63 R-----GEVKTLRSAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYNALFFDYLHCI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + EL LL +G+G+D C +G Sbjct: 118 QHLAAHAGSPEPALRRFELALLAQLGYGVDFLHCAGSG 155 >gi|73541937|ref|YP_296457.1| DNA repair protein RecO [Ralstonia eutropha JMP134] gi|119361473|sp|Q46Z20|RECO_RALEJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|72119350|gb|AAZ61613.1| DNA replication and repair protein RecO [Ralstonia eutropha JMP134] Length = 291 Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 25/164 (15%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH---RMQPILQAGNLVRVNWRS 60 + +L Y E ++IL+V TR +GR L V G ++P+LQ + + ++W Sbjct: 59 EQPGFVLHAWPYRETSLILDVFTRDHGR-LSMVAKGAKRPHSALRPVLQHFHPISLSWSG 117 Query: 61 RLAQNLGEFRFEV-------LESHCAKLLSSSLFLYGLQSIVPLFRFLPERE--PCLELY 111 R GE + + L S+ +L L L RF P + P L + Sbjct: 118 R-----GEVKTLTRAEWVGGMPPLAGDALLSAFYLNEL-----LMRFCPREDGHPALFRH 167 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 M + H G + E +LL+ GF + +C+ TG Sbjct: 168 YMATLTRLAHG--EAAGLVLRSFERVLLQETGFAVAFDQCLSTG 209 >gi|254521728|ref|ZP_05133783.1| DNA repair protein RecO [Stenotrophomonas sp. SKA14] gi|219719319|gb|EED37844.1| DNA repair protein RecO [Stenotrophomonas sp. SKA14] Length = 239 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 14/158 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M D +L R+Y E ++++EV++ Q+GR +G + G S +L+A L + W Sbjct: 2 MIEDDTGFVLHARAYRETSLLVEVLSAQHGR-IGLLARGVSTAKGQVLRAA-LQPLQWIR 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-------RFLPEREPCLELYDM 113 AQ GE + A+ L ++ L G Q+++ F R P ++P ELY Sbjct: 60 FSAQQRGEL----AQLRAAEALDAAPRLVG-QAMLAGFYLSELTLRLAPRQDPLPELYLA 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + + + + E LL +G G +L Sbjct: 115 YGEARARLAVGAGLAWTLRRFERELLSALGLGFELDSA 152 >gi|42559491|sp|Q8RB48|RECO_THETN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 247 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 14/180 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + + +AI+L EK+ I + TR YG+ + + + + + + N+ Sbjct: 3 FLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYVIF 62 Query: 62 LAQNLGEF-------RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 QN FE +E K +S Y ++I R L E++ +LY Sbjct: 63 EGQNYYYIDQWELVKNFENIEKDLKKFALAS---YISETIS---RVLEEKQKNTKLYFFT 116 Query: 115 NIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + +V IF+ L L+ +G+ L C V G ++L + S GGAVC+ Sbjct: 117 KHSLEAVESLNVETSIFLFSYTLKLISLLGYMPVLDSCAVCGKKENLSYFSSSCGGAVCK 176 >gi|85059763|ref|YP_455465.1| DNA repair protein RecO [Sodalis glossinidius str. 'morsitans'] gi|119361486|sp|Q2NS15|RECO_SODGM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|84780283|dbj|BAE75060.1| DNA repair protein RecO [Sodalis glossinidius str. 'morsitans'] Length = 260 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 95/245 (38%), Gaps = 26/245 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T Q GR + +S R ++ +LQ + W Sbjct: 4 WQR-AFVLHARPYSETSLLLDFFTEQQGRVRVLAKGARSRRSALKGVLQPFTPLLARWSG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLEL-YDMLNIF 117 R GE + E L S L LY GL L R L +L YD L+ Sbjct: 63 R-----GEVKTLRSAEPVSLGLPLSGLMLYSGLYINELLSRVLDHETDYSKLFYDYLHCL 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVG 176 + EL LL ++G+G+D C +G D + + SV Sbjct: 118 QWLAGATGSPEPALRRFELALLSHLGYGVDFLHCAGSGEPVDDAMTYRYREEKGFTASV- 176 Query: 177 LPYAEKMLVLPSFLWKEEQTI------DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 +L SF +E + + D D+L++A + T L Y L + H L Sbjct: 177 ------LLDRYSFSGRELRALAEGEFPDIDTLRAAKRFTRMALKPY-LGGKPLKSHELFR 229 Query: 231 NFLGK 235 FL + Sbjct: 230 QFLDR 234 >gi|308069927|ref|YP_003871532.1| DNA repair protein RecO [Paenibacillus polymyxa E681] gi|305859206|gb|ADM70994.1| DNA repair protein recO (Recombination protein O) [Paenibacillus polymyxa E681] Length = 250 Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 19/185 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR------MQPILQAGNLV 54 M ++ + I++ YGE N I+ + T G+ VR + + QP G V Sbjct: 1 MLYRVEGIVIRSMDYGEGNKIITLCTESGGKAGVLVRGAKKSKSRHAALTQP-FTYGEFV 59 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 N GE +++SH + Y + L R L + E + L Sbjct: 60 FFRNTGLGTLNAGE----IIQSHHTLREDITKAAYASYACELLDRVLQDEETGAFWFKQL 115 Query: 115 NIFLNC---HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGG 169 L K P ++ I+ E +L+ G+ L C+ +G + ++VSP+ GG Sbjct: 116 KACLEALESGKDPLIVMSIY---EFKILQAAGYAPQLDACISSGQQCADEDMFVSPRLGG 172 Query: 170 AVCRS 174 +CRS Sbjct: 173 VLCRS 177 >gi|20807456|ref|NP_622627.1| recombinational DNA repair protein [Thermoanaerobacter tengcongensis MB4] gi|20515981|gb|AAM24231.1| Recombinational DNA repair protein [Thermoanaerobacter tengcongensis MB4] Length = 257 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 14/180 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + + +AI+L EK+ I + TR YG+ + + + + + + N+ Sbjct: 13 FLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYVIF 72 Query: 62 LAQNLGEF-------RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 QN FE +E K +S Y ++I R L E++ +LY Sbjct: 73 EGQNYYYIDQWELVKNFENIEKDLKKFALAS---YISETIS---RVLEEKQKNTKLYFFT 126 Query: 115 NIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + +V IF+ L L+ +G+ L C V G ++L + S GGAVC+ Sbjct: 127 KHSLEAVESLNVETSIFLFSYTLKLISLLGYMPVLDSCAVCGKKENLSYFSSSCGGAVCK 186 >gi|317491020|ref|ZP_07949456.1| recombination protein O [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920567|gb|EFV41890.1| recombination protein O [Enterobacteriaceae bacterium 9_2_54FAA] Length = 242 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 21/171 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T +GR + +S R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLLLDLFTEGHGRVRLLAKGARSKRSSLKGALQPFTPLLVRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY-DM 113 + EV A+ +S L L G+ L+ R L + L+ D Sbjct: 63 K---------GEVKTLRNAEPVSLGLPLTGISLYSGLYVNELVSRVLEQETNYSSLFFDY 113 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 LN N + EL LL N+G+G+D C +G V+ D+ + Sbjct: 114 LNCLQNLAATVGSPEHTLREFELALLGNLGYGIDFLHCAGSGEPVSDDMTY 164 >gi|319935429|ref|ZP_08009866.1| hypothetical protein HMPREF9488_00697 [Coprobacillus sp. 29_1] gi|319809645|gb|EFW06058.1| hypothetical protein HMPREF9488_00697 [Coprobacillus sp. 29_1] Length = 245 Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 18/178 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-------QSHRMQPILQAGNLVRVNW 58 + IIL Y E ++IL + T++YG+ +G + G + Q ++ + + +N Sbjct: 11 EGIILKKTVYKENDMILHIYTKEYGK-IGIIARGIRKITSKNARACQEMMISE--MSINL 67 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L+ + + L L S + Y L+ +R+L + P + YD+L L Sbjct: 68 KKGLSSLMKATPVDYLRHIKENLDSEIVANYVLEY---FYRYLEDNNPNQDEYDILYHSL 124 Query: 119 NC--HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 H ++ +++ + +L + G +D+ CVV G ++ + +S + GG VC++ Sbjct: 125 KALDHGYSPLL--VYLLFNVFVLNHNGVSIDVEGCVVCGSSK-VTAISLRDGGFVCQN 179 >gi|283782940|ref|YP_003373694.1| DNA repair protein RecO [Gardnerella vaginalis 409-05] gi|298253428|ref|ZP_06977220.1| DNA repair protein RecO [Gardnerella vaginalis 5-1] gi|283442174|gb|ADB14640.1| DNA repair protein RecO [Gardnerella vaginalis 409-05] gi|297532823|gb|EFH71709.1| DNA repair protein RecO [Gardnerella vaginalis 5-1] Length = 248 Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust. Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 44/255 (17%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSH---RMQPIL-------Q 49 ++D+A++L GE + I+ ++T+++G+ VR +S R++P++ Q Sbjct: 4 YRDEAVVLRTFPLGEADRIVVLLTKRHGKVRAVAKGVRRLKSRFGGRLEPLMRVDLLLAQ 63 Query: 50 AGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE 109 +L V+ +A GE CA S L+ + L E E Sbjct: 64 GKSLDVVSQAVSIAAYAGEI--------CADYTSYEYANVMLEVVDLLVSNEYTDEYRRE 115 Query: 110 LYDMLNIFLNC---------HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 D L + HK P IG ++ L L G+ L CVV G +D Sbjct: 116 YQDTLGQYRLLTAALLSLSKHKHSPDAIGVSYI---LRALSLAGWSPRLQACVVCGKNED 172 Query: 160 LLWVSPKSGGAVCRSVGLPYAE--------KMLVLPSFLWK--EEQTIDADSLKSAFQLT 209 L + SP +GG +C S P + ++ L W + ++D+ +++ Q Sbjct: 173 LCYFSPCAGGMMCASDHTPDSIVCANSTRLQLCALAQGNWSVLDGVSVDSSTMRCVQQWA 232 Query: 210 DYFLNKYALQHNIIH 224 +Y+L + ++H Sbjct: 233 EYYLERPIRSMGLLH 247 >gi|46907688|ref|YP_014077.1| DNA repair protein RecO [Listeria monocytogenes serotype 4b str. F2365] gi|47093467|ref|ZP_00231230.1| recombination protein O [Listeria monocytogenes str. 4b H7858] gi|226224061|ref|YP_002758168.1| RecO protein [Listeria monocytogenes Clip81459] gi|254824481|ref|ZP_05229482.1| recombination protein O [Listeria monocytogenes FSL J1-194] gi|254852085|ref|ZP_05241433.1| recombination protein O [Listeria monocytogenes FSL R2-503] gi|254932645|ref|ZP_05266004.1| recombination protein O [Listeria monocytogenes HPB2262] gi|255521275|ref|ZP_05388512.1| DNA repair protein RecO [Listeria monocytogenes FSL J1-175] gi|300765603|ref|ZP_07075582.1| recombination protein O [Listeria monocytogenes FSL N1-017] gi|61215088|sp|Q71ZL0|RECO_LISMF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|259563681|sp|C1KVA7|RECO_LISMC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|46880957|gb|AAT04254.1| recombination protein O [Listeria monocytogenes serotype 4b str. F2365] gi|47018143|gb|EAL08913.1| recombination protein O [Listeria monocytogenes str. 4b H7858] gi|225876523|emb|CAS05232.1| Putative RecO protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605384|gb|EEW17992.1| recombination protein O [Listeria monocytogenes FSL R2-503] gi|293584204|gb|EFF96236.1| recombination protein O [Listeria monocytogenes HPB2262] gi|293593719|gb|EFG01480.1| recombination protein O [Listeria monocytogenes FSL J1-194] gi|300513704|gb|EFK40772.1| recombination protein O [Listeria monocytogenes FSL N1-017] gi|328465503|gb|EGF36732.1| DNA repair protein RecO [Listeria monocytogenes 1816] gi|332311901|gb|EGJ24996.1| DNA repair protein RecO [Listeria monocytogenes str. Scott A] Length = 255 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTNGYFTFFGSN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFL--- 118 LG + EV+E+ + + +F+ + V L + ER+P LY++ L Sbjct: 64 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 N P ++ +IF E+ +L +G + KC + G T S S G +C Sbjct: 122 NEGYDPQILTQIF---EMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIIC 172 >gi|306826213|ref|ZP_07459547.1| recombination protein O [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431489|gb|EFM34471.1| recombination protein O [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 256 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 40/219 (18%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ + Sbjct: 9 GLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRINDDG 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIV---------------PLFRFLPER----EPC 107 + + E ++S LF+ + V PLF FL + E Sbjct: 67 LSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELMEAG 126 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 L+ + NIF E+ +L G L+ +CV S K Sbjct: 127 LDYQVLTNIF-----------------EIQILTRFGISLNFNECVFCHRVGQAFDFSFKY 169 Query: 168 GGAVCRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 G +C + + P+ +L + Q ID D+LK+ Sbjct: 170 GACLCPEHYHEDERRCHLNPNIPYLLNQFQAIDFDTLKT 208 >gi|81428489|ref|YP_395489.1| DNA repair protein O [Lactobacillus sakei subsp. sakei 23K] gi|90103522|sp|Q38XA1|RECO_LACSS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78610131|emb|CAI55180.1| DNA repair protein O [Lactobacillus sakei subsp. sakei 23K] Length = 272 Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 18/178 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------PILQA--GNLVRVN 57 + +++ ++Y EK+++++++T ++G+ + ++R + + P QA G +R + Sbjct: 10 NGLVMYRKNYKEKDMLVKILTDRFGKKMFYLRGANKPKFRLSAAILPFTQAEYGGDIRDD 69 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS-IVPLFRF-LPEREPCLELYDMLN 115 S L +F+ +S LFL + I+ L P+ EP YD + Sbjct: 70 GLSFLNNVKSATQFQT--------ISQDLFLNAYATYILNLIDVGFPDSEPLGIWYDKVE 121 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 LN I IE+ LL+ G L C V G T S GG +C+ Sbjct: 122 QALNLIDEGFDAAMITHIIEIQLLQVFGVQPQLQGCAVCGRTDLAFDYSESYGGLLCQ 179 >gi|332975859|gb|EGK12737.1| recombination protein O [Desmospora sp. 8437] Length = 250 Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 23/195 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR------MQPILQAGNLVRV-NW 58 + +++ R YGE + ++ + T+ +G++ R + + QP L + Sbjct: 6 EGVVIRTRDYGESHKVVILFTKAHGKYAVMARGAKKPKSRLAAVTQPFTSGEYLCFTGSG 65 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI 116 + L+Q ++LES LL S L Y L + E+EP L +Y L Sbjct: 66 MATLSQG------DILESR--HLLRSDLVRASYAAYWTELLDKLKEEKEPDLPVYIWLET 117 Query: 117 FLNCHK---IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 LN + P ++ +IF EL +L++ G+ L CV G + S + GG +C Sbjct: 118 VLNLLEEGVDPEILSRIF---ELKVLESAGYRPRLQGCVQCGGADTPVKFSIRQGGFLCS 174 Query: 174 SVGLPYAEKMLVLPS 188 E + + P+ Sbjct: 175 GCSHRDPEALFLSPA 189 >gi|51597204|ref|YP_071395.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 32953] gi|108808448|ref|YP_652364.1| DNA repair protein RecO [Yersinia pestis Antiqua] gi|108811371|ref|YP_647138.1| DNA repair protein RecO [Yersinia pestis Nepal516] gi|145598835|ref|YP_001162911.1| DNA repair protein RecO [Yersinia pestis Pestoides F] gi|149365388|ref|ZP_01887423.1| DNA repair protein [Yersinia pestis CA88-4125] gi|153948747|ref|YP_001400119.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 31758] gi|161484839|ref|NP_668622.2| DNA repair protein RecO [Yersinia pestis KIM 10] gi|161511351|ref|NP_993845.2| DNA repair protein RecO [Yersinia pestis biovar Microtus str. 91001] gi|162420369|ref|YP_001607937.1| DNA repair protein RecO [Yersinia pestis Angola] gi|165925301|ref|ZP_02221133.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. F1991016] gi|165937188|ref|ZP_02225753.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. IP275] gi|166008243|ref|ZP_02229141.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. E1979001] gi|166212406|ref|ZP_02238441.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. B42003004] gi|167399560|ref|ZP_02305084.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421237|ref|ZP_02312990.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423802|ref|ZP_02315555.1| DNA repair protein RecO [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467392|ref|ZP_02332096.1| DNA repair protein RecO [Yersinia pestis FV-1] gi|170023437|ref|YP_001719942.1| DNA repair protein RecO [Yersinia pseudotuberculosis YPIII] gi|186896301|ref|YP_001873413.1| DNA repair protein RecO [Yersinia pseudotuberculosis PB1/+] gi|218929792|ref|YP_002347667.1| DNA repair protein RecO [Yersinia pestis CO92] gi|229838283|ref|ZP_04458442.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895521|ref|ZP_04510692.1| gap repair protein [Yersinia pestis Pestoides A] gi|229898847|ref|ZP_04513992.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901621|ref|ZP_04516743.1| gap repair protein [Yersinia pestis Nepal516] gi|270489810|ref|ZP_06206884.1| DNA repair protein RecO [Yersinia pestis KIM D27] gi|294504511|ref|YP_003568573.1| DNA repair protein RecO [Yersinia pestis Z176003] gi|20139503|sp|Q8ZD70|RECO_YERPE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61214871|sp|Q667V3|RECO_YERPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361499|sp|Q1C553|RECO_YERPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361500|sp|Q1CKE2|RECO_YERPN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221917|sp|A4TKX6|RECO_YERPP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166918733|sp|A7FFU1|RECO_YERP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238687296|sp|A9R404|RECO_YERPG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238688564|sp|B1JRC9|RECO_YERPY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691450|sp|B2KA45|RECO_YERPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|51590486|emb|CAH22126.1| DNA repair protein [Yersinia pseudotuberculosis IP 32953] gi|108775019|gb|ABG17538.1| DNA replication and repair protein RecO [Yersinia pestis Nepal516] gi|108780361|gb|ABG14419.1| DNA replication and repair protein RecO [Yersinia pestis Antiqua] gi|115348403|emb|CAL21339.1| DNA repair protein [Yersinia pestis CO92] gi|145210531|gb|ABP39938.1| DNA replication and repair protein RecO [Yersinia pestis Pestoides F] gi|149291801|gb|EDM41875.1| DNA repair protein [Yersinia pestis CA88-4125] gi|152960242|gb|ABS47703.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 31758] gi|162353184|gb|ABX87132.1| DNA repair protein RecO [Yersinia pestis Angola] gi|165915051|gb|EDR33663.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. IP275] gi|165922908|gb|EDR40059.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. F1991016] gi|165992625|gb|EDR44926.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. E1979001] gi|166206337|gb|EDR50817.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. B42003004] gi|166960726|gb|EDR56747.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052064|gb|EDR63472.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057972|gb|EDR67718.1| DNA repair protein RecO [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749971|gb|ACA67489.1| DNA repair protein RecO [Yersinia pseudotuberculosis YPIII] gi|186699327|gb|ACC89956.1| DNA repair protein RecO [Yersinia pseudotuberculosis PB1/+] gi|229681550|gb|EEO77644.1| gap repair protein [Yersinia pestis Nepal516] gi|229688395|gb|EEO80466.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694649|gb|EEO84696.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701327|gb|EEO89355.1| gap repair protein [Yersinia pestis Pestoides A] gi|262362497|gb|ACY59218.1| DNA repair protein RecO [Yersinia pestis D106004] gi|262366498|gb|ACY63055.1| DNA repair protein RecO [Yersinia pestis D182038] gi|270338314|gb|EFA49091.1| DNA repair protein RecO [Yersinia pestis KIM D27] gi|294354970|gb|ADE65311.1| DNA repair protein RecO [Yersinia pestis Z176003] gi|320016073|gb|ADV99644.1| gap repair protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 241 Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 25/226 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 R GE + L S A LS S+ GL L R L + L+ D L+ Sbjct: 63 R-----GEVK--TLRSAEPVSLALPLSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLH 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 Q EL +L N+G+G+D C +G V+ + + + G + Sbjct: 116 CLQALAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIAS 175 Query: 174 SVGLPYA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ ++L L + DAD+L++A + T L Y Sbjct: 176 LVVDHYSFTGRQLLAL-----ANREFPDADTLRAAKRFTRIALKPY 216 >gi|257893052|ref|ZP_05672705.1| recombination protein O [Enterococcus faecium 1,231,408] gi|260559559|ref|ZP_05831739.1| recombination protein O [Enterococcus faecium C68] gi|293559429|ref|ZP_06675968.1| DNA repair protein RecO [Enterococcus faecium E1162] gi|314939539|ref|ZP_07846767.1| DNA repair protein RecO [Enterococcus faecium TX0133a04] gi|314942706|ref|ZP_07849532.1| DNA repair protein RecO [Enterococcus faecium TX0133C] gi|314948956|ref|ZP_07852322.1| DNA repair protein RecO [Enterococcus faecium TX0082] gi|314953303|ref|ZP_07856231.1| DNA repair protein RecO [Enterococcus faecium TX0133A] gi|314993383|ref|ZP_07858748.1| DNA repair protein RecO [Enterococcus faecium TX0133B] gi|314995733|ref|ZP_07860822.1| DNA repair protein RecO [Enterococcus faecium TX0133a01] gi|257829431|gb|EEV56038.1| recombination protein O [Enterococcus faecium 1,231,408] gi|260074227|gb|EEW62549.1| recombination protein O [Enterococcus faecium C68] gi|291606643|gb|EFF36038.1| DNA repair protein RecO [Enterococcus faecium E1162] gi|313590005|gb|EFR68850.1| DNA repair protein RecO [Enterococcus faecium TX0133a01] gi|313592048|gb|EFR70893.1| DNA repair protein RecO [Enterococcus faecium TX0133B] gi|313594646|gb|EFR73491.1| DNA repair protein RecO [Enterococcus faecium TX0133A] gi|313598571|gb|EFR77416.1| DNA repair protein RecO [Enterococcus faecium TX0133C] gi|313641175|gb|EFS05755.1| DNA repair protein RecO [Enterococcus faecium TX0133a04] gi|313644615|gb|EFS09195.1| DNA repair protein RecO [Enterococcus faecium TX0082] Length = 270 Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 42/192 (21%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +IL R+Y EK+ ++++ T G+ + +++ G + QP+ A L+ A Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIK-GIHRQNQPLAPA--LLPFT----EA 58 Query: 64 QNLGEFRFE-------VLESHCAKLLSSSLFLYGL---------------QSIVPLFRFL 101 +G FR E V + H + + +FL G Q LF+F Sbjct: 59 VYIGNFRSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFT 118 Query: 102 PEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + ++ D I N IF E+ +L+ G T CVV G T+ Sbjct: 119 QQALQRMDQGDDAEIITN----------IF---EVQILQRFGIAPIWTHCVVCGETKGKF 165 Query: 162 WVSPKSGGAVCR 173 S KSGG +C Sbjct: 166 DYSSKSGGVICE 177 >gi|86359369|ref|YP_471261.1| glutamyl-Q tRNA(Asp) synthetase [Rhizobium etli CFN 42] gi|86283471|gb|ABC92534.1| glutamyl-tRNA synthetase protein [Rhizobium etli CFN 42] Length = 293 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 21/111 (18%) Query: 96 PLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV-- 153 P+FRF P L L L+ FLNC + G++ ++IE +D T+C Sbjct: 9 PVFRFAPSPNGPLHLGHALSAFLNCDMADAWNGRVLLRIE---------DIDQTRCTPEF 59 Query: 154 -TGVTQDLLWVSPKSGGAVCR-SVGLPY--------AEKMLVLPSFLWKEE 194 G+ +DL W++ V R S P E+ LV P+FL + E Sbjct: 60 EAGILRDLDWLAIDWESPVRRQSEHFPEYQAALHALIERGLVYPAFLTRGE 110 >gi|291618444|ref|YP_003521186.1| RecO [Pantoea ananatis LMG 20103] gi|291153474|gb|ADD78058.1| RecO [Pantoea ananatis LMG 20103] gi|327394840|dbj|BAK12262.1| DNA repair protein RecO [Pantoea ananatis AJ13355] Length = 245 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 27/227 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + GR + +S R Q LQ + V W Sbjct: 4 WQR-AFVLHSRPFSETSLLLDLFSESEGRVRVLAKGARSRRSQLKGTLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELY-DMLNIF 117 R GE + E+ L S + LY GL L R L + P EL+ D L Sbjct: 63 R-----GEVKTLRNAEAVSLALPLSGITLYCGLYVNELLSRVLEQHIPFSELFFDYLQCI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 + EL LL ++G+G+D C +G V++ + + + G + Sbjct: 118 QMLAAGEGSPEPALRRFELALLGHLGYGVDFLHCAGSGEPVSEAMTYSYREEKGFI---- 173 Query: 176 GLPYAEKMLVLPSFLWKEEQTI------DADSLKSAFQLTDYFLNKY 216 A +L SF +E Q + DA++L++A + T L Y Sbjct: 174 ----ASLVLNQRSFTGRELQALFTREFPDAETLRAAKRFTRMALKPY 216 >gi|261491681|ref|ZP_05988262.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494444|ref|ZP_05990930.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309828|gb|EEY11045.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312634|gb|EEY13756.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 240 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 18/165 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E ++++E T +GR + + R ++ +LQ + V W Sbjct: 6 WQR-AFVLHRREYSESSLLVEFFTEHHGRITLLAKGARRARSPLKAVLQPFTPLLVRWSG 64 Query: 61 RLAQNLGEFRFEVLESHCAKL---LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + G+ + + ++ A L + ++ G L R L + EL+ + Sbjct: 65 K-----GDLK-TLTKAEPAALTLPMETAALYSGFYINEVLARVLENQTAYPELFQH---Y 115 Query: 118 LNCHK---IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 L C I I E LK +G+G+D T C TG+ D Sbjct: 116 LRCMTELATQHQIEPILRTFEFHTLKALGYGVDFTHCTATGLPID 160 >gi|254360746|ref|ZP_04976894.1| DNA recombination protein RecO [Mannheimia haemolytica PHL213] gi|153091316|gb|EDN73290.1| DNA recombination protein RecO [Mannheimia haemolytica PHL213] Length = 240 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E ++++E T +GR + + R ++ +LQ + + W Sbjct: 6 WQR-AFVLHRREYSENSLLVEFFTEHHGRITLLAKGARRARSPLKAVLQPFTPLLLRWSG 64 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + G+ + E L +L LY G L R L + EL+ +L Sbjct: 65 K-----GDLKTLTKAEPAALTLPMETLSLYSGFYINEVLARVLENQTAYPELFQH---YL 116 Query: 119 NC---HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 C I I E LK +G+G+D T C TG+ D Sbjct: 117 RCITELATQKQIEPILRTFEFHTLKALGYGVDFTHCAATGLPVD 160 >gi|21958064|gb|AAM84873.1|AE013732_5 recO protein [Yersinia pestis KIM 10] gi|45437170|gb|AAS62722.1| DNA repair protein [Yersinia pestis biovar Microtus str. 91001] Length = 243 Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 25/226 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 6 WQR-AFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 64 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 R GE + L S A LS S+ GL L R L + L+ D L+ Sbjct: 65 R-----GEVK--TLRSAEPVSLALPLSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLH 117 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 Q EL +L N+G+G+D C +G V+ + + + G + Sbjct: 118 CLQALAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIAS 177 Query: 174 SVGLPYA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ ++L L + DAD+L++A + T L Y Sbjct: 178 LVVDHYSFTGRQLLAL-----ANREFPDADTLRAAKRFTRIALKPY 218 >gi|307287712|ref|ZP_07567755.1| DNA repair protein RecO [Enterococcus faecalis TX0109] gi|306501450|gb|EFM70753.1| DNA repair protein RecO [Enterococcus faecalis TX0109] gi|315164811|gb|EFU08828.1| DNA repair protein RecO [Enterococcus faecalis TX1302] Length = 262 Score = 39.3 bits (90), Expect = 0.42, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ +HR L L A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKG--AHRKNNPLMPAILPFTE-----AVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI- 116 G FR E L E + + +F+ YG + + + ++ L+ ++ Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 117 --FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|313637816|gb|EFS03157.1| DNA repair protein RecO [Listeria seeligeri FSL S4-171] Length = 255 Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTSGYFTFFGGN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +IF E+ +L +G + KC + G T S +S G +C Sbjct: 122 DEGYDPQILTQIF---EMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIIC 172 >gi|256617034|ref|ZP_05473880.1| recombination protein O [Enterococcus faecalis ATCC 4200] gi|256853770|ref|ZP_05559135.1| DNA repair protein recO [Enterococcus faecalis T8] gi|307277157|ref|ZP_07558261.1| DNA repair protein RecO [Enterococcus faecalis TX2134] gi|307290539|ref|ZP_07570451.1| DNA repair protein RecO [Enterococcus faecalis TX0411] gi|256596561|gb|EEU15737.1| recombination protein O [Enterococcus faecalis ATCC 4200] gi|256710713|gb|EEU25756.1| DNA repair protein recO [Enterococcus faecalis T8] gi|295113463|emb|CBL32100.1| DNA repair protein RecO [Enterococcus sp. 7L76] gi|306498394|gb|EFM67899.1| DNA repair protein RecO [Enterococcus faecalis TX0411] gi|306506087|gb|EFM75253.1| DNA repair protein RecO [Enterococcus faecalis TX2134] gi|315030212|gb|EFT42144.1| DNA repair protein RecO [Enterococcus faecalis TX4000] Length = 261 Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ G + P+L A ++ A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVK-GAHRKNNPLLPA--ILPFT----EAVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI- 116 G FR E L E + + +F+ YG + + + ++ L+ ++ Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 117 --FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|29376904|ref|NP_816058.1| DNA repair protein RecO, putative [Enterococcus faecalis V583] gi|227553940|ref|ZP_03983987.1| recombination protein O [Enterococcus faecalis HH22] gi|255975190|ref|ZP_05425776.1| recombination protein O [Enterococcus faecalis T2] gi|256763102|ref|ZP_05503682.1| recombination protein O [Enterococcus faecalis T3] gi|256956686|ref|ZP_05560857.1| recombination protein O [Enterococcus faecalis DS5] gi|300861009|ref|ZP_07107096.1| DNA repair protein RecO [Enterococcus faecalis TUSoD Ef11] gi|307285809|ref|ZP_07565943.1| DNA repair protein RecO [Enterococcus faecalis TX0860] gi|42559464|sp|Q831U0|RECO_ENTFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|29344369|gb|AAO82128.1| DNA repair protein RecO, putative [Enterococcus faecalis V583] gi|227176926|gb|EEI57898.1| recombination protein O [Enterococcus faecalis HH22] gi|255968062|gb|EET98684.1| recombination protein O [Enterococcus faecalis T2] gi|256684353|gb|EEU24048.1| recombination protein O [Enterococcus faecalis T3] gi|256947182|gb|EEU63814.1| recombination protein O [Enterococcus faecalis DS5] gi|300850048|gb|EFK77798.1| DNA repair protein RecO [Enterococcus faecalis TUSoD Ef11] gi|306502570|gb|EFM71837.1| DNA repair protein RecO [Enterococcus faecalis TX0860] gi|315035614|gb|EFT47546.1| DNA repair protein RecO [Enterococcus faecalis TX0027] gi|315146684|gb|EFT90700.1| DNA repair protein RecO [Enterococcus faecalis TX4244] gi|315166397|gb|EFU10414.1| DNA repair protein RecO [Enterococcus faecalis TX1341] gi|315170293|gb|EFU14310.1| DNA repair protein RecO [Enterococcus faecalis TX1342] gi|315574359|gb|EFU86550.1| DNA repair protein RecO [Enterococcus faecalis TX0309B] gi|315580166|gb|EFU92357.1| DNA repair protein RecO [Enterococcus faecalis TX0309A] gi|327535694|gb|AEA94528.1| recombination protein O [Enterococcus faecalis OG1RF] Length = 262 Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ G + P+L A ++ A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVK-GAHRKNNPLLPA--ILPFT----EAVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI- 116 G FR E L E + + +F+ YG + + + ++ L+ ++ Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 117 --FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|229545170|ref|ZP_04433895.1| recombination protein O [Enterococcus faecalis TX1322] gi|229549419|ref|ZP_04438144.1| recombination protein O [Enterococcus faecalis ATCC 29200] gi|255972123|ref|ZP_05422709.1| recombination protein O [Enterococcus faecalis T1] gi|256963576|ref|ZP_05567747.1| recombination protein O [Enterococcus faecalis HIP11704] gi|257079641|ref|ZP_05574002.1| recombination protein O [Enterococcus faecalis JH1] gi|257090599|ref|ZP_05584960.1| recombination protein recO [Enterococcus faecalis CH188] gi|257416647|ref|ZP_05593641.1| recombination protein O [Enterococcus faecalis AR01/DG] gi|257421949|ref|ZP_05598939.1| DNA repair protein recO [Enterococcus faecalis X98] gi|294780921|ref|ZP_06746275.1| DNA repair protein RecO [Enterococcus faecalis PC1.1] gi|307270834|ref|ZP_07552122.1| DNA repair protein RecO [Enterococcus faecalis TX4248] gi|307271515|ref|ZP_07552787.1| DNA repair protein RecO [Enterococcus faecalis TX0855] gi|312899838|ref|ZP_07759157.1| DNA repair protein RecO [Enterococcus faecalis TX0470] gi|312905131|ref|ZP_07764252.1| DNA repair protein RecO [Enterococcus faecalis TX0635] gi|312953488|ref|ZP_07772328.1| DNA repair protein RecO [Enterococcus faecalis TX0102] gi|229305656|gb|EEN71652.1| recombination protein O [Enterococcus faecalis ATCC 29200] gi|229309715|gb|EEN75702.1| recombination protein O [Enterococcus faecalis TX1322] gi|255963141|gb|EET95617.1| recombination protein O [Enterococcus faecalis T1] gi|256954072|gb|EEU70704.1| recombination protein O [Enterococcus faecalis HIP11704] gi|256987671|gb|EEU74973.1| recombination protein O [Enterococcus faecalis JH1] gi|256999411|gb|EEU85931.1| recombination protein recO [Enterococcus faecalis CH188] gi|257158475|gb|EEU88435.1| recombination protein O [Enterococcus faecalis ARO1/DG] gi|257163773|gb|EEU93733.1| DNA repair protein recO [Enterococcus faecalis X98] gi|294452047|gb|EFG20495.1| DNA repair protein RecO [Enterococcus faecalis PC1.1] gi|306511787|gb|EFM80785.1| DNA repair protein RecO [Enterococcus faecalis TX0855] gi|306512835|gb|EFM81479.1| DNA repair protein RecO [Enterococcus faecalis TX4248] gi|310628697|gb|EFQ11980.1| DNA repair protein RecO [Enterococcus faecalis TX0102] gi|310631521|gb|EFQ14804.1| DNA repair protein RecO [Enterococcus faecalis TX0635] gi|311293088|gb|EFQ71644.1| DNA repair protein RecO [Enterococcus faecalis TX0470] gi|315152155|gb|EFT96171.1| DNA repair protein RecO [Enterococcus faecalis TX0031] gi|315155342|gb|EFT99358.1| DNA repair protein RecO [Enterococcus faecalis TX0043] gi|315159082|gb|EFU03099.1| DNA repair protein RecO [Enterococcus faecalis TX0312] gi|315579041|gb|EFU91232.1| DNA repair protein RecO [Enterococcus faecalis TX0630] gi|323481398|gb|ADX80837.1| DNA repair protein RecO [Enterococcus faecalis 62] gi|329572236|gb|EGG53896.1| DNA repair protein RecO [Enterococcus faecalis TX1467] Length = 262 Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ G + P+L A ++ A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVK-GAHRKNNPLLPA--ILPFT----EAVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI- 116 G FR E L E + + +F+ YG + + + ++ L+ ++ Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 117 --FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|315150152|gb|EFT94168.1| DNA repair protein RecO [Enterococcus faecalis TX0012] Length = 264 Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ +HR L L A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKG--AHRKNNPLMPAILPFTE-----AVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI- 116 G FR E L E + + +F+ YG + + + ++ L+ ++ Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 117 --FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|289434742|ref|YP_003464614.1| recombination protein O [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170986|emb|CBH27528.1| recombination protein O [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 255 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTSGYFTFFGGN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +IF E+ +L +G + KC + G T S +S G +C Sbjct: 122 DEGYDPQILTQIF---EMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIIC 172 >gi|256961297|ref|ZP_05565468.1| recombination protein O [Enterococcus faecalis Merz96] gi|293383581|ref|ZP_06629491.1| DNA repair protein RecO [Enterococcus faecalis R712] gi|293387306|ref|ZP_06631862.1| DNA repair protein RecO [Enterococcus faecalis S613] gi|312906131|ref|ZP_07765143.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 512] gi|312909477|ref|ZP_07768332.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 516] gi|256951793|gb|EEU68425.1| recombination protein O [Enterococcus faecalis Merz96] gi|291079093|gb|EFE16457.1| DNA repair protein RecO [Enterococcus faecalis R712] gi|291083204|gb|EFE20167.1| DNA repair protein RecO [Enterococcus faecalis S613] gi|310627777|gb|EFQ11060.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 512] gi|311290150|gb|EFQ68706.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 516] Length = 264 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ G + P+L A ++ A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVK-GAHRKNNPLLPA--ILPFT----EAVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI- 116 G FR E L E + + +F+ YG + + + ++ L+ ++ Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 117 --FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|288555747|ref|YP_003427682.1| DNA repair protein RecO [Bacillus pseudofirmus OF4] gi|288546907|gb|ADC50790.1| DNA repair protein RecO [Bacillus pseudofirmus OF4] Length = 251 Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 11/174 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +AI++ YGE N I+ + TR+ G+ R + + + + + + + + Sbjct: 5 EAIVIRTNDYGESNKIVTLFTRESGKVGVMARGAKKPKSRLAAISQLFIHGLYLFQKSNG 64 Query: 66 LGEF-RFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLN---IFLN 119 LG + E++ H K + + LFL Y + + + E++P L+ +L ++L+ Sbjct: 65 LGTLNQAEMI--HSYKEVRNDLFLASYATYVVELIDKLTEEKQPNEPLFHLLQQTLLYLD 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 P V+ +IF E+ +++ G +L +C G T+ S K G +C+ Sbjct: 123 EGIDPEVLLRIF---EMKMMQVAGITPELDQCTNCGSTEVPSGFSIKEAGFLCK 173 >gi|260583652|ref|ZP_05851400.1| DNA repair protein RecO [Granulicatella elegans ATCC 700633] gi|260158278|gb|EEW93346.1| DNA repair protein RecO [Granulicatella elegans ATCC 700633] Length = 267 Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 24/179 (13%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNL--VRVNWRSRLAQ 64 I+L + Y E ++I+++ +R++G+ + FVRN Q R L A L R + + Q Sbjct: 9 GIVLFRQEYKEHDMIVKIFSREFGKQMFFVRNLQ--RSSHPLSAATLPFTRAVFIGTIHQ 66 Query: 65 NLGEFRFEVLESHCAKLLSS-----SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 N F E LE + + ++ Y +Q + + + +R ELYD+L N Sbjct: 67 NGFSFIRECLEVQNHRRIYEQIEVQAVMTYMMQLVDAV---MEDRIVNTELYDLLE---N 120 Query: 120 CHKI------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 C + P ++ F EL +LK G +C + +S K G +C Sbjct: 121 CIRAVENDLDPFILMHYF---ELKMLKYFGVAFQWQQCCFCEESVGPFDISLKHHGLLC 176 >gi|257082013|ref|ZP_05576374.1| recombination protein O [Enterococcus faecalis E1Sol] gi|257084564|ref|ZP_05578925.1| recombination protein O [Enterococcus faecalis Fly1] gi|257087440|ref|ZP_05581801.1| recombination protein O [Enterococcus faecalis D6] gi|256990043|gb|EEU77345.1| recombination protein O [Enterococcus faecalis E1Sol] gi|256992594|gb|EEU79896.1| recombination protein O [Enterococcus faecalis Fly1] gi|256995470|gb|EEU82772.1| recombination protein O [Enterococcus faecalis D6] gi|315025404|gb|EFT37336.1| DNA repair protein RecO [Enterococcus faecalis TX2137] gi|315161674|gb|EFU05691.1| DNA repair protein RecO [Enterococcus faecalis TX0645] gi|315173672|gb|EFU17689.1| DNA repair protein RecO [Enterococcus faecalis TX1346] Length = 264 Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ G + P+L A ++ A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVK-GAHRKNNPLLPA--ILPFT----EAVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI- 116 G FR E L E + + +F+ YG + + + ++ L+ ++ Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 117 --FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|259907679|ref|YP_002648035.1| DNA repair protein RecO [Erwinia pyrifoliae Ep1/96] gi|224963301|emb|CAX54786.1| DNA repair protein RecO [Erwinia pyrifoliae Ep1/96] gi|283477530|emb|CAY73446.1| DNA repair protein recO (Recombination protein O) [Erwinia pyrifoliae DSM 12163] Length = 245 Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 15/235 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + Q+GR + +S R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARSKRSSLKGALQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELY-DMLNIF 117 R GE + E L S LY GL L R L EL+ D L Sbjct: 63 R-----GEVKTLRAAEPVSLALPLSGNTLYCGLYVNELLSRVLQHETAFSELFFDYLQCI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 P+ + EL +L ++G+G+D C +G V + + + G + V Sbjct: 118 QTLAADPASPEPALRRFELSMLGHLGYGVDFLHCAGSGEEVADSMTYSYREEKGFIASLV 177 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 + L + +E DAD+L++A + T L Y + L R+ Sbjct: 178 AGHRSFSGRQLRALSARE--FPDADTLRAAKRFTRIALKPYLGGKPLKSGELFRQ 230 >gi|310764813|gb|ADP09763.1| DNA repair protein RecO [Erwinia sp. Ejp617] Length = 245 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 15/221 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + Q+GR + +S R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARSKRSSLKGALQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELY-DMLNIF 117 R GE + E L S LY GL L R L EL+ D L Sbjct: 63 R-----GEVKTLRAAEPVSLALPLSGNTLYCGLYVNELLSRVLQHETAFSELFFDYLQCI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 P+ + EL +L ++G+G+D C +G V + + + G + V Sbjct: 118 QTLAADPASPEPALRRFELSMLGHLGYGVDFLHCAGSGEEVADSMTYSYREEKGFIASLV 177 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 + L + +E DAD+L++A + T L Y Sbjct: 178 AGHRSFSGRQLRALSARE--FPDADTLRAAKRFTRIALKPY 216 >gi|190575412|ref|YP_001973257.1| DNA repair protein RecO [Stenotrophomonas maltophilia K279a] gi|229485574|sp|B2FPX7|RECO_STRMK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190013334|emb|CAQ46968.1| putative DNA repair protein RecO [Stenotrophomonas maltophilia K279a] Length = 239 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 14/158 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M D +L R+Y E ++++EV++ Q+GR +G + G S +L+A L + W Sbjct: 2 MIEDDTGFVLHARAYRETSLLVEVLSAQHGR-VGLLARGVSTAKGQVLRAA-LQPLQWIR 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-------RFLPEREPCLELYDM 113 AQ G E+ + A+ L ++ L G Q+++ F R P ++P ELY Sbjct: 60 FSAQQRG----ELAQLRGAEALDAAPRLVG-QAMLAGFYLSELTLRLAPRQDPLPELYLA 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + + + + E LL +G G +L Sbjct: 115 YGEARARLAVGAGLAWTLRRFERELLTALGLGFELDSA 152 >gi|294637609|ref|ZP_06715889.1| DNA repair protein RecO [Edwardsiella tarda ATCC 23685] gi|291089239|gb|EFE21800.1| DNA repair protein RecO [Edwardsiella tarda ATCC 23685] Length = 243 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 11/158 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + +S R Q LQ + + W Sbjct: 5 WQR-AFVLHARPYSETSLLLDTFTEGQGRVRLLAKGARSRRSQLKGALQPFTPLLIRWGG 63 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE--LYDMLNIF 117 + GE + E+ L S + LY + L + E+E C +D L+ Sbjct: 64 K-----GEVKTLRSAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYSALFFDYLHCI 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + EL LL +G+G+D C +G Sbjct: 119 QQLAGHSGSPEPVLRRFELALLAQLGYGIDFLHCAGSG 156 >gi|257419863|ref|ZP_05596857.1| recombination protein recO [Enterococcus faecalis T11] gi|257161691|gb|EEU91651.1| recombination protein recO [Enterococcus faecalis T11] Length = 262 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ G + P+L A ++ A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTEAYGKLMFFVK-GAHRKNNPLLPA--ILPFT----EAVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI- 116 G FR E L E + + +F+ YG + + + ++ L+ ++ Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 117 --FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|311114387|ref|YP_003985608.1| recombination protein O [Gardnerella vaginalis ATCC 14019] gi|310945881|gb|ADP38585.1| recombination protein O [Gardnerella vaginalis ATCC 14019] Length = 247 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 41/256 (16%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSH---RMQPILQAGNLVRV 56 + D+A++L GE + I+ ++T+++G+ VR +S R++P + RV Sbjct: 7 YNDEAVVLKTFPLGEADRIVVMLTKKHGKIRAVAKGVRKIKSRFGARLEPFM------RV 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLEL 110 N + VL S A+ + + LY S++ + ++ C++ Sbjct: 61 NALFATGRTFDVVSQAVLVSAYAESICADYDLYSRASMIAEIADDLVSSSAQYQDSCMQ- 119 Query: 111 YDMLNIFLNC-----HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 Y++L L+ H S IG +V L LK G+ L +CVV DL + S Sbjct: 120 YNLLVAALSALSRGLHSADS-IGFSYV---LRALKLAGWSPMLNECVVCATKDDLSYFSS 175 Query: 166 KSGGAVC---------RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 SGG +C + GL + M+ L + WK D D L ++ + + +Y Sbjct: 176 CSGGVMCSKDHDLQSIKCNGLARFQ-MISLINGDWKNIDGTDIDYL--TYRCVEQWC-EY 231 Query: 217 ALQHNIIHCHLLRENF 232 L+ I HLL N Sbjct: 232 YLERPIKSMHLLENNM 247 >gi|270265298|ref|ZP_06193559.1| hypothetical protein SOD_m00300 [Serratia odorifera 4Rx13] gi|270040702|gb|EFA13805.1| hypothetical protein SOD_m00300 [Serratia odorifera 4Rx13] Length = 243 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 14/219 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRL 62 + A +L R Y E +++L++ T +GR + +S R ++ LQ + V W R Sbjct: 5 ERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRWGGR- 63 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDMLNIFLN 119 GE + E+ L S + LY + L + E+E + +D L Sbjct: 64 ----GEVKTLRNAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQA 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVGL 177 + Q EL LL ++G+GLD C +G V + + + G + V Sbjct: 120 LAAEDISPEQALRQFELALLNHLGYGLDFLHCAGSGQPVDDGMTYRYREEKGFIASLVVD 179 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 Y+ L + E Q DA +L++A + T L Y Sbjct: 180 HYSFTGRELRAL--AERQFPDAQTLRAAKRFTRMALKPY 216 >gi|225848520|ref|YP_002728683.1| hypothetical protein SULAZ_0698 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643278|gb|ACN98328.1| hypothetical protein SULAZ_0698 [Sulfurihydrogenibium azorense Az-Fu1] Length = 198 Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 ++D AI+L GEK++ L V T++ GR F++NGQ + P++ +L NW S Sbjct: 5 FKDQAIVLKRTFVGEKDLSLVVYTKKLGRESIFIQNGQLIKNLPVV---SLTEFNWFS 59 >gi|306828474|ref|ZP_07461669.1| recombination protein O [Streptococcus mitis ATCC 6249] gi|304429273|gb|EFM32358.1| recombination protein O [Streptococcus mitis ATCC 6249] Length = 256 Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust. Identities = 45/219 (20%), Positives = 89/219 (40%), Gaps = 40/219 (18%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ + Sbjct: 9 GLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRINDDG 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIV---------------PLFRFLPER----EPC 107 + + E ++S LF+ + V PLF FL + E Sbjct: 67 LSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLELMEEG 126 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 L+ + NIF E+ +L G GL+ +CV S K Sbjct: 127 LDYQVLTNIF-----------------EIQILNRFGIGLNFNECVFCHRVGQAFDFSFKY 169 Query: 168 GGAVCRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 G +C ++ + P+ +L + Q ID ++L++ Sbjct: 170 GACLCPDHYHEDEKRCHLNPNIPYLLNQFQAIDFETLET 208 >gi|308234875|ref|ZP_07665612.1| DNA repair protein RecO [Gardnerella vaginalis ATCC 14018] Length = 244 Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 41/256 (16%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSH---RMQPILQAGNLVRV 56 + D+A++L GE + I+ ++T+++G+ VR +S R++P + RV Sbjct: 4 YNDEAVVLKTFPLGEADRIVVMLTKKHGKIRAVAKGVRKIKSRFGARLEPFM------RV 57 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLEL 110 N + VL S A+ + + LY S++ + ++ C++ Sbjct: 58 NALFATGRTFDVVSQAVLVSAYAESICADYDLYSRASMIAEIADDLVSSSAQYQDSCMQ- 116 Query: 111 YDMLNIFLNC-----HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 Y++L L+ H S IG +V L LK G+ L +CVV DL + S Sbjct: 117 YNLLVAALSALSRGLHSADS-IGFSYV---LRALKLAGWSPMLNECVVCATKDDLSYFSS 172 Query: 166 KSGGAVC---------RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 SGG +C + GL + M+ L + WK D D L ++ + + +Y Sbjct: 173 CSGGVMCSKDHDLQSIKCNGLARFQ-MISLINGDWKNIDGTDIDYL--TYRCVEQWC-EY 228 Query: 217 ALQHNIIHCHLLRENF 232 L+ I HLL N Sbjct: 229 YLERPIKSMHLLENNM 244 >gi|322834125|ref|YP_004214152.1| DNA repair protein RecO [Rahnella sp. Y9602] gi|321169326|gb|ADW75025.1| DNA repair protein RecO [Rahnella sp. Y9602] Length = 245 Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 11/158 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGQGRVRILAKGARGRRSNLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE--LYDMLNIF 117 R GE + E L S L LY + L + E+E +D LN Sbjct: 63 R-----GEVKTLRNAEPVSLALPLSGLMLYSGLYVNELVSRVLEQEANYSSLFFDYLNCL 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 N Q EL LL ++G+G+D C +G Sbjct: 118 QNLASASGSPEYALRQFELSLLHHLGYGVDFLHCAGSG 155 >gi|188533140|ref|YP_001906937.1| DNA repair protein RecO [Erwinia tasmaniensis Et1/99] gi|238691986|sp|B2VI48|RECO_ERWT9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|188028182|emb|CAO96040.1| DNA repair protein RecO [Erwinia tasmaniensis Et1/99] Length = 245 Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + Q+GR + ++ R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARAKRSSLKGALQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY-DM 113 R EV A+ +S +L L G L+ R L EL+ D Sbjct: 63 R---------GEVKTLRSAEPVSLALPLSGTTLYCGLYVNELLSRVLQHETAFSELFFDY 113 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 LN P + EL +L ++G+G+D C +G Sbjct: 114 LNCIQTLAADPPSPEPALRRFELSMLGHLGYGVDFLHCAGSG 155 >gi|108760610|ref|YP_631289.1| DNA repair protein RecO [Myxococcus xanthus DK 1622] gi|119361467|sp|Q1D7T4|RECO_MYXXD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|108464490|gb|ABF89675.1| DNA repair protein RecO [Myxococcus xanthus DK 1622] Length = 244 Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 3/186 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 + DDA++L YGE + ++ ++TR++G+ F + R L+ +RV+ Sbjct: 4 YDDDALVLSSVDYGESDRLVTLLTREHGKLTAFAAGARKSKRRFAGALEPFMRLRVHIVE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +++ A SL L ++ + EP EL+ +L +L Sbjct: 64 TRGSTVRLDGTDIVAGFYAAREDLSLIARALYAVELCRELTRDHEPQPELFALLESYLTR 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKC-VVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL L + G C + G + GGAVC G+ Sbjct: 124 LDAKEAGPTSLLAFELSALAHAGLMPRFDSCSLCGGAPGERPRFDQAHGGAVCEPCGVRA 183 Query: 180 AEKMLV 185 E + V Sbjct: 184 RESVAV 189 >gi|320548079|ref|ZP_08042359.1| recombination protein O [Streptococcus equinus ATCC 9812] gi|320447321|gb|EFW88084.1| recombination protein O [Streptococcus equinus ATCC 9812] Length = 251 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 36/182 (19%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRVNWRSRL 62 ++L R+Y E + ++++ T G+H+ FVR+ R +QP+ A +V++N Sbjct: 8 GLVLYNRNYREDDKLVKIFTETDGKHMFFVRHAGKSRFNSVIQPLTIAKFIVKIN----- 62 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF--RFLPEREPCLELYDMLNIFLNC 120 N F + E K +++ LF S V +P+ +L+ LN L+ Sbjct: 63 -DNGLSFIEDYKEVASFKEINADLFKLSYASYVTSLADAAVPDNVADSQLFAFLNKTLSL 121 Query: 121 HKIP---SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + ++ IF E+ +L+ G L+L +C A C VGL Sbjct: 122 MEEGLDYEILTNIF---EIQILERFGISLNLHEC------------------AFCHRVGL 160 Query: 178 PY 179 P+ Sbjct: 161 PF 162 >gi|157371902|ref|YP_001479891.1| DNA repair protein RecO [Serratia proteamaculans 568] gi|166918732|sp|A8GI23|RECO_SERP5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157323666|gb|ABV42763.1| DNA repair protein RecO [Serratia proteamaculans 568] Length = 243 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 10/160 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRL 62 + A +L R Y E +++L++ T +GR + +S R ++ LQ + V W R Sbjct: 5 ERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRWGGR- 63 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDMLNIFLN 119 GE + E+ L S + LY + L + E+E + +D L Sbjct: 64 ----GEVKTLRSAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQA 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + Q EL LL ++G+GLD C +G+ D Sbjct: 120 LAAEDVSPEQALRQFELALLNHLGYGLDFLHCAGSGLPVD 159 >gi|322436218|ref|YP_004218430.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX9] gi|321163945|gb|ADW69650.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX9] Length = 248 Score = 38.5 bits (88), Expect = 0.71, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 19/178 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L + E ++++ + TR++G+ G R+ R + L+ V+ W R Sbjct: 12 EAIVLRTWPFHEADLLVSLFTREFGKVKGIARHAMRSRRRFGGALEPMTHVKATWAERPK 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 Q L R + E + + + F L GL+ + + LP+ ++ + Sbjct: 72 QEL--VRLDAFEIMSSPMTAKIDFVRLAGLELVAEVLDELPDGAVEDAVFRLALAVTGAM 129 Query: 122 KIPSVIGKIFVQIE---LMLLKNIGFGLDLTKCVVTGVTQDL----LWVSPKSGGAVC 172 + +G++++ + L + + +G+ +L +CVV G +DL +W S + G C Sbjct: 130 E----VGRVWMPVTYFCLWMTRLMGWMPELGRCVVCG--EDLRGRTVWYSGVADGVTC 181 >gi|315640638|ref|ZP_07895744.1| recombination protein O [Enterococcus italicus DSM 15952] gi|315483666|gb|EFU74156.1| recombination protein O [Enterococcus italicus DSM 15952] Length = 257 Score = 38.5 bits (88), Expect = 0.75, Method: Compositional matrix adjust. Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 12/176 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG--NLVRVNWRSR 61 + +IL +++ EK+ ++++ T G+ + +VR +HR LQ + S+ Sbjct: 5 ESKGLILFAKNHKEKDKLVKIFTESAGKQMFYVRG--AHRKNNPLQPAIMPFTEATYISQ 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF--RFLPEREPCLELYDMLN---I 116 ++ F H + L +FL G + + + +R LY L Sbjct: 63 FSEQGLSFLHAAKHIHPFRHLQEDIFLAGYATYLLNLADAAIEDRVYDPHLYQFLKEALH 122 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 F++ K +I IF E+ +L+ G + C + G T S K G +C Sbjct: 123 FIDEGKDAEIITNIF---EVQVLQRFGVQFEWQHCAICGETHGKFDFSSKYSGVLC 175 >gi|313633230|gb|EFS00100.1| DNA repair protein RecO [Listeria seeligeri FSL N1-067] Length = 255 Score = 38.5 bits (88), Expect = 0.76, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTSGYFTFFGGN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIENFPS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +IF E+ +L +G + KC + G T S +S G +C Sbjct: 122 DEGYDPQILTQIF---EMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIIC 172 >gi|157150562|ref|YP_001449353.1| DNA repair protein RecO [Streptococcus gordonii str. Challis substr. CH1] gi|189039774|sp|A8AU93|RECO_STRGC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157075356|gb|ABV10039.1| DNA repair protein RecO [Streptococcus gordonii str. Challis substr. CH1] Length = 260 Score = 38.5 bits (88), Expect = 0.76, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 75/171 (43%), Gaps = 10/171 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L R++ E + ++++ T Q G+ + FV++ + ++ P++Q L N ++ + Sbjct: 9 ALVLYNRNFREDDKLVKIFTEQAGKRMFFVKHATNSKLSPVIQP--LTLANLLMKVNDDG 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF--RFLPEREPCLELYDMLNIFLNCHK-- 122 + + + ++S LF+ + V +P+ +P L+ L L + Sbjct: 67 LSYIQDYQDVQPFTRINSDLFIMAYATYVAALADASIPDSQPDAALFAFLTKTLELMEEG 126 Query: 123 -IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 ++ IF E+ +L G L+ +CV T S K G +C Sbjct: 127 LDHEILTNIF---EVQILSRFGVSLNFHECVFCHRTGLPFDFSFKFSGVLC 174 >gi|297242778|ref|ZP_06926716.1| DNA repair protein RecO [Gardnerella vaginalis AMD] gi|296888989|gb|EFH27723.1| DNA repair protein RecO [Gardnerella vaginalis AMD] Length = 248 Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust. Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 32/249 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSH---RMQPIL-------Q 49 ++D+A++L GE + I+ ++T+++G+ VR +S R++P++ Q Sbjct: 4 YRDEAVVLRTFPLGEADRIVVLLTKRHGKVRAVAKGVRRLKSRFGGRLEPLMRVDLLLAQ 63 Query: 50 AGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE 109 +L V+ +A GE + A ++ + L +R E + L Sbjct: 64 GKSLDVVSQAVSIAAYAGEICADYTSYEYANVMLEVVDLLVSNEYTDEYRR--EYQDTLG 121 Query: 110 LYDMLNIFLNC---HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 Y +L L HK P IG ++ L L G+ L CVV G +DL + SP Sbjct: 122 QYRLLTAALLSLSKHKHSPDAIGMSYI---LRALSLAGWSPRLQACVVCGKNEDLCYFSP 178 Query: 166 KSGGAVCRSVGLPYAE--------KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNK 215 GG +C S P + ++ L W + ++D+ +++ Q +Y+L + Sbjct: 179 CIGGMMCASDHTPDSIVCANSTRLQLCALAQGNWSVLDGVSVDSSTMRCVQQWAEYYLER 238 Query: 216 YALQHNIIH 224 ++H Sbjct: 239 PIRSMGLLH 247 >gi|167037773|ref|YP_001665351.1| DNA repair protein RecO [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256751967|ref|ZP_05492837.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus CCSD1] gi|320116188|ref|YP_004186347.1| DNA repair protein RecO [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687665|sp|B0KA52|RECO_THEP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166856607|gb|ABY95015.1| DNA repair protein RecO [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749172|gb|EEU62206.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus CCSD1] gi|319929279|gb|ADV79964.1| DNA repair protein RecO [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 248 Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 6/173 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L GE + I + T+ YG+ + + + + + + N+ Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFIVANYVIFEG 64 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFLNC 120 +N ++E++E+H + + L + + S + + + L E + LY L L Sbjct: 65 KNYYYIDQWELIEAH--RNIEKDLVKFSVASYIAETINKILEENQKSERLYLFLKHSLKA 122 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + IF+ L L+ +G+ L CVV G ++L + S GGAVC Sbjct: 123 VDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVC 175 >gi|28199178|ref|NP_779492.1| DNA repair protein RecO [Xylella fastidiosa Temecula1] gi|182681909|ref|YP_001830069.1| DNA repair protein RecO [Xylella fastidiosa M23] gi|32129944|sp|Q87C04|RECO_XYLFT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691045|sp|B2I606|RECO_XYLF2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28057284|gb|AAO29141.1| DNA repair protein RecO [Xylella fastidiosa Temecula1] gi|182632019|gb|ACB92795.1| DNA repair protein RecO [Xylella fastidiosa M23] gi|307578164|gb|ADN62133.1| DNA repair protein RecO [Xylella fastidiosa subsp. fastidiosa GB514] Length = 243 Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 11/158 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG----QSHRMQPILQAGNLVRVNWRSRL 62 A +L VR + E ++++EV+T+ YGR LG + G + ++ LQ +R + R Sbjct: 8 AFVLHVRPWRETSLLVEVLTQAYGR-LGLIARGVQGLKKQTLRAALQPLQWIRFSAIQR- 65 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 LG+ R E L++ A L L L R +P P ELY + Sbjct: 66 -GELGQLRQAEALDT--APRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRERL 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + EL +L+ +G G +L +C G D Sbjct: 123 RTNDSLAWSLRLFELDILETLGVGFNL-ECDANGTPLD 159 >gi|262281673|ref|ZP_06059442.1| DNA repair protein recO [Streptococcus sp. 2_1_36FAA] gi|262262127|gb|EEY80824.1| DNA repair protein recO [Streptococcus sp. 2_1_36FAA] Length = 259 Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 75/171 (43%), Gaps = 10/171 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L R++ E + ++++ T Q G+ + FV++ + ++ P++Q L N ++ + Sbjct: 8 ALVLYNRNFREDDKLVKIFTEQAGKRMFFVKHATNSKLSPVIQP--LTLANLLMKVNDDG 65 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF--RFLPEREPCLELYDMLNIFLNCHK-- 122 + + + ++S LF+ + V +P+ +P L+ L L + Sbjct: 66 LSYIQDYQDVQPFTRINSDLFIMAYATYVAALADASIPDSQPDAALFAFLTKTLELMEEG 125 Query: 123 -IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 ++ IF E+ +L G L+ +CV T S K G +C Sbjct: 126 LDHEILTNIF---EVQILSRFGVSLNFHECVFCHRTGLPFDFSFKFSGVLC 173 >gi|326803487|ref|YP_004321305.1| DNA repair protein RecO [Aerococcus urinae ACS-120-V-Col10a] gi|326650240|gb|AEA00423.1| DNA repair protein RecO [Aerococcus urinae ACS-120-V-Col10a] Length = 255 Score = 38.1 bits (87), Expect = 0.92, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 16/176 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGN--LVRVNW----RS 60 I+L R Y EK++++++ T+ YG+ + FVRN H+ +L+ + VR + Sbjct: 10 GIVLYQRPYKEKDLLVKIFTQPYGKRMFFVRN--IHKPNNVLKQPSFAFVRAEYIGTIND 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L E + H L + + L +V +P+RE L+ L L+ Sbjct: 68 RGFSFLKEVKSMTFPKHTMSDLEAMAYASYLCHLVDA--SMPDREVDQVLFTQLEQALDK 125 Query: 121 HKI---PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 + P++I I +E+ LL G L C + Q + S G +C+ Sbjct: 126 IETGFNPAIISNI---LEVQLLAKFGVMPQLHACQICQEDQGIFDFSVIFDGLLCQ 178 >gi|294626961|ref|ZP_06705552.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598821|gb|EFF42967.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 240 Score = 38.1 bits (87), Expect = 0.98, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 12/146 (8%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWRSRLAQN 65 +L VR++ E ++++EV+T Q+GR R Q R Q + LQ L++ + R Sbjct: 10 VLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQFSAVQR--GE 67 Query: 66 LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN--CHK 122 L + R E L++ A L+ L G L R P +P ELY + Sbjct: 68 LAQLRQAEALDT--APRLAGDTMLAGFYISELLLRLAPRNDPVPELYACYAQVRSHLASD 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 +P G + E +LK +GF DL Sbjct: 126 LPLAWG--LRRFERDVLKGLGFAFDL 149 >gi|227519873|ref|ZP_03949922.1| recombination protein O [Enterococcus faecalis TX0104] gi|227072667|gb|EEI10630.1| recombination protein O [Enterococcus faecalis TX0104] gi|315144806|gb|EFT88822.1| DNA repair protein RecO [Enterococcus faecalis TX2141] Length = 264 Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 22/180 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IIL + + EK+ ++++ T YG+ + FV+ G + P+L A ++ A + Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVK-GAHRKNNPLLPA--ILPFT----EAVYI 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPER--EPCL-ELYDML 114 G FR E L E + + +F+ YG + + + ++ +P L + M Sbjct: 61 GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA 120 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN K P +I IF E+ LL+ G + CV G TQ S + G +C Sbjct: 121 LSALNEQKDPEIITNIF---EIQLLERFGVRPEWHHCVACGETQGKFDYSSRYSGVLCEK 177 >gi|313618902|gb|EFR90766.1| DNA repair protein RecO [Listeria innocua FSL S4-378] Length = 255 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +I+ E+ +L +G + KC + G T S +S G +C Sbjct: 122 DEGYDPQILTQIY---EMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIIC 172 >gi|16800565|ref|NP_470833.1| DNA repair protein RecO [Listeria innocua Clip11262] gi|20139533|sp|Q92BQ0|RECO_LISIN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|16413970|emb|CAC96728.1| lin1497 [Listeria innocua Clip11262] Length = 255 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +I+ E+ +L +G + KC + G T S +S G +C Sbjct: 122 DEGYDPQILTQIY---EMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIIC 172 >gi|284801847|ref|YP_003413712.1| DNA repair protein RecO [Listeria monocytogenes 08-5578] gi|284994989|ref|YP_003416757.1| DNA repair protein RecO [Listeria monocytogenes 08-5923] gi|284057409|gb|ADB68350.1| DNA repair protein RecO [Listeria monocytogenes 08-5578] gi|284060456|gb|ADB71395.1| DNA repair protein RecO [Listeria monocytogenes 08-5923] Length = 255 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTNGYFTFFGSN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +I+ E+ +L +G + KC + G T S S G +C Sbjct: 122 DEGYDPQILTQIY---EMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIIC 172 >gi|315282356|ref|ZP_07870784.1| DNA repair protein RecO [Listeria marthii FSL S4-120] gi|313613998|gb|EFR87714.1| DNA repair protein RecO [Listeria marthii FSL S4-120] Length = 255 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +I+ E+ +L +G + KC + G T S +S G +C Sbjct: 122 DEGYDPQILTQIY---EMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIIC 172 >gi|261405618|ref|YP_003241859.1| DNA repair protein RecO [Paenibacillus sp. Y412MC10] gi|261282081|gb|ACX64052.1| DNA repair protein RecO [Paenibacillus sp. Y412MC10] Length = 251 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 20/185 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVR 55 M ++ + I++ YGE N I+ + T++ G+ VR + + + + G V Sbjct: 1 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 60 Query: 56 VNWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R LG E++ESH Y + L R L + E + L Sbjct: 61 F----RNGTGLGNLNAGEIMESHHGLREDLVKAAYASYACELLDRVLQDEETGAFWFHQL 116 Query: 115 NIFLNC---HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSG 168 L K P +I ++ E+ +L+ G+G +L C+ + +D+L VSP+ G Sbjct: 117 KACLEALQEDKDPQIIINLY---EMKILQAAGYGPELDVCISCNQSRKDEDML-VSPRLG 172 Query: 169 GAVCR 173 G +CR Sbjct: 173 GVLCR 177 >gi|238796737|ref|ZP_04640243.1| DNA repair protein recO [Yersinia mollaretii ATCC 43969] gi|238719468|gb|EEQ11278.1| DNA repair protein recO [Yersinia mollaretii ATCC 43969] Length = 241 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 25/226 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 R GE + L S A LS S+ GL L R L + L+ D L+ Sbjct: 63 R-----GEVK--TLRSAEPVSLALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLH 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 + Q EL +L ++G+G+D C +G V++ + + + G + Sbjct: 116 CLQSLAGSDGTPEYALRQFELAILAHLGYGVDFLHCSGSGQPVSETMTYRYREEKGFIAS 175 Query: 174 SVGLPYA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ ++L L + DAD+L++A + T L Y Sbjct: 176 LVIDHYSFTGRQLLAL-----AHREFPDADTLRAAKRFTRIALKPY 216 >gi|116872891|ref|YP_849672.1| DNA repair protein RecO [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461072|sp|A0AIR1|RECO_LISW6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116741769|emb|CAK20893.1| recombination protein O [Listeria welshimeri serovar 6b str. SLCC5334] Length = 255 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +I+ E+ +L +G + KC + G T S +S G +C Sbjct: 122 DEGYDPQILTQIY---EMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIIC 172 >gi|47095411|ref|ZP_00233021.1| recombination protein O [Listeria monocytogenes str. 1/2a F6854] gi|254898374|ref|ZP_05258298.1| DNA repair protein RecO [Listeria monocytogenes J0161] gi|254912134|ref|ZP_05262146.1| recombination protein O [Listeria monocytogenes J2818] gi|254936462|ref|ZP_05268159.1| recombination protein O [Listeria monocytogenes F6900] gi|47016232|gb|EAL07155.1| recombination protein O [Listeria monocytogenes str. 1/2a F6854] gi|258609055|gb|EEW21663.1| recombination protein O [Listeria monocytogenes F6900] gi|293590106|gb|EFF98440.1| recombination protein O [Listeria monocytogenes J2818] Length = 255 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 13/174 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGN 63 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM-LNIFLNC 120 LG + EV+E+ + + +F+ + V L + ER+P LY++ I + Sbjct: 64 GLGTLQQGEVIETFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 121 Query: 121 HK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P ++ +I+ E+ +L +G + KC + G T S S G +C Sbjct: 122 DEGYDPQILTQIY---EMKMLPMLGLYPTMDKCAICGETTGHFDFSTSSNGIIC 172 >gi|329924075|ref|ZP_08279338.1| DNA repair protein RecO [Paenibacillus sp. HGF5] gi|328940914|gb|EGG37222.1| DNA repair protein RecO [Paenibacillus sp. HGF5] Length = 251 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 20/185 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVR 55 M ++ + I++ YGE N I+ + T++ G+ VR + + + + G V Sbjct: 1 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 60 Query: 56 VNWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R LG E++ESH Y + L R L + E + L Sbjct: 61 F----RNGTGLGNLNAGEIMESHHGLREDLVKAAYASYACELLDRVLQDEETGAFWFHQL 116 Query: 115 NIFLNC---HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSG 168 L K P +I ++ E+ +L+ G+G +L C+ + +D+L VSP+ G Sbjct: 117 KACLEALQEDKDPQIIINLY---EMKILQAAGYGPELDVCISCNQSRKDEDML-VSPRLG 172 Query: 169 GAVCR 173 G +CR Sbjct: 173 GVLCR 177 >gi|194366745|ref|YP_002029355.1| DNA repair protein RecO [Stenotrophomonas maltophilia R551-3] gi|238693485|sp|B4SRK8|RECO_STRM5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194349549|gb|ACF52672.1| DNA repair protein RecO [Stenotrophomonas maltophilia R551-3] Length = 239 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 14/154 (9%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW------ 58 D +L R+Y E ++++EV++ Q+GR +G + G S +L+A L + W Sbjct: 6 DTGFVLHARAYRETSLLVEVLSAQHGR-IGVLARGVSTAKGQVLRAA-LQPLQWIRFSAL 63 Query: 59 -RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R LAQ G + + + + +L L R P ++P ELY Sbjct: 64 QRGELAQLRGAEALDAAPRLVGQAMLAGFYLSELT-----LRLAPRQDPLPELYLAYGEA 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + + + + E LL ++G G +L Sbjct: 119 RARLGVGAGLAWTLRRFERELLTSLGLGFELDSA 152 >gi|160933321|ref|ZP_02080709.1| hypothetical protein CLOLEP_02166 [Clostridium leptum DSM 753] gi|156867198|gb|EDO60570.1| hypothetical protein CLOLEP_02166 [Clostridium leptum DSM 753] Length = 254 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 21/186 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M D +I+ +S GE + ++ V+TR+ G FVR ++ + ++ + ++ S Sbjct: 1 MQINTDGLIIREQSIGESDRLVTVLTREQGILRAFVRGAKAMKS----RSASSTQLLCYS 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-----RFLPEREPCLELYDMLN 115 RL+ G ++ + E+ ++ S + S+ F PE+ +E D L Sbjct: 57 RLSIYEGREKYIIDEAEPIEVFFSLRTDFEKLSLAQYFCELALALAPEK---MEAGDFLR 113 Query: 116 IFLNC------HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSG 168 + LN K+P+ +I +E+ +L GF DL C G + D ++ K G Sbjct: 114 LVLNALYFLGKGKLPA--AQIKAIVEMRMLSLAGFMPDLVCCAQCGAYEADQMYFMVKQG 171 Query: 169 GAVCRS 174 C S Sbjct: 172 SLYCGS 177 >gi|300717985|ref|YP_003742788.1| DNA repair protein [Erwinia billingiae Eb661] gi|299063821|emb|CAX60941.1| DNA repair protein [Erwinia billingiae Eb661] Length = 244 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 91/240 (37%), Gaps = 25/240 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ + YGR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLLLDLFSENYGRIRVLAKGARGKRSSLKGALQPFTPLLVRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL-YDM 113 R EV A+ +S +L L GL L+ R L + EL +D Sbjct: 63 ---------RGEVKTLRGAEPISLALPLSGLTLYCGLYVNELLSRVLEQETAFTELFFDY 113 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAV 171 L + + EL +L ++G+G+D C +G V + + G + Sbjct: 114 LYCLQALAAVTGSPEPALRRFELAMLGHLGYGVDFMHCAGSGEEVADGMTYTYRAEKGFI 173 Query: 172 CRSVGLPYAEKMLVLPSFLWKEEQTI-DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 V EE++ D D+L++A + T L Y + L R+ Sbjct: 174 ASLV---MGNNTFTGRQLRALEERSFPDIDTLRAAKRFTRIALKPYLGGKPLKSQELFRQ 230 >gi|89100472|ref|ZP_01173334.1| DNA repair protein RecO [Bacillus sp. NRRL B-14911] gi|89084815|gb|EAR63954.1| DNA repair protein RecO [Bacillus sp. NRRL B-14911] Length = 253 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 23/184 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-------SHRMQPILQAGNL 53 M+ + + I+L +YGE N I+ + TR++G+ +G + G S QP L Sbjct: 1 MFEKCEGIVLRTVNYGESNKIVTLYTREWGK-VGVMARGAKKPNSRLSAVTQPFTYGYFL 59 Query: 54 VRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS-IVPLF-RFLPEREPCLELY 111 V+ + L Q + E++ S + + +FL S IV L + + E++P + Sbjct: 60 VQRSSGLGLMQ-----QGEMVSS--MRSIREDIFLTAYASYIVDLTDKTVEEKKPNPFHF 112 Query: 112 DMLNI---FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 ++L+ ++N P ++ I+ E+ +L ++G L KC V G T S + G Sbjct: 113 ELLHQTLNYMNEGYDPEIMVNIY---EMKMLNSLGLYPVLDKCSVCGSTDGHFSFSIREG 169 Query: 169 GAVC 172 G +C Sbjct: 170 GLIC 173 >gi|308180765|ref|YP_003924893.1| DNA repair protein RecO [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046256|gb|ADN98799.1| DNA repair protein RecO [Lactobacillus plantarum subsp. plantarum ST-III] Length = 258 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/182 (19%), Positives = 81/182 (44%), Gaps = 26/182 (14%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I+L R Y E++++++ +T +YG+ + F+R R + A L+ + + Sbjct: 6 NGILLFRRDYRERDMLIKFLTAEYGKKMFFIRGA---RRRGFKMAAELLPFT----MGEY 58 Query: 66 LGEFRFEVLE-----------SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 +G+ R + L H ++ ++ + + + +++ + P+ +P Y L Sbjct: 59 VGDLRDQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDV--AFPDNQPVGRWYQQL 116 Query: 115 NIFL---NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 L + P+++ + +E+ LL+ G +L C V G + L S GG + Sbjct: 117 TSALQLIDQDVAPALVANV---VEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLL 173 Query: 172 CR 173 C+ Sbjct: 174 CQ 175 >gi|238750384|ref|ZP_04611885.1| DNA repair protein recO [Yersinia rohdei ATCC 43380] gi|238711315|gb|EEQ03532.1| DNA repair protein recO [Yersinia rohdei ATCC 43380] Length = 241 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 25/226 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRW-- 60 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 +G + L S A LS S+ GL L R L ++ L+ D L+ Sbjct: 61 -----VGRGEIKTLRSAEPVSLALPLSGSMLYSGLYVNELLSRVLEQQTNYSALFFDYLH 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 + Q EL +L ++G+G+D C +G V+ + + + G + Sbjct: 116 CLQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTYRYREEKGFIAS 175 Query: 174 SVGLPYA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ ++L L + DAD+L++A + T L Y Sbjct: 176 LVVDHYSFTGRQLLAL-----ANREFPDADTLRAAKRFTRIALKPY 216 >gi|257898047|ref|ZP_05677700.1| recombination protein O [Enterococcus faecium Com15] gi|257835959|gb|EEV61033.1| recombination protein O [Enterococcus faecium Com15] Length = 270 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 42/189 (22%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +IL R+Y EK+ ++++ T G+ + +++ G + QP+ A L+ A + Sbjct: 9 GLILSSRNYKEKDKLVKIFTESSGKMMFYIK-GIHRQNQPLAPA--LLPFTE----AVYI 61 Query: 67 GEFRFE-------VLESHCAKLLSSSLFLYGL---------------QSIVPLFRFLPER 104 G FR E V + H + + +FL G Q LF+F + Sbjct: 62 GNFRSEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQA 121 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 ++ D I N IF E+ +L+ G T CVV G T+ S Sbjct: 122 LQRMDQGDDAEIITN----------IF---EVQILQRFGIAPIWTHCVVCGETKGKFDYS 168 Query: 165 PKSGGAVCR 173 K GG +C Sbjct: 169 SKYGGVICE 177 >gi|238753922|ref|ZP_04615282.1| DNA repair protein recO [Yersinia ruckeri ATCC 29473] gi|238707910|gb|EEQ00268.1| DNA repair protein recO [Yersinia ruckeri ATCC 29473] Length = 243 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 37/232 (15%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + +S R ++ LQ + V W Sbjct: 4 WQR-AFVLHSRPYSETSLMLDLFTEGEGRMRVLAKGARSRRSNLKGCLQPFTPLLVRWAG 62 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R GE + L S A LS ++ GL L R L E + Sbjct: 63 R-----GEVK--TLRSAEPVSLALPLSGTMLYSGLYVNELLSRVL---EHGTNYSALFFD 112 Query: 117 FLNC-HKIPSVIGK---IFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L+C + + G + Q EL +L ++G+G+D C +G V + + + G Sbjct: 113 YLHCLQALAATDGSPECVLRQFELAMLASLGYGVDFLHCAGSGQPVADSMTYRYREEKGF 172 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTI------DADSLKSAFQLTDYFLNKY 216 + V Y SF ++ Q + D+D+L++A + T L Y Sbjct: 173 IASLVVDHY--------SFTGRQLQALANREFPDSDTLRAAKRFTRMALRPY 216 >gi|293556345|ref|ZP_06674926.1| DNA repair protein RecO [Enterococcus faecium E1039] gi|291601412|gb|EFF31683.1| DNA repair protein RecO [Enterococcus faecium E1039] Length = 270 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 42/189 (22%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +IL R+Y EK+ ++++ T G+ + +++ + HR L L A + Sbjct: 9 GLILSSRNYKEKDKLVKIFTESSGKMMFYIK--EIHRQNQPLAPALLPFTE-----AVYI 61 Query: 67 GEFRFE-------VLESHCAKLLSSSLFLYGL---------------QSIVPLFRFLPER 104 G FR E V + H + + +FL G Q LF+F + Sbjct: 62 GNFRSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQA 121 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 ++ D I N IF E+ +L+ G T CVV G T+ S Sbjct: 122 LQRMDQGDDAEIITN----------IF---EVQILQRFGIAPIWTHCVVCGETKGKFDYS 168 Query: 165 PKSGGAVCR 173 K GG +C Sbjct: 169 SKYGGVICE 177 >gi|28378609|ref|NP_785501.1| DNA repair protein RecO [Lactobacillus plantarum WCFS1] gi|254556824|ref|YP_003063241.1| DNA repair protein RecO [Lactobacillus plantarum JDM1] gi|38258515|sp|Q88VS1|RECO_LACPL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28271445|emb|CAD64350.1| DNA repair protein RecO [Lactobacillus plantarum WCFS1] gi|254045751|gb|ACT62544.1| DNA repair protein RecO [Lactobacillus plantarum JDM1] Length = 258 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/182 (19%), Positives = 81/182 (44%), Gaps = 26/182 (14%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I+L R Y E++++++ +T +YG+ + F+R R + A L+ + + Sbjct: 6 NGILLFRRDYRERDMLIKFLTAEYGKKMFFIRGA---RRRGFKMAAELLPFT----MGEY 58 Query: 66 LGEFRFEVLE-----------SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 +G+ R + L H ++ ++ + + + +++ + P+ +P Y L Sbjct: 59 VGDLRDQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDV--AFPDNQPVGRWYQQL 116 Query: 115 NIFL---NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 L + P+++ + +E+ LL+ G +L C V G + L S GG + Sbjct: 117 TSALQLIDQDVAPALVANV---VEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLL 173 Query: 172 CR 173 C+ Sbjct: 174 CQ 175 >gi|300768137|ref|ZP_07078042.1| recombination protein O [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494201|gb|EFK29364.1| recombination protein O [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 262 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/182 (19%), Positives = 81/182 (44%), Gaps = 26/182 (14%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I+L R Y E++++++ +T +YG+ + F+R R + A L+ + + Sbjct: 10 NGILLFRRDYRERDMLIKFLTAEYGKKMFFIRGA---RRRGFKMAAELLPFT----MGEY 62 Query: 66 LGEFRFEVLE-----------SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 +G+ R + L H ++ ++ + + + +++ + P+ +P Y L Sbjct: 63 VGDLRDQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDV--AFPDNQPVGRWYQQL 120 Query: 115 NIFL---NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 L + P+++ + +E+ LL+ G +L C V G + L S GG + Sbjct: 121 TSALQLIDQDVAPALVANV---VEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLL 177 Query: 172 CR 173 C+ Sbjct: 178 CQ 179 >gi|257886867|ref|ZP_05666520.1| recombination protein O [Enterococcus faecium 1,141,733] gi|293568653|ref|ZP_06679968.1| DNA repair protein RecO [Enterococcus faecium E1071] gi|293571623|ref|ZP_06682644.1| DNA repair protein RecO [Enterococcus faecium E980] gi|257822921|gb|EEV49853.1| recombination protein O [Enterococcus faecium 1,141,733] gi|291588613|gb|EFF20446.1| DNA repair protein RecO [Enterococcus faecium E1071] gi|291608293|gb|EFF37594.1| DNA repair protein RecO [Enterococcus faecium E980] Length = 272 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 42/189 (22%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +IL R+Y EK+ ++++ T G+ + +++ G + QP+ A L+ A + Sbjct: 9 GLILSSRNYKEKDKLVKIFTESSGKMMFYIK-GIHRQNQPLAPA--LLPFT----EAVYI 61 Query: 67 GEFRFE-------VLESHCAKLLSSSLFLYGL---------------QSIVPLFRFLPER 104 G FR E V + H + + +FL G Q LF+F + Sbjct: 62 GNFRSEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQA 121 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 ++ D I N IF E+ +L+ G T CVV G T+ S Sbjct: 122 LQRMDQGDDAEIITN----------IF---EVQILQRFGIAPIWTHCVVCGETKGKFDYS 168 Query: 165 PKSGGAVCR 173 K GG +C Sbjct: 169 SKYGGVICE 177 >gi|315645985|ref|ZP_07899106.1| DNA repair protein RecO [Paenibacillus vortex V453] gi|315278746|gb|EFU42060.1| DNA repair protein RecO [Paenibacillus vortex V453] Length = 262 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 20/202 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVR 55 M ++ + I++ YGE N I+ + T++ G+ VR + + + + G V Sbjct: 12 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 71 Query: 56 VNWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R LG E++ESH Y + L R L + E + L Sbjct: 72 F----RNGTGLGNLNAGEIMESHHRLREDLVKAAYASYACELLDRVLQDEETGAFWFHQL 127 Query: 115 NIFLNC---HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSG 168 + K P +I ++ E+ +L+ G+G +L C+ T +D+L VSP+ G Sbjct: 128 KACMEALQEDKDPQIIINLY---EMKILQAAGYGPELDVCISCNQTRKDEDML-VSPRLG 183 Query: 169 GAVCRSVGLPYAEKMLVLPSFL 190 G +CR M V P L Sbjct: 184 GVLCRYCKHLDPPAMSVTPRTL 205 >gi|290579547|ref|YP_003483939.1| putative DNA repair protein [Streptococcus mutans NN2025] gi|254996446|dbj|BAH87047.1| putative DNA repair protein [Streptococcus mutans NN2025] Length = 251 Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 28/213 (13%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNWR--S 60 ++L R + E + ++++ T G+H+ FVR+ + ++ QP++ A ++++N S Sbjct: 8 GLVLYNRQFREDDKLVKIFTETSGKHMFFVRHATNSKLSSVIQPLILANFILKINNHGLS 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV-------PLFRFLPEREPCLELYDM 113 + G F+ + + KL ++ + + + PLF FL + LEL D Sbjct: 68 YIEDYKGVSLFKEINADIYKLAYATYLVSLADAAISDAVYDAPLFAFLIK---TLELMDE 124 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC- 172 + ++ IF E+ +L G L+ CV S + G +C Sbjct: 125 GLDY-------EILTNIF---EIQILDRFGVQLNFHDCVFCHRVGLAFDFSHRYSGLLCP 174 Query: 173 -RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKS 204 PY + +L + QT+ DSLK+ Sbjct: 175 EHYEKDPYRSHLDPNVPYLLNQFQTLHFDSLKT 207 >gi|257464704|ref|ZP_05629075.1| DNA repair protein RecO [Actinobacillus minor 202] gi|257450364|gb|EEV24407.1| DNA repair protein RecO [Actinobacillus minor 202] Length = 241 Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 17/165 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ +L R Y E ++++++ T YGR + + R ++ +LQ + + W Sbjct: 6 WQR-GFVLHKREYSETSLLVDLFTENYGRITLLAKGARRPRSPLKALLQPFTPLLLRWSG 64 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + G+ + +E+ L ++ LY G L R L + EL+ + +L Sbjct: 65 K-----GDLKVLTKVEAAALTLPMNTKALYSGFYINEVLVRVLENQTAYQELF---HHYL 116 Query: 119 NCHKIPSV----IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 C ++ + I E +LK +G+G+D T C+ TG+ D Sbjct: 117 QCVTHLALRSEELEPILRTFEFHVLKALGYGVDFTHCMATGLDVD 161 >gi|257882781|ref|ZP_05662434.1| recombination protein O [Enterococcus faecium 1,231,502] gi|257884089|ref|ZP_05663742.1| recombination protein O [Enterococcus faecium 1,231,501] gi|294622999|ref|ZP_06701888.1| DNA repair protein RecO [Enterococcus faecium U0317] gi|257818439|gb|EEV45767.1| recombination protein O [Enterococcus faecium 1,231,502] gi|257819927|gb|EEV47075.1| recombination protein O [Enterococcus faecium 1,231,501] gi|291597555|gb|EFF28717.1| DNA repair protein RecO [Enterococcus faecium U0317] Length = 270 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 42/189 (22%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +IL R+Y EK+ ++++ T G+ + +++ G + QP+ A L+ A + Sbjct: 9 GLILSSRNYKEKDKLVKIFTESSGKMMFYIK-GIHRQNQPLAPA--LLPFTE----AVYI 61 Query: 67 GEFRFE-------VLESHCAKLLSSSLFLYGL---------------QSIVPLFRFLPER 104 G FR E V + H + + +FL G Q LF+F + Sbjct: 62 GNFRSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQA 121 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 ++ D I N IF E+ +L+ G T CVV G T+ S Sbjct: 122 LQRMDQGDDAEIITN----------IF---EVQILQRFGIAPIWTHCVVCGETKGKFDYS 168 Query: 165 PKSGGAVCR 173 K GG +C Sbjct: 169 SKYGGVICE 177 >gi|332205069|gb|EGJ19132.1| DNA repair protein RecO [Streptococcus pneumoniae GA47368] Length = 256 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 44/219 (20%), Positives = 87/219 (39%), Gaps = 40/219 (18%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ + Sbjct: 9 GLVLYNRNFREDDKLIKIFTEQVGKRMFFVKHAAQSKLAPVIQP--LVLARFLLRINDDG 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIV---------------PLFRFLPER----EPC 107 + + E ++S LF+ + V PLF FL + E Sbjct: 67 LSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELMEAG 126 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 L+ + NIF E+ +L G L+ +CV S K Sbjct: 127 LDYQVLTNIF-----------------EIQILTRFGISLNFNECVFCHRVGQAFDFSFKY 169 Query: 168 GGAVCRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 G +C + + P+ +L + Q ID ++L++ Sbjct: 170 GACLCPEHYHEDKRRCHLNPNIPYLLNQFQAIDFETLET 208 >gi|238788222|ref|ZP_04632017.1| DNA repair protein recO [Yersinia frederiksenii ATCC 33641] gi|238723809|gb|EEQ15454.1| DNA repair protein recO [Yersinia frederiksenii ATCC 33641] Length = 241 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 25/226 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWTG 62 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 R GE + L S A LS S+ GL L R L + L+ D L+ Sbjct: 63 R-----GEVK--TLRSAEPVSLALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLH 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 + Q EL +L ++G+G+D C +G V+ + + + G + Sbjct: 116 CLQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTYRYREEKGFIAS 175 Query: 174 SVGLPYA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ ++L L + DAD+L++A + T L Y Sbjct: 176 LVVDHYSFTGRQLLAL-----ANREFPDADTLRAAKRFTRIALKPY 216 >gi|328474972|gb|EGF45766.1| DNA repair protein RecO [Listeria monocytogenes 220] Length = 254 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 14/174 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ +G V G + + + L + + N Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGK-IGVVARGAKTKSR-LAAVTQLFTNGYFTFFGSN 62 Query: 66 -LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFL--- 118 LG + EV+E+ + + +F+ + V L + ER+P LY++ L Sbjct: 63 GLGTLQQGEVIENFSS--IQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDI 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 N P ++ +IF E+ +L +G + KC + G T S S G +C Sbjct: 121 NEGYDPQILTQIF---EMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIIC 171 >gi|69247286|ref|ZP_00604287.1| Recombination protein O, RecO [Enterococcus faecium DO] gi|257879931|ref|ZP_05659584.1| recombination protein O [Enterococcus faecium 1,230,933] gi|258616602|ref|ZP_05714372.1| DNA repair protein RecO, putative [Enterococcus faecium DO] gi|261208623|ref|ZP_05923060.1| recombination protein O [Enterococcus faecium TC 6] gi|289566738|ref|ZP_06447152.1| DNA repair protein RecO [Enterococcus faecium D344SRF] gi|294616319|ref|ZP_06696112.1| DNA repair protein RecO [Enterococcus faecium E1636] gi|68194908|gb|EAN09378.1| Recombination protein O, RecO [Enterococcus faecium DO] gi|257814159|gb|EEV42917.1| recombination protein O [Enterococcus faecium 1,230,933] gi|260077125|gb|EEW64845.1| recombination protein O [Enterococcus faecium TC 6] gi|289161459|gb|EFD09345.1| DNA repair protein RecO [Enterococcus faecium D344SRF] gi|291590833|gb|EFF22549.1| DNA repair protein RecO [Enterococcus faecium E1636] Length = 270 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 34/188 (18%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +IL R+Y EK+ ++++ T G+ + +++ G + QP+ A L+ + Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIK-GIHRQNQPLAPA--LLPFTEAVYIG 62 Query: 64 QNLGE---FRFEVLESHCAKLLSSSLFLYGL---------------QSIVPLFRFLPERE 105 L E F V + H + + +FL G Q LF+F + Sbjct: 63 NFLSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQAL 122 Query: 106 PCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 ++ D I N E+ +L+ G T CVV G T+ S Sbjct: 123 QRMDQGDDAEIITNI-------------FEVQILQRFGIAPIWTHCVVCGETKGKFDYSS 169 Query: 166 KSGGAVCR 173 K GG +C Sbjct: 170 KYGGVICE 177 >gi|240949698|ref|ZP_04754033.1| DNA repair protein RecO [Actinobacillus minor NM305] gi|240295956|gb|EER46632.1| DNA repair protein RecO [Actinobacillus minor NM305] Length = 241 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 17/165 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ +L R Y E ++++++ T YGR + + R ++ +LQ + + W Sbjct: 6 WQR-GFVLHKREYSETSLLVDLFTENYGRITLLAKGARRPRSPLKALLQPFTPLLLRWSG 64 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + G+ + +E+ L ++ LY G L R L + EL+ + +L Sbjct: 65 K-----GDLKVLTKVEAAALTLPMNTKALYSGFYINEVLVRVLENQTAYQELF---HHYL 116 Query: 119 NCHKIPSV----IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 C ++ + I E +LK +G+G+D T C+ TG+ D Sbjct: 117 QCVTHLALRSEELEPILRTFEFHVLKALGYGVDFTHCMATGLEVD 161 >gi|257890446|ref|ZP_05670099.1| recombination protein O [Enterococcus faecium 1,231,410] gi|294618703|ref|ZP_06698236.1| DNA repair protein RecO [Enterococcus faecium E1679] gi|257826806|gb|EEV53432.1| recombination protein O [Enterococcus faecium 1,231,410] gi|291595046|gb|EFF26390.1| DNA repair protein RecO [Enterococcus faecium E1679] Length = 270 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 42/192 (21%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +IL R+Y EK+ ++++ T G+ + +++ G + QP+ A L+ A Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIK-GIHRQNQPLAPA--LLPFT----EA 58 Query: 64 QNLGEFRFE-------VLESHCAKLLSSSLFLYGL---------------QSIVPLFRFL 101 +G FR E V + H + + +FL G Q LF+F Sbjct: 59 VYIGNFRSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFT 118 Query: 102 PEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + ++ D I N E+ +L+ G T CVV G T+ Sbjct: 119 QQALQRMDQGDDAEIITNI-------------FEVQILQRFGIAPIWTHCVVCGETKGKF 165 Query: 162 WVSPKSGGAVCR 173 S K GG +C Sbjct: 166 DYSSKYGGVICE 177 >gi|297617860|ref|YP_003703019.1| DNA repair protein RecO [Syntrophothermus lipocalidus DSM 12680] gi|297145697|gb|ADI02454.1| DNA repair protein RecO [Syntrophothermus lipocalidus DSM 12680] Length = 250 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 25/203 (12%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGR----HLGFVRNGQSHR--MQPI------LQ 49 Y+ +AI+L + + E + I+ R+ G+ G + S R +QP L Sbjct: 4 YYITEAIVLKNQDFIETDKIVTFFARREGKLRAVAKGIKKPNSSLRGAVQPFCFSCLHLS 63 Query: 50 AGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE 109 G + + + R+ + G R +++++ SL+L L L + L E +P E Sbjct: 64 RGRELDLITQGRIIEFFGYVRDDMVKT------LHSLYLMEL-----LDKSLAEADPHPE 112 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 ++D L C + EL L + +G+ L L KC++ G + ++ +S K GG Sbjct: 113 VFDATLTVLRCLEDGPFSPLAVRWFELKLARELGYALGLQKCILCGRGKAVV-LSIKDGG 171 Query: 170 AVCRSVGLPYAEKML-VLPSFLW 191 +C + ++ L LW Sbjct: 172 VLCDRCNRASTDNLIFALDGELW 194 >gi|238784189|ref|ZP_04628202.1| DNA repair protein recO [Yersinia bercovieri ATCC 43970] gi|238714898|gb|EEQ06897.1| DNA repair protein recO [Yersinia bercovieri ATCC 43970] Length = 241 Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 25/226 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWTG 62 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 R GE + L S A LS S+ GL L R L + L+ D L+ Sbjct: 63 R-----GEVK--TLRSAEPVSLALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLH 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 + Q EL +L ++G+G+D C +G V + + + G + Sbjct: 116 CLQSLAGSDGTPEYALRQFELAILAHLGYGVDFLHCAGSGQPVADTMTYRYREEKGFIAS 175 Query: 174 SVGLPYA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ ++L L + DAD+L++A + T L Y Sbjct: 176 LVIDHYSFTGRQLLAL-----ANREFPDADTLRAAKRFTRIALKPY 216 >gi|194017652|ref|ZP_03056262.1| DNA repair protein RecO [Bacillus pumilus ATCC 7061] gi|194010552|gb|EDW20124.1| DNA repair protein RecO [Bacillus pumilus ATCC 7061] Length = 256 Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 19/184 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-------SHRMQPILQAGNL 53 M + + I+L YGE N I+ ++TR++G+ +G + G S QP L L Sbjct: 1 MLIKSEGIVLRTTDYGETNKIVTLLTREHGK-IGVMARGAKKSNSRLSAISQPFLYGTFL 59 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLEL 110 ++ + LG + E++ES + + LFL + + L + E++P L Sbjct: 60 IQS------STGLGTLQQGEMIES--MRTIREDLFLTAYAAYMTELLDKGTEEKKPNPYL 111 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 +++L L + I +E+ +L +G +L +CV G + S + G Sbjct: 112 FELLLQSLRHLNEGTDADVILFIVEVKMLSVMGMKPELDQCVHCGQKEGQFHFSIRDNGF 171 Query: 171 VCRS 174 +C++ Sbjct: 172 ICQN 175 >gi|189425855|ref|YP_001953032.1| DNA repair protein RecO [Geobacter lovleyi SZ] gi|189422114|gb|ACD96512.1| DNA repair protein RecO [Geobacter lovleyi SZ] Length = 209 Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 28/171 (16%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 Q AIIL +YGE + I+ + T ++GR GF ++ ++ R + G L N RLA Sbjct: 5 QCQAIILSTLNYGESDRIVSLFTLEHGRLRGFAKSARASRKR---FGGQLEPAN---RLA 58 Query: 64 QNL-----GEFRFEVLE-SHC-----AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 L G R E +E S+C +L S +L LY + + L PE P L+ Sbjct: 59 VTLSLREDGLSRIERVEQSNCYPELRERLESLALALYACELVEAL---TPEGHPLPRLFR 115 Query: 113 MLNIFLN--CHKIPSVIGKIFVQIELMLLKNIGFGLD------LTKCVVTG 155 +L+ + S + F ++ L+ + LD L+ C+ TG Sbjct: 116 LLSTLFEHLAGQSGSPTDRRFFEMNLLNILGYRPALDTAALQPLSDCLKTG 166 >gi|330686117|gb|EGG97738.1| DNA repair protein RecO [Staphylococcus epidermidis VCU121] Length = 252 Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 39/216 (18%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ +YG + + ++ +++ LQA G Sbjct: 1 MLMKQKGIIIKSVEYGESDKIITILN-EYGSKVPLMAR-RAKKIKSGLQAHTQMFVYGLF 58 Query: 54 VRVNWRSRLAQNL-------GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP 106 + WR N E + ++ ES A L + ++ R + E E Sbjct: 59 IYNKWRGMGTLNCVDVINQHYELQLDLYESSFATLCAETID-----------RSMEENEI 107 Query: 107 CLELYDMLNIFLNCHKIPSVIGKIFVQIELML--LKNIGFGLDLTKCVVTGVTQD--LLW 162 YD+LN L KI S + I ++L + GF KCV++G T L+ Sbjct: 108 SKYNYDLLNFVLT--KISSGQSAQLMSIIVLLKCMNKFGFSALFNKCVISGNTDQSKLVG 165 Query: 163 VSPKSGGAVCRSV------GLPYAEKMLVLPSFLWK 192 S K GA+ +SV L + K L L L+K Sbjct: 166 YSFKFDGAISQSVAYQDPHALQLSNKTLYLLDVLYK 201 >gi|157693027|ref|YP_001487489.1| DNA repair protein RecO [Bacillus pumilus SAFR-032] gi|166918728|sp|A8FFB2|RECO_BACP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157681785|gb|ABV62929.1| DNA repair protein RecO [Bacillus pumilus SAFR-032] Length = 256 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 19/184 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-------SHRMQPILQAGNL 53 M + + I+L YGE N I+ ++TR++G+ +G + G S QP L L Sbjct: 1 MLIKSEGIVLRTTDYGETNKIVTLLTREHGK-IGVMARGAKKSNSRLSAISQPFLYGTFL 59 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLEL 110 ++ + LG + E++ES + + LFL + + L + E++P L Sbjct: 60 IQS------STGLGTLQQGEMIES--MRTIREDLFLTAYAAYMTELLDKGTEEKKPNPYL 111 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 +++L L + I +E+ +L +G +L +CV G + S + G Sbjct: 112 FELLLQSLRHLNEGTDADIILFIVEVKMLSVMGMKPELDQCVHCGQKEGQFHFSIRDNGF 171 Query: 171 VCRS 174 +C++ Sbjct: 172 ICQN 175 >gi|227551967|ref|ZP_03982016.1| recombination protein RecO [Enterococcus faecium TX1330] gi|257895441|ref|ZP_05675094.1| recombination protein O [Enterococcus faecium Com12] gi|293378308|ref|ZP_06624477.1| DNA repair protein RecO [Enterococcus faecium PC4.1] gi|227178872|gb|EEI59844.1| recombination protein RecO [Enterococcus faecium TX1330] gi|257832006|gb|EEV58427.1| recombination protein O [Enterococcus faecium Com12] gi|292643172|gb|EFF61313.1| DNA repair protein RecO [Enterococcus faecium PC4.1] Length = 272 Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 42/189 (22%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +IL R+Y EK+ ++++ T G+ + +++ G + QP+ A L+ A + Sbjct: 9 GLILSSRNYKEKDKLVKIFTESSGKMMFYIK-GIHRQNQPLAPA--LLPFT----EAVYI 61 Query: 67 GEFRFE-------VLESHCAKLLSSSLFLYGL---------------QSIVPLFRFLPER 104 G FR E V + H + + +FL G Q LF+F + Sbjct: 62 GNFRSEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQA 121 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 ++ D I N IF E+ +L+ G T CVV G T+ S Sbjct: 122 LQRMDQGDDAEIITN----------IF---EVQILQRFGITPIWTHCVVCGETKGKFDYS 168 Query: 165 PKSGGAVCR 173 K GG +C Sbjct: 169 SKYGGVICE 177 >gi|322391156|ref|ZP_08064628.1| recombination protein O [Streptococcus peroris ATCC 700780] gi|321145909|gb|EFX41298.1| recombination protein O [Streptococcus peroris ATCC 700780] Length = 256 Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust. Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 40/219 (18%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + ++ + Sbjct: 9 GLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQTKLAPVIQP--LVLARFLMKVNDDG 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIV---------------PLFRFLPE----REPC 107 + + E ++S LF+ + V PLF FL + E Sbjct: 67 LSYIEDYREVMTFPKINSDLFVMAYATYVAALADASLQDNHEDAPLFAFLQKVLELMEEG 126 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 L+ + NIF E+ LL G L+ +C S K Sbjct: 127 LDYQVLTNIF-----------------EIQLLTRFGISLNFNECTFCHRVGQAFDFSFKY 169 Query: 168 GGAVCRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 GG +C ++ + P+ +L + Q ID ++L++ Sbjct: 170 GGCLCPDHYHEDEKRCHLNPNIPYLLNQFQAIDFETLET 208 >gi|168483659|ref|ZP_02708611.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1873-00] gi|172043032|gb|EDT51078.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1873-00] Length = 256 Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust. Identities = 44/219 (20%), Positives = 87/219 (39%), Gaps = 40/219 (18%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ + Sbjct: 9 GLVLYNRNFREDDKLIKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRINDDG 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIV---------------PLFRFLPER----EPC 107 + + E ++S LF+ + V PLF FL + E Sbjct: 67 LSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELMEAG 126 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 L+ + NIF E+ +L G L+ +CV S K Sbjct: 127 LDYQVLTNIF-----------------EIQILTRFGISLNFNECVFCHRVGQAFDFSFKY 169 Query: 168 GGAVCRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 G +C + + P+ +L + Q ID ++L++ Sbjct: 170 GACLCPEHYHEDKRRCHLNPNIPYLLNQFQAIDFETLET 208 >gi|116626995|ref|YP_819614.1| DNA repair protein RecO [Streptococcus thermophilus LMD-9] gi|122268400|sp|Q03N04|RECO_STRTD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116100272|gb|ABJ65418.1| DNA replication and repair protein RecO [Streptococcus thermophilus LMD-9] Length = 257 Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 30/48 (62%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV 54 +IL R+Y E + ++++ T+Q G+ + FVR G S ++ ++Q N+ Sbjct: 8 GVILFNRNYRENDKLVKIFTKQAGKRMFFVRGGGSGKLSAVIQPLNIA 55 >gi|197285741|ref|YP_002151613.1| DNA repair protein [Proteus mirabilis HI4320] gi|238693200|sp|B4F045|RECO_PROMH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194683228|emb|CAR43909.1| DNA repair protein [Proteus mirabilis HI4320] Length = 246 Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 88/225 (39%), Gaps = 23/225 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWR 59 WQ A ++ R Y E +++L+ T GR + + G R P+ LQ + + W Sbjct: 4 WQR-AFVIHARPYSETSLLLDFFTENEGR-VRILSKGARGRRSPLKGALQPFTPLLIRWS 61 Query: 60 SRLAQNLGEFRF--EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY----DM 113 R GE + + A L+ ++ GL L R L L+ Sbjct: 62 GR-----GEIKTLRDAEPISLALPLTGTVLYSGLYLNELLSRVLENGTSYSTLFFEYLSC 116 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAV 171 L I P + F EL LL +G+GLD C +G V+ + + + G + Sbjct: 117 LQILAASETTPEAALRRF---ELALLTQLGYGLDFLHCAGSGEPVSDTMTYRYREEKGFI 173 Query: 172 CRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ L L S +E T A +LK+A + T L Y Sbjct: 174 ASLVVDHYSFTGLELKSLAKREFPT--AGTLKAAKRFTRMALKPY 216 >gi|227356255|ref|ZP_03840644.1| recombination protein O [Proteus mirabilis ATCC 29906] gi|227163719|gb|EEI48635.1| recombination protein O [Proteus mirabilis ATCC 29906] Length = 246 Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 88/225 (39%), Gaps = 23/225 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWR 59 WQ A ++ R Y E +++L+ T GR + + G R P+ LQ + + W Sbjct: 4 WQR-AFVIHARPYSETSLLLDFFTENEGR-VRILSKGARGRRSPLKGALQPFTPLLIRWS 61 Query: 60 SRLAQNLGEFRF--EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY----DM 113 R GE + + A L+ ++ GL L R L L+ Sbjct: 62 GR-----GEIKTLRDAEPISLALPLTGTVLYSGLYLNELLSRVLENGTSYSALFFEYLSC 116 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAV 171 L I P + F EL LL +G+GLD C +G V+ + + + G + Sbjct: 117 LQILAASETTPEAALRRF---ELALLTQLGYGLDFLHCAGSGEPVSDTMTYRYREEKGFI 173 Query: 172 CRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ L L S +E T A +LK+A + T L Y Sbjct: 174 ASLVVDHYSFTGLELKSLAKREFPT--AGTLKAAKRFTRMALKPY 216 >gi|15838839|ref|NP_299527.1| DNA repair protein RecO [Xylella fastidiosa 9a5c] gi|17865569|sp|Q9PB96|RECO_XYLFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|9107402|gb|AAF85047.1|AE004037_8 DNA repair protein RecO [Xylella fastidiosa 9a5c] Length = 243 Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 11/158 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG----QSHRMQPILQAGNLVRVNWRSRL 62 A +L VR + E ++++EV+T+ YGR LG + G + ++ LQ +R + R Sbjct: 8 AFVLHVRPWRETSLLVEVLTQAYGR-LGLIARGVQGLKKQTLRAALQPLQWIRFSAIQR- 65 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 LG+ R E L++ A L L L R +P P ELY + Sbjct: 66 -GELGQLRQAEALDT--APRLKGEAMLASFYINELLLRLVPRHAPVNELYLAYSQTRERL 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + E +L+ +G G +L +C G D Sbjct: 123 RTSDSLAWSLRLFEREILETLGVGFNL-ECDANGTPLD 159 >gi|167767682|ref|ZP_02439735.1| hypothetical protein CLOSS21_02217 [Clostridium sp. SS2/1] gi|317499139|ref|ZP_07957416.1| DNA repair protein RecO [Lachnospiraceae bacterium 5_1_63FAA] gi|167710699|gb|EDS21278.1| hypothetical protein CLOSS21_02217 [Clostridium sp. SS2/1] gi|291560816|emb|CBL39616.1| DNA replication and repair protein RecO [butyrate-producing bacterium SSC/2] gi|316893552|gb|EFV15757.1| DNA repair protein RecO [Lachnospiraceae bacterium 5_1_63FAA] Length = 240 Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 135 ELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 E+ +L G G++ ++CV G +DL+W + G VC Sbjct: 139 EIKILALYGIGIEASRCVKCGSREDLIWFDARESGVVC 176 >gi|238762799|ref|ZP_04623768.1| DNA repair protein recO [Yersinia kristensenii ATCC 33638] gi|238699104|gb|EEP91852.1| DNA repair protein recO [Yersinia kristensenii ATCC 33638] Length = 241 Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 25/226 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWTG 62 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 R GE + L S A L+ S+ GL L R L + L+ D L+ Sbjct: 63 R-----GEVK--TLRSAEPVSLALPLTGSMLYSGLYVNELLARVLEHQTNYSALFFDYLH 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 + Q EL +L ++G+G+D C +G V+ + + + G + Sbjct: 116 CLQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTYRYREEKGFIAS 175 Query: 174 SVGLPYA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ ++L L + DAD+L++A + T L Y Sbjct: 176 LVVDHYSFTGRQLLAL-----ANREFPDADTLRAAKRFTRIALKPY 216 >gi|310822251|ref|YP_003954609.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] gi|309395323|gb|ADO72782.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] Length = 244 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 3/176 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 D+A++L YGE + ++ ++TRQ+G+ F + R L+ +RV+ Sbjct: 6 DEALVLSTVDYGEADRMVTLLTRQHGKLTAFAAGARKSKRRFAGALEPFMYLRVHLVETR 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + ++L + A L L ++ + EP EL+ +L +L Sbjct: 66 GSTVRLDSTDILAGYYAARQELPLIARALYAVEMCRELTRDHEPHPELFALLEEYLVRLN 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGL 177 + EL L + G C + G + GGAVC G+ Sbjct: 126 AKEAGPTSLLAFELSALAHAGLMPRFDACALCGGEPGERPRFDQAHGGAVCEPCGV 181 >gi|90021694|ref|YP_527521.1| hypothetical protein Sde_2049 [Saccharophagus degradans 2-40] gi|89951294|gb|ABD81309.1| cell surface receptor IPT/TIG [Saccharophagus degradans 2-40] Length = 14609 Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Query: 1 MYWQDDAIILG----VRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV 56 +YW+DD II G +R+Y + + V + +G + G + ++ +L AG+ + Sbjct: 13917 VYWRDDGIISGGESVMRNYLDSGRCIVVDSEDFGYYWGGALPNEYFGLEEMLYAGSFGTI 13976 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLF 87 N L +GE E E + + SSS + Sbjct: 13977 NTAGSLEDEIGELEPENSEDSISPVPSSSQY 14007 >gi|113868515|ref|YP_727004.1| DNA repair protein RecO [Ralstonia eutropha H16] gi|113527291|emb|CAJ93636.1| combinational DNA repair protein (RecF pathway) [Ralstonia eutropha H16] Length = 297 Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 25/164 (15%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH---RMQPILQAGNLVRVNWRS 60 + +L Y E ++IL++ TR YGR + V G ++ +LQ + V V+W Sbjct: 65 EQPGFVLHAWPYRETSLILDLFTRDYGR-ISMVAKGAKRPHSALRAVLQHFHPVSVSWSG 123 Query: 61 RLAQNLGEFRFEV-------LESHCAKLLSSSLFLYGLQSIVPLFRFLPERE--PCLELY 111 R GE + + L S+ +L L L RF P + P L + Sbjct: 124 R-----GEVKTLTKAEWVGGMPPLAGDALLSAFYLNEL-----LMRFCPREDAHPALFRH 173 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + H G + E +LL+ GF + +C+ TG Sbjct: 174 YLTTLTRLAHG--EQAGLVLRSFERVLLQETGFAVAFDQCLSTG 215 >gi|71274464|ref|ZP_00650752.1| Recombination protein O, RecO [Xylella fastidiosa Dixon] gi|71901685|ref|ZP_00683761.1| Recombination protein O, RecO [Xylella fastidiosa Ann-1] gi|170730566|ref|YP_001775999.1| DNA repair protein RecO [Xylella fastidiosa M12] gi|238687924|sp|B0U3E0|RECO_XYLFM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71164196|gb|EAO13910.1| Recombination protein O, RecO [Xylella fastidiosa Dixon] gi|71728555|gb|EAO30710.1| Recombination protein O, RecO [Xylella fastidiosa Ann-1] gi|167965359|gb|ACA12369.1| DNA repair protein RecO [Xylella fastidiosa M12] Length = 243 Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 11/158 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG----QSHRMQPILQAGNLVRVNWRSRL 62 A +L VR + E ++++EV+T+ YGR LG + G + ++ LQ +R + R Sbjct: 8 AFVLHVRPWRETSLLVEVLTQAYGR-LGLIARGVQGLKKQTLRAALQPLQWIRFSAIQR- 65 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 LG+ R E L++ A L L L R +P P ELY + Sbjct: 66 -GELGQLRQAEALDT--APRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRERL 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + E +L+ +G G +L +C G D Sbjct: 123 RTNDSLAWSLRLFERDILETLGVGFNL-ECDANGTPLD 159 >gi|219870404|ref|YP_002474779.1| DNA repair protein RecO [Haemophilus parasuis SH0165] gi|254764635|sp|B8F3C9|RECO_HAEPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219690608|gb|ACL31831.1| recombinational DNA repair protein (RecF pathway) [Haemophilus parasuis SH0165] Length = 239 Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 11/162 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ +L R Y E +++++ T +GR + + R ++ +LQ + + W Sbjct: 5 WQR-GFVLHRREYSESSLLVDFFTENHGRITLLAKGVRRPRSPLKSVLQPFTPLLLKWTG 63 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYD-MLNIF 117 + G+ + E L +L LY G L R L EL+ L+ Sbjct: 64 K-----GDLKTLTKAEPASLTLPMQTLALYSGFYVNEVLARVLENHTAYPELFQHYLHCM 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 P+ I I E LK +G+G+D C TG D Sbjct: 119 TKLASQPNEIEPILRTFEFQTLKALGYGVDFCHCAATGKPVD 160 >gi|209695941|ref|YP_002263871.1| DNA repair protein RecO [Aliivibrio salmonicida LFI1238] gi|238058640|sp|B6EKM7|RECO_ALISL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|208009894|emb|CAQ80207.1| DNA repair protein RecO (recombination protein O) [Aliivibrio salmonicida LFI1238] Length = 238 Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 23/158 (14%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNL 66 +L R Y E ++IL+V + +YGR + +S R ++ +LQA + + W + Sbjct: 10 VLHRRPYSESSLILDVFSEEYGRLSIISKGARSKRSNLKGVLQAFTPLLMKWSGK----- 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY-DMLNIF-- 117 G R A+ +S ++ L G+ L+ R + + P L+ D L Sbjct: 65 GSMR----TLRQAETISLAIPLTGINLYSALYINELVVRVIEQETPYPALFLDYLTALTE 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L K P + F EL LL ++G+G+D C +G Sbjct: 121 LAQTKNPEPALRRF---ELALLSSLGYGVDFLHCAGSG 155 >gi|52081074|ref|YP_079865.1| DNA repair protein RecO [Bacillus licheniformis ATCC 14580] gi|52786454|ref|YP_092283.1| DNA repair protein RecO [Bacillus licheniformis ATCC 14580] gi|319644967|ref|ZP_07999200.1| DNA repair protein recO [Bacillus sp. BT1B_CT2] gi|81609046|sp|Q65H74|RECO_BACLD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52004285|gb|AAU24227.1| RecO [Bacillus licheniformis ATCC 14580] gi|52348956|gb|AAU41590.1| RecO [Bacillus licheniformis ATCC 14580] gi|317392776|gb|EFV73570.1| DNA repair protein recO [Bacillus sp. BT1B_CT2] Length = 256 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 17/181 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ---SHRMQPILQAGNLVRVN 57 M + + I+L YGE N I+ ++TR++G+ +G + G + R+ I Q + + Sbjct: 1 MLTKCEGIVLRTNDYGETNKIITLLTREHGK-IGVLARGAKKPNSRLSAISQP--FLYAS 57 Query: 58 WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDML 114 + R + LG + E++ES + + LFL + + + + E++P L+++L Sbjct: 58 FLFRKSSGLGTLEQGEMIES--MRNIREDLFLTAYAAYIAELIDKGTEEKKPNPFLFELL 115 Query: 115 ---NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 LN P +I + IE+ +L +G +L +CV S + G + Sbjct: 116 LQSMRRLNDGTDPDIIANL---IEVKMLSVMGLYPELDECVHCKSKDGTFHFSIRDNGFI 172 Query: 172 C 172 C Sbjct: 173 C 173 >gi|169351080|ref|ZP_02868018.1| hypothetical protein CLOSPI_01859 [Clostridium spiroforme DSM 1552] gi|169292142|gb|EDS74275.1| hypothetical protein CLOSPI_01859 [Clostridium spiroforme DSM 1552] Length = 250 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 37/184 (20%), Positives = 79/184 (42%), Gaps = 31/184 (16%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + ++L + Y E ++++ + T+ YG+ R + + + N + + Sbjct: 12 EGLVLKNKPYKESDMLVWIYTKTYGKMALIARGVKKMKSK-----------NAPACQTIS 60 Query: 66 LGEFRFEVLESHCAKLLSSSLF-------------LYGLQSIVPLFRFLPEREPCLELYD 112 LGE+ F + + L+ S+ Y I +++++ + +P E Y+ Sbjct: 61 LGEYLF-IPRKGLSTLIKGSVIDYFVHIKEDIELEAYASYFIEYVYKYILDNDPDEECYN 119 Query: 113 MLNI---FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L + +LN P ++ +F +LK G L++ +C V G + + +S SGG Sbjct: 120 NLLLALKYLNSGYDPRLVYLLF---NAYILKATGCALEVEQCSVCGDSSHIAGISISSGG 176 Query: 170 AVCR 173 VC+ Sbjct: 177 FVCK 180 >gi|293364584|ref|ZP_06611305.1| recombination protein O [Streptococcus oralis ATCC 35037] gi|307702836|ref|ZP_07639784.1| DNA repair protein RecO [Streptococcus oralis ATCC 35037] gi|291316842|gb|EFE57274.1| recombination protein O [Streptococcus oralis ATCC 35037] gi|307623516|gb|EFO02505.1| DNA repair protein RecO [Streptococcus oralis ATCC 35037] Length = 256 Score = 35.8 bits (81), Expect = 4.6, Method: Compositional matrix adjust. Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 32/215 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ + Sbjct: 9 GLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRINDDG 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIV---------------PLFRFLPEREPCLELY 111 + + E ++S LF+ + V PLF FL LEL Sbjct: 67 LSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFL---RKTLELM 123 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 + + V+ IF E+ +L G L+ +CV S K G + Sbjct: 124 EAGIDY-------QVLTNIF---EIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACL 173 Query: 172 CRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 C ++ + P+ +L + Q ID ++L++ Sbjct: 174 CPDHYHEDEKRCHLNPNIPYLLNQFQAIDFETLET 208 >gi|123441365|ref|YP_001005352.1| DNA repair protein RecO [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166221916|sp|A1JKK5|RECO_YERE8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|122088326|emb|CAL11117.1| DNA repair protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 241 Score = 35.8 bits (81), Expect = 4.6, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 25/226 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQR-AFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWTG 62 Query: 61 RLAQNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 R GE + L S A L+ S+ GL L R L + L+ D L+ Sbjct: 63 R-----GEVK--TLRSAEPVSLALPLTGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLH 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 + Q EL +L ++G+G+D C +G V+ + + + G + Sbjct: 116 CLQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIAS 175 Query: 174 SVGLPYA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V Y+ ++L L + DAD+L++A + T L Y Sbjct: 176 LVVDHYSFTGRQLLAL-----ANREFPDADTLRAAKRFTRIALKPY 216 >gi|163802960|ref|ZP_02196847.1| DNA repair protein RecO [Vibrio sp. AND4] gi|159173250|gb|EDP58078.1| DNA repair protein RecO [Vibrio sp. AND4] Length = 243 Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 35/226 (15%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARSKRSNLKGALQPFTPLLLKWS------ 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY-DMLNIFL 118 G+ + L A+ +S L L+G+ ++ R L P L+ D L+ Sbjct: 67 -GKSSMKTLRQ--AEAISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALT 123 Query: 119 ----NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGG--A 170 N + P++ + EL LL ++G+G+D C TG V ++ + + G A Sbjct: 124 ELAQNDNPEPAL-----RRFELALLSSLGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIA 178 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 R L + L+ S E + + + LK+A + T L Y Sbjct: 179 SVRRDNLTFLGNELIAIS----ERRFVTKEQLKAAKRFTRVALKPY 220 >gi|331265463|ref|YP_004325093.1| DNA repair protein RecO [Streptococcus oralis Uo5] gi|326682135|emb|CBY99751.1| DNA repair protein RecO [Streptococcus oralis Uo5] Length = 256 Score = 35.8 bits (81), Expect = 5.0, Method: Compositional matrix adjust. Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 32/215 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R++ E + ++++ T Q G+ + F+++ ++ P++Q LV + R+ + Sbjct: 9 GLVLYNRNFREDDKLVKIFTEQAGKRMFFIKHAGQSKLAPVIQP--LVLARFLLRINDDG 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIV---------------PLFRFLPEREPCLELY 111 + + E ++S LF+ + V PLF FL + LEL Sbjct: 67 LSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDSPLFAFL---KKTLELM 123 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 + + V+ IF E+ +L G L+ +CV S K G + Sbjct: 124 EAGIDY-------QVLTNIF---EIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACL 173 Query: 172 CRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 C ++ + P+ +L + Q ID ++L++ Sbjct: 174 CPDHYHEDEKRCHLNPNIPYLLNQFQAIDFETLET 208 >gi|212710661|ref|ZP_03318789.1| hypothetical protein PROVALCAL_01727 [Providencia alcalifaciens DSM 30120] gi|212686742|gb|EEB46270.1| hypothetical protein PROVALCAL_01727 [Providencia alcalifaciens DSM 30120] Length = 241 Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust. Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 21/238 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR------MQPILQAGNLVRV 56 WQ A +L R Y E +++++ T G+ + + +R +QP L+R Sbjct: 4 WQR-AFVLHSRPYSETSLLIDFFTEGEGKIRLLAKGARRNRSPLRGCLQPFTPL--LIRW 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + + + +L S L+L L + V F P + + L + Sbjct: 61 SGKGEIKTLINADPVSLALPLSGTVLYSGLYLNELTARVIEFG-TPYSSLFFDYLNCLQV 119 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRS 174 + P Q EL LL +G+G+D C +G VT + + + G + Sbjct: 120 LAGSERTPE---SALRQFELALLSYLGYGVDFLHCAGSGEPVTDAMTYRYREEKGFIGSL 176 Query: 175 V--GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 V L + K L E + DAD+LK+A + T L Y + L R+ Sbjct: 177 VIDQLTFTGKQLK----ALAEREFPDADTLKAAKRFTRIALKPYLGGKPLKSRELFRQ 230 >gi|225182108|ref|ZP_03735536.1| DNA repair protein RecO [Dethiobacter alkaliphilus AHT 1] gi|225167195|gb|EEG76018.1| DNA repair protein RecO [Dethiobacter alkaliphilus AHT 1] Length = 247 Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 1/171 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + AI+L R Y E + ++ ++TR G+ R + + + L ++ R Sbjct: 4 MRSPAIVLRGRDYREADRLVTLLTRDAGKVTVVARGTKKTKSKFSALVEPLTLGHFLLRR 63 Query: 63 AQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++L + E+++ + + LF Y R LPE EP + ++ +L L Sbjct: 64 GKSLDTLIQGEIIKPYNSLRKDLLLFTYAQYFCEVCERSLPENEPAVPVFTLLLTALETL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + ++ EL LL +GF L C G +P GG +C Sbjct: 124 ETEADSARVARCFELNLLDELGFRPVLDACCTCGTATGPFLFTPGHGGLLC 174 >gi|167854944|ref|ZP_02477719.1| DNA repair protein RecO [Haemophilus parasuis 29755] gi|167853901|gb|EDS25140.1| DNA repair protein RecO [Haemophilus parasuis 29755] Length = 239 Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 11/162 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ +L R Y E +++++ T +GR + + R ++ +LQ + + W Sbjct: 5 WQR-GFVLHRREYSESSLLVDFFTENHGRITLLAKGVRRPRSPLKSVLQPFTPLLLKWTG 63 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYD-MLNIF 117 + G+ + E L +L LY G L R L EL+ L Sbjct: 64 K-----GDLKTLTKAEPASLTLPMQTLALYSGFYVNEVLARVLENHTAYPELFQHYLQCM 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 P+ I I E LK +G+G+D C TG D Sbjct: 119 TKLASQPNEIEPILRTFEFQTLKALGYGVDFCHCAATGKPVD 160 >gi|284006741|emb|CBA71998.1| DNA repair protein [Arsenophonus nasoniae] Length = 237 Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 27/227 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + +S R ++ LQ + + W Sbjct: 4 WQR-AFVLHTRPYSETSLLLDFFTENEGRIRLLAKGARSRRSNLKGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFR-------FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + GE + + +L S L++ L + V L + +P + E Sbjct: 63 K-----GEMKTLRSAEPISLALPFTGTVLYSGLYVNELLARV-LAQNIPYQSLFFEYLTC 116 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAV 171 L I P + F EL LL ++G+G+D C +G V + + + G + Sbjct: 117 LQILAGSESTPEHALRRF---ELSLLSHLGYGVDFLHCSGSGEPVINGMTYRYREEKGFI 173 Query: 172 CRSV--GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 V L + K L +F +E D D+LK+A + T L Y Sbjct: 174 ASLVIDHLSFTGKQ--LKAFACREFP--DVDTLKAAKRFTRIALKPY 216 >gi|21242080|ref|NP_641662.1| DNA repair protein RecO [Xanthomonas axonopodis pv. citri str. 306] gi|42559487|sp|Q8PMU8|RECO_XANAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|21107487|gb|AAM36198.1| DNA repair protein [Xanthomonas axonopodis pv. citri str. 306] Length = 240 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 12/146 (8%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWRSRLAQN 65 +L VR++ E ++++EV+T Q+GR R Q R Q + LQ L++ + R Sbjct: 10 VLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQFSAVQR--GE 67 Query: 66 LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN--CHK 122 L + R E L++ A L+ L G L R P +P ELY Sbjct: 68 LAQLRQAEALDT--APRLAGDTMLAGFYIGELLLRLAPRHDPVPELYACYAQARRHLASD 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 +P G + E +L+ +GF DL Sbjct: 126 LPLAWG--LRRFERDVLEGLGFAFDL 149 >gi|260551501|ref|ZP_05825685.1| DNA repair protein RecO [Acinetobacter sp. RUH2624] gi|260405495|gb|EEW98988.1| DNA repair protein RecO [Acinetobacter sp. RUH2624] Length = 237 Score = 35.4 bits (80), Expect = 6.0, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 19/145 (13%) Query: 13 RSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-LQAGNLVRVNWRSRLAQNLGEFRF 71 R Y EK+ I+ + T++YGR G +R + QPI LQA + ++L Sbjct: 15 RKYREKSHIVHLFTQEYGRVDGILRQTPPPQYQPIRLQATGKSELKNFTKL--------- 65 Query: 72 EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLNCHKIPS 125 E+L + + L IV R P EP + ++ + L+ H+ P Sbjct: 66 EILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEPMPQTFEQYQLTLLQLQQLSSHENPD 123 Query: 126 V-IGKIFVQIELMLLKNIGFGLDLT 149 + + +I Q E +LL +G+ +D + Sbjct: 124 LFLRQILRQFEHILLPELGYAIDFS 148 >gi|294664537|ref|ZP_06729882.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605699|gb|EFF49005.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 240 Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 12/146 (8%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWRSRLAQN 65 +L VR++ E ++++EV+T Q+GR R Q R Q + LQ L++ + R Sbjct: 10 VLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQFSAVQR--GE 67 Query: 66 LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN--CHK 122 L + R + L++ A L+ L G L R P +P ELY + Sbjct: 68 LAQLRQADALDT--APRLAGDTMLAGFYISELLLRLAPRNDPVPELYACYAQVRSHLASD 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 +P G + E +L+ +GF DL Sbjct: 126 LPLAWG--LRRFERDVLEGLGFAFDL 149 >gi|238897757|ref|YP_002923436.1| gap repair protein, part of RecFOR complex [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259563680|sp|C4K3Z5|RECO_HAMD5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229465514|gb|ACQ67288.1| gap repair protein, part of RecFOR complex [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 234 Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 13/160 (8%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR------MQPILQAGNLVR 55 +W + IL RSY E ++IL+++T GR + R +QP L+R Sbjct: 4 HWHR-SFILHRRSYSETSLILDLLTENEGRISLIAKGALRPRSALKGYLQPFTPL--LLR 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + +S + G + L S L++ L S + LP + +D L+ Sbjct: 61 WSGKSAIKTLCGAEPISIAVPLTGIFLYSGLYVNELLSRL----LLPNIDYRALFFDYLD 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + EL LL ++G+G+D CV TG Sbjct: 117 CLEALASAQDTSERALRRFELALLTHLGYGVDFLHCVETG 156 >gi|78046935|ref|YP_363110.1| DNA repair protein RecO [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325926992|ref|ZP_08188267.1| DNA replication and repair protein RecO [Xanthomonas perforans 91-118] gi|90103527|sp|Q3BVV3|RECO_XANC5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78035365|emb|CAJ23010.1| putative DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542651|gb|EGD14118.1| DNA replication and repair protein RecO [Xanthomonas perforans 91-118] Length = 240 Score = 35.0 bits (79), Expect = 7.7, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 14/147 (9%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWRSRLAQN 65 +L VR++ E ++++EV+T Q+GR R Q R Q + LQ L++ + R Sbjct: 10 VLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQFSAVQR--GE 67 Query: 66 LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL---YDMLNIFLNCH 121 L + R E L++ A L L G L R P +P EL Y +L Sbjct: 68 LAQLRQAEALDT--APRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYAQARTYL-AS 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDL 148 +P G + E +L +GF DL Sbjct: 125 DLPLAWG--LRRFERDVLDGLGFAFDL 149 >gi|239501069|ref|ZP_04660379.1| DNA repair protein RecO [Acinetobacter baumannii AB900] Length = 237 Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 15/143 (10%) Query: 13 RSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-LQAGNLVRVNWRSRLAQNLGEFRF 71 R Y EK+ I+ + T++YGR G +R + QPI LQA + ++L Sbjct: 15 RKYREKSHIVHLFTQEYGRVDGILRQTPPPQYQPIRLQATGKSELKNFTKL--------- 65 Query: 72 EVLESHCAKLLSSSLFLYGLQSIV----PLFRFLPEREPCLELYDMLNIFLNCHKIPSV- 126 E+L + + L IV PL +P+ +L + L+ H+ P + Sbjct: 66 EILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHENPDLF 125 Query: 127 IGKIFVQIELMLLKNIGFGLDLT 149 + +I Q E +LL +G+ LD + Sbjct: 126 LRQILRQFEHILLAELGYALDFS 148 >gi|95929740|ref|ZP_01312481.1| DNA repair protein RecO [Desulfuromonas acetoxidans DSM 684] gi|95134036|gb|EAT15694.1| DNA repair protein RecO [Desulfuromonas acetoxidans DSM 684] Length = 251 Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L YGE + I+ ++TR +G F RN +S R + L + +R+ W++R Sbjct: 7 EAIVLRCTDYGEADRIVTLLTRDHGICGAFARNARSSRRRFGGALHPFSRLRITWQTRRR 66 Query: 64 QNLGEF-RFEVLESH---CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 L + E+L+ L +L YG + I+ L+ PE + E+YD+L FL Sbjct: 67 GGLPQLAEVELLDGAHGLMTNLDGMALAAYGCELIMALW---PEEQAIPEVYDLLRSFL 122 >gi|319787578|ref|YP_004147053.1| DNA repair protein RecO [Pseudoxanthomonas suwonensis 11-1] gi|317466090|gb|ADV27822.1| DNA repair protein RecO [Pseudoxanthomonas suwonensis 11-1] Length = 244 Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 12/148 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG--NLVRVNWRSRLAQ 64 A +L R + E ++++EV++ +GR LG V G + +L+A L + + + LA Sbjct: 8 AFVLHARPWRETSLLVEVLSEGHGR-LGLVARGVGSPKRQVLRAALQPLQHIRFDAVLAG 66 Query: 65 NLGEFR-FEVLESH---CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + R E L+S C ++ ++ +L L + R P ++P +L+D Sbjct: 67 ELAQLRGAEALDSAPRLCGQVQLAAFYLNEL-----VLRLAPRQDPLPDLFDAYARTRAA 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E LL +G G +L Sbjct: 122 LVEGGSLAWTLRRFERDLLGALGVGFEL 149 >gi|114567078|ref|YP_754232.1| DNA repair protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|119361496|sp|Q0AWP3|RECO_SYNWW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114338013|gb|ABI68861.1| DNA replication and repair protein RecO [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 250 Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 8/90 (8%) Query: 135 ELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR------SVGLPYAEKMLVLPS 188 E+ LL N+G+ L CV+ G DL S GG +CR S + +++ L L S Sbjct: 136 EMNLLVNLGYSPLLDHCVLCGKKDDLKVFSLPDGGMLCRDCSYQASGAVSLSKETLALIS 195 Query: 189 FLWKEE-QTIDADSLKSAFQLT-DYFLNKY 216 L + T++ + + Q +YFL KY Sbjct: 196 LLGRSRLATVERVRVSNKAQKELEYFLEKY 225 >gi|28899344|ref|NP_798949.1| DNA repair protein RecO [Vibrio parahaemolyticus RIMD 2210633] gi|260365943|ref|ZP_05778433.1| DNA repair protein RecO [Vibrio parahaemolyticus K5030] gi|260878965|ref|ZP_05891320.1| DNA repair protein RecO [Vibrio parahaemolyticus AN-5034] gi|260898318|ref|ZP_05906814.1| DNA repair protein RecO [Vibrio parahaemolyticus Peru-466] gi|260899639|ref|ZP_05908034.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ4037] gi|31340321|sp|Q87LP1|RECO_VIBPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28807580|dbj|BAC60833.1| DNA repair protein RecO [Vibrio parahaemolyticus RIMD 2210633] gi|308085237|gb|EFO34932.1| DNA repair protein RecO [Vibrio parahaemolyticus Peru-466] gi|308090490|gb|EFO40185.1| DNA repair protein RecO [Vibrio parahaemolyticus AN-5034] gi|308110552|gb|EFO48092.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ4037] gi|308113207|gb|EFO50747.1| DNA repair protein RecO [Vibrio parahaemolyticus K5030] gi|328474123|gb|EGF44928.1| DNA repair protein RecO [Vibrio parahaemolyticus 10329] Length = 243 Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 33/224 (14%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNL 66 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W Sbjct: 14 VLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWS------- 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY----DMLNI 116 G+ + L A+ +S L L+G+ ++ R L P L+ L Sbjct: 67 GKGSMKTLRQ--AEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTE 124 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGG--AVC 172 C + + EL LL ++G+G+D C TG V ++ + + G A Sbjct: 125 LAQCENPEPALRR----FELALLSSMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASV 180 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 R L + L+ S E + + + LK+A + T L Y Sbjct: 181 RRDNLTFLGNELIAIS----ERRFVTKEQLKAAKRFTRIALKPY 220 >gi|119476419|ref|ZP_01616770.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2143] gi|119450283|gb|EAW31518.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2143] Length = 239 Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 26/162 (16%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFV------------RNGQSHRMQPILQAGNLV 54 A IL R++ + ++I++ ++ YGR G V R G S P+L Sbjct: 8 AYILHTRNFRDSSLIVDFLSADYGRVSGVVKGVRATSKSAKQRRGLSQPFVPLL------ 61 Query: 55 RVNWRSRLAQNLGEFRFEV-LESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 ++W + + + + +E A L L GL L R L + + +Y Sbjct: 62 -ISWSGK-----SDLKTIIQMEPRGAPLQLQGKRLFSGLYVNELLSRLLQQDDQHTAIYT 115 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + C S I + Q EL L++ +G+GLD T+ T Sbjct: 116 LYEWIAKCLVGDSEIDIVLRQFELQLMEYLGYGLDFTQEAET 157 Searching..................................................done Results from round 2 >gi|239831498|ref|ZP_04679827.1| DNA repair protein RecO [Ochrobactrum intermedium LMG 3301] gi|239823765|gb|EEQ95333.1| DNA repair protein RecO [Ochrobactrum intermedium LMG 3301] Length = 245 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 152/241 (63%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + I+EVMTR++GRH+G VR G+S RMQP+LQ GN V V W + Sbjct: 3 MEWRDEGIILGTRRHGETSAIVEVMTREHGRHMGMVRGGRSRRMQPLLQPGNHVDVTWWA 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 63 RLDEHMGSFTIEPLEFAAARLIETPVALYGIQLAASHLRLLPERDPHRGLYETLRLIIEH 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TGV +DL++VSPKSG AVCR VG P+A Sbjct: 123 FDDPLASGELVLRFEVMMLEELGFGLDLKECAATGVKEDLIYVSPKSGRAVCREVGAPWA 182 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L+LP F+ + D + AF +T YFL ++ + I R FL L Sbjct: 183 DKLLLLPGFVNNTAVRAASYDDIDHAFTMTGYFLMRHVWEPRAITPPDARGGFLNALGRA 242 Query: 240 I 240 I Sbjct: 243 I 243 >gi|153009952|ref|YP_001371167.1| DNA repair protein RecO [Ochrobactrum anthropi ATCC 49188] gi|151561840|gb|ABS15338.1| DNA repair protein RecO [Ochrobactrum anthropi ATCC 49188] Length = 243 Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 105/241 (43%), Positives = 151/241 (62%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + I+EVMTR++GRH+G VR G+S RMQP+LQ GN V V W + Sbjct: 1 MEWRDEGIILGTRRHGETSAIVEVMTREHGRHMGMVRGGRSRRMQPLLQPGNHVDVTWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGSFTIEPLEFAAARLIETPVALYGIQLAASHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL KC TGV +DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLASGELVLRFEVMMLEELGFGLDLKKCAATGVKEDLIYVSPKSGRAVCRDAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L+LP F+ + D + AF +T YFL ++ + + R FL L Sbjct: 181 DKLLLLPGFVNNTAVRASSYDDIDHAFTMTGYFLMRHVWEPRAVTPPDARGGFLNALGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|86357032|ref|YP_468924.1| DNA repair protein RecO [Rhizobium etli CFN 42] gi|119361475|sp|Q2KAD9|RECO_RHIEC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86281134|gb|ABC90197.1| DNA repair protein [Rhizobium etli CFN 42] Length = 256 Score = 345 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S M+P+LQ GN V V WR+ Sbjct: 1 MQWQDQAIILGVKRHGETSVIAEVMTRGRGRHLGLVRSGRSRAMRPVLQPGNAVEVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMDTATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADVDSLAAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|218461899|ref|ZP_03501990.1| DNA repair protein RecO [Rhizobium etli Kim 5] Length = 256 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVDGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEASAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|327191326|gb|EGE58359.1| DNA repair protein (recombination protein O) [Rhizobium etli CNPAF512] Length = 281 Score = 344 bits (882), Expect = 8e-93, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 26 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 85 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 86 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 145 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 146 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 205 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 206 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 265 Query: 240 I 240 + Sbjct: 266 L 266 >gi|241203893|ref|YP_002974989.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857783|gb|ACS55450.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 256 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL++VSPKSG AV R+ G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLVYVSPKSGRAVSRAAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D +SL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLRIEGNHAADFESLSAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|254780948|ref|YP_003065361.1| DNA repair protein RecO [Candidatus Liberibacter asiaticus str. psy62] gi|254040625|gb|ACT57421.1| DNA repair protein RecO [Candidatus Liberibacter asiaticus str. psy62] Length = 240 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS Sbjct: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC Sbjct: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA Sbjct: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI Sbjct: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 >gi|116251281|ref|YP_767119.1| DNA repair protein RecO [Rhizobium leguminosarum bv. viciae 3841] gi|119361476|sp|Q1MJ50|RECO_RHIL3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115255929|emb|CAK07010.1| putative DNA repair protein (recombination protein O) [Rhizobium leguminosarum bv. viciae 3841] Length = 256 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL++VSPKSG AV R+ G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLVYVSPKSGRAVSRAAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLSIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|209548606|ref|YP_002280523.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238058646|sp|B5ZW78|RECO_RHILW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209534362|gb|ACI54297.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 256 Score = 340 bits (874), Expect = 6e-92, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLGIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|222085393|ref|YP_002543923.1| DNA repair protein RecO [Agrobacterium radiobacter K84] gi|254790503|sp|B9JC76|RECO_AGRRK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|221722841|gb|ACM25997.1| DNA repair protein RecO [Agrobacterium radiobacter K84] Length = 259 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ GE ++I EVMTR GRH+G VR+G+S MQP+LQ GNLV V WR+ Sbjct: 1 MQWQDHAIILGVKRLGETSVIAEVMTRDRGRHMGLVRSGRSRSMQPVLQPGNLVEVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P LYD L++ L Sbjct: 61 RLHEHLGEFRMEPVRLRAARLMETATAVYGVQAMGALLRLLPERDPHPYLYDALDVILEN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P G++FV+ EL +L +G+GLDL +C TGV DL +VSPK+G AVCR+ G P+A Sbjct: 121 MQNPMDAGELFVRFELAVLNELGYGLDLGECAATGVRDDLAFVSPKTGRAVCRTAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML LP FL + + +SL +AF+LT +FL+++ + I RE F+ L+ Sbjct: 181 DKMLALPPFLAAGTVEAANGESLAAAFRLTGFFLHRHVYEPRGIEIAAAREGFIQAALKA 240 Query: 240 I 240 + Sbjct: 241 V 241 >gi|190891077|ref|YP_001977619.1| DNA repair protein (recombination protein O) [Rhizobium etli CIAT 652] gi|238692513|sp|B3PUP2|RECO_RHIE6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190696356|gb|ACE90441.1| DNA repair protein (recombination protein O) [Rhizobium etli CIAT 652] Length = 256 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|20139557|sp|Q92KH5|RECO_RHIME RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 247 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 1 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 61 RLDEHLGEFRVEPLQLRAASLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 121 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 181 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 240 >gi|163760593|ref|ZP_02167674.1| DNA repair protein [Hoeflea phototrophica DFL-43] gi|162282208|gb|EDQ32498.1| DNA repair protein [Hoeflea phototrophica DFL-43] Length = 256 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 101/241 (41%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG+R +GE ++I EVMT +GRH+G VR G+S R+QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGLRKHGETSVIAEVMTHAHGRHMGIVRGGRSKRLQPVLQPGNSVDLVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+++ E++ + +L+ S++ ++G+Q++ L R LPER+ L+D + L+ Sbjct: 61 RLDEHLGQYQVELINARAGRLMQSAIGVHGVQAMAALLRLLPERDSHPRLHDAFAVILDS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G ++V+ EL +L+++GFGLDLT C TG ++DL++VSPKSG AV + G P+A Sbjct: 121 FDAPEEAGALYVRFELAVLEDLGFGLDLTACAATGASEDLVYVSPKSGRAVSAAAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTI-DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 E+ML LP+FL Q DA L F+L+ YFL+++ + I + RE+F L+ Sbjct: 181 ERMLALPAFLADRSQACGDAQMLAHGFKLSGYFLDRHVFEPRGIEAPISRESFCTAALKA 240 Query: 240 I 240 + Sbjct: 241 M 241 >gi|307320728|ref|ZP_07600140.1| DNA repair protein RecO [Sinorhizobium meliloti AK83] gi|306893655|gb|EFN24429.1| DNA repair protein RecO [Sinorhizobium meliloti AK83] Length = 259 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 165/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 13 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 73 RLDEHLGEFRVEPLQLRAARLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 132 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 133 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 192 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 193 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 252 >gi|254718804|ref|ZP_05180615.1| DNA repair protein RecO [Brucella sp. 83/13] gi|265983786|ref|ZP_06096521.1| DNA repair protein recO [Brucella sp. 83/13] gi|264662378|gb|EEZ32639.1| DNA repair protein recO [Brucella sp. 83/13] Length = 247 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 101/241 (41%), Positives = 146/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LPSF+ + D L AF +T YFL ++ + R FL + Sbjct: 181 DKLLALPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|218509904|ref|ZP_03507782.1| DNA repair protein RecO [Rhizobium etli Brasil 5] Length = 245 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|195970186|ref|NP_385194.3| DNA repair protein RecO [Sinorhizobium meliloti 1021] gi|307300911|ref|ZP_07580680.1| DNA repair protein RecO [Sinorhizobium meliloti BL225C] gi|15074020|emb|CAC45667.1| Recombinational DNA repair protein (RecF pathway) [Sinorhizobium meliloti 1021] gi|306903866|gb|EFN34452.1| DNA repair protein RecO [Sinorhizobium meliloti BL225C] Length = 259 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 13 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 73 RLDEHLGEFRVEPLQLRAASLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 132 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 133 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 192 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 193 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 252 >gi|163842935|ref|YP_001627339.1| DNA repair protein RecO [Brucella suis ATCC 23445] gi|163673658|gb|ABY37769.1| DNA repair protein RecO [Brucella suis ATCC 23445] Length = 247 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 146/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ + D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|23501551|ref|NP_697678.1| DNA repair protein RecO [Brucella suis 1330] gi|62289624|ref|YP_221417.1| DNA repair protein RecO [Brucella abortus bv. 1 str. 9-941] gi|82699552|ref|YP_414126.1| DNA repair protein RecO [Brucella melitensis biovar Abortus 2308] gi|148559418|ref|YP_001258648.1| DNA repair protein RecO [Brucella ovis ATCC 25840] gi|161618634|ref|YP_001592521.1| DNA repair protein RecO [Brucella canis ATCC 23365] gi|189023877|ref|YP_001934645.1| DNA repair protein RecO [Brucella abortus S19] gi|225852185|ref|YP_002732418.1| DNA repair protein RecO [Brucella melitensis ATCC 23457] gi|237815119|ref|ZP_04594117.1| DNA repair protein RecO [Brucella abortus str. 2308 A] gi|254688939|ref|ZP_05152193.1| DNA repair protein RecO [Brucella abortus bv. 6 str. 870] gi|254693421|ref|ZP_05155249.1| DNA repair protein RecO [Brucella abortus bv. 3 str. Tulya] gi|254697074|ref|ZP_05158902.1| DNA repair protein RecO [Brucella abortus bv. 2 str. 86/8/59] gi|254701451|ref|ZP_05163279.1| DNA repair protein RecO [Brucella suis bv. 5 str. 513] gi|254703997|ref|ZP_05165825.1| DNA repair protein RecO [Brucella suis bv. 3 str. 686] gi|254707629|ref|ZP_05169457.1| DNA repair protein RecO [Brucella pinnipedialis M163/99/10] gi|254709789|ref|ZP_05171600.1| DNA repair protein RecO [Brucella pinnipedialis B2/94] gi|254713791|ref|ZP_05175602.1| DNA repair protein RecO [Brucella ceti M644/93/1] gi|254717152|ref|ZP_05178963.1| DNA repair protein RecO [Brucella ceti M13/05/1] gi|254729970|ref|ZP_05188548.1| DNA repair protein RecO [Brucella abortus bv. 4 str. 292] gi|256031279|ref|ZP_05444893.1| DNA repair protein RecO [Brucella pinnipedialis M292/94/1] gi|256060791|ref|ZP_05450953.1| DNA repair protein RecO [Brucella neotomae 5K33] gi|256113203|ref|ZP_05454071.1| DNA repair protein RecO [Brucella melitensis bv. 3 str. Ether] gi|256257187|ref|ZP_05462723.1| DNA repair protein RecO [Brucella abortus bv. 9 str. C68] gi|256264305|ref|ZP_05466837.1| recombination protein O [Brucella melitensis bv. 2 str. 63/9] gi|256369101|ref|YP_003106609.1| DNA repair protein RecO [Brucella microti CCM 4915] gi|260545621|ref|ZP_05821362.1| recombination protein O [Brucella abortus NCTC 8038] gi|260566756|ref|ZP_05837226.1| recombination protein O [Brucella suis bv. 4 str. 40] gi|260754426|ref|ZP_05866774.1| DNA repair protein recO [Brucella abortus bv. 6 str. 870] gi|260757645|ref|ZP_05869993.1| DNA repair protein recO [Brucella abortus bv. 4 str. 292] gi|260761472|ref|ZP_05873815.1| DNA repair protein recO [Brucella abortus bv. 2 str. 86/8/59] gi|260883454|ref|ZP_05895068.1| DNA repair protein recO [Brucella abortus bv. 9 str. C68] gi|261213672|ref|ZP_05927953.1| DNA repair protein recO [Brucella abortus bv. 3 str. Tulya] gi|261218967|ref|ZP_05933248.1| DNA repair protein recO [Brucella ceti M13/05/1] gi|261315121|ref|ZP_05954318.1| DNA repair protein recO [Brucella pinnipedialis M163/99/10] gi|261317324|ref|ZP_05956521.1| DNA repair protein recO [Brucella pinnipedialis B2/94] gi|261321534|ref|ZP_05960731.1| DNA repair protein recO [Brucella ceti M644/93/1] gi|261324782|ref|ZP_05963979.1| DNA repair protein recO [Brucella neotomae 5K33] gi|261751991|ref|ZP_05995700.1| DNA repair protein recO [Brucella suis bv. 5 str. 513] gi|261754650|ref|ZP_05998359.1| DNA repair protein recO [Brucella suis bv. 3 str. 686] gi|265988362|ref|ZP_06100919.1| DNA repair protein recO [Brucella pinnipedialis M292/94/1] gi|265994611|ref|ZP_06107168.1| DNA repair protein recO [Brucella melitensis bv. 3 str. Ether] gi|297248035|ref|ZP_06931753.1| DNA repair protein RecO [Brucella abortus bv. 5 str. B3196] gi|38258601|sp|Q8G1P8|RECO_BRUSU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|75497079|sp|Q57E78|RECO_BRUAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361447|sp|Q2YMZ9|RECO_BRUA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|23347462|gb|AAN29593.1| DNA repair protein RecO, putative [Brucella suis 1330] gi|62195756|gb|AAX74056.1| putatiave DNA repair protein RecO [Brucella abortus bv. 1 str. 9-941] gi|82615653|emb|CAJ10640.1| Cytochrome P450:Recombination protein O, RecO [Brucella melitensis biovar Abortus 2308] gi|148370675|gb|ABQ60654.1| DNA repair protein RecO [Brucella ovis ATCC 25840] gi|161335445|gb|ABX61750.1| DNA repair protein RecO [Brucella canis ATCC 23365] gi|189019449|gb|ACD72171.1| Recombination protein O, RecO [Brucella abortus S19] gi|225640550|gb|ACO00464.1| DNA repair protein RecO [Brucella melitensis ATCC 23457] gi|237789956|gb|EEP64166.1| DNA repair protein RecO [Brucella abortus str. 2308 A] gi|255999261|gb|ACU47660.1| DNA repair protein RecO [Brucella microti CCM 4915] gi|260097028|gb|EEW80903.1| recombination protein O [Brucella abortus NCTC 8038] gi|260156274|gb|EEW91354.1| recombination protein O [Brucella suis bv. 4 str. 40] gi|260667963|gb|EEX54903.1| DNA repair protein recO [Brucella abortus bv. 4 str. 292] gi|260671904|gb|EEX58725.1| DNA repair protein recO [Brucella abortus bv. 2 str. 86/8/59] gi|260674534|gb|EEX61355.1| DNA repair protein recO [Brucella abortus bv. 6 str. 870] gi|260872982|gb|EEX80051.1| DNA repair protein recO [Brucella abortus bv. 9 str. C68] gi|260915279|gb|EEX82140.1| DNA repair protein recO [Brucella abortus bv. 3 str. Tulya] gi|260924056|gb|EEX90624.1| DNA repair protein recO [Brucella ceti M13/05/1] gi|261294224|gb|EEX97720.1| DNA repair protein recO [Brucella ceti M644/93/1] gi|261296547|gb|EEY00044.1| DNA repair protein recO [Brucella pinnipedialis B2/94] gi|261300762|gb|EEY04259.1| DNA repair protein recO [Brucella neotomae 5K33] gi|261304147|gb|EEY07644.1| DNA repair protein recO [Brucella pinnipedialis M163/99/10] gi|261741744|gb|EEY29670.1| DNA repair protein recO [Brucella suis bv. 5 str. 513] gi|261744403|gb|EEY32329.1| DNA repair protein recO [Brucella suis bv. 3 str. 686] gi|262765724|gb|EEZ11513.1| DNA repair protein recO [Brucella melitensis bv. 3 str. Ether] gi|263094578|gb|EEZ18376.1| recombination protein O [Brucella melitensis bv. 2 str. 63/9] gi|264660559|gb|EEZ30820.1| DNA repair protein recO [Brucella pinnipedialis M292/94/1] gi|297175204|gb|EFH34551.1| DNA repair protein RecO [Brucella abortus bv. 5 str. B3196] gi|326408685|gb|ADZ65750.1| Recombination protein O, RecO [Brucella melitensis M28] gi|326538410|gb|ADZ86625.1| DNA repair protein RecO [Brucella melitensis M5-90] Length = 247 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 146/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ + D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|150395917|ref|YP_001326384.1| DNA repair protein RecO [Sinorhizobium medicae WSM419] gi|166221910|sp|A6U7B9|RECO_SINMW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150027432|gb|ABR59549.1| DNA repair protein RecO [Sinorhizobium medicae WSM419] Length = 249 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWSDQAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRAMQPVLQPGNSVEVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 61 RLDEHLGEFRVEPLQLRAARLIETATSVYGIQALGSLLRLLPERDPHPHLYEALAVIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 121 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 E+ML LP FL + + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 181 ERMLALPDFLSGQNRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 240 >gi|227821417|ref|YP_002825387.1| DNA repair protein RecO [Sinorhizobium fredii NGR234] gi|227340416|gb|ACP24634.1| DNA repair protein RecO [Sinorhizobium fredii NGR234] Length = 276 Score = 337 bits (866), Expect = 7e-91, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 29 MQWSDQAIILGIRRHGESSVIAEVMTSAHGRHLGLVRSGRSRTMQPVLQPGNSVEVTWRA 88 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E LE A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 89 RLDEHLGEFRLEPLELRAARLMEAATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 148 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPK+G AV R+ G PYA Sbjct: 149 LQDPADAGELFVRFELAVLNDLGFGLDLSECAATGHRAELIYVSPKTGRAVSRAAGAPYA 208 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 E+ML LP FL D DSL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 209 ERMLALPDFLSGTRSAADHDSLAAAFRLTAYFLNRHVYEPRGVDVSSARDGFVHATLKAL 268 >gi|306842071|ref|ZP_07474743.1| DNA repair protein RecO [Brucella sp. BO2] gi|306287821|gb|EFM59244.1| DNA repair protein RecO [Brucella sp. BO2] Length = 247 Score = 337 bits (865), Expect = 7e-91, Method: Composition-based stats. Identities = 100/241 (41%), Positives = 145/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG L++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDGLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LPSF+ + D L AF +T YFL ++ + R FL + Sbjct: 181 DKLLALPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|294852027|ref|ZP_06792700.1| DNA repair protein RecO [Brucella sp. NVSL 07-0026] gi|294820616|gb|EFG37615.1| DNA repair protein RecO [Brucella sp. NVSL 07-0026] Length = 247 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 146/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCWHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ + D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|225627162|ref|ZP_03785200.1| DNA repair protein RecO [Brucella ceti str. Cudo] gi|256159389|ref|ZP_05457171.1| DNA repair protein RecO [Brucella ceti M490/95/1] gi|256254687|ref|ZP_05460223.1| DNA repair protein RecO [Brucella ceti B1/94] gi|260168417|ref|ZP_05755228.1| DNA repair protein RecO [Brucella sp. F5/99] gi|261221865|ref|ZP_05936146.1| DNA repair protein recO [Brucella ceti B1/94] gi|261757878|ref|ZP_06001587.1| recombination protein O [Brucella sp. F5/99] gi|265997829|ref|ZP_06110386.1| DNA repair protein recO [Brucella ceti M490/95/1] gi|225617997|gb|EEH15041.1| DNA repair protein RecO [Brucella ceti str. Cudo] gi|260920449|gb|EEX87102.1| DNA repair protein recO [Brucella ceti B1/94] gi|261737862|gb|EEY25858.1| recombination protein O [Brucella sp. F5/99] gi|262552297|gb|EEZ08287.1| DNA repair protein recO [Brucella ceti M490/95/1] Length = 247 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 146/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGRRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ + D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|17987568|ref|NP_540202.1| DNA repair protein RecO [Brucella melitensis bv. 1 str. 16M] gi|256044360|ref|ZP_05447264.1| DNA repair protein RecO [Brucella melitensis bv. 1 str. Rev.1] gi|260563712|ref|ZP_05834198.1| DNA repair protein recO [Brucella melitensis bv. 1 str. 16M] gi|265990775|ref|ZP_06103332.1| DNA repair protein recO [Brucella melitensis bv. 1 str. Rev.1] gi|20139477|sp|Q8YG76|RECO_BRUME RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|17983272|gb|AAL52466.1| DNA repair protein reco [Brucella melitensis bv. 1 str. 16M] gi|260153728|gb|EEW88820.1| DNA repair protein recO [Brucella melitensis bv. 1 str. 16M] gi|263001559|gb|EEZ14134.1| DNA repair protein recO [Brucella melitensis bv. 1 str. Rev.1] Length = 247 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 101/241 (41%), Positives = 145/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSP SG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPTSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ + D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|325292418|ref|YP_004278282.1| DNA repair protein RecO [Agrobacterium sp. H13-3] gi|325060271|gb|ADY63962.1| DNA repair protein RecO [Agrobacterium sp. H13-3] Length = 254 Score = 334 bits (856), Expect = 8e-90, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 166/241 (68%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD+AIILGV+ +GE ++I EVMTR GRHLG VR G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDEAIILGVKRHGETSVIAEVMTRLRGRHLGMVRGGRSRSMQPVLQAGNRVDVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY L++ L+ Sbjct: 61 RLDDHLGEFRIEPLQLRAAQLMETATAVYGVQAMGALLRLLPERDPHPHLYQALDVILDN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++FV+ EL +L ++GFGLDLT+C TG+ DL++VSPK+G AVC + G PYA Sbjct: 121 LHDPVDAGELFVRFELAVLNDLGFGLDLTECAATGLRTDLIYVSPKTGRAVCSTAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 E+ML LP+FL + + D DSL +AF+LT +FL+++ ++ + R+ F+ L+ Sbjct: 181 ERMLSLPAFLGEGQSKAADRDSLAAAFRLTGHFLHRHVYDPRGLNENAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|260462318|ref|ZP_05810526.1| DNA repair protein RecO [Mesorhizobium opportunistum WSM2075] gi|259031812|gb|EEW33080.1| DNA repair protein RecO [Mesorhizobium opportunistum WSM2075] Length = 258 Score = 334 bits (856), Expect = 8e-90, Method: Composition-based stats. Identities = 103/239 (43%), Positives = 151/239 (63%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEVMTR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVMTRTHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L++ + Sbjct: 61 RLDEHLGTFQAEPIEMNAARLMDSAIAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R GLP+ Sbjct: 121 LDDADAAGELVARFELLILDELGFGLDLSRCAATGTQQDLAYVSPKSGRAVSREAGLPWR 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +KML LP+FL D +++ AF+LT +F ++ + I R FL L + Sbjct: 181 DKMLALPAFLQRGSGLRADPGAVEDAFRLTGFFFTRHVYEPRAIEQPDARLGFLAALRK 239 >gi|15888381|ref|NP_354062.1| DNA repair protein RecO [Agrobacterium tumefaciens str. C58] gi|42559508|sp|Q8UGJ8|RECO_AGRT5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|15156061|gb|AAK86847.1| DNA repair protein RecO [Agrobacterium tumefaciens str. C58] Length = 254 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 166/241 (68%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD+AIILGV+ +GE ++I EVMT GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDEAIILGVKRHGETSVIAEVMTPSRGRHLGMVRSGRSRTMQPVLQAGNRVDVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LGEFR E L+ +L+ ++ +YG+Q++ L R LPER+P LY L++ L+ Sbjct: 61 RLHDHLGEFRIEPLQLRAGQLMETATAVYGVQAMGALLRLLPERDPHPHLYQALDVILDN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++FV+ EL +L ++GFGLDL++C TG+ DL++VSPK+G AVCR+ G PYA Sbjct: 121 LHDPVDAGELFVRFELAVLNDLGFGLDLSECAATGLRSDLIYVSPKTGRAVCRTAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +ML LP+FL + + D +SL +AF+LTD+FL+++ ++ + R+ F+ L+ Sbjct: 181 ARMLALPAFLGEGQSKAADPESLAAAFRLTDHFLHRHVYDPRGLNENAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|240850199|ref|YP_002971592.1| DNA repair protein RecO [Bartonella grahamii as4aup] gi|240267322|gb|ACS50910.1| DNA repair protein RecO [Bartonella grahamii as4aup] Length = 248 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 147/235 (62%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILG R YGE ++ILEVMTR++GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGTRQYGETSVILEVMTREHGRYMGVVKGGRSRRMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ I R LPER+P LYD+L++F+ Sbjct: 61 RLEEHLGLFRLEALDLHAARLICLPEALYALQLIAFHLRLLPERDPHPVLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V ++ V+ E+ LL+ +GFGLDL+ C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDEPFVNAELLVRFEMRLLEELGFGLDLSCCAATGRQERLHYVSPKSGRAVCEEAGEPWK 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L+LP FL + + D+ + + F LT +FL ++ + I +R N + Sbjct: 181 KKLLILPQFLVQRTTRPTDSSDIINGFILTGFFLMRHVWEPRDIKQPSVRMNLIQ 235 >gi|13476445|ref|NP_108015.1| DNA repair protein RecO [Mesorhizobium loti MAFF303099] gi|20139624|sp|Q985A3|RECO_RHILO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|14027206|dbj|BAB54160.1| DNA repair protein; RecO [Mesorhizobium loti MAFF303099] Length = 253 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 150/239 (62%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEVMTR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVMTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L++ + Sbjct: 61 RLDEHLGTFQAEAIEMNAARLMDSAVAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R G P+ Sbjct: 121 LDDADAAGELVARFELLILDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGAPWR 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +KML LP+FL D +++ AF+LT +F ++ + I R FL L + Sbjct: 181 DKMLALPAFLQRGSGLRADPAAVEDAFRLTGFFFTRHVYEPRAIEQPDARAGFLAALRK 239 >gi|74420976|gb|ABA05175.1| DNA replication and repair protein RecO [Nitrobacter winogradskyi Nb-255] Length = 278 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 17 MEWTDDGIVLGVRRHGESSAIVELLTRTHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 76 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 77 RLDEHLGTYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEVIFAMLERTLDD 136 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R G P+ Sbjct: 137 FDRAGGAAIHLIRFELAMLSELGFGLDLSACAATGATGDLIYVSPKSGGAVSRQAGEPWR 196 Query: 181 EKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +++L LP FL E+ L F+LT FL ++ L+ R F+ ++ Sbjct: 197 DRLLPLPPFLRVTHDEQDGWSEQDLLDGFELTGRFLLRHVLEPRGQGHSDARAGFINAVV 256 Query: 238 E 238 Sbjct: 257 R 257 >gi|121601946|ref|YP_988791.1| DNA repair protein RecO [Bartonella bacilliformis KC583] gi|166221884|sp|A1US38|RECO_BARBK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120614123|gb|ABM44724.1| DNA repair protein RecO [Bartonella bacilliformis KC583] Length = 245 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 102/235 (43%), Positives = 151/235 (64%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R YGE ++ILEV+TRQ+GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGARQYGETSVILEVVTRQHGRYMGVVKGGRSRRMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E L+ ++L+ LYGLQ + FR LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFKLEALDLCASRLMFLPEALYGLQLMASHFRLLPERDPHPILYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ V+ E+ LL+ +GFGLDL+ C VTG + L +VSPKSG AVC VGLP+ Sbjct: 121 FDEQFVNAELLVRFEMRLLEELGFGLDLSHCAVTGRQEKLYYVSPKSGRAVCEEVGLPWK 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 K+L+LP FL + + +D D +++ F LTD+FL ++ + I +R + Sbjct: 181 NKLLLLPKFLIERTNRPVDFDDIRNGFTLTDFFLTRHVWEPRGIKQPSVRAILIQ 235 >gi|115525024|ref|YP_781935.1| DNA repair protein RecO [Rhodopseudomonas palustris BisA53] gi|122295836|sp|Q07M79|RECO_RHOP5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115518971|gb|ABJ06955.1| DNA repair protein RecO [Rhodopseudomonas palustris BisA53] Length = 258 Score = 330 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 99/240 (41%), Positives = 142/240 (59%), Gaps = 2/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G +++P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSKLRPVLQPGNSVHAGWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E + A LL+ YG+ + L R LPER+P E+Y+ + L Sbjct: 61 RLDEHLGYYALEGMRLRAATLLAVPHAAYGITHLAALARLLPERDPHPEMYETVERILED 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ G V+ EL +L +GFGLDL+ C TGVT DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDATMAGAHLVRFELAMLGELGFGLDLSACAATGVTSDLIYVSPKSGGAVSRTAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTI--DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP FL ++E AD L+ F LT FL + L+ R+ F+ + Sbjct: 181 DKLLRLPPFLREDEDAAGCTADDLRDGFALTGRFLLRNVLEPRGQGHSDARDGFINAVTR 240 >gi|319408285|emb|CBI81938.1| DNA repair protein RecO [Bartonella schoenbuchensis R1] Length = 248 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 149/235 (63%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S M +LQ GN V W + Sbjct: 1 MRWKEQAIILGTRQHGETSVILEIMTRQHGRYMGMVKGGRSRSMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E L+ H ++L+ LY LQ + R LPER+P LYDML+IF+ Sbjct: 61 RLDEHLGLFKLEALDLHASRLMLIPEALYTLQLMASHLRLLPERDPHPILYDMLHIFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 VI ++ ++ E+ LLK +GFGLDL+ CVVTG ++L +VSPKSG AV G + Sbjct: 121 FDEWFVIAELLIRFEMRLLKELGFGLDLSCCVVTGCRENLHYVSPKSGRAVSEEAGYLWR 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L LP FL + + ID + +++ F LT++FL ++ + I +R N + Sbjct: 181 DKLLPLPQFLIQRASRPIDFNDMRNGFALTNFFLTRHVWEPRRIQQPSVRVNLIN 235 >gi|85716281|ref|ZP_01047255.1| DNA repair protein RecO [Nitrobacter sp. Nb-311A] gi|85696953|gb|EAQ34837.1| DNA repair protein RecO [Nitrobacter sp. Nb-311A] Length = 260 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 98/241 (40%), Positives = 137/241 (56%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWIDDGIVLGVRRHGESSAIVELLTRDHGRHLGLVRGGAGSRMRPLLQPGNSVNALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 61 RLDEHLGAYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEGIFTMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TGVT DL++VSPKSGGAV R G P+ Sbjct: 121 FDHAGGAAIHLIRFELAMLSELGFGLDLSACAATGVTGDLIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +++L LP FL E+ L F+LT FL ++ L+ R F+ ++ Sbjct: 181 DRLLPLPPFLRASHDEQNGCSEQDLLDGFELTGRFLLRHVLEPRGQGHSDARAGFINAVV 240 Query: 238 E 238 Sbjct: 241 R 241 >gi|49475306|ref|YP_033347.1| DNA repair protein RecO [Bartonella henselae str. Houston-1] gi|61215010|sp|Q6G457|RECO_BARHE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49238112|emb|CAF27319.1| DNA repair protein reco [Bartonella henselae str. Houston-1] Length = 256 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R YGE ++ILEVMTRQ+GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQYGETSVILEVMTRQHGRYMGVVKGGRSRRMAVLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ IV LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFRLEALDLHAARLILFPEALYALQLIVFHLHLLPERDPHPILYDILHLFMQS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ E+ L+ +GFGLDL++C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDEPFINAELLVRFEMRFLEELGFGLDLSRCAATGRLEKLCYVSPKSGRAVCEEAGHPWR 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 EK+L LP FL + + +D +K+ F LT +FL ++ + I +R + + Sbjct: 181 EKLLNLPQFLVQRTVRPVDFSDIKNGFILTGFFLMRHVWEPRNIKQPSVRISLIQ 235 >gi|162139842|ref|YP_318527.2| DNA repair protein RecO [Nitrobacter winogradskyi Nb-255] gi|119361470|sp|Q3SRB6|RECO_NITWN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 262 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRTHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 61 RLDEHLGTYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEVIFAMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDRAGGAAIHLIRFELAMLSELGFGLDLSACAATGATGDLIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +++L LP FL E+ L F+LT FL ++ L+ R F+ ++ Sbjct: 181 DRLLPLPPFLRVTHDEQDGWSEQDLLDGFELTGRFLLRHVLEPRGQGHSDARAGFINAVV 240 Query: 238 E 238 Sbjct: 241 R 241 >gi|315122361|ref|YP_004062850.1| DNA repair protein RecO [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495763|gb|ADR52362.1| DNA repair protein RecO [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 240 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 182/240 (75%), Positives = 217/240 (90%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+WQDDAI+LGVRSYGEKNIILEVMTR YGRHLGFVR GQS R+QP+LQ GNLVRVNWRS Sbjct: 1 MHWQDDAIVLGVRSYGEKNIILEVMTRHYGRHLGFVRYGQSRRIQPVLQVGNLVRVNWRS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL Q+LGEFR E++E C+KLLSS++ LYGLQS++P+FRFLPER+PC +LYD+LN+F+N Sbjct: 61 RLEQDLGEFRLEIIEYRCSKLLSSAISLYGLQSMIPIFRFLPERDPCPDLYDLLNLFINS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 HKI S++GKIF+QIEL+LLKNIGFGL++TKCVVTGV+ DL WVSPKSGGA+C S+GLPYA Sbjct: 121 HKISSILGKIFIQIELILLKNIGFGLEITKCVVTGVSHDLSWVSPKSGGAICHSLGLPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 KMLVLP FLWKE+Q IDADSL++AF+LT YFL+KYA QHNIIHC+ LR NFL KL+EL+ Sbjct: 181 SKMLVLPLFLWKEQQNIDADSLRNAFRLTGYFLDKYAFQHNIIHCNSLRINFLNKLIELL 240 >gi|163867994|ref|YP_001609198.1| DNA repair protein RecO [Bartonella tribocorum CIP 105476] gi|189039650|sp|A9IRN6|RECO_BART1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|161017645|emb|CAK01203.1| DNA repair protein RecO [Bartonella tribocorum CIP 105476] Length = 248 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILGVR YGE ++ILE++TR+ GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGVRQYGETSVILEIITRERGRYMGVVKGGRSRRMAALLQPGNFVEAEWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ I R LPER+P LYD+L++F+ Sbjct: 61 RLEEHLGLFRLEALDFHAARLICLPEALYALQLIAFHLRLLPERDPHPVLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V ++ V+ E+ LL+ +GFGLDL+ C TG Q L +VSPKSG AVC G P+ Sbjct: 121 FDEPFVNAELLVRFEMRLLEELGFGLDLSCCAATGRKQKLYYVSPKSGRAVCEEAGEPWK 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L+LP FL + + D + + F LT +FL +Y + I +R N + Sbjct: 181 KKLLILPQFLVQRATRPADFRDIINGFNLTSFFLMRYVWEPRDIKQPSVRTNLIQ 235 >gi|90424142|ref|YP_532512.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB18] gi|119361479|sp|Q214J3|RECO_RHOPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|90106156|gb|ABD88193.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB18] Length = 254 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 97/242 (40%), Positives = 139/242 (57%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G +++P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRGHGRHLGLVRGGAGSKLRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS +YG+ + L R LPER+P E+Y+ L L+ Sbjct: 61 RLDEHLGYYVLEGTRMRAAMLLASSHAVYGVTHLASLARLLPERDPQPEIYERLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL C TGVT DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDVGEAAVHVIRFELTMLAELGFGLDLANCAATGVTSDLIYVSPKSGGAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWKEE---QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L LP FL + L+ F LT FL + L+ R+ F+ ++ Sbjct: 181 DKLLRLPPFLREGSAQRNDWSDQDLQDGFLLTGRFLLRNVLEPRGQGHSDARDGFINAVV 240 Query: 238 EL 239 L Sbjct: 241 RL 242 >gi|110633306|ref|YP_673514.1| DNA repair protein RecO [Mesorhizobium sp. BNC1] gi|119361464|sp|Q11JS6|RECO_MESSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110284290|gb|ABG62349.1| DNA replication and repair protein RecO [Chelativorans sp. BNC1] Length = 248 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 100/239 (41%), Positives = 146/239 (61%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LG R +GE ++ILE +T +GRHLG VR G+S RMQP+LQ GN V + WR+ Sbjct: 1 MEWHDEGIVLGTRRHGESSVILEAITAAHGRHLGLVRGGRSKRMQPVLQPGNRVDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E LE + A+LL+S++ +YG+Q + R LPER+P L++ L + Sbjct: 61 RLDEHLGLFQVEPLELNAARLLNSAVAIYGIQLLAAHLRLLPERDPHPGLFEALGVIAAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G + + EL +L +GFGLDL +C VTG +DL +VSPK+G AV R G P+A Sbjct: 121 LDEPETAGVLVARFELAVLDALGFGLDLARCAVTGSREDLAYVSPKTGRAVTREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQT-IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP+FL + D L AF LT +F ++ + + R FL ++ Sbjct: 181 DKLLPLPTFLTAGNEALYDRAILSQAFALTGFFFARHVYEPRGLTEPEARAGFLAAVMR 239 >gi|86749733|ref|YP_486229.1| DNA repair protein RecO [Rhodopseudomonas palustris HaA2] gi|119361478|sp|Q2IWU2|RECO_RHOP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86572761|gb|ABD07318.1| DNA replication and repair protein RecO [Rhodopseudomonas palustris HaA2] Length = 249 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 98/243 (40%), Positives = 140/243 (57%), Gaps = 3/243 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S R++P+LQ GN V WR+ Sbjct: 1 MEWSDEGIILGVRRHGEAGAIVELLTRGHGRHLGLVRGGASSRLRPLLQPGNSVLAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E A +L+SS +YG+ + L R LPER+P ++Y+ML L+ Sbjct: 61 RLDEHLGYYQLEGTRMRAATMLASSHAVYGITHLASLARLLPERDPHEDIYEMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATTDLIYVSPKSGGAVSRTAGEPWR 180 Query: 181 EKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 EK+L LP FL L+ F LT FL + L+ R+ F+ + Sbjct: 181 EKLLRLPDFLREDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVA 240 Query: 238 ELI 240 + + Sbjct: 241 KHL 243 >gi|192291353|ref|YP_001991958.1| DNA repair protein RecO [Rhodopseudomonas palustris TIE-1] gi|238692599|sp|B3QJH7|RECO_RHOPT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|192285102|gb|ACF01483.1| DNA repair protein RecO [Rhodopseudomonas palustris TIE-1] Length = 250 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 98/244 (40%), Positives = 139/244 (56%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V +WR+ Sbjct: 1 MEWSDEGIILGVRRHGESAAIVELLTRGHGRHLGMVRGGASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLGSSHAVYGVTHLASLARLLPERDPHEEIYQRLVLTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV RS G P+ Sbjct: 121 FDDFGVAAAHLIRFELAILAELGFGLDLSACAATGSTTELIYVSPKSGSAVSRSAGEPWR 180 Query: 181 EKMLVLPSFLWK----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LP+FL L F+LT FL + L+ R F+ + Sbjct: 181 DRLLRLPAFLRDDEAESGNGWSGQDLFDGFELTGRFLLRNVLEPRGQSHSDARAGFINAI 240 Query: 237 LELI 240 + Sbjct: 241 TRAL 244 >gi|299135099|ref|ZP_07028290.1| DNA repair protein RecO [Afipia sp. 1NLS2] gi|298590076|gb|EFI50280.1| DNA repair protein RecO [Afipia sp. 1NLS2] Length = 249 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 93/241 (38%), Positives = 135/241 (56%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILG R +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIILGTRRHGESSAIVELLTRSHGRHLGLVRGGAGTRMRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E + A +L+ YG+ + L R LPER P +Y++L L+ Sbjct: 61 RLDEHLGYYAIEGTQLRAATMLACPHAAYGITHLAALARLLPERAPHDGIYELLEAILDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V V+ E+ +L +GFGLDL+ C TG DL++VSPKSG AV R+ G P+ Sbjct: 121 FDEPVVAATHVVRFEMAMLDELGFGLDLSSCAATGAQADLIYVSPKSGCAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDAD---SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 E++L LP FL + A+ + F+LT FL + L+ R+ F+ + Sbjct: 181 ERLLPLPPFLRAGHEDSGAETERDMMEGFRLTGLFLLRNVLEPRGQGHSDARDGFIAAVA 240 Query: 238 E 238 Sbjct: 241 R 241 >gi|91977125|ref|YP_569784.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB5] gi|119361480|sp|Q136V6|RECO_RHOPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91683581|gb|ABE39883.1| DNA replication and repair protein RecO [Rhodopseudomonas palustris BisB5] Length = 249 Score = 324 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 96/243 (39%), Positives = 140/243 (57%), Gaps = 3/243 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V WR+ Sbjct: 1 MEWSDEGIILGVRRHGEAGAIVELLTRSHGRHLGLVRGGASSRMRPLLQPGNSVLAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E A +L+SS +YG+ + L R LPER+P ++Y+ML L+ Sbjct: 61 RLDEHLGYYQLEGTRMRAATMLASSHAVYGVTHLASLARLLPERDPHEDIYEMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV R+ G P+ Sbjct: 121 FDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATVELIYVSPKSGSAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWKEE---QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L LP+FL + L+ F LT FL + L+ R+ F+ + Sbjct: 181 DKLLRLPAFLRDDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVT 240 Query: 238 ELI 240 + Sbjct: 241 RHL 243 >gi|319784500|ref|YP_004143976.1| DNA repair protein RecO [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170388|gb|ADV13926.1| DNA repair protein RecO [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 258 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 104/239 (43%), Positives = 151/239 (63%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEV+TR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVLTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L + + Sbjct: 61 RLDEHLGTFQAEAIEMNAARLMDSAVAVYGLQTMAAHLRLLPERDAHEGLYETLAVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R GLP+ Sbjct: 121 LDDADVAGELVARFELLVLDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGLPWR 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 ++ML LP+FL DA + AF+LT +F N++ + I R FL L + Sbjct: 181 DRMLALPAFLQRGSGLRADAADVDDAFRLTGFFFNRHVYEPRGIEPPDARTGFLAALRK 239 >gi|222148084|ref|YP_002549041.1| DNA repair protein RecO [Agrobacterium vitis S4] gi|221735072|gb|ACM36035.1| DNA repair protein RecO [Agrobacterium vitis S4] Length = 264 Score = 324 bits (830), Expect = 8e-87, Method: Composition-based stats. Identities = 110/245 (44%), Positives = 160/245 (65%), Gaps = 5/245 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AI+LG R +GE ++I E+MT GRHLG VR G+S MQP+LQ GN+V V WR+ Sbjct: 1 MEWTDQAIVLGARRHGETSVIAEMMTLARGRHLGLVRGGRSRTMQPVLQPGNVVEVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+FR E L+ L+SS+ +YG+Q++ L R LPEREP LY+ +NI L+ Sbjct: 61 RLEEHLGDFRVEPLQLRAGHLMSSATAVYGVQALASLLRLLPEREPHGHLYEAMNIILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++F++ EL +L ++GFGLDLT C TG QDL++VSPK+G AV + GLPYA Sbjct: 121 LHEPASAGELFIRFELAILNDLGFGLDLTACAATGGRQDLVFVSPKTGRAVSHAAGLPYA 180 Query: 181 EKMLVLPSF-----LWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +++L LP F L +++ DA +L+ AF+LT YFL ++ + + R+ F Sbjct: 181 DRLLTLPVFLQPEPLVGKDKQADAQALQQAFRLTGYFLQRHVYEPRGLTAGAARDGFCQA 240 Query: 236 LLELI 240 L+ + Sbjct: 241 ALKAL 245 >gi|218529181|ref|YP_002419997.1| DNA repair protein RecO [Methylobacterium chloromethanicum CM4] gi|254764643|sp|B7KPI6|RECO_METC4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218521484|gb|ACK82069.1| DNA repair protein RecO [Methylobacterium chloromethanicum CM4] Length = 246 Score = 324 bits (830), Expect = 9e-87, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 138/240 (57%), Gaps = 6/240 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQT------IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +++L LP FL +Q D ++ F LT YFL+++ + R F+ Sbjct: 181 DRLLPLPPFLRDRDQPGSGWRTPDTQDVREGFTLTGYFLDQHVWRPRAQDTPEERARFVA 240 >gi|90420864|ref|ZP_01228769.1| DNA repair protein recO [Aurantimonas manganoxydans SI85-9A1] gi|90334839|gb|EAS48611.1| DNA repair protein recO [Aurantimonas manganoxydans SI85-9A1] Length = 243 Score = 324 bits (830), Expect = 9e-87, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 150/239 (62%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++AI+LGVR GE +++ EVMTR GRHLG VR G+S + QP+LQ GN V V+WR+ Sbjct: 1 MEWREEAIVLGVRRLGETSVVAEVMTRARGRHLGLVRGGRSRKQQPVLQPGNSVAVHWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ S + L G+Q + R L ER+P LYD L I ++ Sbjct: 61 RLDEHMGAFVLEPLELRAARLMESGVGLNGVQLVAAHLRLLAERDPHARLYDGLQIIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P ++ ++ ++ E+ LL+ +GFGLDL +C TG DL +VSP++G AV R G P+ Sbjct: 121 LDRPELVAELMLRFEIALLEELGFGLDLERCAATGQRDDLAYVSPRTGRAVSRDAGAPWH 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP+FL DA+SL + ++LT YFL ++ + I R FL L ++ Sbjct: 181 DKLLTLPAFLADAATASDAESLAAGYRLTGYFLGRHVYEPRGIDVPDARAGFLSALRKI 239 >gi|39935766|ref|NP_948042.1| DNA repair protein RecO [Rhodopseudomonas palustris CGA009] gi|61215044|sp|Q6N6B8|RECO_RHOPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|39649619|emb|CAE28141.1| putative DNA repair protein RecO [Rhodopseudomonas palustris CGA009] Length = 250 Score = 324 bits (830), Expect = 9e-87, Method: Composition-based stats. Identities = 98/244 (40%), Positives = 139/244 (56%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V +WR+ Sbjct: 1 MEWSDEGIILGVRRHGESAAIVELLTRGHGRHLGMVRGGASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLGSSHAVYGVTHLASLARLLPERDPHEEIYQRLVLTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV RS G P+ Sbjct: 121 FDDFGVAAAHLIRFELAILAELGFGLDLSACAATGSTTELIYVSPKSGSAVSRSAGEPWR 180 Query: 181 EKMLVLPSFLWK----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LP+FL L F+LT FL + L+ R F+ + Sbjct: 181 DRLLRLPAFLRDDEAESGHGWSGQDLFDGFELTGRFLLRNVLEPRGQSHSDARAGFINAI 240 Query: 237 LELI 240 + Sbjct: 241 TRAL 244 >gi|209884979|ref|YP_002288836.1| DNA repair protein RecO [Oligotropha carboxidovorans OM5] gi|229470366|sp|B6JGG5|RECO_OLICO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209873175|gb|ACI92971.1| DNA repair protein RecO [Oligotropha carboxidovorans OM5] Length = 249 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 132/241 (54%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD IILG R +GE N I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIILGTRRHGEANAIVELLTRSHGRHLGLVRGGAGTRMRPLLQPGNSVGAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A +LS S YG+ + L R LPER P +Y+ L Sbjct: 61 RLDEHLGYYALEGTRLRAATMLSYSHAAYGITHLAALARLLPERAPHDGIYEQFEAILED 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + V+ E+ +L+ +GFGLDL+ C TG DL++VSPKSG AV RS G P+ Sbjct: 121 FDDPVIAATHVVRFEMAMLEELGFGLDLSCCAATGTHTDLIYVSPKSGCAVSRSAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDAD---SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 E++L LP+FL + D + F+LT FL + L+ R F+ + Sbjct: 181 ERLLPLPAFLRAGNEESSPDGEADIMEGFRLTGMFLLRNVLEPRGQAHSDARAGFIAAVA 240 Query: 238 E 238 Sbjct: 241 R 241 >gi|254512349|ref|ZP_05124416.1| DNA repair protein RecO [Rhodobacteraceae bacterium KLH11] gi|221536060|gb|EEE39048.1| DNA repair protein RecO [Rhodobacteraceae bacterium KLH11] Length = 241 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 94/243 (38%), Positives = 132/243 (54%), Gaps = 5/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MDWRDHGILLTARRHGETAAIIEVFTEGHGRHAGVVRGGTSRKIAPILQPGAQLDVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F+ E L S A S L L GL ++V L F LPEREP +Y ++ Sbjct: 61 RLEEHIGTFQVEPLRSRAAAAFSGRLALAGLNAVVALLSFCLPEREPHPAIYKQTEQLMD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ EL LL+ +GFGLDL+ C VTGVT L++VSPK+G AV R+ + Sbjct: 121 LLGQDEVWPLAYLRWELALLEELGFGLDLSACAVTGVTDGLVYVSPKTGRAVSRAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN--IIHCHLLRENFLGKLL 237 A+K+L LP L E DA + A + T YFL + L + R F+ + Sbjct: 181 ADKLLPLPPCLRGEGAAPDAG-IAEALRTTGYFLENH-LAPSLGHTPLPDARARFVAQFT 238 Query: 238 ELI 240 + Sbjct: 239 RRL 241 >gi|92117771|ref|YP_577500.1| DNA repair protein RecO [Nitrobacter hamburgensis X14] gi|119361468|sp|Q1QL57|RECO_NITHX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91800665|gb|ABE63040.1| DNA replication and repair protein RecO [Nitrobacter hamburgensis X14] Length = 253 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 95/241 (39%), Positives = 138/241 (57%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRGHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL +S YG+ + L R LPER+P +++ L L+ Sbjct: 61 RLDEHLGAYALEGTRMRAANLLGASHATYGVTHLASLARLLPERDPHDGIFERLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ CV TG T +L++VSPKSGGAV R G P+ Sbjct: 121 FDTAGEAAIHLIRFELAMLTELGFGLDLSTCVATGTTTELIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +++L LP FL +E+ L F+LT FL ++ L+ R F+ ++ Sbjct: 181 DRLLRLPPFLREADEEQSGWSDQDLLDGFELTGRFLLRHVLEPRGQGHSDARAGFINAVV 240 Query: 238 E 238 + Sbjct: 241 K 241 >gi|163850484|ref|YP_001638527.1| DNA repair protein RecO [Methylobacterium extorquens PA1] gi|240137548|ref|YP_002962019.1| DNA repair protein RecO [Methylobacterium extorquens AM1] gi|238687373|sp|A9W1K0|RECO_METEP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|163662089|gb|ABY29456.1| DNA repair protein RecO [Methylobacterium extorquens PA1] gi|240007516|gb|ACS38742.1| DNA repair protein RecO [Methylobacterium extorquens AM1] Length = 246 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 138/240 (57%), Gaps = 6/240 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQT------IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +++L LP FL +Q D ++ F LT YFL+++ + R F+ Sbjct: 181 DRLLPLPPFLRDRDQPGSGWRTPDTHDVREGFTLTGYFLDQHVWRPRAQDTPEERARFVA 240 >gi|254560020|ref|YP_003067115.1| DNA repair protein RecO [Methylobacterium extorquens DM4] gi|254267298|emb|CAX23130.1| DNA repair protein RecO [Methylobacterium extorquens DM4] Length = 246 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 139/240 (57%), Gaps = 6/240 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQ------TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +++L LP FL +Q T D ++ F LT YFL+++ + R F+ Sbjct: 181 DRLLPLPPFLRDRDQSGSGWRTPDTHDVREGFTLTGYFLDQHVWRPRAQDTPEERARFVA 240 >gi|170748446|ref|YP_001754706.1| DNA repair protein RecO [Methylobacterium radiotolerans JCM 2831] gi|170654968|gb|ACB24023.1| DNA repair protein RecO [Methylobacterium radiotolerans JCM 2831] Length = 239 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 103/234 (44%), Positives = 141/234 (60%), Gaps = 1/234 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DDA++LG+R +GE +ILE MT +GRHLG V G+S RMQP+LQAGN VR+ WR+ Sbjct: 1 MQWTDDALVLGLRRHGETGVILEAMTEAHGRHLGLVHGGRSRRMQPVLQAGNRVRLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E L+S ++L+ SSL LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDEGLGSYAVEPLDSQVSRLIGSSLALYGMNHMAALLRLLPERDPHPALYEAAGILVEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+V + V+ EL +L +GFGLDLT C TG L +VSPKSG AV S G PY Sbjct: 121 LDDPAVAPPLMVRFELAILSELGFGLDLTACAATGGNDALAYVSPKSGRAVSASAGEPYR 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +++L LP+FL + D + F LT YFL+++ + R F+ Sbjct: 181 DRLLALPTFL-HAGGSPGPDGVAQGFTLTGYFLDRHVWGPRGLGPPEERARFVA 233 >gi|254469353|ref|ZP_05082758.1| DNA repair protein RecO [Pseudovibrio sp. JE062] gi|211961188|gb|EEA96383.1| DNA repair protein RecO [Pseudovibrio sp. JE062] Length = 253 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 102/244 (41%), Positives = 147/244 (60%), Gaps = 6/244 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQ + I++G R GE NI+LEV+T GR LG VR G+S R QP LQ GN + + WR+ Sbjct: 1 MQWQAEGIVIGTRKQGENNILLEVLTPDRGRCLGLVRGGRSRRQQPALQLGNHLNLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F E L+ A L+ ++ ++GLQS+ R LPER+P L+ L++ L+ Sbjct: 61 RLDEHLGFFTVEPLQLRAAHLMQTARAIHGLQSLCAQIRLLPERDPHPNLFHALDVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + + ++ EL LL +GFGLDLT+C TG T +L+WVSPKSG AVC++ G PYA Sbjct: 121 LEDPQIGAALVLRFELELLNELGFGLDLTECAATGATDELIWVSPKSGRAVCKTAGQPYA 180 Query: 181 EKMLVLPSFL------WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 K+L LP FL + I +++ F LT YFL KY + I R++++ Sbjct: 181 SKLLTLPEFLKAPQARLSQNIQISKGDMEAGFSLTGYFLFKYIYEPRSIPWPPARDSYVT 240 Query: 235 KLLE 238 L + Sbjct: 241 ALKK 244 >gi|316934141|ref|YP_004109123.1| DNA repair protein RecO [Rhodopseudomonas palustris DX-1] gi|315601855|gb|ADU44390.1| DNA repair protein RecO [Rhodopseudomonas palustris DX-1] Length = 250 Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 96/244 (39%), Positives = 140/244 (57%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR S RM+P+LQ GN V +WR+ Sbjct: 1 MDWSDEGIILGVRRHGEAGAIVELLTRSHGRHLGMVRGAASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL+SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLASSHAVYGVTHLASLARLLPERDPHEEIYHRLILTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV R G P+ Sbjct: 121 FDDLGIAAAHLIRFELAILAELGFGLDLSACAATGATTELIYVSPKSGSAVSRIAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDA----DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LP FL +E ++ L F LT FL + L+ R F+ + Sbjct: 181 DRLLRLPPFLRDDEAASESGWSGQDLFDGFALTGRFLLRNVLEPRGQGHSDARAGFINAV 240 Query: 237 LELI 240 + Sbjct: 241 TRAL 244 >gi|27380169|ref|NP_771698.1| DNA repair protein RecO [Bradyrhizobium japonicum USDA 110] gi|30179751|sp|Q9RH67|RECO_BRAJA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|27353323|dbj|BAC50323.1| recO-like protein [Bradyrhizobium japonicum USDA 110] Length = 250 Score = 320 bits (822), Expect = 7e-86, Method: Composition-based stats. Identities = 97/240 (40%), Positives = 138/240 (57%), Gaps = 2/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSRMRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E L+ A LL+SS +YG+ + + R LPER+P E++ +L L+ Sbjct: 61 RLDEHLGTYAVEGLKLRAATLLASSHGVYGVTHLASIARLLPERDPHEEIFGLLEHSLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + EL +L +GFGL L C VTG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDDIGSAAVHVIHFELAMLAELGFGLALDNCAVTGETTDLIYVSPKSGGAVSRGAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTID--ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP FL E + L+ F+LT FL ++ L+ R F+ L Sbjct: 181 DRLLRLPPFLRHGETATELTDQDLQDGFRLTGLFLLRHVLEPRGQVHSDARAGFINALTR 240 >gi|6655025|gb|AAF22872.1| recO-like protein [Bradyrhizobium japonicum] Length = 250 Score = 320 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 97/240 (40%), Positives = 138/240 (57%), Gaps = 2/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSRMRPLLQPGNSVTAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E L+ A LL+SS +YG+ + + R LPER+P E++ +L L+ Sbjct: 61 RLDEHLGTYAVEGLKLRAATLLASSHGVYGVTHLASIARLLPERDPHEEIFGLLEHSLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + EL +L +GFGL L C VTG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDDIGSAAVHVIHFELAMLAELGFGLALDNCAVTGETTDLIYVSPKSGGAVSRGAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTID--ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP FL E + L+ F+LT FL ++ L+ R F+ L Sbjct: 181 DRLLRLPPFLRHGETATELTDQDLQDGFRLTGLFLLRHVLEPRGQVHSDARAGFINALTR 240 >gi|49474068|ref|YP_032110.1| DNA repair protein RecO [Bartonella quintana str. Toulouse] gi|61215004|sp|Q6G080|RECO_BARQU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49239572|emb|CAF25929.1| DNA repair protein recO [Bartonella quintana str. Toulouse] Length = 243 Score = 320 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILG R YGE +IILEVMTRQ+GR++G V+ G S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGTRQYGETSIILEVMTRQHGRYMGIVKGGHSRRMAGLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ + A+L+ LY LQ IV R LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFRLEALDLYAARLILLPEALYALQLIVFHLRLLPERDPYPSLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ V+ E+ LL+ +GFGLDL++C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDESFVNAELLVRFEMRLLEELGFGLDLSRCAATGRQERLFYVSPKSGRAVCEEAGRPWK 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 EK+L LP FL + + ++ + + F LT +FL ++ + I +R N + Sbjct: 181 EKLLTLPQFLVRRAIRPVNFSDIINGFILTGFFLMRHVWEPRGIKQPSVRVNLIQ 235 >gi|260432760|ref|ZP_05786731.1| DNA repair protein RecO [Silicibacter lacuscaerulensis ITI-1157] gi|260416588|gb|EEX09847.1| DNA repair protein RecO [Silicibacter lacuscaerulensis ITI-1157] Length = 241 Score = 317 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 89/242 (36%), Positives = 130/242 (53%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MDWRDHGILLTARRHGETAAIIEVFTETHGRHAGVVRGGASRKIAPILQPGAQLDVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F+ E L S A S L L GL ++V L F LPEREP +Y ++ Sbjct: 61 RLQEHIGTFQVEPLRSRAAAAFSGRLALSGLNAVVALLSFFLPEREPHPGIYRQTEQLMD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+ +GFGLDLT+C VTG T+ L +VSPK+G AV + Sbjct: 121 LLGQDEIWPLAYLRWELALLEELGFGLDLTRCAVTGTTEGLAYVSPKTGRAVSAEGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL-NKYALQHNIIHCHLLRENFLGKLLE 238 A+++L LP L + D D + + + T YFL ++ A R F+ + Sbjct: 181 ADRLLPLPPVLRGQGGAPD-DEIAAGLRTTGYFLAHRVAPSLGHTPLPEARARFVDQFTR 239 Query: 239 LI 240 + Sbjct: 240 RL 241 >gi|114705890|ref|ZP_01438793.1| DNA repair protein RecO [Fulvimarina pelagi HTCC2506] gi|114538736|gb|EAU41857.1| DNA repair protein RecO [Fulvimarina pelagi HTCC2506] Length = 241 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 93/236 (39%), Positives = 148/236 (62%), Gaps = 1/236 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ ++LGVR +GE ++I E+MTR GRHLG VR G+S M+P+LQ GN V +WR+ Sbjct: 1 MEWREEGVVLGVRRHGETSVIAELMTRSRGRHLGLVRGGRSKAMRPVLQPGNSVMAHWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E + S L+ S++ L+G+Q R L ER+P LYD L + + Sbjct: 61 RLDEHMGAFALEPVASRAGGLMESTVGLHGVQLAASHLRLLAERDPHPRLYDGLIVLIEN 120 Query: 121 HKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + G++ ++ EL +L+ +GFGLDL +C +G +DL++VSPKSG AV R G PY Sbjct: 121 LNADRLTAGELMLRFELAVLEELGFGLDLARCAASGTKEDLVYVSPKSGRAVSREPGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +K+L LP+FL ++ D ++L++ F LT YFL+++ + + R +F+ Sbjct: 181 HDKLLALPAFLTDTDRAADGETLRTGFTLTRYFLSRHVYEPRGLDEPHSRTSFISA 236 >gi|188580258|ref|YP_001923703.1| DNA repair protein RecO [Methylobacterium populi BJ001] gi|238692877|sp|B1ZA19|RECO_METPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|179343756|gb|ACB79168.1| DNA repair protein RecO [Methylobacterium populi BJ001] Length = 246 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 94/240 (39%), Positives = 139/240 (57%), Gaps = 6/240 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDEGLVIGLRKHGETGVVLELMTLEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ + + Sbjct: 61 RLDGALGSYAVEPLTLNASRLMDSGLALYGIGHLSTLLRLLPERDPHPALYEAAQVLIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDEPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQT------IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +++L LP FL +Q DA ++ F LT YFL+++ + R F+ Sbjct: 181 DRLLALPPFLRDRDQPGSGWRTPDAHDVREGFTLTGYFLDQHVWRPRAQDTPEERARFVA 240 >gi|254485777|ref|ZP_05098982.1| DNA repair protein RecO [Roseobacter sp. GAI101] gi|214042646|gb|EEB83284.1| DNA repair protein RecO [Roseobacter sp. GAI101] Length = 241 Score = 314 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 93/242 (38%), Positives = 128/242 (52%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPTQGRHAGIVRGGTSRKIAPILQPGAQLDVAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S +S L L GL ++ L F LPEREP LY L+ Sbjct: 61 RLEGHIGAFTVEPVRSRAVSAMSDRLSLAGLNTVTALLSFCLPEREPHPPLYHRTQALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q EL LL+ +G+GLDLT C VTG T L++VSPKSG AV R + Sbjct: 121 LLDQGDLWPLAYLQWELSLLEEMGYGLDLTACAVTGATDALVFVSPKSGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLGKLLE 238 A+KML LP L E + D + L F+ T YFL ++ ++ R ++ Sbjct: 181 ADKMLPLPPVLLGEGEARDDEIL-QGFKTTGYFLEQHLARNLGGRPLPEARARYVDAFSR 239 Query: 239 LI 240 I Sbjct: 240 QI 241 >gi|148256029|ref|YP_001240614.1| DNA repair protein RecO [Bradyrhizobium sp. BTAi1] gi|166221886|sp|A5EKL4|RECO_BRASB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146408202|gb|ABQ36708.1| DNA replication and repair protein RecO [Bradyrhizobium sp. BTAi1] Length = 248 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 99/241 (41%), Positives = 139/241 (57%), Gaps = 2/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG+R +GE + +LE++TR++GRHLG VR RM+P+LQ GN VR WR+ Sbjct: 1 MEWTDDGIVLGLRRHGESSAVLELLTREHGRHLGLVRGASGARMRPMLQPGNTVRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + + L A+L+S + YG+ + L R LPER+P E+Y L L+ Sbjct: 61 RLDEHLGMYAIDGLTLRAAELMSVAHGAYGVTHLAALARLLPERDPHQEMYLRLEHALDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ EL +L +GFGLDL C TG T DL++VSPKSGGAV RS G P+A Sbjct: 121 FAEAGGAAVHIVRFELAILAELGFGLDLESCAATGETTDLVYVSPKSGGAVSRSAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQ--TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP FL + E L F+LT FL ++ L+ RE F+ + Sbjct: 181 DRLLPLPPFLRESEDDHGFSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR 240 Query: 239 L 239 Sbjct: 241 A 241 >gi|328543511|ref|YP_004303620.1| DNA repair protein recO [polymorphum gilvum SL003B-26A1] gi|326413255|gb|ADZ70318.1| DNA repair protein recO [Polymorphum gilvum SL003B-26A1] Length = 253 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 145/240 (60%), Gaps = 4/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W +D IILG RS+GE ++LE+MTR+ GRHLG VR G+S R QP+LQ GNLVR WR+ Sbjct: 1 MEWSEDGIILGTRSHGESGVVLELMTRRRGRHLGLVRGGRSRRQQPVLQPGNLVRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R+A LG F E L+ L+ S+L L+ LQ + L R LPER+ LYD L I L+ Sbjct: 61 RIADQLGAFTVEPLQLRAGALMDSALALHALQHLAGLLRLLPERDAHERLYDALTIVLDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + G + V+ EL LL +GFGLDLT+C TG DL +VSPKSG AV R G PY Sbjct: 121 LGEAMIAGPLIVRFELELLNELGFGLDLTRCAATGQLWDLAYVSPKSGRAVSRDAGAPYR 180 Query: 181 EKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LPSFL + E+ ++ + +LT +FL ++ L+ L RE + L Sbjct: 181 DQLLPLPSFLVEGERQPGSEITFADISQGLRLTAFFLARHVLEPQGHAPSLSREELVKAL 240 >gi|307946583|ref|ZP_07661918.1| DNA repair protein RecO [Roseibium sp. TrichSKD4] gi|307770247|gb|EFO29473.1| DNA repair protein RecO [Roseibium sp. TrichSKD4] Length = 256 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 98/242 (40%), Positives = 141/242 (58%), Gaps = 4/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+LG R +GE ++ILEVMT YGRHLG VR G+S QP +Q GN ++V WR+ Sbjct: 1 MEWTATGIVLGSRKHGENDVILEVMTETYGRHLGLVRGGRSRTRQPQIQPGNELQVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E L A+L++S L L+G+Q + L R LPER+P LY L + L+ Sbjct: 61 RLPEQLGTYSIEPLRLRAAELMASPLGLHGVQHLGALLRMLPERDPHAALYRALTLVLDQ 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL +GFGLDL+ C TG +DL +VSPKSG AV R G PY Sbjct: 121 LQDGDIGPPLLIRFELELLNELGFGLDLSCCAATGSQEDLAYVSPKSGRAVSRDAGQPYH 180 Query: 181 EKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+L LP FL ++ ++ L + F+LT +FL ++ LR+ L + Sbjct: 181 DKLLPLPDFLIDGQRQPGSELLFKDLSNGFKLTRFFLARHEKWQTDPAIESLRQQLLQTI 240 Query: 237 LE 238 + Sbjct: 241 EK 242 >gi|149913474|ref|ZP_01902007.1| DNA repair protein RecO [Roseobacter sp. AzwK-3b] gi|149812594|gb|EDM72423.1| DNA repair protein RecO [Roseobacter sp. AzwK-3b] Length = 244 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 4/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R++GE ++I+EV T ++GRH G VR G S ++ P+LQ G + + WR+ Sbjct: 1 MEWRDQGILLSTRTHGETSVIIEVFTPEHGRHAGVVRGGTSRKLAPVLQPGAQLDLRWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LP+RE LY L+ Sbjct: 61 RLEDHIGTFTVEPVRSRAAASMGDRLSLAGLNAVTALLLFCLPDREAHRRLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLP 178 V ++ E+ LL +GFGLDL+ C V G DL +VSP+SG AV R+ Sbjct: 121 LLGQGDVWPLAYLNWEMALLDEMGFGLDLSGCAVMGPQANDLSYVSPRSGRAVSRAGAGE 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA-LQHNIIHCHLLRENFLGK 235 +A+++L LP+ L DA+ + FQ+T +FL + + R+ F+ + Sbjct: 181 WADRLLPLPACLLGAGPAPDAE-VAEGFQVTGHFLQNHLAPELGNKPLPAARQRFVDR 237 >gi|146341374|ref|YP_001206422.1| DNA repair protein RecO [Bradyrhizobium sp. ORS278] gi|166221887|sp|A4YWC5|RECO_BRASO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146194180|emb|CAL78201.1| putative DNA repair protein RecO (Recombination protein O) [Bradyrhizobium sp. ORS278] Length = 248 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 140/241 (58%), Gaps = 2/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG+R +GE + ++E++TR++GRHLG VR RM+P+LQ GN VR WR+ Sbjct: 1 MEWTDDGIVLGLRRHGESSAVVELLTREHGRHLGLVRGAAGKRMRPVLQPGNTVRAIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + + L A+L+S+S YG+ + L R LPER+P ++Y L L+ Sbjct: 61 RLDEHLGMYAVDGLTLRAAELMSASHGAYGVTHLASLARLLPERDPHEDMYFRLEHALDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ EL +L +GFGLDL C TG T DL++VSPKSGGAV R+ G P+A Sbjct: 121 FADAGAAAAHIVRFELAILTELGFGLDLESCAATGETSDLIYVSPKSGGAVSRTAGAPWA 180 Query: 181 EKMLVLPSFLW--KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP FL E+ L F+LT FL ++ L+ RE F+ + Sbjct: 181 DRLLPLPPFLRESDEDHGWSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR 240 Query: 239 L 239 Sbjct: 241 A 241 >gi|304392068|ref|ZP_07374010.1| DNA repair protein RecO [Ahrensia sp. R2A130] gi|303296297|gb|EFL90655.1| DNA repair protein RecO [Ahrensia sp. R2A130] Length = 241 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 94/240 (39%), Positives = 141/240 (58%), Gaps = 4/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AI+LGVR +GE +++ E+MTRQ GRHLG V G+S M+PILQ GN V WR+ Sbjct: 1 MEWTDQAIVLGVRKHGETSVVAELMTRQRGRHLGLVHGGRSRTMRPILQPGNRVTATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+FR E A+L+ + +Y LQ++ R L ER+ +LYD L++ L+ Sbjct: 61 RLDEHLGQFRIEADNLRAARLMETDYAIYALQTLASHLRLLAERDAHPQLYDTLDLVLDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++ ++ EL LL +GFGLDL C TG +L+ VSP++G AV + PY Sbjct: 121 LDNPAAAGELVIRFELALLDELGFGLDLNACAATGARANLVSVSPRTGRAVSGAAAAPYG 180 Query: 181 EKMLVLPSFLW----KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LPSFL D ++L F LT +FL++ I+ R++ + + Sbjct: 181 DRLLALPSFLTTAQADRTSGADEETLAQGFALTGHFLHRNVFGARGINPPAERDSLIRAV 240 >gi|255263314|ref|ZP_05342656.1| DNA repair protein RecO [Thalassiobium sp. R2A62] gi|255105649|gb|EET48323.1| DNA repair protein RecO [Thalassiobium sp. R2A62] Length = 242 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 124/239 (51%), Gaps = 3/239 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D+ +L VR +GE I+E+ T ++GRH G VR G S ++ PILQ G + V W++R Sbjct: 3 QWRDEGALLSVRRHGESAAIVEIFTAEHGRHAGIVRGGTSRKIAPILQPGAQLDVVWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 L ++LG F E + S A ++S L L GL ++ L F +PERE LY + ++ Sbjct: 63 LEEHLGSFSVEPVRSRAAAVMSDRLALAGLNAVCALLAFAMPEREAHPSLYRQSTVLMDL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +++ EL LL+ +GFGLDL C VTG + L +VSPKSG AV +A Sbjct: 123 LGNTDAWPLAYLRWELALLEELGFGLDLGSCAVTGSVEGLCYVSPKSGRAVSAEGAGEWA 182 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLE 238 +++L LP L DA+ L + T YFL + + R + L+ Sbjct: 183 DRLLPLPDVLLGVGSAPDAEIL-QGLETTGYFLEHWLARALGDRPVPDARGRMVDALVR 240 >gi|163744852|ref|ZP_02152212.1| DNA repair protein RecO [Oceanibulbus indolifex HEL-45] gi|161381670|gb|EDQ06079.1| DNA repair protein RecO [Oceanibulbus indolifex HEL-45] Length = 240 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 121/242 (50%), Gaps = 4/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ P LQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPEQGRHAGIVRGGTSRKIAPSLQPGAQLDLAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E L S A + L L GL ++ L F LPEREP LY L+ Sbjct: 61 RLEDHIGAFTVEPLRSRAAVAMQDRLALAGLNAVTALLSFCLPEREPHPALYRRTETLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ EL LL+ +G+ LDL C VTGV++DL++VSPKSG AV + Sbjct: 121 MLGQGDVWPLAYLKWELRLLEEMGYALDLESCAVTGVSEDLIYVSPKSGRAVSAKGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLGKLLE 238 AE++L LP+ L + T +FL + + R F+ Sbjct: 181 AERLLPLPAVL--RGGAGSDAEIAQGLVTTGHFLTAHLARDLGGKPLPESRARFIDAFSR 238 Query: 239 LI 240 + Sbjct: 239 RL 240 >gi|56698028|ref|YP_168399.1| DNA repair protein RecO [Ruegeria pomeroyi DSS-3] gi|61214680|sp|Q5LNK7|RECO_SILPO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56679765|gb|AAV96431.1| DNA repair protein RecO, putative [Ruegeria pomeroyi DSS-3] Length = 241 Score = 310 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 134/241 (55%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + I++ T +GRH G VR G S R+ PILQ G + ++WR+ Sbjct: 1 MDWRDQGILLAVRRHGETSAIIDTFTASHGRHAGVVRGGTSRRIAPILQPGAQLDLSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG F E L S A +S L L GL ++V L F LPERE LY L+ Sbjct: 61 RLEDHLGSFTVEPLRSRAAAAMSGRLALAGLNAVVSLLSFCLPEREAHPRLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL +GFGLDL+ C VTG + DL++VSP+SG AV + Sbjct: 121 LLGQDEIWPLAYLRWELALLDTLGFGLDLSSCAVTGNSDDLVYVSPRSGRAVSAGAAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 AE++L LP L E D + + A + T +FL + + + H L + G+LL+L Sbjct: 181 AERLLPLPPCLRGEGPAPDPE-IAQALRTTGHFLE-HRVAPALGHAPLPQAR--GRLLDL 236 Query: 240 I 240 I Sbjct: 237 I 237 >gi|158423630|ref|YP_001524922.1| recombination protein O [Azorhizobium caulinodans ORS 571] gi|158330519|dbj|BAF88004.1| recombination protein O [Azorhizobium caulinodans ORS 571] Length = 245 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 92/240 (38%), Positives = 134/240 (55%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D I+LGVR +GE + I+++MTR+ GRH G VR G S R+ +LQ GN + WR+ Sbjct: 1 MEWTDAGIVLGVRRHGETSAIVDLMTRERGRHAGLVRGGGSRRLAALLQPGNTLHATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG E L ++ S+ +G+ +V L R LPER+P L+ L+ L+ Sbjct: 61 RLEGQLGLMTVEPLTLRSDAIMRSAHGSFGVTHLVGLMRLLPERDPHPGLFASLDAILDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++ + E+ LL +GFGLDLT C TG DL +VSP+SG AV RS G PYA Sbjct: 121 FDEPAHAGELLARFEMALLVELGFGLDLTTCAATGGNNDLAYVSPRSGRAVSRSAGEPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 +K+ LP+FL ++ A ++T +FL+ L+ + R +FL L + Sbjct: 181 DKLFGLPTFLIGGIVPPSLPDMEEALRMTGFFLSTRVLEPRGLALGEARASFLAALRRAL 240 >gi|254461391|ref|ZP_05074807.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2083] gi|206677980|gb|EDZ42467.1| DNA repair protein RecO [Rhodobacteraceae bacterium HTCC2083] Length = 244 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 131/243 (53%), Gaps = 5/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE N I++V T ++GRH G VR G S ++ PILQ G + V+WR+ Sbjct: 1 MEWRDQGILLSVRRHGETNAIIDVFTIEHGRHAGIVRGGTSRKIAPILQPGAQLDVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG + E L S A L L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHLGTYTVEPLRSRAAAALGDRLSLAGLNAVTALLAFALPEREANTRLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ E+ LL+ G GLDL+ C VTG ++L+++SP++G AV V P+ Sbjct: 121 LLGQHEVWPLAYLRFEMALLEACGMGLDLSACAVTGTNENLIYISPRTGRAVSEQVAGPW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN--IIHCHLLRENFLGKLL 237 K+L LP L + DA+ ++ A + T YFL++ L + R ++ Sbjct: 181 VNKLLPLPPILIGQGMGSDAE-IEQALRTTGYFLSQ-KLAPSLGNRSLPEARGRYVDLFS 238 Query: 238 ELI 240 LI Sbjct: 239 RLI 241 >gi|85705116|ref|ZP_01036216.1| DNA repair protein RecO [Roseovarius sp. 217] gi|85670438|gb|EAQ25299.1| DNA repair protein RecO [Roseovarius sp. 217] Length = 244 Score = 308 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 87/239 (36%), Positives = 127/239 (53%), Gaps = 5/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE +I+EV T + GRH G VR G S +M PILQ G + + WR+ Sbjct: 1 MDWRDQGILLSSRRHGESAVIIEVFTPERGRHAGVVRGGASRKMAPILQPGAQLDLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G FR E + S +L + L L GL ++ L F LPERE LY+ L+ Sbjct: 61 RLEDHIGTFRVEPVRSRAG-VLGNPLTLAGLNAVCALLLFALPEREAHGALYERTETLLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLP 178 V ++ EL LL+++GFGLDL+ C V G DL ++SP++G AV R+ Sbjct: 120 LLAESEVWPLAYLHWELALLEDLGFGLDLSTCAVMGEKANDLSYISPRTGRAVSRAGAGE 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA-LQHNIIHCHLLRENFLGKL 236 + +K+L LP L DA+ L +T +FL + Q RE F+ ++ Sbjct: 180 WVDKLLPLPPCLMGHGPAPDAEIL-QGLTVTGHFLRTHLAPQMRNKPLPEARERFVARM 237 >gi|110678689|ref|YP_681696.1| DNA repair protein RecO [Roseobacter denitrificans OCh 114] gi|119361483|sp|Q16AI3|RECO_ROSDO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|109454805|gb|ABG31010.1| DNA repair protein RecO [Roseobacter denitrificans OCh 114] Length = 241 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 121/236 (51%), Gaps = 3/236 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWREEGILLSTRRHGESAAIIEVFTPSHGRHAGVVRGGTSRKIAPILQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGSFLVEPVRSRAAAAMGDRLALAGLNAVTALLGFCLPEREAHRPLYVETERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL ++G+ L L C VTG DL++VSPKSG AV + Sbjct: 121 LLGEGEIWPLAYLRWEVQLLHDMGYALALEACAVTGQRDDLIYVSPKSGRAVSAKGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLG 234 A+++L LP L DA+ + AF T YFL ++ + R F+ Sbjct: 181 ADRLLPLPPILRGIGGGPDAE-IAQAFITTGYFLTEHLARDLGGKPLPEARARFVE 235 >gi|254466686|ref|ZP_05080097.1| DNA repair protein RecO [Rhodobacterales bacterium Y4I] gi|206687594|gb|EDZ48076.1| DNA repair protein RecO [Rhodobacterales bacterium Y4I] Length = 241 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 5/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + I++V T +GRH G VR G RM PILQ G + V WR+ Sbjct: 1 MEWRDHGILLSVRRHGESSAIIDVFTEGHGRHAGVVRGGAGRRMAPILQPGAQLDVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG + E L S A LS L L GL ++ L F LPEREP +LY L+ Sbjct: 61 RLEDHLGSYHAEPLRSRAAAALSGRLALAGLNTVTALLSFCLPEREPHPDLYTRSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+ +GFGLDL+ C VTG L ++SPK+G AV R + Sbjct: 121 LLGNEDLWPLAYLRWELALLEEMGFGLDLSACAVTGSRFGLAYISPKTGRAVSREGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN--IIHCHLLRENFLGKLL 237 A+++L LP + + DA+ + A + T +FL + L + R + L Sbjct: 181 ADRLLPLPPVMLGQGSAADAE-IVQALRATGFFLEAH-LAPSLGNHPLPEARGRLMDLLS 238 Query: 238 ELI 240 + Sbjct: 239 RRL 241 >gi|254450984|ref|ZP_05064421.1| DNA repair protein RecO [Octadecabacter antarcticus 238] gi|198265390|gb|EDY89660.1| DNA repair protein RecO [Octadecabacter antarcticus 238] Length = 242 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 126/240 (52%), Gaps = 3/240 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D+ ++ VR +GE + I+EV T G G VR G S ++ P LQ G + V W++R Sbjct: 3 EWRDEGALIRVRKHGESSAIIEVFTPSRGLTAGIVRGGTSRKIAPTLQPGAQLDVTWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 L +LG F E + S A+++ L L GL ++ L F LP+RE +LY L+ Sbjct: 63 LEDHLGSFTVEPIRSRTAQVMQDRLALAGLNAVTGLLSFLLPDREAHAQLYARTIQLLDL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++Q E+ LL +GFG+DL+ C V+G+ DL +VSP++G AV R +A Sbjct: 123 LGQNDVWPLAYLQWEIALLDEMGFGMDLSACAVSGLNDDLFYVSPRTGRAVSRLAAGEWA 182 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLGKLLEL 239 +++L LP L + D + + A + T +FLN + + + R+ + + L Sbjct: 183 DRLLPLPHVLLGKGDA-DLNEIVLALRTTGHFLNNHLAKSLGNLPIPEARQRLIDAMKRL 241 >gi|83858198|ref|ZP_00951720.1| DNA repair protein RecO [Oceanicaulis alexandrii HTCC2633] gi|83853021|gb|EAP90873.1| DNA repair protein RecO [Oceanicaulis alexandrii HTCC2633] Length = 242 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 2/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+ VR +GE + ++EV+T ++GRH G VR G+S M+PILQ GN +R WR+ Sbjct: 1 MEWTASGRIVAVRPHGETSAVIEVLTAEHGRHAGLVRGGRSKAMRPILQPGNRIRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG F E + L+ L L GL + + LPERE + D + ++ Sbjct: 61 RLESHLGGFAVEAEDLSAGVLMEDPLALSGLNAACAMASICLPEREEHPAVADAFEVLIS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + P + ++V+ E LL ++G+GLDL +C TGV L++VSPKSG AV G PY Sbjct: 121 ALEDPDLWPALYVRWEAGLLADLGYGLDLRRCAATGVETGLVYVSPKSGRAVSAEAGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 ++ML LP F+ Q + + + +LT +F+ + L R + +L Sbjct: 181 RDRMLALPGFMKGGGQVSE-GDVGAGLKLTAHFIERRVLWPADRMLPDARTRMIERL 236 >gi|220923264|ref|YP_002498566.1| DNA repair protein RecO [Methylobacterium nodulans ORS 2060] gi|254764644|sp|B8IL75|RECO_METNO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219947871|gb|ACL58263.1| DNA repair protein RecO [Methylobacterium nodulans ORS 2060] Length = 246 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 96/239 (40%), Positives = 136/239 (56%), Gaps = 5/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ ++LG R +GE +++LE+MT +GRHLG V G+S RMQP+LQ GN VR WR+ Sbjct: 1 MQWSDEGLVLGARRHGETSVVLELMTAGHGRHLGLVHGGRSRRMQPVLQPGNRVRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG F E +ES +L+ S L LYGL L R LPER+P LY + + Sbjct: 61 RLDEGLGHFAVEPIESAAGRLMGSRLALYGLAHAAALLRLLPERDPHPSLYAAAQVLVAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P++ + V+ EL +L ++GFGLDL+ C TG L +VSPKSG AV + G P+ Sbjct: 121 LTDPAIAPALMVRFELAVLADLGFGLDLSACAATGSNAYLAYVSPKSGRAVSAAAGEPWR 180 Query: 181 EKMLVLPSFLW-----KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +++L LP FL T ++ F LT YFL+++ + RE F+ Sbjct: 181 DRLLALPDFLVAREAGGTGATPTPRDVRQGFTLTGYFLDQHVWHPRGVAPPEARELFVA 239 >gi|319405460|emb|CBI79079.1| DNA repair protein RecO [Bartonella sp. AR 15-3] Length = 248 Score = 303 bits (778), Expect = 9e-81, Method: Composition-based stats. Identities = 105/235 (44%), Positives = 150/235 (63%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEPAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+SH ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDSHASRLIVLPEALYSLQLMASHLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FDDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLCYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L+LP FL ++ ID D + LTD+FL +Y + I LR + + Sbjct: 181 DKLLLLPQFLVQKTACPIDFDDINKGLTLTDFFLTRYVWEARGIKQPSLRVSLIQ 235 >gi|83855024|ref|ZP_00948554.1| DNA repair protein RecO [Sulfitobacter sp. NAS-14.1] gi|83842867|gb|EAP82034.1| DNA repair protein RecO [Sulfitobacter sp. NAS-14.1] Length = 245 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 123/237 (51%), Gaps = 3/237 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPERGRHAGIVRGGTSRKIAPILQPGAQLDIAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGAFTVEPVRSRAALAMHDRLSLAGLNAVTGLLAFALPEREAHPPLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL +G+GLDL+ C VTG T L++VSPK+G AV R + Sbjct: 121 LLGQGDLWPLAYLQWEISLLDELGYGLDLSACAVTGRTSGLVFVSPKTGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGK 235 +KML L L E DA + AF+ T YFL ++ + R ++ Sbjct: 181 VDKMLPLSPVLRGEGDASDA-DIALAFKTTGYFLERHLARDLGDKPLPEARARYVEA 236 >gi|163793044|ref|ZP_02187020.1| GTP-binding protein Era [alpha proteobacterium BAL199] gi|159181690|gb|EDP66202.1| GTP-binding protein Era [alpha proteobacterium BAL199] Length = 253 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 5/241 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W D+ I+L +++GE + I+ ++TR +GRH G VR S R + + Q GN V WR+R Sbjct: 3 DWTDEGIVLAAKAHGEGSAIVVLLTRDHGRHAGLVRGAFSGRARGVYQPGNRVTAEWRAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 LA +LG + E+ H A +L L L GL + + LPEREP +++D L L+ Sbjct: 63 LADHLGNYTCELGHGHAAAVLDDPLKLAGLSAACAIAEASLPEREPHPQVHDGLVALLDA 122 Query: 121 HKIP---SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 P ++V+ E+ +L ++G+GLDL C TG DL +VSP++G AV + G Sbjct: 123 MAEPELGDAWIAVYVRWEIGVLADLGYGLDLESCAATGANDDLAYVSPRTGRAVSLAAGE 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 PY +++L LP FL D D L L+ +F+ ++ + R F+ + Sbjct: 183 PYRDRLLSLPRFLIGRGGG-DQDDLFRGLALSGFFMERHVFATHGRQPPPARTRFVERFA 241 Query: 238 E 238 Sbjct: 242 R 242 >gi|149200802|ref|ZP_01877777.1| DNA repair protein RecO [Roseovarius sp. TM1035] gi|149145135|gb|EDM33161.1| DNA repair protein RecO [Roseovarius sp. TM1035] Length = 244 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 86/238 (36%), Positives = 128/238 (53%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE ++I+EV T + GRH G VR G S +M P+LQ G + + WR+ Sbjct: 1 MDWRDQGILLNSRRHGESSVIIEVFTPERGRHAGVVRGGASRKMAPVLQPGAQLDLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G FR E L+S A + + L GL ++ L F LPERE ELY I L+ Sbjct: 61 RLEDHIGTFRVEPLKSR-AWTMGDRMALAGLNAVCALLLFVLPEREAHAELYRKTLILLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLP 178 P + ++ E+ LL+ +GFGLDL +C V G DL ++SPK+G AV R+ Sbjct: 120 ILDQPEIWTLAYLNWEMALLEEMGFGLDLRRCAVLGEKANDLSYISPKTGRAVSRAGAGE 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA-LQHNIIHCHLLRENFLGK 235 +A+++L LP L D + L F++T FL + Q R ++ + Sbjct: 180 WADRLLPLPPCLMGHGPAPDGEIL-QGFEVTGQFLRNHLAPQLGNRPLPEARARYVAR 236 >gi|182679932|ref|YP_001834078.1| DNA repair protein RecO [Beijerinckia indica subsp. indica ATCC 9039] gi|238691211|sp|B2IBG3|RECO_BEII9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|182635815|gb|ACB96589.1| DNA repair protein RecO [Beijerinckia indica subsp. indica ATCC 9039] Length = 250 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 92/240 (38%), Positives = 128/240 (53%), Gaps = 2/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ +I+G+R YGE ILEV T +GRH G VR G R++ +LQ GN WR+ Sbjct: 1 MEWHDEGLIIGLRRYGETGAILEVFTPAHGRHFGLVRGGFGRRLRALLQPGNQADFTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL Q LG E + +L +S L L G+ I L R LPER+P ELY ++ + L Sbjct: 61 RLDQQLGLLAVEPTKLMTTRLFASGLALQGMNLIAALLRLLPERDPHPELYAVVRVLLEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+V + + EL +L GFGLDL+ C TG TQ+L++VSPKSG AV G PY Sbjct: 121 LDEPAVAPILLARFELAMLTETGFGLDLSACAATGATQELIYVSPKSGRAVSARAGAPYH 180 Query: 181 EKMLVLPSFLWKEE--QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP F + + +++ F LT +FL + R FL + + Sbjct: 181 DKLLGLPPFFLDGSLLKNPTLEEVEAGFALTGHFLMRDLFGPRGQTLPDARHAFLAETAK 240 >gi|254436668|ref|ZP_05050162.1| DNA repair protein RecO [Octadecabacter antarcticus 307] gi|198252114|gb|EDY76428.1| DNA repair protein RecO [Octadecabacter antarcticus 307] Length = 242 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 3/240 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D+ ++ VR +GE + I+EV T G G VR G S ++ P LQ G + V W++R Sbjct: 3 EWRDEGALVRVRKHGESSAIIEVFTASRGLTAGIVRGGTSRKIAPTLQPGAQLDVTWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 L +LG F E + S A+++ L L GL ++ L F LP+RE LY L+ Sbjct: 63 LEDHLGSFTVEPIRSRTAQVMQDRLALAGLNAVTGLLSFLLPDREAHAPLYARTIQLLDL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++Q E+ LL +GFG+DL+ C V+G+ DL +VSP++G AV R +A Sbjct: 123 LGQNDVWPLAYLQWEVALLDEMGFGMDLSACAVSGLNDDLFYVSPRTGRAVSRLAAGEWA 182 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLEL 239 +++L LP L + D + + A + T +FLN + + R+ + + L Sbjct: 183 DRLLPLPHVLLGKGDA-DLNEIVLALRTTGHFLNNHLAKSLGDRPIPEARQRLIDAMKRL 241 >gi|298291623|ref|YP_003693562.1| DNA repair protein RecO [Starkeya novella DSM 506] gi|296928134|gb|ADH88943.1| DNA repair protein RecO [Starkeya novella DSM 506] Length = 243 Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 95/229 (41%), Positives = 129/229 (56%), Gaps = 1/229 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILG+R +GE N I+E+MT +GRHLG VR G S R LQ GN V+ WR+ Sbjct: 1 MEWSDEGIILGLRRHGEGNAIVELMTAAHGRHLGLVRGGGSRRQAAALQPGNGVQATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F EV +L+ ++ + L I L R LPER+P EL+D+L + Sbjct: 61 RLDEHLGTFALEVTTPRAGRLMGAAHSAFALSHIGSLIRMLPERDPHPELHDVLTAMVEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + G + + ELM+L +GFGLDL C TG DLL+VSPKSG AV R G P+ Sbjct: 121 LDEPRLTGMMMARFELMMLSELGFGLDLESCAATGGRNDLLYVSPKSGRAVSRDAGEPWR 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 ++L LP FL E + + +AF LT +FL + + I Sbjct: 181 AQLLNLPYFLIGEVAEPPSPGDVDAAFDLTGHFLARRVFEPRGIPMPES 229 >gi|154247809|ref|YP_001418767.1| DNA repair protein RecO [Xanthobacter autotrophicus Py2] gi|238686793|sp|A7IM67|RECO_XANP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|154161894|gb|ABS69110.1| DNA repair protein RecO [Xanthobacter autotrophicus Py2] Length = 242 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 88/235 (37%), Positives = 127/235 (54%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE N I+E++TR GRHLG VR G S R P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGEGNAIVELLTRLRGRHLGMVRGGASRRQAPLLQPGNTVSATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E L+ + +G + + LPER+P L+ + L+ Sbjct: 61 RLDEHMGNYALEPAVVRTEVLMRAPHAAFGFTHMAQILHLLPERDPHEGLFLTVGAILDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + G++ + EL LL +GFGL+L C TG +DL++VSPKSG AVC G PYA Sbjct: 121 FENRESAGRLLARFELALLAELGFGLELETCAATGRREDLVYVSPKSGRAVCGEAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +++ LP FL A ++ A +LT YFL L+ + R F+ Sbjct: 181 DRLFALPRFLVDGTAPP-AGDVEDALRLTGYFLLTRVLEPRGLGLSDARAAFISA 234 >gi|163738241|ref|ZP_02145657.1| DNA repair protein RecO [Phaeobacter gallaeciensis BS107] gi|161388857|gb|EDQ13210.1| DNA repair protein RecO [Phaeobacter gallaeciensis BS107] Length = 241 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 3/236 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ I+L +R +GE I++ T ++GRH G VR G RM P+LQ G + + WR+ Sbjct: 1 MEWRDEGILLTMRRHGESAAIVDAFTAEHGRHAGIVRGGAGRRMAPVLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S A +SS L L GL ++ L F LPERE ELY L+ Sbjct: 61 RLEDHLGSYQAELIRSRAATAMSSRLALAGLNAVTALLAFCLPEREAHPELYLRSTQILD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL+ +GFGL+ +C VTG DL++VSPKSG AV R + Sbjct: 121 LLGRDDIWPLAYLRWEVALLEEMGFGLEFEQCAVTGSRLDLIYVSPKSGRAVSRRGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL-NKYALQHNIIHCHLLRENFLG 234 A++ML LP L +++ + +A T +FL N+ A R + Sbjct: 181 ADRMLPLPPVLMGRGGAENSE-IVTALSTTGFFLQNRLAPSLGNHPLPEARGRLID 235 >gi|163740179|ref|ZP_02147573.1| DNA repair protein RecO [Phaeobacter gallaeciensis 2.10] gi|161386037|gb|EDQ10412.1| DNA repair protein RecO [Phaeobacter gallaeciensis 2.10] Length = 241 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 127/240 (52%), Gaps = 3/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ I+L +R +GE I++ T ++GRH G VR G RM P+LQ G + + WR+ Sbjct: 1 MEWRDEGILLTMRRHGESAAIVDAFTAEHGRHAGIVRGGAGRRMAPVLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S A +SS L L GL ++ L F LPERE ELY L+ Sbjct: 61 RLEDHLGSYQAELIRSRAATAMSSRLALAGLNAVTALLAFCLPEREAHPELYLRSTQILD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL+ +GFGL+ +C VTG DL++VSPKSG AV R + Sbjct: 121 LLGRDDIWPLAYLRWEVALLEEMGFGLEFEQCAVTGSRLDLIYVSPKSGRAVSRRGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL-NKYALQHNIIHCHLLRENFLGKLLE 238 A++ML LP L + + +A T +FL N+ A R + L Sbjct: 181 ADRMLPLPPVLMGRGGA-ENSEIVTALSTTGFFLQNRLAPSLGNHPLPEARGRLIDVLSR 239 >gi|83941547|ref|ZP_00954009.1| DNA repair protein RecO, putative [Sulfitobacter sp. EE-36] gi|83847367|gb|EAP85242.1| DNA repair protein RecO, putative [Sulfitobacter sp. EE-36] Length = 245 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 123/237 (51%), Gaps = 3/237 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPERGRHAGIVRGGTSRKIAPILQPGAQLDIAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGAFTVEPVRSRAALAMHDRLSLAGLNAVTGLLAFALPEREAHAPLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL +G+GLDL+ C VTG T L++VSPK+G AV R + Sbjct: 121 LLGQGDLWPLAYLQWEISLLDELGYGLDLSACAVTGRTSGLVFVSPKTGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGK 235 +KML L L E DA + AF+ T YFL ++ + R ++ Sbjct: 181 VDKMLPLSPVLRGEGDASDA-DIALAFKTTGYFLERHLARDLGDKPLPEARARYVEA 236 >gi|86135730|ref|ZP_01054309.1| DNA repair protein RecO [Roseobacter sp. MED193] gi|85826604|gb|EAQ46800.1| DNA repair protein RecO [Roseobacter sp. MED193] Length = 244 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I++V T +GRH G V G S + P+LQ G + + WR+ Sbjct: 1 MEWRDHGILLTRRRHGEGAAIIDVFTEHHGRHAGIVHGGASRKKAPVLQPGAQLDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG ++ E L S A LS L L GL ++ L F LPER +LY L+ Sbjct: 61 RLQEHLGSYQAEPLRSRAAAALSGRLALAGLNAVTGLLGFCLPERAAYPDLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + +++ E+ LL +GFGLDL+ C V+G +DL ++SPK+G AV R + Sbjct: 121 LLEQEEIWPLAYLRWEMALLAAMGFGLDLSACAVSGSNEDLAYISPKTGRAVSRQEAGQW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL-NKYALQHNIIHCHLLRENFLGKLLE 238 ++L LP L + D + + + T +FL + A R F+ + Sbjct: 181 VNRLLPLPPVLRGLGEAPDHE-VAEGLRTTGFFLSERLAPNLGNQPLPEARGRFIDAFMR 239 Query: 239 LI 240 + Sbjct: 240 RL 241 >gi|114765537|ref|ZP_01444645.1| DNA repair protein RecO [Pelagibaca bermudensis HTCC2601] gi|114542130|gb|EAU45162.1| DNA repair protein RecO [Roseovarius sp. HTCC2601] Length = 242 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 3/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + ILEV T ++GRH+G +R G S ++ P LQ G + + WR+ Sbjct: 1 MDWRDTGILLSTRRHGETSAILEVFTAEHGRHMGVLRGGTSRKIAPSLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G + E S A +S L L GL ++V L F LPERE LY L+ Sbjct: 61 RLEDHMGAWTVEPQRSRAASAMSDRLSLAGLNAVVALLSFCLPEREAHPALYARTESLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL +GFGLDL+ C VTG + L +VSP++G AV + Sbjct: 121 LLAERELWPLAYMRWEMALLDEMGFGLDLSACAVTGTNEPLDYVSPRTGRAVSAFGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN-KYALQHNIIHCHLLRENFLGKLLE 238 ++L LP + D + L A + T +FL + A R FL +L Sbjct: 181 VARLLPLPPVMLGRGSAPDGEIL-DALRTTGHFLENRLAPALGDRPLPAARGLFLDRLAR 239 >gi|163733859|ref|ZP_02141301.1| DNA repair protein RecO [Roseobacter litoralis Och 149] gi|161392970|gb|EDQ17297.1| DNA repair protein RecO [Roseobacter litoralis Och 149] Length = 241 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 3/236 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWREEGILLSTRRHGESAAIIEVFTPSHGRHAGVVRGGTSRKIAPILQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGSFHVEPVRSRAAAAMGDRLALAGLNAVTALLGFCLPEREAHRALYLETERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + +++ E+ LL +G+ L+L +C VTG DL++VSPKSG AV + Sbjct: 121 LLEEGELWPLAYLRWEVQLLHEMGYALELDQCAVTGQRDDLIYVSPKSGRAVSAQGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLG 234 AE++L LP L DA+ + AF T YFL ++ + R F+ Sbjct: 181 AERLLPLPPILRGVGGGPDAE-IAQAFVTTGYFLTEHLARDLGGKPLPEARARFVE 235 >gi|170742438|ref|YP_001771093.1| DNA repair protein RecO [Methylobacterium sp. 4-46] gi|168196712|gb|ACA18659.1| DNA repair protein RecO [Methylobacterium sp. 4-46] Length = 267 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 96/239 (40%), Positives = 134/239 (56%), Gaps = 5/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ ++LG R GE ++LE+MT +GRHLG V G+S RMQP+LQ GN VR WR+ Sbjct: 22 MQWSDEGLVLGARRLGETGVVLELMTAAHGRHLGLVHGGRSRRMQPVLQPGNRVRAVWRA 81 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG F E L+S +L+ S L LYGL L R LPER+P LY+ + ++ Sbjct: 82 RLDDGLGSFAVEPLDSAAGRLIGSRLALYGLAHAAALLRLLPERDPHPGLYEAARVLIDH 141 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ + V+ EL +L +GFGLDL+ C TG L +VSPKSG AV + G P+ Sbjct: 142 LADAAIAPPLMVRFELAVLAELGFGLDLSACAATGSNAYLAYVSPKSGRAVSAAAGEPWR 201 Query: 181 EKMLVLPSFLW-----KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +++L LP FL T A ++ F LT YFL+++ + RE F+ Sbjct: 202 DRLLALPDFLVAREAGGTGATPTARDVRQGFTLTGYFLDQHVWAPRGLAPPEARERFVA 260 >gi|144899859|emb|CAM76723.1| DNA repair protein RecO [Magnetospirillum gryphiswaldense MSR-1] Length = 250 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 96/237 (40%), Positives = 132/237 (55%), Gaps = 3/237 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+L VR GE I+ + TR +GRH G V G + LQ GNLV+ +WR+ Sbjct: 1 MDWTDDGIVLAVRRLGEAGIVASLFTRSHGRHPGMVPGGAGRANRAALQPGNLVQASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 RL + LG +R E+ E+H AK L + L L S L LPER+P L+D L+ L Sbjct: 61 RLPEQLGTYRLELAEAHSAKALDDAGCLAALTSACALCEALLPERQPHAPLFDALSALLV 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 PS ++V EL LL+ +G+GLDL+ C TG T DL++VSPKS AV G P+ Sbjct: 121 SLTAPS-WPSVYVHWELALLRGLGYGLDLSACAATGATTDLIYVSPKSARAVSAQAGQPH 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 A K+L LP+FL + + DA + + LT YF+ ++ LQ I R + +L Sbjct: 180 AHKLLPLPAFLLGKSEG-DATDIAAGLTLTGYFIERHLLQQRHIAMPPARLRLVDRL 235 >gi|114770109|ref|ZP_01447647.1| DNA repair protein RecO [alpha proteobacterium HTCC2255] gi|114548946|gb|EAU51829.1| DNA repair protein RecO [alpha proteobacterium HTCC2255] Length = 243 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 88/238 (36%), Positives = 135/238 (56%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + +I+ VR YGE ++I++ +T ++GRHLG VR G S +M +Q G+ V++ WR+ Sbjct: 1 MEWTSEGVIVSVRKYGENSVIIDTLTPKHGRHLGVVRGGASRKMAATIQPGSQVKLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG FR E LES + + L L L SI + F PER P ELY+ ++ Sbjct: 61 RLEEHLGNFRVEQLESR-SDMFDDRLRLAALSSICSIVTFSFPERMPVAELYNSTLNLMD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ EL +L+ +GFGLDLT C VT VTQDL++VSPKSG AV R + Sbjct: 120 TLNTGGDWKPLYALWELQVLEEMGFGLDLTSCAVTNVTQDLIYVSPKSGRAVSRKAAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKL 236 E++L LPSFL + +T + + + ++ + T +FL+ + R + +L Sbjct: 180 KERLLPLPSFLRNKFETANHEDILNSLKTTGHFLSSWLATSLGERKLPEARNRLISRL 237 >gi|254476248|ref|ZP_05089634.1| DNA repair protein RecO [Ruegeria sp. R11] gi|214030491|gb|EEB71326.1| DNA repair protein RecO [Ruegeria sp. R11] Length = 241 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 83/241 (34%), Positives = 131/241 (54%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L +R +GE + I+++ T ++GRH G +R G S +M PILQ G + + WR+ Sbjct: 1 MEWRDQGILLRMRRHGEGSAIVDMFTAEHGRHAGVIRGGASRKMAPILQPGAQLDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S LS L L GL ++ L F LP+REP +LY L+ Sbjct: 61 RLEDHLGSYQAELMRSRAGAALSGRLALAGLNAVTGLLAFCLPDREPHPDLYLRSERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL+ +GFGLDL+ C V+G +L+++SPKSG AV R+ + Sbjct: 121 LLGQDEIWPLAYLQWEMALLEELGFGLDLSCCAVSGALDELIYISPKSGRAVSRASAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN--IIHCHLLRENFLGKLL 237 A ++L LP+ + E + + L T +FL + L + R FL L Sbjct: 181 AHRLLPLPAVMRGEGEAGTGEIL-QGLSTTGFFLE-HRLAPSLGNTPLPEARGRFLDVLT 238 Query: 238 E 238 Sbjct: 239 R 239 >gi|84515166|ref|ZP_01002529.1| DNA repair protein RecO [Loktanella vestfoldensis SKA53] gi|84511325|gb|EAQ07779.1| DNA repair protein RecO [Loktanella vestfoldensis SKA53] Length = 243 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 3/239 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W+DDA IL +R +GE + I+EV + +GRH G VR G S ++ P++Q G V V W +RL Sbjct: 4 WRDDAAILAMRPFGESSAIIEVFSANHGRHAGVVRGGASRKIAPLIQPGAQVNVAWAARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNCH 121 +LG F E + S A ++ L L GL ++ L LPERE LY L+ Sbjct: 64 DDHLGSFTVEPVRSRNAAAMADRLSLAGLNAVCALLLMVLPERESHPLLYQRSIALLDLL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 +V +++ E LL+ +GFGLDL+ C +GV +DL +VSPKSG AV R +A+ Sbjct: 124 DQRAVWPLAYLRWEQALLEEMGFGLDLSACAASGVNEDLAFVSPKSGRAVSRDAAGVWAD 183 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLEL 239 ++L LP L + + + A T +F+ ++ + R + ++ Sbjct: 184 RLLPLPPVLAGKGDASGVE-IAKALGTTGFFIENRLIKGLGDRNVPAARARLIDAIMRA 241 >gi|217979938|ref|YP_002364085.1| DNA repair protein RecO [Methylocella silvestris BL2] gi|254764645|sp|B8EMP4|RECO_METSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|217505314|gb|ACK52723.1| DNA repair protein RecO [Methylocella silvestris BL2] Length = 247 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 132/236 (55%), Gaps = 3/236 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +I+GVR YGE ++ILE MTR +GRHLG VR G+S RM+ +LQ GN + WR+ Sbjct: 1 MEWRDEGLIIGVRQYGEASVILEAMTRGHGRHLGLVRGGRSQRMRAVLQPGNSAELVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E + A L++S+ L+ + I L R + ER+P +LY+ + Sbjct: 61 RLDEQLGTWAIEPTQLRAATLMASAEALHAVGLICALLRLIAERDPHPDLYETAVLIAGH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + V++E+ +L+ GFGLDL++C TG +DL +VSPKSG AV + G PY Sbjct: 121 IGDERLAP-LLVRLEIEILRETGFGLDLSRCAATGAREDLAYVSPKSGRAVSLAAGAPYR 179 Query: 181 EKMLVLPSFLWKE--EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 E++L LP FL E + F LT +FL + R +L Sbjct: 180 ERLLPLPPFLRDEAPGGEPTPQDVLDGFGLTGFFLKRDVFTPRGQGMPEARRAYLA 235 >gi|221641177|ref|YP_002527439.1| DNA repair protein RecO [Rhodobacter sphaeroides KD131] gi|332560104|ref|ZP_08414426.1| DNA repair protein RecO [Rhodobacter sphaeroides WS8N] gi|254764657|sp|B9KSB0|RECO_RHOSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|221161958|gb|ACM02938.1| DNA repair protein recO [Rhodobacter sphaeroides KD131] gi|332277816|gb|EGJ23131.1| DNA repair protein RecO [Rhodobacter sphaeroides WS8N] Length = 239 Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 127/242 (52%), Gaps = 7/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E L S A LL L L GL +I + LPEREP L+ L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTA-LLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV R + Sbjct: 121 ALDRPG-WPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSRGAAGGW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A+++ LP L + A+ ++ +T +FL + L N R + L Sbjct: 180 ADRLFPLPLALLG-QGPASAEEVRQGLAITGHFLGRE-LAPLLNGRPMPEARARLMELLA 237 Query: 238 EL 239 Sbjct: 238 RA 239 >gi|209964784|ref|YP_002297699.1| DNA repair protein RecO, putative [Rhodospirillum centenum SW] gi|238058647|sp|B6IMY9|RECO_RHOCS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209958250|gb|ACI98886.1| DNA repair protein RecO, putative [Rhodospirillum centenum SW] Length = 250 Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 125/242 (51%), Gaps = 5/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DDAI+L R +GE + ++TR +GRH G V GQS RM+P+L+ GN V W + Sbjct: 1 MEWTDDAIVLSARPHGETAALAVLLTRGHGRHAGLVHGGQSGRMRPVLEPGNRVAARWAA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 RL + LG E+ + A LL L L L S L LPEREP L+D + Sbjct: 61 RLVEQLGTLALELERATAAGLLEDPLRLAALSSACALVDAALPEREPHPALFDATLALFD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + V +I+V+ E+ LL+ GFGLD C TG+T + L +VSP++G AV S G Sbjct: 121 ALQT-EVWAEIYVRWEIGLLEEAGFGLDFGSCAATGITDNDQLAYVSPRTGRAVSLSAGE 179 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 PY +++L LP FL A+ + LT +FL+++ R F+ + Sbjct: 180 PYRDRLLALPPFLVGR-SAGGAEEVVQGLALTGHFLDRHLFALRHAEVPAARTRFVDRYR 238 Query: 238 EL 239 + Sbjct: 239 KA 240 >gi|126461085|ref|YP_001042199.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17029] gi|166221908|sp|A3PGG1|RECO_RHOS1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|126102749|gb|ABN75427.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17029] Length = 239 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 127/242 (52%), Gaps = 7/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E L S A LL L L GL +I + LPEREP L+ L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTA-LLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV R + Sbjct: 121 ALDRPG-WPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSRGAAGGW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A+++ LP L + A+ ++ +T +FL + L N R + L Sbjct: 180 ADRLFPLPLALLG-QGPASAEEVRQGLAITGHFLGRE-LAPLLNGRPLPEARARLMELLA 237 Query: 238 EL 239 Sbjct: 238 RA 239 >gi|126733738|ref|ZP_01749485.1| DNA repair protein RecO [Roseobacter sp. CCS2] gi|126716604|gb|EBA13468.1| DNA repair protein RecO [Roseobacter sp. CCS2] Length = 244 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 122/240 (50%), Gaps = 3/240 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+ +A +L R +GE +I+EV + +GRH G VR G S ++ P+LQ G + V W++R Sbjct: 3 EWRSEAALLSSRPFGENGVIIEVFSALHGRHAGVVRGGASRKLAPVLQPGAQLSVAWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNC 120 L +LG F E + S A + L L GL ++ L LPERE LY+ L+ Sbjct: 63 LESHLGSFAVEPIRSRAAAAMGDRLALAGLNAVCSLLAMVLPEREAHEPLYERTIALLDL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V +++ E LL+ +GF +DL+ C V GV +DL++VSPKSG AV R +A Sbjct: 123 LGQQDVWPLAYLRWEQALLEEMGFAMDLSACAVRGVNEDLIYVSPKSGRAVSREAAGEWA 182 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLEL 239 ++ML LP L + +A + A T YF+ ++ R L ++ Sbjct: 183 DRMLPLPEVLTGKGDASNAQ-IAKALGTTGYFIEHRLIKGLGDRPMPAARTRLLDAIMRA 241 >gi|315499944|ref|YP_004088747.1| DNA repair protein reco [Asticcacaulis excentricus CB 48] gi|315417956|gb|ADU14596.1| DNA repair protein RecO [Asticcacaulis excentricus CB 48] Length = 239 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++DDA +L R +GE ++ +T ++G V G S R++P LQ + VR+++R+ Sbjct: 1 MTFEDDAFVLSARPHGETGAVVHFLTLEHGHIAAHVPGGASRRLKPYLQPASRVRLSYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 R A LG E A++ + L G+Q + R LPERE + +N Sbjct: 61 RTADQLGSATLEPEGDATAEIFDDPMALIGVQCACVMTRAVLPEREAYPGAFYAFETLIN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +P V ++V+ E+ LL+ +GFGLDL+ C V+G DL +VSP+S AV R G PY Sbjct: 121 AFGLPGVWPYVYVRFEMGLLEAVGFGLDLSACAVSGSRDDLAYVSPRSARAVSRREGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP FL + + AD L+ LT +FL ++ +R + + + Sbjct: 181 KDKLLPLPGFLLSSQGGVQADDLRRGLDLTGFFLERHIFHPLNQPLPEIRTRLIDSVRD 239 >gi|77462223|ref|YP_351727.1| DNA repair protein RecO [Rhodobacter sphaeroides 2.4.1] gi|77386641|gb|ABA77826.1| putative RecO protein [Rhodobacter sphaeroides 2.4.1] Length = 239 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 7/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E L S A LL L L GL +I + LPEREP L+ + L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTA-LLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMVLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV + Sbjct: 121 ALDRPG-WPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSSGAAGGW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A+++ LP L + A+ ++ +T +FL + L N R + L Sbjct: 180 ADRLFPLPLALLG-QGPASAEEVRQGLAITGHFLGRE-LAPLLNGRPLPEARARLMELLA 237 Query: 238 EL 239 Sbjct: 238 RA 239 >gi|119370511|sp|Q3J5V8|RECO_RHOS4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 238 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 7/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 1 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E L S A LL L L GL +I + LPEREP L+ + L+ Sbjct: 61 RLDEHMGAFTVEPLRSRTA-LLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMVLLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV + Sbjct: 120 ALDRPG-WPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSSGAAGGW 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A+++ LP L + A+ ++ +T +FL + L N R + L Sbjct: 179 ADRLFPLPLALLG-QGPASAEEVRQGLAITGHFLGRE-LAPLLNGRPLPEARARLMELLA 236 Query: 238 EL 239 Sbjct: 237 RA 238 >gi|300023747|ref|YP_003756358.1| DNA repair protein RecO [Hyphomicrobium denitrificans ATCC 51888] gi|299525568|gb|ADJ24037.1| DNA repair protein RecO [Hyphomicrobium denitrificans ATCC 51888] Length = 239 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 90/237 (37%), Positives = 131/237 (55%), Gaps = 1/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AI+L V+ +GE ++E+ TR +GRHLG V G+S R++PILQ GN V W++ Sbjct: 1 MQWTDEAIVLSVKPHGETAAVIELWTRTHGRHLGLVHGGRSRRLRPILQPGNHVDATWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL+ LG E+ + A+ L + L L ++ L LPER+P LY++ L Sbjct: 61 RLSDQLGHVTIEMRRAFAAETLDDAAALAALSTLTTLTHLLPERDPHPNLYEITLFVLGF 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +V + V+ EL LL+ +GFGLDL++C TG L++VSP++G AV S G PY Sbjct: 121 LNDATVWPALLVRWELALLEELGFGLDLSQCAATGSNDQLIYVSPRTGRAVSASAGEPYR 180 Query: 181 EKMLVLPSFLWKEEQT-IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+L LP+FL K + D ++ F LT +FL L R L L Sbjct: 181 DKLLPLPAFLTKHRSGHVTEDDIRLGFALTGHFLETRVLLPRGQSLPQPRSRLLAHL 237 >gi|319407033|emb|CBI80670.1| DNA repair protein RecO [Bartonella sp. 1-1C] Length = 248 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 149/235 (63%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDLHASRLIVLPEALYSLQLMAFYLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FEDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLYYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L+LP FL ++ +D + + LT++FL +Y I LR + + Sbjct: 181 DKLLLLPKFLVQKNVYPVDFNDISKGLILTNFFLTRYVWDARGIKQSSLRVSLIQ 235 >gi|114570118|ref|YP_756798.1| DNA repair protein RecO [Maricaulis maris MCS10] gi|114340580|gb|ABI65860.1| DNA repair protein RecO [Maricaulis maris MCS10] Length = 234 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 2/229 (0%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 +L VR +GE + I+EV+T + GRH G VR +S M+PILQ GN + VNWR+RL+++LG Sbjct: 1 MLAVRPHGETSAIVEVLTAEQGRHAGLVRGARSRSMRPILQPGNQITVNWRARLSEHLGM 60 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNCHKIPSVI 127 F+ E + ++ L GL S + LPERE ++ + L P + Sbjct: 61 FQIEADDLTAGMVMEDRTALAGLNSACAIAVMGLPEREAHPRVHQGFQLLLGAFDNPDIW 120 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 ++V+ E LL ++G+GLD++ C VTGVT+DL +SP++G AVCR PYA K+L LP Sbjct: 121 PALYVRWEAGLLSDLGYGLDMSACAVTGVTEDLTHISPRTGRAVCREEAAPYAPKLLELP 180 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 F+ + I+A + LT YFL + L R + +L Sbjct: 181 PFMAGSGK-IEAGDIARGLALTGYFLERRVLWPIDKQLPEARGRLMAEL 228 >gi|126726092|ref|ZP_01741934.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2150] gi|126705296|gb|EBA04387.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2150] Length = 245 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 131/241 (54%), Gaps = 4/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+ VR +GE + I+EV T+ GRH G VR S ++ P LQ G V V+WR+ Sbjct: 1 MEWRDQGAIISVRHHGETSAIVEVFTKNQGRHAGVVRGATSRKIAPFLQPGGQVDVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG F E ++S A ++S+ L L GL ++ L +F LPERE LY+ L+ Sbjct: 61 RLNEHLGTFTIEPIQSR-AHVMSNPLALAGLNAVCALLQFTLPERESHPRLYETSIALLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 S ++ E++LL ++GFGLDL++C VTG DL +VSPKSG AV +S + Sbjct: 120 SISETSDWPLDYLHWEMLLLDDLGFGLDLSECAVTGTQGDLAYVSPKSGRAVSKSGAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA-LQHNIIHCHLLRENFLGKLLE 238 A+++L L L + ++ L + T +FL + + R + +L Sbjct: 180 ADRLLPLTPCLIS-DASVGVTELIEGLRTTGHFLENHLAPELGNRPLPEARARMIDRLGR 238 Query: 239 L 239 L Sbjct: 239 L 239 >gi|319404020|emb|CBI77608.1| DNA repair protein RecO [Bartonella rochalimae ATCC BAA-1498] Length = 248 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 149/235 (63%), Gaps = 1/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L H ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALNLHASRLIVLPEALYSLQLMAFYLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FEDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLYYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L+LP FL ++ +D + + LT++FL +Y + I LR + + Sbjct: 181 DKLLLLPQFLVQKSVYPVDFNDISKGLILTNFFLTRYVWEARGIKQLSLRVSLIQ 235 >gi|89070889|ref|ZP_01158124.1| DNA repair protein RecO, putative [Oceanicola granulosus HTCC2516] gi|89043528|gb|EAR49739.1| DNA repair protein RecO, putative [Oceanicola granulosus HTCC2516] Length = 239 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 121/240 (50%), Gaps = 3/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D ++L R +GE +I EV T GRH G VR G+S ++ P+LQ G V V W + Sbjct: 1 MQWRDGGVLLARRGHGESGVIAEVFTETRGRHAGLVRGGRSKQLAPVLQPGEQVEVTWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG +R E L S A +++ L L GL +I L F LPEREP LY L+ Sbjct: 61 RLEEHLGAYRVEPLRSRAALVMNDRLALAGLNAICGLLAFALPEREPHPALYARSVTLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ EL LL+ +GFGLDL+ C VTG L +VSP++G AV + + Sbjct: 121 LLGRTDAWPLAYLHWELALLEELGFGLDLSSCAVTGAEDGLAFVSPRTGRAVSAAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLE 238 A ++L LP L + DA+ L + T +FL + R + L Sbjct: 181 AGRLLPLPPALRGQGPGPDAEIL-EGLRTTGHFLATWLAPALGDRPLPEARARLVALLSR 239 >gi|118587959|ref|ZP_01545369.1| DNA repair protein RecO [Stappia aggregata IAM 12614] gi|118439581|gb|EAV46212.1| DNA repair protein RecO [Stappia aggregata IAM 12614] Length = 251 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 5/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W ++L R +GE ++ILE MT +GRHLG VR G+S R +P+LQ GN + + W++ Sbjct: 1 MEWSGRGVVLTTRKHGENDVILEAMTLDHGRHLGLVRGGRSRRHRPVLQPGNELTLTWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL+ +LG+F E L++SSL L LQ + L R LPER L++ L + L+ Sbjct: 61 RLSDHLGQFHIEPETLRAGDLMTSSLGLAALQHLAFLLRLLPERHTYPRLFNALTVVLDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + ++ EL +L+++G GLDL+ C TG +DL +VSPKS AVCR GLPY Sbjct: 121 LEASDAAAALLIRFELEVLRDLGIGLDLSSCAATGSNEDLAYVSPKSARAVCREAGLPYH 180 Query: 181 EKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LP FL ++ ++ + F LT +FLN+Y +H R L L Sbjct: 181 DRLLPLPGFLLDGQRQAGSELTWADVTQGFDLTSFFLNRYLQEH-GTRDGGTRNQVLTAL 239 Query: 237 LE 238 + Sbjct: 240 EK 241 >gi|23014388|ref|ZP_00054207.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 309 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 91/237 (38%), Positives = 128/237 (54%), Gaps = 3/237 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+L VR +GE + ++TR +GRH G V GQ +PILQ GNLVR W Sbjct: 74 MEWDDDGIVLAVRRHGETGAVASLLTRSHGRHAGLVHGGQGRTNRPILQPGNLVRAKWTG 133 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL + LG F+ E+L ++ A L + L L S L L ER+P + L Sbjct: 134 RLPEQLGNFKLEMLHAYGAAFLDDAARLSALGSACALVETALAERQPHPAC-HAALVALL 192 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I+V EL LL+++GFGLDL+ C TG T DL WVSPK+G AV R+ G PY Sbjct: 193 HALEAESWPSIYVHFELALLRDLGFGLDLSACAATGQTDDLAWVSPKTGRAVSRAAGEPY 252 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+ LP+FL + + DA +++ ++T +FL ++ L R +G+L Sbjct: 253 RDKLFKLPAFLVEGGEG-DAAAIREGLEMTGFFLQRHVLDSRHAVLPAARGRMIGRL 308 >gi|126739720|ref|ZP_01755412.1| DNA repair protein RecO [Roseobacter sp. SK209-2-6] gi|126719366|gb|EBA16076.1| DNA repair protein RecO [Roseobacter sp. SK209-2-6] Length = 251 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 127/241 (52%), Gaps = 3/241 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D I+L R +GE + I++V T ++GRH G VR G S R+ PILQ G + + WR+R Sbjct: 12 EWRDHGILLSARRHGESSAIIDVFTEEHGRHAGVVRGGASRRLAPILQPGAQLDLLWRAR 71 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 L ++LG ++ E L S +S L L GL ++ L F LPEREP LY L+ Sbjct: 72 LEEHLGSYQAEPLRSRAVAAMSGRLALSGLNAVTALLGFCLPEREPHPALYASSERLLDL 131 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + +++ E+ LL+ +GFGLDL C V+G ++L +VSP++G AV R P+ Sbjct: 132 LEQEELWPLAYLRWEMELLEEMGFGLDLLACAVSGRNEELAYVSPRTGRAVSRQEAGPWV 191 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN-KYALQHNIIHCHLLRENFLGKLLEL 239 ++L LP + + + D + + + T YFL + A R FL Sbjct: 192 ARLLPLPPVMLGKGEAPDHE-IAEGLKTTGYFLETRLAPALGNRPLPEARGRFLDAFSRR 250 Query: 240 I 240 + Sbjct: 251 L 251 >gi|259418038|ref|ZP_05741957.1| DNA repair protein RecO [Silicibacter sp. TrichCH4B] gi|259346944|gb|EEW58758.1| DNA repair protein RecO [Silicibacter sp. TrichCH4B] Length = 241 Score = 290 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + ++EV T+ +GRH G VR G S +M P LQ G + + W + Sbjct: 1 MDWRDQGILLTVRRHGESSALIEVFTQAHGRHAGLVRGGASRKMAPHLQPGAQLDLTWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E L S A LS L L GL ++ L F LP+RE ELY L+ Sbjct: 61 RLEDHLGTYKAEPLRSRAASALSGRLALSGLNAVCALLAFALPDREAYSELYHRSEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+++G+GLDL+ C VTG T+ L++VSPK+G AV + + Sbjct: 121 LLDNEDLWPLGYLRWELSLLEDLGYGLDLSCCAVTGATEGLMYVSPKTGRAVSEAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN-KYALQHNIIHCHLLRENFLGKLLE 238 A+++L LP + E D + L +A + T +F K A R FL L Sbjct: 181 ADRLLPLPPVMRGEGDGEDIEIL-TALRTTGFFFESKLAPALGNRPVPEARGRFLDALSR 239 Query: 239 LI 240 + Sbjct: 240 RL 241 >gi|99082396|ref|YP_614550.1| DNA repair protein RecO [Ruegeria sp. TM1040] gi|119361485|sp|Q1GDH8|RECO_SILST RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|99038676|gb|ABF65288.1| DNA repair protein RecO [Ruegeria sp. TM1040] Length = 241 Score = 290 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + ++EV T +G H G VR G S +M P LQ G + + W + Sbjct: 1 MDWRDQGILLTVRRHGESSALIEVFTEDHGLHAGLVRGGASRKMAPHLQPGAQLDLTWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E L S LS L L GL ++ L F LP+R P LY + L+ Sbjct: 61 RLEDHLGTYKAEPLRSRAGMALSGRLALAGLNAVCALLAFALPDRAPYPALYHRSSALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+++G+GLDL+ C TGVTQDL +VSPK+G AV + + Sbjct: 121 LLDSEDLWPLAYLRWELSLLEDLGYGLDLSACAATGVTQDLRYVSPKTGRAVSGAAAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN-KYALQHNIIHCHLLRENFLGKLLE 238 A+++L LP + E D + L +A + T +FL K A R FL L Sbjct: 181 ADRLLPLPPVMRGEGAAEDIEIL-TALRTTGFFLESKLAPALGNRPIPEARGRFLDALAR 239 Query: 239 LI 240 + Sbjct: 240 RV 241 >gi|126728495|ref|ZP_01744311.1| DNA repair protein RecO [Sagittula stellata E-37] gi|126711460|gb|EBA10510.1| DNA repair protein RecO [Sagittula stellata E-37] Length = 241 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 125/238 (52%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE ++IL+V T + GRH G +R G S +M P LQ G + ++WR+ Sbjct: 1 MEWRDTGILLATRRHGETSLILDVFTPERGRHSGVLRGGTSRKMAPHLQPGAQLDLSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E S A+ L L L GL ++V L RF LPER P +LY L+ Sbjct: 61 RLEDHMGAFTVEPQRSRAAQALGDRLALAGLNAVVALLRFCLPERVPHPDLYTFSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + +++ E+ LL+ +GF LDL+ C VTG T+ L++VSPKSG AV + Sbjct: 121 LLDQPDLWPLAYLRWEMALLEEMGFALDLSCCAVTGRTEGLVYVSPKSGRAVTAEGAGNW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN-KYALQHNIIHCHLLRENFLGKL 236 +L LP + D + +A T YFL + A Q R + ++ Sbjct: 181 VHHLLPLPEVMLGRG-AADNPEVATALGTTGYFLEHRLAPQMGDKPVPEARARLIERI 237 >gi|323137541|ref|ZP_08072618.1| DNA repair protein RecO [Methylocystis sp. ATCC 49242] gi|322397167|gb|EFX99691.1| DNA repair protein RecO [Methylocystis sp. ATCC 49242] Length = 241 Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 96/239 (40%), Positives = 138/239 (57%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +++G R +GE ++ILE+MTRQ+GRHLG VR G+S M+P+LQ GNLV +WR+ Sbjct: 1 MEWRDEGLVIGARKHGETSVILELMTRQHGRHLGVVRGGRSQAMRPVLQPGNLVVASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LG F E L S A+ L L+G+ ++ R LPER+P EL++M + Sbjct: 61 RLEVHLGAFAIEPLASRAARYLDRGAALHGVAALAAWLRLLPERDPYEELFEMADAIACR 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + EL LL +GFGLDL C +TG DL +VSPKSG AV R G P+ Sbjct: 121 LDAADFAAPLMARFELALLGALGFGLDLGACALTGARDDLAYVSPKSGRAVSREAGAPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 E++L P+FL + D + +AF+LT YFL + L + R ++ L Sbjct: 181 ERLLPYPAFLREASDVAAVDDVAAAFRLTGYFLTRDVLAPRGVAMPASRALYIDALARA 239 >gi|296444472|ref|ZP_06886437.1| DNA repair protein RecO [Methylosinus trichosporium OB3b] gi|296258119|gb|EFH05181.1| DNA repair protein RecO [Methylosinus trichosporium OB3b] Length = 240 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 91/239 (38%), Positives = 139/239 (58%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +++GVR +GE +ILE+MTR +GRH+G VR G ++ +LQ GN V V WR+ Sbjct: 1 MEWRDEGLVIGVRRHGESAVILELMTRAHGRHMGLVRGGSGRALRSVLQVGNSVEVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F E L S A+L+ + L+G+ + L R LPER+ EL++M + + Sbjct: 61 RLEEHLGAFAVEPLRSRAARLIDRAFALHGVAHLAALLRLLPERDAQRELFEMAELIADR 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + EL LL+ +GFGLD+ +C +TG TQDL +VSPK+G AV R G P+ Sbjct: 121 LDSLDLAPALMARFELALLQALGFGLDVERCALTGATQDLAFVSPKTGRAVTRDAGAPWR 180 Query: 181 EKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L P FL DA L +AF+LT +FL + + R ++G Sbjct: 181 DRLLPFPPFLQDCARAPADASELAAAFRLTGHFLARDVFTPRGLEAPQARALYVGAAAR 239 >gi|329850744|ref|ZP_08265589.1| DNA repair protein RecO [Asticcacaulis biprosthecum C19] gi|328841059|gb|EGF90630.1| DNA repair protein RecO [Asticcacaulis biprosthecum C19] Length = 244 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 2/238 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++D+AI+L + +GE IL V+T +G + V G S RM+ LQ G V +R+R Sbjct: 3 EFEDEAIVLSAKLHGESGAILHVLTENHGVYAAHVAGGASRRMKAALQPGASVLFRFRAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNC 120 ++ LG E S +L S+ L GLQ + R LPERE Y L+ L Sbjct: 63 HSEQLGTASVEASGS-GPDVLDDSVALLGLQCACLMTRQVLPERERHPGAYYALSALLGA 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + I+V+ E LL+ +G+GLDL+ C VTG DL++VSPKS AV R G Y Sbjct: 122 FVAPDIWPAIYVRYEAGLLEELGYGLDLSACAVTGSRDDLVYVSPKSARAVSRGAGEAYR 181 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+LVLP FL + + A + LT +FL ++ + +R L + Sbjct: 182 DKLLVLPQFLLSSQGGLIAGDVGRGLALTGFFLERHVFHPHNKPLPDVRLRLAEALAD 239 >gi|84500557|ref|ZP_00998806.1| DNA repair protein RecO [Oceanicola batsensis HTCC2597] gi|84391510|gb|EAQ03842.1| DNA repair protein RecO [Oceanicola batsensis HTCC2597] Length = 241 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 80/237 (33%), Positives = 131/237 (55%), Gaps = 3/237 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE I +V T GRH G VR S ++ P+LQ G + ++W++ Sbjct: 1 MEWRDQGILLAVRRHGESAAIADVFTPGRGRHAGVVRGATSRKLAPVLQPGAQLDISWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG F E + S A++L L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEEHLGHFTVEPVRSRAAQILGDRLALAGLNAVTALLCFALPEREAHEALYRRTETLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ EL LL+++G+GLDLT+C VTG + L ++SP++G AV + + Sbjct: 121 LLGQMDLWPLAYLHWELALLEDLGYGLDLTECAVTGAREGLDYISPRTGRAVTAAGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNII-HCHLLRENFLGK 235 A+++L LP L ++ + D + + S F++T +FL ++ R+ F+ + Sbjct: 181 ADRLLPLPPCLLRQGEAPD-EEILSGFRVTGHFLAEHLAPELGQKPIPEARQRFVDR 236 >gi|84684348|ref|ZP_01012249.1| DNA repair protein RecO [Maritimibacter alkaliphilus HTCC2654] gi|84667327|gb|EAQ13796.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2654] Length = 246 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 126/242 (52%), Gaps = 7/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L VR +GE ++I+EV T ++GRH G VR G S ++ PILQ G+ + + WR+ Sbjct: 4 MEWRDQGTLLSVRKHGETSVIIEVFTAEHGRHAGVVRGGVSRKIAPILQPGSQLDLVWRA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E ++S A ++ L GL +I L F LPERE LY L+ Sbjct: 64 RLEEHIGAFTVEPVKSRAAAIMGDRNALAGLNAITALLSFALPEREAHPRLYTRSIAMLD 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++Q EL LL+ +G+GLDLT C VTG +DL +VSPKSG AV + Sbjct: 124 LLAETPAWPVGYLQWELALLEELGYGLDLTACAVTGGAEDLAYVSPKSGRAVSAEGAGEW 183 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK---YALQHNIIHCHLLRENFLGKL 236 +++L LP L T D + + T YFL +AL R + +L Sbjct: 184 VDRLLPLPEELLGVV-TQDLAGIPDGLRTTGYFLTHGLAHALGDR--PLPEARARLVDRL 240 Query: 237 LE 238 Sbjct: 241 SR 242 >gi|159042759|ref|YP_001531553.1| DNA repair protein RecO [Dinoroseobacter shibae DFL 12] gi|254790521|sp|A8LLE2|RECO_DINSH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157910519|gb|ABV91952.1| DNA repair protein RecO [Dinoroseobacter shibae DFL 12] Length = 241 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 6/241 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+++ ++L VR +GE ++I+E TR +GRHLG VR G S ++ P+LQ G + + W++R Sbjct: 3 EWREEGVLLSVRPHGETSVIVEAFTRAHGRHLGVVRGGVSRKLAPVLQPGAQLDLRWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 L ++G F E + A +L L L + S + L RF L ER YD L+ Sbjct: 63 LEDHMGAFTVEPVRGRAAAVLGDRLALSAMSSALALARFSLAERAAYPGFYDQTVALLDA 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + ++ E+ LL +GFGLDL+ C V GV +DL +VSP++G AV R + Sbjct: 123 LAEGTGWLPAYLDWEMALLDQMGFGLDLSGCAVRGVNEDLAFVSPRTGRAVSRQAAGAWV 182 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLLE 238 +++L LP + + T +FL + L R F+ L Sbjct: 183 DRLLPLPEVMLG--GPAHLHGVLEGLTTTGHFLE-HKLAPALGNRPPPEARARFIDVLSR 239 Query: 239 L 239 Sbjct: 240 A 240 >gi|89053018|ref|YP_508469.1| DNA repair protein RecO [Jannaschia sp. CCS1] gi|119361461|sp|Q28V18|RECO_JANSC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|88862567|gb|ABD53444.1| DNA repair protein RecO [Jannaschia sp. CCS1] Length = 244 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 128/243 (52%), Gaps = 7/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ D I+L VR +GE + I+E+ T G HLG VR G S +M P+LQ G + WR+ Sbjct: 1 MDWRADGILLAVRRHGEASAIIELFTADQGCHLGVVRGGASRKMAPLLQVGAQLDATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL+ ++G + E+++ A+++ + L GL S+ L F LPER L+ L+ Sbjct: 61 RLSDHIGSYTVELVKGRAAEVMEDRVALAGLSSVCALLSFSLPERAAYPGLFARTLAVLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ E+ LL +GFGLDL++C TGVTQDL ++SP++G AV R+ + Sbjct: 121 GLGAER-WAEAYLGWEMALLTEMGFGLDLSQCAATGVTQDLAFISPRTGRAVSRAAAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN--IIHCHLLRENFLGKLL 237 A+++L L L E + + + +T +FL + L + R+ + L Sbjct: 180 ADRLLPLSPAL--EGMARGPEDILAGLAVTGHFLATH-LAPSLGDKPLPAARQRLIDALE 236 Query: 238 ELI 240 + Sbjct: 237 RQV 239 >gi|302383088|ref|YP_003818911.1| DNA repair protein RecO [Brevundimonas subvibrioides ATCC 15264] gi|302193716|gb|ADL01288.1| DNA repair protein RecO [Brevundimonas subvibrioides ATCC 15264] Length = 243 Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 134/239 (56%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + ++A +L R++G+ ++++++T +GRH +V G S RM+P LQAG V ++R+ Sbjct: 1 MEFHEEAFVLSARAHGDTGVVVDLLTETHGRHAAYVAGGASRRMKPFLQAGARVIADYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 R + +LG R E + + L L L GL + + + LPEREP + ++ Sbjct: 61 RTSDHLGSARLEPVGEGPSALFDDGLALAGLSAAAAVAQGALPEREPHPGAFLAFEALMS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +IP+V IFV+ E LL+++GFGLDL++C VTG DL+WVSP++G +V S G PY Sbjct: 121 AFQIPAVWPAIFVRFEAGLLEDLGFGLDLSRCAVTGTMDDLVWVSPRTGRSVSASAGAPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 A+K+L LP F+ + + +K LT +FL ++ R + KL E Sbjct: 181 ADKLLKLPPFMLGAQAGLRDGDVKDGLDLTGHFLEQFVFHPQNKPLPTSRTWMIDKLGE 239 >gi|83951646|ref|ZP_00960378.1| DNA repair protein RecO [Roseovarius nubinhibens ISM] gi|83836652|gb|EAP75949.1| DNA repair protein RecO [Roseovarius nubinhibens ISM] Length = 257 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 127/240 (52%), Gaps = 4/240 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D ++L VR +GE ++I++V+T+ +GR+ G VR G S +++P+LQ G + + WR+R Sbjct: 3 EWRDRGLLLAVRPHGETSVIIDVLTQDHGRYAGVVRGGTSRKLRPVLQPGAELDLVWRAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 L ++G F E + + A L L GL ++ + RF L ERE L++ L Sbjct: 63 LDSHMGAFTVEPIRASLAVGLGVRQALAGLNAVTAMLRFALAEREAHGPLFERSLGLLEM 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLPY 179 + ++ E+ LL +GFGLDL+ C V G DL +VSP++G AV R + Sbjct: 123 IGEAELWPLAYLHWEMALLDELGFGLDLSTCAVLGREANDLSFVSPRTGRAVSRKGAGEW 182 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL-QHNIIHCHLLRENFLGKLLE 238 A+++L LP+ L E A+ L F +T +FL+++ + R+ + + Sbjct: 183 ADRLLPLPNCLL-EIAPAPAEDLVQGFAVTGHFLSQHLAGEMQGKPLPDARQRLIDLVAR 241 >gi|254502661|ref|ZP_05114812.1| DNA repair protein RecO [Labrenzia alexandrii DFL-11] gi|222438732|gb|EEE45411.1| DNA repair protein RecO [Labrenzia alexandrii DFL-11] Length = 244 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 91/235 (38%), Positives = 131/235 (55%), Gaps = 5/235 (2%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 ++L R +GE ++ILEVMT GRHLG VR G+S R +P LQ GN + + W++RL+ +LG Sbjct: 1 MVLTTRKHGENDVILEVMTADSGRHLGLVRGGRSKRHRPALQPGNELSLTWKARLSDHLG 60 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 +F+ E + A L++S + L +Q + L R LPER P +Y LN+ L+ Sbjct: 61 QFQIEPHTARAADLMNSGIGLAAVQHLAALVRLLPERHPYPRIYGALNVVLDHLDASDAA 120 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + ++ EL LL+ +G GLDLT C TG T DL +VSP+S AV R G PY +K+L LP Sbjct: 121 AALMIRFELELLQELGAGLDLTSCAATGTTDDLAYVSPRSARAVSREAGRPYHDKLLPLP 180 Query: 188 SFLWKEEQTI----DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 SFL ++ + FQLT +FL++ L I R L + Sbjct: 181 SFLLDGQRQAGTELTWQDVTQGFQLTGFFLDRQ-LGERNITDSGTRTLLTNALEK 234 >gi|154253316|ref|YP_001414140.1| DNA repair protein RecO [Parvibaculum lavamentivorans DS-1] gi|154157266|gb|ABS64483.1| DNA repair protein RecO [Parvibaculum lavamentivorans DS-1] Length = 234 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 1/229 (0%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 +L R++GE ILE+ TR+ GRHLG V G RM+ +LQ GN + +WR RL+++LG Sbjct: 1 MLSARAHGETGAILELFTREQGRHLGLVHGGAGRRMRSVLQPGNKLAAHWRGRLSEHLGT 60 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG 128 ++ E+++ L+ L L GL + + LPERE LYD + L+ + V Sbjct: 61 YQVELVKPLAGLLMDDPLALLGLSAASAICSILPEREAHPALYDGYEVLLDTMRDEDVWP 120 Query: 129 KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS 188 +FV+ EL LL+ +GFGLDLT+C TG DL +VSP+SG AV R G Y E++ LP Sbjct: 121 AVFVRWELGLLQELGFGLDLTQCAATGSRDDLAYVSPRSGSAVSRGAGEIYKERLFRLPG 180 Query: 189 FLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 FL + +A + +LT +FL ++ + H R + K+ Sbjct: 181 FLVGSQAGAAEAADVAEGLRLTGHFLERHLFAAHERHLPDARIRLMEKM 229 >gi|221234572|ref|YP_002517008.1| DNA repair protein RecO [Caulobacter crescentus NA1000] gi|254790515|sp|B8GVD0|RECO_CAUCN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|220963744|gb|ACL95100.1| DNA repair protein recO [Caulobacter crescentus NA1000] Length = 243 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 121/240 (50%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L RS+GE I+E++T G+ V S RM+P LQ G V V +R+ Sbjct: 1 MEWEDEAYVLSARSHGETGAIVELLTEARGKVAAHVAGAASRRMKPFLQPGARVIVRYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 ++ LG E + + L L L GL + + PERE + L + Sbjct: 61 KVEGQLGSATLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +IP + ++V+ E LL+ +GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 121 VLEIPEIWPAVYVRYEAGLLQELGFGLDLSKCAATGAFDDLVYVSPRTGRAVSREAGKPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP F+ + + +K+ +T +FL ++ R L +L E Sbjct: 181 HDKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQFVFGPLNRPLPPARLWLLDRLAEA 240 >gi|254420124|ref|ZP_05033848.1| DNA repair protein RecO [Brevundimonas sp. BAL3] gi|196186301|gb|EDX81277.1| DNA repair protein RecO [Brevundimonas sp. BAL3] Length = 243 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 131/239 (54%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + ++A +L R++G+ +++++T +GR +V G S +M+P LQAG V ++R+ Sbjct: 1 MDFHEEAFVLSARAHGDTGAVVDLLTESHGRRAAYVAGGASRKMRPFLQAGARVVADYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 R + +LG R E + + L +L L GL + + + PEREP ++ + Sbjct: 61 RTSDHLGGARLEPVGEGPSALFDDALALTGLAAAAGVAQGALPEREPHPGVFLAFEALMA 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +P V IFV+ E LL+++GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 121 AFALPDVWPAIFVRFEAGLLEDLGFGLDLSKCAATGTADDLIYVSPRTGRAVSREAGAPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 A+KML LP F+ + + +++ F LT +FL ++ R L +L E Sbjct: 181 ADKMLSLPPFMLGAQAGLVEGDVRAGFDLTGHFLEQFVFHPQNKPLPAARVWMLDRLAE 239 >gi|146278602|ref|YP_001168761.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17025] gi|172046019|sp|A4WVP2|RECO_RHOS5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145556843|gb|ABP71456.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17025] Length = 237 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 5/238 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D+ +L VR +GE I+EV T +GRHLG VR G S R P+LQ G + + W++R Sbjct: 3 EWRDEGALLSVRRHGESAAIIEVFTASHGRHLGVVRGGASRRHAPVLQPGAQLDLTWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNC 120 L ++G F E L + + L L GL +I + LPEREP + L+ ++ Sbjct: 63 LDDHMGAFTVEPLRARTG-IFGDRLALAGLNAICAMLHVVLPEREPHVGLWRESIELMDA 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSP++G AV R+ +A Sbjct: 122 LAAPG-WPAAYLRWEMRLLEEAGFGLDLTRCAVTGSREDLAFVSPRTGRAVGRAAAGDWA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++ LP L + + ++ +T +FL + L R + L Sbjct: 181 DRLFPLPLALLGQGPASGPE-VRQGLAITGHFLARE-LPLAGRPLPEARARLIDLLAR 236 >gi|260576291|ref|ZP_05844283.1| DNA repair protein RecO [Rhodobacter sp. SW2] gi|259021559|gb|EEW24863.1| DNA repair protein RecO [Rhodobacter sp. SW2] Length = 238 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 121/240 (50%), Gaps = 4/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L VR +GE I+EV T +GRH G VR G S R+ P+LQ G + V WR+ Sbjct: 1 MEWRDQGALLSVRPHGESAAIIEVFTAAHGRHAGVVRGGASRRIAPLLQPGAQLDVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S +L L L GL +I + R LPER P LY L+ Sbjct: 61 RLEGHIGAFTVEPVRSRAG-VLGDRLALAGLNAICAMVRVALPERAPHDLLYAATIAVLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL+LL+ +GFGLDL +C VTG DL +VSPK+G AV R + Sbjct: 120 ALETAPDWPARYLRWELLLLEELGFGLDLGRCAVTGSRDDLAYVSPKTGRAVSRDGAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNII-HCHLLRENFLGKLLE 238 A ++L LP L + L + +T +FL + + H R L L Sbjct: 180 AARLLPLPDCLLG-QGPASGADLAAGLAVTGHFLTREMASLRHVQHLPEARARLLELLAR 238 >gi|295690015|ref|YP_003593708.1| DNA repair protein RecO [Caulobacter segnis ATCC 21756] gi|295431918|gb|ADG11090.1| DNA repair protein RecO [Caulobacter segnis ATCC 21756] Length = 243 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L RS+GE I+E++T+ G+ V S RM+P LQ G V +R+ Sbjct: 1 MEWEDEAYVLSARSHGETGAIVELLTQDRGKFAAHVAGAASRRMKPFLQPGARVIARYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 R++ LG E + + L L L GL + + PERE + L + Sbjct: 61 RMSDQLGSASLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ + ++V+ E LL+ +GFGLDL++C TGV DL++VSP++G AV R G PY Sbjct: 121 VLEVSEIWPAVYVRYEAGLLQELGFGLDLSRCAATGVFDDLVYVSPRTGRAVSREAGRPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP F+ + + +K+ +T +FL ++ R L +L E Sbjct: 181 HDKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQFVFGPLNRPLPPARMWLLDRLTEA 240 >gi|254293710|ref|YP_003059733.1| DNA repair protein RecO [Hirschia baltica ATCC 49814] gi|254042241|gb|ACT59036.1| DNA repair protein RecO [Hirschia baltica ATCC 49814] Length = 290 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 123/239 (51%), Gaps = 2/239 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W D AI LG R++GE ++IL+V T GR G V G S + +P+++AGN + V W+++ Sbjct: 3 EWSDTAISLGARTFGETDVILDVFTPSRGRTRGLVYGGISQKKRPMIEAGNTIDVQWKAK 62 Query: 62 LAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 +LG F + + A+ + L L GL ++ + R LPE E LY+ L+ Sbjct: 63 TESSLGHFSVADAINQRAARCMIDPLALAGLSAVTSILRDGLPEGEAKDGLYEATETLLD 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + IF++ EL L+ +G+GL+L CV++G L VSPKSG AV S Y Sbjct: 123 VMGEPDIWPAIFIKWELGFLQQMGYGLNLETCVISGANDGLTHVSPKSGCAVRGSEAEEY 182 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP+FL + + + F+LT YFL + R L +L + Sbjct: 183 IDKLLSLPAFLTDAKAPPSPYDIGAGFKLTGYFLTRRLFADINRDAPEARYLMLERLEK 241 >gi|197105330|ref|YP_002130707.1| recombinational DNA repair protein (RecF pathway) [Phenylobacterium zucineum HLK1] gi|254764651|sp|B4RCU1|RECO_PHEZH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|196478750|gb|ACG78278.1| recombinational DNA repair protein (RecF pathway) [Phenylobacterium zucineum HLK1] Length = 243 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 82/240 (34%), Positives = 123/240 (51%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++DDA +L R++GE I+E++T +GR+ V G S +++P LQ G V +R+ Sbjct: 1 MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 R++ LG E + A L L L GL + + PEREP + Sbjct: 61 RVSDQLGSAAIEPVGEGPAALFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P V +FV+ E LL+++GFGLDL+KC TG+T DL+WVSP++G AV R G PY Sbjct: 121 ALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDDLVWVSPRTGRAVSRQAGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +++L LP FL + + A + + LT +FL + R L +L E Sbjct: 181 KDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAFIFGPLNRPLPPARLWLLDRLSEA 240 >gi|16125811|ref|NP_420375.1| DNA repair protein RecO [Caulobacter crescentus CB15] gi|20139676|sp|Q9A802|RECO_CAUCR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13422953|gb|AAK23543.1| conserved hypothetical protein [Caulobacter crescentus CB15] Length = 250 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 120/239 (50%), Gaps = 1/239 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D+A +L RS+GE I+E++T G+ V S RM+P LQ G V V +R++ Sbjct: 9 EWEDEAYVLSARSHGETGAIVELLTEARGKVAAHVAGAASRRMKPFLQPGARVIVRYRAK 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNC 120 + LG E + + L L L GL + + PERE + L + Sbjct: 69 VEGQLGSATLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIRV 128 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +IP + ++V+ E LL+ +GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 129 LEIPEIWPAVYVRYEAGLLQELGFGLDLSKCAATGAFDDLVYVSPRTGRAVSREAGKPYH 188 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP F+ + + +K+ +T +FL ++ R L +L E Sbjct: 189 DKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQFVFGPLNRPLPPARLWLLDRLAEA 247 >gi|294678824|ref|YP_003579439.1| DNA repair protein RecO [Rhodobacter capsulatus SB 1003] gi|294477644|gb|ADE87032.1| DNA repair protein RecO [Rhodobacter capsulatus SB 1003] Length = 240 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 117/240 (48%), Gaps = 4/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD IL R +GE + I+EV T +GRHLG VR G S +M +L G+ V V WR+ Sbjct: 1 MDWQDSGTILSTRLHGESSAIVEVFTATHGRHLGVVRGGASRKMAAVLMPGSHVAVAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL LG F E L S LS L L GL ++ L F L ER P LY Sbjct: 61 RLEDQLGSFTVEPLASRAG-ALSDRLALMGLNAVCALLSFVLAERAPHPRLYAATEPLFT 119 Query: 120 CHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 ++ E+ LL+++GFGLDL++C VTG DL +VSP++G AV R+ Sbjct: 120 VIGQAAEGWVVDYLIWEMALLEDLGFGLDLSRCAVTGTRDDLAFVSPRTGRAVSRAGAGD 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +A K+L L + + LT +FL ++A +H+ R + + Sbjct: 180 WAPKLLPL-PLCLLGQGPATWTEIGQGLTLTGHFLTRFASEHSRKALPEARNRLIAAIAR 238 >gi|288958668|ref|YP_003449009.1| DNA repair protein RecO [Azospirillum sp. B510] gi|288910976|dbj|BAI72465.1| DNA repair protein RecO [Azospirillum sp. B510] Length = 240 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 117/241 (48%), Gaps = 6/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D I+L R GE + + ++TR +GRH G V G+S R + L+ G LV WR Sbjct: 1 MDWSDQGIVLSARPQGEGSAVATLLTRGHGRHAGMVMGGRSARQRGTLEPGTLVHARWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 RL ++LG F E + + A + L L S L LPERE L+D L + Sbjct: 61 RLPEHLGHFTLEPVRGYAAGFFDDAQALAALTSACALVEAALPEREAHPALFDGLLVLFG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + +V+ E+ LL +GFGLDL +C V+G L +VSP++G AV SVG PY Sbjct: 121 LLDSP-AWAETYVRWEVGLLAELGFGLDLDRCAVSGANDYLAYVSPRTGRAVTASVGEPY 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +++L LP FL A +LT +FL ++ L RE + Sbjct: 180 RDRLLPLPDFLAGRGGGGPAAV-ADGLRLTAHFLERHLL---NGPLPPARERLRERYANA 235 Query: 240 I 240 + Sbjct: 236 V 236 >gi|319898694|ref|YP_004158787.1| DNA repair protein RecO [Bartonella clarridgeiae 73] gi|319402658|emb|CBI76204.1| DNA repair protein RecO [Bartonella clarridgeiae 73] Length = 231 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 100/223 (44%), Positives = 139/223 (62%), Gaps = 1/223 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQRGRYMGIVKGGRSRRMAFLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H ++L+ LY Q + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDLHASRLIVLPEALYSFQLMASHLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC VG P+ Sbjct: 121 FDDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLCYVSPKSGRAVCEEVGRPWK 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 +K+L LP FL K +D + +K LTD+F N L+ Sbjct: 181 DKLLFLPQFLARKTICPVDFNDIKKGLILTDFFFNTLCLERER 223 >gi|296116242|ref|ZP_06834859.1| putative DNA repair protein recO [Gluconacetobacter hansenii ATCC 23769] gi|295977176|gb|EFG83937.1| putative DNA repair protein recO [Gluconacetobacter hansenii ATCC 23769] Length = 265 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 78/246 (31%), Positives = 128/246 (52%), Gaps = 6/246 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE ++I V+T ++G + G VR G + + +P+ QAGNL+ W + Sbjct: 7 MEWEAPALVLSAVPYGESSMIAHVLTGEHGLYHGMVRGGGARQGRPVWQAGNLITARWNA 66 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 RL + LG R E++ + A++L + L L S+ L LPEREP L +++ L L Sbjct: 67 RLPEQLGSLRGELVHASAARVLEYAHPLAMLASLCALADSSLPEREPHLAVFEELTRLLA 126 Query: 120 CHKIPSVIGK-----IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ E++LL ++GFGLDL+ C V+G DL WVSP+SG AV Sbjct: 127 RISLEPAEAERSGMAALIRWEMLLLSDLGFGLDLSCCAVSGQADDLAWVSPRSGRAVSDG 186 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + +++L+LP FL Q + + +LT +FL + A R L Sbjct: 187 HAGQWRDRLLMLPPFLLDPTQDGTPEQWLAGLRLTGHFLARDAFGQRHRPLPAARIRLLD 246 Query: 235 KLLELI 240 + ++ Sbjct: 247 MVGRMV 252 >gi|239947680|ref|ZP_04699433.1| DNA repair protein RecO [Rickettsia endosymbiont of Ixodes scapularis] gi|239921956|gb|EER21980.1| DNA repair protein RecO [Rickettsia endosymbiont of Ixodes scapularis] Length = 234 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKE-SSKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ + + LY S++ L + L ERE + L +L+ Sbjct: 60 RLHEHIGMAKCELIKSYTGYFIINKAKLYAFNSVISLIKELFHEREEHSNFFSFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ LDLTKC V+ VT DL +VSPKSG A+ VG PY Sbjct: 120 NL-SKNFCFRDYINFELALLAETGYKLDLTKCDVSHVTTDLTYVSPKSGRALSYKVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL E I + K A LT+YF N+Y +N R+ F+ +L Sbjct: 179 KDKLLILPRFLLSENSEITLEEKKQAITLTNYFFNRYLFHNNR--QAEARQAFMEYIL 234 >gi|157825871|ref|YP_001493591.1| DNA repair protein RecO [Rickettsia akari str. Hartford] gi|254764658|sp|A8GNV8|RECO_RICAH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157799829|gb|ABV75083.1| DNA repair protein RecO [Rickettsia akari str. Hartford] Length = 237 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 80/238 (33%), Positives = 129/238 (54%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDVGVIISKKPLKENTFIITVCTKNHGLYSGVVKE-SSKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ L+ + LY SI+ L + L ERE + L +L+ Sbjct: 60 RLHEHIGIAKCELIKSYTGYLIINKTKLYAFNSIISLIKELCHEREKHSNFFSFLLNYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ LDLTKC VT VT DL +VSPKS A+ VG PY Sbjct: 120 NL-SKNFCFRDYINFELTLLAKTGYKLDLTKCGVTHVTTDLTYVSPKSARALSYEVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL ++ I + + A LT+YF N+Y +N R+ F+G +L Sbjct: 179 KDKLLILPKFLLSDDSEITLEEKRQALTLTNYFFNRYLFHNNR--QPEARQTFVGYIL 234 >gi|15892735|ref|NP_360449.1| DNA repair protein RecO [Rickettsia conorii str. Malish 7] gi|34581542|ref|ZP_00143022.1| hypothetical protein [Rickettsia sibirica 246] gi|81595557|sp|Q92HF9|RECO_RICCN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|15619911|gb|AAL03350.1| unknown [Rickettsia conorii str. Malish 7] gi|28262927|gb|EAA26431.1| unknown [Rickettsia sibirica 246] Length = 237 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 128/238 (53%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKE-FSKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ +++ LY S++ L + L ERE + + L +L+ Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG PY Sbjct: 120 NL-SKNFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 179 KDKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNNRQV--EARQTFIEYTL 234 >gi|238650314|ref|YP_002916166.1| DNA repair protein RecO [Rickettsia peacockii str. Rustic] gi|259563684|sp|C4K0L7|RECO_RICPU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238624412|gb|ACR47118.1| DNA repair protein RecO [Rickettsia peacockii str. Rustic] Length = 237 Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 128/238 (53%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKE-FSKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ +++ LY S++ L + L ERE + + L +L+ Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFLFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG PY Sbjct: 120 NL-SKNFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 179 KDKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNNRQV--EARQTFIEYTL 234 >gi|157803626|ref|YP_001492175.1| DNA repair protein RecO [Rickettsia canadensis str. McKiel] gi|254790734|sp|A8EYF7|RECO_RICCK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157784889|gb|ABV73390.1| DNA repair protein RecO [Rickettsia canadensis str. McKiel] Length = 241 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 78/238 (32%), Positives = 126/238 (52%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ YG + G V+ S + + I Q GN+V W + Sbjct: 1 MNIKDIGVIVAKKPLKENTFIITVFTKNYGLYSGVVK-ASSKKSKFIYQEGNIVDFLWMA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ +++ LY SI+ L + L ERE + L +L+ Sbjct: 60 RLHEHIGIAKCELIKSYTGYFITNKTKLYAFNSIISLIKELLHEREEYSNFFSFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ EL LL G+ LDL+KC V+ V QDL +VSPKSG A+ VG PY Sbjct: 120 NL-SKKFFFRDYINFELALLDIAGYKLDLSKCAVSNVKQDLYYVSPKSGRALSYEVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ +L Sbjct: 179 KDKLLILPKFLLSDNSKITLEEKRQALTLTNYFFNRYLFHNNR--HAEARQAFMEYIL 234 >gi|330994746|ref|ZP_08318668.1| DNA repair protein recO [Gluconacetobacter sp. SXCC-1] gi|329758007|gb|EGG74529.1| DNA repair protein recO [Gluconacetobacter sp. SXCC-1] Length = 263 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 6/244 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ V+T +YG + G R G + R + Q GNLVR W + Sbjct: 1 MEWEAPALVLSATPYGEGSAIVHVLTGEYGLYHGLARGGSASRGRATWQTGNLVRARWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL + LG E + + A+LL L L L S+ L LPEREP ++ L L Sbjct: 61 RLPEQLGSITAETVHASAARLLDYPLPLAMLASLCALADDCLPEREPHPAIFQGLTSLLA 120 Query: 120 CHKIPSVIGKI-----FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + V+ ELMLL ++GFGLDL C + G +DL WVSP++G AV Sbjct: 121 RISLDPQWAETEAMPEIVRWELMLLSDLGFGLDLGGCALGGSREDLRWVSPRTGRAVSDE 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + +++L LP F+ +Q +L+ +FL + A R Sbjct: 181 KAGAWRDRLLPLPGFILHPQQVATPRDWHDGLRLSGHFLRRDAFGQRHRPVPEARGRLAD 240 Query: 235 KLLE 238 + Sbjct: 241 MIAR 244 >gi|157828681|ref|YP_001494923.1| DNA repair protein RecO [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933400|ref|YP_001650189.1| DNA repair protein RecO [Rickettsia rickettsii str. Iowa] gi|254790735|sp|B0BY57|RECO_RICRO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790736|sp|A8GSP0|RECO_RICRS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157801162|gb|ABV76415.1| DNA repair protein RecO [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908487|gb|ABY72783.1| DNA repair protein [Rickettsia rickettsii str. Iowa] Length = 237 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 127/238 (53%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKE-FSKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ +++ LY S++ L + L ERE + + L +L+ Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKTKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG PY Sbjct: 120 NL-SKHFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 179 KDKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNNRQV--EARQTFIEYTL 234 >gi|229586870|ref|YP_002845371.1| DNA repair protein RecO [Rickettsia africae ESF-5] gi|259563683|sp|C3PNW8|RECO_RICAE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|228021920|gb|ACP53628.1| DNA repair protein RecO [Rickettsia africae ESF-5] Length = 237 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 130/238 (54%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ ++ E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKTLKENTFIITVFTKNHGLYSGVVKE-FSKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ +++ LY S++ L + L ERE + + L +L+ Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ +VG PY Sbjct: 120 NL-SKNFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYAVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 179 KDKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNNRQV--EARQTFIEYTL 234 >gi|312115948|ref|YP_004013544.1| DNA repair protein RecO [Rhodomicrobium vannielii ATCC 17100] gi|311221077|gb|ADP72445.1| DNA repair protein RecO [Rhodomicrobium vannielii ATCC 17100] Length = 241 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 120/240 (50%), Gaps = 3/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I L R +GE ++I ++ TR GR G V+ G+S R++P+LQ GN + V WR+ Sbjct: 1 MRWADDGIFLAGRPHGETSVIADIFTRANGRAKGLVKGGRSRRLRPLLQTGNTLGVEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E+ + A L L G+ ++ L + L ER+P LYD L Sbjct: 61 RLDDQLGVYTVELARATAANALDDPSALAGMTALAALLQVLAERDPHPALYDAAQDCLAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 S F++ EL L +GFGL+L C TG DL++VSPKSG AVCR G PYA Sbjct: 121 ASDASF-PAAFIRFELRFLNELGFGLNLATCAATGRADDLIYVSPKSGQAVCREAGEPYA 179 Query: 181 EKMLVLP--SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP +++ LT +FL + + R+ F L Sbjct: 180 DRLLPLPAFLANAASAAAPSDAEIEAGLLLTGHFLAVHVFAESGKPLPTARDEFARTLRR 239 >gi|67459260|ref|YP_246884.1| DNA repair protein RecO [Rickettsia felis URRWXCal2] gi|75536308|sp|Q4UL54|RECO_RICFE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67004793|gb|AAY61719.1| DNA repair protein RecO [Rickettsia felis URRWXCal2] Length = 237 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDVGVIIAKKPLKENTFIITVFTKNHGLYSGVVKE-SSKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ + + LY S++ L + L ERE + L +L+ Sbjct: 60 RLHEHIGMAKCELIKSYTGYFIINKAKLYAFNSVISLIKELFHEREEHSNFFSFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ LDLTKC VT VT DL +VSPKS A+ VG PY Sbjct: 120 NL-SKNFCFRDYINFELALLAETGYKLDLTKCGVTHVTTDLNYVSPKSARALSYEVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL ++ I + + A LT+YF N+Y +N R+ F+ +L Sbjct: 179 KDKLLILPKFLLSDDSEITLEEKRQASTLTNYFFNRYLFHNNR--QAEARQIFMEYIL 234 >gi|167645704|ref|YP_001683367.1| DNA repair protein RecO [Caulobacter sp. K31] gi|189039651|sp|B0T3I3|RECO_CAUSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167348134|gb|ABZ70869.1| DNA repair protein RecO [Caulobacter sp. K31] Length = 243 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 126/240 (52%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L R +GE I+E++T++ G+ + V S RM+P LQAG V +R+ Sbjct: 1 MEWEDEAFVLSARVHGETGAIVELLTQERGKFVAHVSGAASRRMKPFLQAGAKVIARYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 R++ +G E + + L L L GL + + PERE + L + Sbjct: 61 RMSDQMGAATLEPMGEGPSSLFDEPLALSGLSAAASVAAGALPEREAHPGAFHALEALIA 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 IP++ ++V+ E LL+++GFGLDL+KC TG DL++VSP++G AV R+ G PY Sbjct: 121 ALAIPAIWPAVYVRFEAGLLQDLGFGLDLSKCAATGSLDDLVYVSPRTGRAVSRAAGQPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP F+ + + +K+ +T +FL ++ R L +L E Sbjct: 181 HDKLLPLPPFMLSAQGGLVEGDVKAGLDITGHFLEQFVFHPLNRPLPPARVWLLDRLGEA 240 >gi|157964679|ref|YP_001499503.1| DNA repair protein RecO [Rickettsia massiliae MTU5] gi|157844455|gb|ABV84956.1| DNA repair protein RecO [Rickettsia massiliae MTU5] Length = 274 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 76/238 (31%), Positives = 126/238 (52%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + Q GN+V W++ Sbjct: 38 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVKE-FSRKSKFTYQEGNIVDFLWQA 96 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL ++LG + E+++S+ +++ LY S++ L + L ERE + L +L+ Sbjct: 97 RLHEHLGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFCSFLINYLD 156 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG PY Sbjct: 157 NL-SKNFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKPY 215 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 216 KDKLLMLPRFLLSDNIEITLEEKRQALALTNYFFNRYLFHNNRQV--EARQTFIEYTL 271 >gi|15604714|ref|NP_220921.1| DNA repair protein RecO [Rickettsia prowazekii str. Madrid E] gi|292572163|gb|ADE30078.1| DNA repair protein RecO [Rickettsia prowazekii Rp22] Length = 236 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 126/237 (53%), Gaps = 5/237 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIKE-SSKKNKFIYQEGNIVDFLWKA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ + + LY S++ L + L ERE + L +L+ Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVISLIQELFHEREEHSIFFSFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ LDLTKC V+ VT DL +VSPKS A+ VG PY Sbjct: 120 NL-SKNFCFRDYISFELNLLAETGYKLDLTKCCVSHVTTDLTYVSPKSARALSYKVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+L+LP FL ++ I + K A LT+YF N+Y +N RE F+ + Sbjct: 179 RDKLLILPKFLLAKDSEITLEEKKQALTLTNYFFNRYLFHNNRQV--KAREEFIEYI 233 >gi|294084098|ref|YP_003550856.1| DNA repair protein RecO [Candidatus Puniceispirillum marinum IMCC1322] gi|292663671|gb|ADE38772.1| DNA repair protein RecO [Candidatus Puniceispirillum marinum IMCC1322] Length = 250 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 123/240 (51%), Gaps = 6/240 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W DA+I+ + +GE + ++ V+T + GRH G VR G S +M+ ILQ GN VRV+WR+R Sbjct: 3 EWVADAVIISAKPHGEGSAVVIVLTAENGRHAGLVRGGSSSKMRGILQPGNRVRVSWRAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN- 119 L LG+ + E++ + A +L +L L G+ S L LPERE LYD N + Sbjct: 63 LIDQLGQMQIELINAIPALMLDDALRLAGIASACALLDGTLPEREAQHALYDGTNALFDL 122 Query: 120 -CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 C P + +++ EL LL G+ LDLT+C +G + L +VSPKSG A+ Sbjct: 123 MCLDDPDHRWIEGYIRWELGLLNAAGYQLDLTRCAASGAREKLAYVSPKSGCAIALDQAG 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 Y ++ML LP FL A S LT +FL K + + R +L Sbjct: 183 EYVQRMLTLPVFLGGITNV--ASDHVSGLNLTGHFLEKRVFAAHNQDLPIQRRRLADMVL 240 >gi|51473730|ref|YP_067487.1| DNA repair protein RecO [Rickettsia typhi str. Wilmington] gi|81610783|sp|Q68WI7|RECO_RICTY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|51460042|gb|AAU04005.1| possible RecO-like recombinational DNA repair protein [Rickettsia typhi str. Wilmington] Length = 236 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 125/237 (52%), Gaps = 5/237 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIK-ASSKKNKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ + + LY S+ L + L ERE + L +L+ Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVKFLIQELFHEREEHSIFFAFLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ EL LL G+ +DLTKC V+ VT DL +VSPKS A+ VG PY Sbjct: 120 NL-SKNFCFRDYINFELNLLAETGYKIDLTKCCVSHVTTDLTYVSPKSARALSYKVGKPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+L+LP FL E+ I + K A LT+YF N+Y +N R+ F+ + Sbjct: 179 RDKLLILPKFLLSEDSKITLEEKKQALTLTNYFFNRYLFHNNRQV--EARKEFIEYI 233 >gi|119385562|ref|YP_916617.1| DNA repair protein RecO [Paracoccus denitrificans PD1222] gi|254764650|sp|A1B5X7|RECO_PARDP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119376157|gb|ABL70921.1| DNA repair protein RecO [Paracoccus denitrificans PD1222] Length = 242 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 78/238 (32%), Positives = 117/238 (49%), Gaps = 7/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W +A ++ ++ +GE +IL V++R+ G G V G S + +LQ GN V + WR+ Sbjct: 1 MEWSGEASVMALQRHGESAVILTVLSRETGLIRGLVPGGASAKRAAMLQPGNRVSLRWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL + LG F E + LL S L G+ ++ L F LPER+P L D L+ Sbjct: 61 RLEEQLGTFAVEPARARPG-LLGSGDALAGVNAVTALLTFALPERDPHPRLADATEALLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ E+ LL +GFGLDLT C VTG + L +VSP+SG AV + Sbjct: 120 LMDAGEGWAEAYLHWEMRLLDELGFGLDLTSCAVTGAREGLAYVSPRSGRAVSAQAAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN-KYALQHNIIHCHLLRENFLGKL 236 A ++L LP+ L ++ A LT +FL + A H R + +L Sbjct: 180 APRLLPLPAMLGGRGNGG----IEDALALTGHFLQVRLAEAHAGKPLPPARARLVARL 233 >gi|114799258|ref|YP_759606.1| DNA repair protein RecO [Hyphomonas neptunium ATCC 15444] gi|122942647|sp|Q0C3T7|RECO_HYPNA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114739432|gb|ABI77557.1| DNA repair protein RecO [Hyphomonas neptunium ATCC 15444] Length = 243 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 82/239 (34%), Positives = 120/239 (50%), Gaps = 3/239 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG R +GE +IL+V+TR+ GR G V G S R + +AGN + ++W Sbjct: 1 MNWSDDGIVLGGRRFGEGGLILDVLTREKGRRSGLVYGGASRRKRAQFEAGNTIALSWTG 60 Query: 61 RLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREP-CLELYDMLNIF 117 RL LG F E + ++LL L L +I L R L E + LY+ + Sbjct: 61 RLDDQLGRFDVAEARKDRASRLLDDPAALAALSAITSLLRGGLNEGDAAGSSLYEATTLL 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ P+V ++V+ EL LL +GFGLDL +C V+G L VSP++G AV S Sbjct: 121 LDQLTEPNVWPALYVRWELGLLSALGFGLDLDECAVSGANDGLTHVSPRTGRAVRGSEAE 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 PY +++ LPSFL + + + +LT YF+ RE L ++ Sbjct: 181 PYVDRLFALPSFLIDPRADVLPGDIAAGLRLTGYFIEGRLFGSVHRGLPPERERLLKRI 239 >gi|114327658|ref|YP_744815.1| DNA repair protein recO [Granulibacter bethesdensis CGDNIH1] gi|122327371|sp|Q0BTG0|RECO_GRABC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114315832|gb|ABI61892.1| DNA repair protein recO [Granulibacter bethesdensis CGDNIH1] Length = 250 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+L + YGE + + V + G + G VR G S + I Q GNLV W + Sbjct: 1 MEWTAPCIVLSAQPYGEADCLAAVFSEDQGLYRGLVRGGTSRQRGGIWQPGNLVMARWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RLA LG E++ A + L L L+S+ + LP+RE + L L Sbjct: 61 RLADQLGSLTAELIHPAAALAMDDPLNLAVLRSLCTVAEGALPDREAHPAAFIPLPGLLT 120 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + ++ E +LL+ +G+GLDL +C VTG L +VSP++G AV P Sbjct: 121 RLSLGGGQVVEDAIRWEAILLRELGYGLDLQRCAVTGQVSGLHYVSPRTGRAVSSDAAEP 180 Query: 179 YAEKMLVLPSFLWKEEQT-IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + +++L LP+FL + +T D + + +LT YFL++ R + ++ Sbjct: 181 WLDRLLPLPAFLLHQAETDSDPVAWRDGLRLTGYFLSRDVFGTRHRPLPPARMSLYDRIA 240 Query: 238 EL 239 L Sbjct: 241 AL 242 >gi|218670194|ref|ZP_03519865.1| DNA repair protein RecO [Rhizobium etli GR56] Length = 190 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 86/180 (47%), Positives = 119/180 (66%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKS P+ Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGDRSDLAYVSPKSRPRRQPQRRAPWR 180 >gi|94498593|ref|ZP_01305147.1| Recombinational DNA repair protein (RecF pathway)-like [Sphingomonas sp. SKA58] gi|94421957|gb|EAT07004.1| Recombinational DNA repair protein (RecF pathway)-like [Sphingomonas sp. SKA58] Length = 244 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 6/238 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 AI+ VR++GE I ++T +G G+VR G+S M+P+L GN+V+ ++R+R L Sbjct: 8 AIVCAVRAHGEHGAIARLLTPDHGLMAGYVRGGRSRAMRPVLLPGNVVKADFRARTEDQL 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCHKIPS 125 E+ S A LL+ L + L LPE P LY L L+ + Sbjct: 68 AGLAVELAHSR-APLLAEPLPAAAIDWSCALTAAALPEATPYPALYQALAGLLDAVEAAP 126 Query: 126 V---IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 V+ EL+LL +GFGLDL++C G DL +VSP+S AV R+ L Y ++ Sbjct: 127 AARGWAVALVRYELLLLTELGFGLDLSRCAALGDVNDLAFVSPRSAAAVSRAGALGYEQR 186 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 +L LP FL D + +LT +FL + + R+ + +L + Sbjct: 187 LLPLPPFLVG-GGAGDWADIMDGLRLTGFFLERSVMTERRTDVLAARDRLVERLKRAV 243 >gi|148557387|ref|YP_001264969.1| DNA repair protein RecO [Sphingomonas wittichii RW1] gi|254790737|sp|A5VEW5|RECO_SPHWW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148502577|gb|ABQ70831.1| DNA repair protein RecO [Sphingomonas wittichii RW1] Length = 243 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 122/243 (50%), Gaps = 5/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AII +R++GE I+ +T +G G+VR G+S R++P+L AGNLV +R+ Sbjct: 1 MQVRTPAIICAMRAHGEHGAIVRALTPDHGLLAGYVRGGRSRRLRPVLVAGNLVEAEFRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 R A+ L E+ S L + L + + L L E +P LY+ L+ L Sbjct: 61 RTAEQLPGLTVELSHSRAGLL-AEPLAAAAIDWLSSLTAASLAEGQPHARLYEALDAVLA 119 Query: 120 CHK---IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + V+ ELML+ ++G+ LDL+ C TG DL +VSPKSGGAV R+ G Sbjct: 120 AIEYAPSARGWAAAAVRYELMLMADLGYALDLSACAATGARDDLAYVSPKSGGAVSRAAG 179 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 PYA ++L LP+FL D + +LT +FL + L R+ + ++ Sbjct: 180 EPYAARLLPLPAFLVDPSADSDWSDIVDGMRLTGHFLARDILVDRRADALDARQRLVDRI 239 Query: 237 LEL 239 L Sbjct: 240 GRL 242 >gi|162148788|ref|YP_001603249.1| DNA repair protein recO [Gluconacetobacter diazotrophicus PAl 5] gi|189039658|sp|A9HRQ4|RECO_GLUDA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|161787365|emb|CAP56960.1| putative DNA repair protein recO [Gluconacetobacter diazotrophicus PAl 5] Length = 254 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 6/240 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ ++T G G R G + + + Q GNL+R +WR Sbjct: 1 MEWEAPALVLSASPYGESSAIVHLLTEDLGLVHGLARGGTARANRALWQPGNLIRASWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL LG E++ A+L+S+ L L L S + LPEREP ++ +L F + Sbjct: 61 RLPDQLGNLSGELVHGSAARLMSAPLALAMLASACAVADGTLPEREPHPRIFHLLTRFFS 120 Query: 120 CHK-IPSVIG----KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 P + G ++ E LL ++G+G+DL+ C VTG + +L WVSP++G AV + Sbjct: 121 LLSLDPDMAGWGGMAALLRWEACLLGDLGYGMDLSACAVTGGSAELAWVSPRTGRAVSDA 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + ++L LP E + +LT +FL + A R + Sbjct: 181 AAGEWRPRLLRLPPLFLDESDPGTVQDWRDGLRLTGHFLARDAFGQRHRPLPPARLRLVD 240 >gi|209545462|ref|YP_002277691.1| DNA repair protein RecO [Gluconacetobacter diazotrophicus PAl 5] gi|209533139|gb|ACI53076.1| DNA repair protein RecO [Gluconacetobacter diazotrophicus PAl 5] Length = 254 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 6/240 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ ++T G G R G + + + Q GNL+R +WR Sbjct: 1 MEWEAPALVLSASPYGESSAIVHLLTEDLGLVHGLARGGTARANRALWQPGNLIRASWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL LG E++ A+L+S+ L L L S + LPEREP ++ +L F + Sbjct: 61 RLPDQLGNLSGELVHGSAARLMSAPLALAMLASACAVADGTLPEREPHPRIFHLLTRFFS 120 Query: 120 CHK-IPSVIG----KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 P + G ++ E LL ++G+G+DL+ C VTG + +L WVSP++G AV + Sbjct: 121 LLSLDPDMAGWGGMAALLRWEACLLGDLGYGMDLSACAVTGGSAELAWVSPRTGRAVSDA 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + ++L LP E + +LT +FL + A R + Sbjct: 181 AAGEWRPRLLRLPPLFLNESDPGTVQDWRDGLRLTGHFLARDAFGQRHRPLPPARLRLVD 240 >gi|258543012|ref|YP_003188445.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01] gi|256634090|dbj|BAI00066.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01] gi|256637150|dbj|BAI03119.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-03] gi|256640202|dbj|BAI06164.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-07] gi|256643259|dbj|BAI09214.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-22] gi|256646314|dbj|BAI12262.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-26] gi|256649367|dbj|BAI15308.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-32] gi|256652353|dbj|BAI18287.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655411|dbj|BAI21338.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-12] Length = 263 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 6/239 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A++L GE + + V+T YG G G S + + Q GN+V+ + R A Sbjct: 12 EAPALVLFAGVQGETSARVHVLTEDYGPLRGIAYGGASKAGRALWQPGNVVKTSLHKRSA 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHK 122 + E+L + A+LL + L L +QS+ L LPE +PC L+ L Sbjct: 72 AAPLQISAELLYACAARLLDAPLALSMVQSVCVLADVTLPEADPCPFLFAETVRLLTFLG 131 Query: 123 IPSVIGK-----IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 VI + V+ E+ LL +GFGLDL+ C VTG T++L +VSP++G AV Sbjct: 132 YDPVIAEREGMPHVVRWEMALLATLGFGLDLSACAVTGSTENLHYVSPRTGRAVSEEGAG 191 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 + +++L LPSFL EQT +A + +LT +FL + A + R+ +L Sbjct: 192 EWKDRLLPLPSFLQDTEQTGNAADWLAGLRLTGHFLARDAFGQRHLPLPAARQRLYDRL 250 >gi|294012225|ref|YP_003545685.1| DNA repair protein RecO [Sphingobium japonicum UT26S] gi|292675555|dbj|BAI97073.1| DNA repair protein RecO [Sphingobium japonicum UT26S] Length = 244 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 6/239 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A++ +R +GE I ++T +G G+VR G+S R++P+L GN V+ +R+R + Sbjct: 7 PALVCALRPHGEHGAIARLLTPGHGLLAGYVRGGRSRRLRPVLLPGNAVKAEFRARTEEQ 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIP 124 L E+ S A LL+ L + L LPE P L+ L+ L + Sbjct: 67 LAGLTVELEHSR-APLLAEPLPAAAIDWACALTAVALPEATPYPALHQALDGVLGAVEAA 125 Query: 125 SV---IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 ++ EL+LL +GFGLDL +C TG DL +VSP+S AV R+ + Y + Sbjct: 126 PAARGWATALIRYELLLLAELGFGLDLGRCAATGGNDDLAYVSPRSAAAVSRAGAVGYED 185 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++L LP+FL E + ++ +LT +FL + L + RE + +L + Sbjct: 186 RLLPLPAFLL-EGGAGEWPAILDGLRLTGFFLERSVLTDWRVDVLAARERLVDRLKRAV 243 >gi|329115619|ref|ZP_08244341.1| DNA repair protein RecO [Acetobacter pomorum DM001] gi|326695047|gb|EGE46766.1| DNA repair protein RecO [Acetobacter pomorum DM001] Length = 263 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 6/239 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A++L GE + + V+T YG G G S + + Q GN+V+ ++ R A Sbjct: 12 EAPALVLFAGVQGETSARIHVLTEDYGPLRGIAYGGASKAGRALWQPGNVVKTSFHKRSA 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHK 122 + E+L + A+LL + L L +QS+ L LPE +PC L+ L Sbjct: 72 AAPLQISGELLYACAARLLDAPLALGMVQSVCVLADVTLPEADPCPFLFAETVRLLTFLG 131 Query: 123 IPSVIGK-----IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 V+ + V+ E+ LL +GFGLDL+ C VTG T++L +VSP++G AV Sbjct: 132 YDPVVAEREGMPHVVRWEMALLVTLGFGLDLSACAVTGSTENLHYVSPRTGRAVSEEGAG 191 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 + +++L LPSFL EQT A + +LT +FL + A + R+ +L Sbjct: 192 EWKDRLLPLPSFLRDTEQTGHAADWLAGLRLTGHFLARDAFGQRHLPLPAARQRLYDRL 250 >gi|310815097|ref|YP_003963061.1| DNA repair protein RecO [Ketogulonicigenium vulgare Y25] gi|308753832|gb|ADO41761.1| DNA repair protein RecO [Ketogulonicigenium vulgare Y25] Length = 241 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 5/216 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 WQD+ I+L +GE +I +V T++ G+ G VR G RMQP+L GN + + WR+R Sbjct: 3 DWQDEGILLTTHRHGEAGVIAQVFTQERGKISGLVRGGAGSRMQPVLIPGNQLSLRWRAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L +LG + E++ S L+ L G L +PER P Y L+ Sbjct: 63 LDDHLGSLQPELIRSRAGFLMQDRLSLAAGAAVTALLAATMPERVPHTAFYAQSTALLDL 122 Query: 121 ---HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 S+ ++Q E++LL+ GFGLDLT C VTG DL +VSPKSG AV +S Sbjct: 123 VGVEDWQSLWPLAYLQWEMVLLREGGFGLDLTTCAVTGAADDLCYVSPKSGRAVSKSGAG 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL 213 +AE++L LP+ + E D + A T++FL Sbjct: 183 AWAERLLPLPAVMRGEGDA-DTSDILQALATTEWFL 217 >gi|304321235|ref|YP_003854878.1| DNA repair protein RecO [Parvularcula bermudensis HTCC2503] gi|303300137|gb|ADM09736.1| DNA repair protein RecO [Parvularcula bermudensis HTCC2503] Length = 243 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 120/242 (49%), Gaps = 6/242 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W D ++ GE ++++ + TR G G V GQ R P+LQ GNLV +W SR Sbjct: 3 EWTDRGFVIKTIPRGENHLVVTLFTRCRGAVTGLVHGGQGTRKAPLLQRGNLVSADWSSR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNC 120 A G +R E+ E+ A+ L S L L LQS+ L LPE L+D +F + Sbjct: 63 QADGYGTYRLELAEAIAARALDSRLSLLALQSVTDLLCEILPEGVAYEGLFDATEVFFSA 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT----QDLLWVSPKSGGAVCRSVG 176 +++ + V+ EL LL +G+GL L +C TG T DL++VSPKSGGAV G Sbjct: 123 LGEKAIMATLLVKWELGLLAALGYGLSLERCAATGRTLEDGADLVFVSPKSGGAVTAEAG 182 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 PYA+++L LP FL + + + +LT FL++ L R + +L Sbjct: 183 APYADRLLPLPPFLIDRGE-PTWPDIAAGLRLTGTFLDERLLAPVGKSLPEARGQLIRRL 241 Query: 237 LE 238 Sbjct: 242 TR 243 >gi|68171672|ref|ZP_00545033.1| recO-related protein [Ehrlichia chaffeensis str. Sapulpa] gi|88658325|ref|YP_507349.1| DNA repair protein RecO [Ehrlichia chaffeensis str. Arkansas] gi|123493398|sp|Q2GGT4|RECO_EHRCR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67998907|gb|EAM85598.1| recO-related protein [Ehrlichia chaffeensis str. Sapulpa] gi|88599782|gb|ABD45251.1| putative DNA repair protein RecO [Ehrlichia chaffeensis str. Arkansas] Length = 244 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 9/245 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R YG+ II+ + T+++G G + + + LQ G+ V V W S Sbjct: 1 MRWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLAKYSKKATHR--LQIGDYVNVTWSS 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ-SIVPLFRFLPEREPCLELYDMLNIFLN 119 RL NLG F++E+++S + +L + S V L + LPE E +Y+ L+IF+N Sbjct: 59 RLISNLGCFKYELIKSTLYHYIQDNLKTMCIAFSTVILDQVLPENEENYIIYNCLDIFIN 118 Query: 120 CHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + KI ++++EL LL +GFGLDL++C V ++L ++SPK+G AV ++VGLP Sbjct: 119 SIQFQDINWKIKYLRLELTLLSELGFGLDLSRCAVNNTNENLTFISPKTGKAVSKTVGLP 178 Query: 179 YAEKMLVLPSFLWKEEQTIDA----DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 Y++ +L LP L+ + K + + YF K+ L RE + Sbjct: 179 YSKSLLPLPQLLYDVYNNYEYKYSKTDFKLSLNVLGYFFKKHFLTEKNTILIKYREEII- 237 Query: 235 KLLEL 239 KL++L Sbjct: 238 KLIDL 242 >gi|91205107|ref|YP_537462.1| DNA repair protein RecO [Rickettsia bellii RML369-C] gi|157827560|ref|YP_001496624.1| DNA repair protein RecO [Rickettsia bellii OSU 85-389] gi|122425954|sp|Q1RJU1|RECO_RICBR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790733|sp|A8GXI7|RECO_RICB8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91068651|gb|ABE04373.1| DNA repair protein RecO [Rickettsia bellii RML369-C] gi|157802864|gb|ABV79587.1| DNA repair protein RecO [Rickettsia bellii OSU 85-389] Length = 241 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 75/239 (31%), Positives = 123/239 (51%), Gaps = 5/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G + S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVAKE-SSKKSKFIYQEGNVVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 RL +++G + E+++S+ + + LY S++ L + L ERE + +L +L+ Sbjct: 60 RLHEHIGIAKCELVKSYIGHFIINKAKLYAFNSVISLIKELFHEREEHYNFFSLLINYLD 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ EL LL +G+ LD TKC V+ TQDL ++SPKSG AV VG PY Sbjct: 120 NL-AKNFCFHDYINFELALLAEMGYELDFTKCGVSNTTQDLAYLSPKSGRAVSYEVGAPY 178 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP FL I + + A LT YF N+Y +R+ F+ +LE Sbjct: 179 KDKLLPLPKFLLSGNDKITLEEKRQALNLTSYFFNRYLFH--NHRQPEIRQVFVEYILE 235 >gi|83593184|ref|YP_426936.1| DNA repair protein RecO [Rhodospirillum rubrum ATCC 11170] gi|119361481|sp|Q2RT96|RECO_RHORT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83576098|gb|ABC22649.1| Recombination protein O, RecO [Rhodospirillum rubrum ATCC 11170] Length = 252 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 7/244 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W D I+L R +GE +I+ +++ +GRH G VR G+ R++ LQ G+LV+ W++R Sbjct: 3 EWSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFL-- 118 L +LG E+L LL L L + L LPER P ++YD L Sbjct: 63 LEDHLGSLVVELLAGVAGGLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALLDA 122 Query: 119 ---NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 P V FV+ E+ LL +GFGLDL+ C V+G DL +VSP+SG AV R Sbjct: 123 LAEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAVSGECGDLAYVSPRSGRAVGREA 182 Query: 176 GLPYAEKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 G P+ ++L LP+FL + +A ++ +L+ YFL + L R+ F+ Sbjct: 183 GAPWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRFVE 242 Query: 235 KLLE 238 +L Sbjct: 243 RLRR 246 >gi|58697108|ref|ZP_00372549.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila simulans] gi|58698226|ref|ZP_00373146.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila ananassae] gi|225630040|ref|YP_002726831.1| DNA repair protein RecO [Wolbachia sp. wRi] gi|254790743|sp|C0R5J8|RECO_WOLWR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|58535253|gb|EAL59332.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila ananassae] gi|58536603|gb|EAL59934.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila simulans] gi|225592021|gb|ACN95040.1| DNA repair protein RecO [Wolbachia sp. wRi] Length = 240 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 126/243 (51%), Gaps = 13/243 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+KN+IL + T+ +G+ G + N +++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG F+ E++ES L + S + + LPE EPC LYD F Sbjct: 57 SAKLPENLGFFKCELIESSFHHFFQDRLKSITIVSFSSILEKVLPESEPCAVLYDNFRYF 116 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + G Sbjct: 117 IDVIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKAG 176 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 YA+K+L P L + + + ++T YFLNKY + LR Sbjct: 177 DYYADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKYLFLQLNVKFPELRNL 236 Query: 232 FLG 234 L Sbjct: 237 MLS 239 >gi|148284965|ref|YP_001249055.1| DNA repair protein RecO [Orientia tsutsugamushi str. Boryong] gi|254764648|sp|A5CF17|RECO_ORITB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146740404|emb|CAM80867.1| DNA repair protein [Orientia tsutsugamushi str. Boryong] Length = 241 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 82/239 (34%), Positives = 131/239 (54%), Gaps = 4/239 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++D AIIL R+ E I+ V+T+ YG + G +++ S + I Q GN+V W + Sbjct: 1 MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 RL ++LG E+++S+ ++S+ L+ S++ L ERE L++ L Sbjct: 61 RLDKHLGTINCELVKSYSYLIMSNKRNLFYTHSLIELTLMSFKERELHANLFEKWLGNLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ K ++ EL++LK G+ L L +C VT TQ+L++VSPKSG A+ +VG PY Sbjct: 121 SINVGNINIKNYINFELLILKEAGYQLTLDRCGVTNCTQNLIYVSPKSGQAISAAVGEPY 180 Query: 180 AEKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 K+L+LP FL + D +++AF LT YF NKY L + RE L +L Sbjct: 181 KHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYVLIKK--KLPIARELLLKSIL 237 >gi|99035892|ref|ZP_01314943.1| hypothetical protein Wendoof_01000221 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 240 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 127/243 (52%), Gaps = 13/243 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+KN+IL + T+ +G+ G + N +++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG F+ E++ES L + S + + LPE EPC LYD F Sbjct: 57 SAKLPENLGFFKCELIESPFHHFFQDRLKSITIVSFSSILEKVLPESEPCAMLYDNFRYF 116 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 117 IDVIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVG 176 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 YA+K+L P L + + + ++T YFLNKY + LR Sbjct: 177 DYYADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKYLFLQLNVKFPELRNL 236 Query: 232 FLG 234 L Sbjct: 237 MLS 239 >gi|58418862|gb|AAW70877.1| Recombinational DNA repair protein RecO [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 245 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 13/243 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+K++IL + + +G+ G R N S++ Q NL+ W Sbjct: 6 MRWKDEGIIIAAKKYGDKSLILSLFMKNHGKCRGLTRLTNDSSYK----FQVSNLLHAEW 61 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG F+ E++ES SL + S + + LPE EPC LYD F Sbjct: 62 SAKLPENLGFFKCELIESPFHHFFQDSLKSITIVSFSSILEKVLPESEPCAVLYDNFQYF 121 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K S ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 122 IDVIKHGSEPWQGHYLNLELLLLAQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVG 181 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 YA+K+L P L + + + ++T YFLNKY + R Sbjct: 182 DYYADKLLPFPQMLHDVYNNNLQNSYSYQEFQLGLKVTGYFLNKYLFSQLNMRFPESRNL 241 Query: 232 FLG 234 L Sbjct: 242 ILS 244 >gi|161899045|ref|YP_198119.2| DNA repair protein RecO [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 240 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 13/243 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+K++IL + + +G+ G R N S++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKSLILSLFMKNHGKCRGLTRLTNDSSYK----FQVSNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG F+ E++ES SL + S + + LPE EPC LYD F Sbjct: 57 SAKLPENLGFFKCELIESPFHHFFQDSLKSITIVSFSSILEKVLPESEPCAVLYDNFQYF 116 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K S ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 117 IDVIKHGSEPWQGHYLNLELLLLAQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVG 176 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 YA+K+L P L + + + ++T YFLNKY + R Sbjct: 177 DYYADKLLPFPQMLHDVYNNNLQNSYSYQEFQLGLKVTGYFLNKYLFSQLNMRFPESRNL 236 Query: 232 FLG 234 L Sbjct: 237 ILS 239 >gi|296535950|ref|ZP_06898099.1| recombination protein O [Roseomonas cervicalis ATCC 49957] gi|296263723|gb|EFH10199.1| recombination protein O [Roseomonas cervicalis ATCC 49957] Length = 250 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 117/238 (49%), Gaps = 2/238 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQ AI+L R +GE ++ V+T +GRH G V G S + Q GNLV V WR Sbjct: 1 MEWQAPAIVLEARPHGEGAAVVSVLTEDHGRHAGLVHGGASRAQSGLWQPGNLVEVRWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RLA+ LG E++ A L L L LQS L LPERE ++ L + Sbjct: 61 RLAEQLGSLSGEMVHPTAALALDEPLTLALLQSACALATDALPEREAQPRIFSGLLALMA 120 Query: 120 CHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + +++ E +LL+ +G+GLDL+ C VTG ++L VSP+SG AV P Sbjct: 121 QLGRGAPALLADYIRWEALLLEGLGYGLDLSVCAVTGAAENLTHVSPRSGRAVSAEAAAP 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 Y +++L LP FL + D +LT +FL + A RE + ++ Sbjct: 181 YRDRLLPLPLFLLGGQDERDPAEWLKGLRLTGHFLERDAFGARHRAVPPARERLVSRI 238 >gi|189184083|ref|YP_001937868.1| DNA repair protein RecO [Orientia tsutsugamushi str. Ikeda] gi|254764649|sp|B3CTD7|RECO_ORITI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189180854|dbj|BAG40634.1| DNA repair protein RecO [Orientia tsutsugamushi str. Ikeda] Length = 241 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 4/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++D AIIL R+ E I+ V+T+ YG + G +++ S + I Q GN+V W + Sbjct: 1 MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 RL ++LG E+++S+ ++S+ L S++ L ERE L++ L Sbjct: 61 RLDEHLGTINCELVKSYSYLIMSNKRNLLYTHSLIELTLMSFKERELHANLFEKWLENLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ K ++ EL++LK G+ L+L +C VT TQ+L++VSPKSG A+ +VG PY Sbjct: 121 SINTGNINVKNYINFELLILKEAGYRLNLDRCGVTNCTQNLIYVSPKSGQAISATVGEPY 180 Query: 180 AEKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 K+L+LP FL + D +++AF LT YF NKY L + RE L +LE Sbjct: 181 KHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYILIKK--KLPITRELLLKSILE 238 >gi|225631179|ref|ZP_03787882.1| DNA repair protein RecO [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591127|gb|EEH12306.1| DNA repair protein RecO [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 240 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 126/243 (51%), Gaps = 13/243 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+KN+IL + T+ +G+ G + N +++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG F E++ES L + S + + LPE EPC LYD F Sbjct: 57 SAKLPENLGFFECELIESPFHHFFQDRLKSITIVSFSSILEKVLPESEPCAMLYDNFRYF 116 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 117 IDVIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVG 176 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 YA+K+L P L + + + ++T YFLNKY + LR Sbjct: 177 DYYADKLLPFPQMLHDVYNNTLQNSYSFQEFQLGLKVTGYFLNKYLFLQLNVKFPELRNL 236 Query: 232 FLG 234 L Sbjct: 237 MLS 239 >gi|307294438|ref|ZP_07574282.1| DNA repair protein RecO [Sphingobium chlorophenolicum L-1] gi|306880589|gb|EFN11806.1| DNA repair protein RecO [Sphingobium chlorophenolicum L-1] Length = 244 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 6/239 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A++ +R +GE I ++T +G G+VR G+S RM+P+L N V+ +R+R + Sbjct: 7 PALVCALRPHGEHGAIARLLTPDHGLLAGYVRGGRSRRMRPVLLPANAVKAEFRARTEEQ 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHK-- 122 L E+ S A LL+ L + L LPE P LY L+ L + Sbjct: 67 LAGLTVELDHSR-APLLAEPLPAAAIDWACALTAVALPEGTPYPALYQALDGVLGAVEAA 125 Query: 123 -IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 ++ EL++L +GFGLDLT+C TG DL ++SP+S AV R+ Y + Sbjct: 126 PAARGWAAALIRYELLMLAELGFGLDLTRCAATGGRDDLAYISPRSAAAVSRAGAAGYED 185 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++L LP+FL E D ++ +LT +FL + L + RE + +L ++ Sbjct: 186 RLLPLPAFLL-EGGAGDWPAILDGLRLTGFFLERSVLTDWRVDVLAARERLVDRLKRVV 243 >gi|42520114|ref|NP_966029.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652824|sp|Q73IE9|RECO_WOLPM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|42409851|gb|AAS13963.1| recO-related protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 240 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 127/243 (52%), Gaps = 13/243 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ II+ + YG+KN+IL + T+ +G+ G + N +++ Q NL+ W Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG + E++ES L + S + + LPE EPC LYD L F Sbjct: 57 SAKLPENLGFLKCELIESPFHHFFQDRLKSITIVSFSSILEKVLPESEPCAMLYDNLRYF 116 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 117 IDVIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVG 176 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 YA+K+L P L + + + ++T YFLNKY + LR Sbjct: 177 DYYADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKYLFLQLNVKFPELRNL 236 Query: 232 FLG 234 L Sbjct: 237 MLS 239 >gi|218660067|ref|ZP_03515997.1| DNA repair protein RecO [Rhizobium etli IE4771] Length = 174 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 77/156 (49%), Positives = 110/156 (70%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 19 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 78 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+++ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 79 RLDEHLGEFRVEPVTLRAARMMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 138 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 P+ G++FV+ EL +L ++GFGLDL +C TG Sbjct: 139 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGA 174 >gi|190570798|ref|YP_001975156.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019675|ref|ZP_03335480.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|254790742|sp|B3CPG9|RECO_WOLPP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190357070|emb|CAQ54467.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994716|gb|EEB55359.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 242 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 13/238 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNW 58 M W+D+ +I+ V+ YG+KN+IL + T+ +G+ G R N +++ Q NL+ W Sbjct: 1 MRWKDEGVIIAVKKYGDKNLILSLFTKNHGKCRGLTRLTNNSNYK----FQISNLLHAEW 56 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++L +NLG + E++ES L + S + + LPE E C++LYD F Sbjct: 57 SAKLPENLGFLKCELIESPFHHFFQDRLKSIAIVSFSSILEKVLPESESCIKLYDNFRHF 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K S ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 117 IDVIKHNSQFWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVG 176 Query: 177 LPYAEKMLVLPSFLWKE-----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR 229 YA+K+L P L + + + ++T YFLNKY LR Sbjct: 177 DCYADKLLPFPQMLHDVYNNNLQNSYSYQEFRLGLKITGYFLNKYLFLQLNAKFPELR 234 >gi|56416838|ref|YP_153912.1| DNA repair protein RecO [Anaplasma marginale str. St. Maries] gi|81599148|sp|Q5PAM3|RECO_ANAMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56388070|gb|AAV86657.1| hypothetical protein AM680 [Anaplasma marginale str. St. Maries] Length = 238 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 121/228 (53%), Gaps = 10/228 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTRF---TKKRP-LQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 +L NLG F EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGCAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 +K+L LP L E + AD + ++ +FL ++ LQ + Sbjct: 177 RDKLLPLPKVLRSISCGVETECCSADEFALSLRILGFFLRRHLLQESH 224 >gi|269958745|ref|YP_003328532.1| DNA repair protein RecO [Anaplasma centrale str. Israel] gi|269848574|gb|ACZ49218.1| DNA repair protein RecO [Anaplasma centrale str. Israel] Length = 238 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 123/228 (53%), Gaps = 10/228 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTRF---TKKRP-LQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 +L NLG F +EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTYEVITSAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGCAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 +K+L LP L E + AD + ++ +FL+++ LQ + Sbjct: 177 RDKLLPLPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQESH 224 >gi|222475203|ref|YP_002563619.1| DNA repair protein RecO [Anaplasma marginale str. Florida] gi|254790506|sp|B9KIQ1|RECO_ANAMF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222419340|gb|ACM49363.1| DNA repair protein RecO [Anaplasma marginale str. Florida] Length = 238 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 121/228 (53%), Gaps = 10/228 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTR---LTKKRP-LQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 +L NLG F EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 K+L LP L E + AD + ++ +FL+++ LQ + Sbjct: 177 RNKLLPLPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQESH 224 >gi|88607051|ref|YP_505316.1| DNA repair protein RecO [Anaplasma phagocytophilum HZ] gi|123494993|sp|Q2GJY5|RECO_ANAPZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|88598114|gb|ABD43584.1| DNA repair protein RecO [Anaplasma phagocytophilum HZ] Length = 245 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 10/228 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD +I+ + YG+ IL V TR +G +R + + LQ G+ V V WR+ Sbjct: 1 MQWQDHGMIVSMTPYGDTRSILSVFTRNHGICNAMIRLNKKKQS---LQIGDRVCVTWRA 57 Query: 61 RLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFL 118 RLA NLG F E++ S L L S+ +++ +P + LYD L F Sbjct: 58 RLANNLGYFNSCEIISSAFYAYFQDHSKLLCLSSVTSTIYKSVPTNDAHPILYDYLIEFA 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + ++++EL +L +GF LDL++C V +LL++SPK+G A+ G+ Sbjct: 118 EAAECGGHWYNEYLKLELEILSQLGFALDLSRCAVYHCEDNLLYISPKTGRAISERAGVS 177 Query: 179 YAEKMLVLPSFLWKEEQTIDAD-----SLKSAFQLTDYFLNKYALQHN 221 Y + LP L + Q+ YFL+++ L + Sbjct: 178 YRHLLFPLPQILRDLHNGTHTEQCSRKEFLLCLQILGYFLHRHLLSDD 225 >gi|329890071|ref|ZP_08268414.1| recombinational DNA repair protein RecF pathway [Brevundimonas diminuta ATCC 11568] gi|328845372|gb|EGF94936.1| recombinational DNA repair protein RecF pathway [Brevundimonas diminuta ATCC 11568] Length = 200 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 1/197 (0%) Query: 44 MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LP 102 M+P LQ G V + RSR + LG R E + A L L L GL + + + LP Sbjct: 1 MRPFLQPGARVVADLRSRTSDQLGSARLEPVGEGPAALFDDPLALTGLSAAAAVAQGALP 60 Query: 103 EREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW 162 EREP + + +P V IFV+ E LL+++GFGLDL++C TG DL+W Sbjct: 61 EREPHPGAFYAFEALMGAFAVPEVWPAIFVRFEAGLLEDLGFGLDLSRCASTGSMDDLVW 120 Query: 163 VSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 VSP++G AV R G PYA+K+L LP F+ + + +K+ +LT +FL ++ Sbjct: 121 VSPRTGRAVSREAGAPYADKLLALPPFMLGAQAGLGEGDVKAGLELTGHFLEQFVFHALN 180 Query: 223 IHCHLLRENFLGKLLEL 239 R + KL E Sbjct: 181 RPLPPARVWMIDKLGEA 197 >gi|58617232|ref|YP_196431.1| DNA repair protein RecO [Ehrlichia ruminantium str. Gardel] gi|58416844|emb|CAI27957.1| Putative DNA repair protein recO [Ehrlichia ruminantium str. Gardel] Length = 244 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 130/242 (53%), Gaps = 8/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R Y + +I+ V+T+++G G + + LQ G+ + V W + Sbjct: 1 MRWQDQGIVIAIRKYCDNQVIISVLTKKHGLKKGLTKY--YKKTINRLQIGDYINVTWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLN 119 RL NLG F++E+++S ++++L L L + LPE E +Y +IF+N Sbjct: 59 RLISNLGYFKYELIKSTIYYYMTNNLQTLCLAFFTFILDQVLPENEENYVIYHYFDIFIN 118 Query: 120 CHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + ++ +I ++++E++LL +GFGLDL+KC V + L+++SPK+G A+ +++GLP Sbjct: 119 SIQSKNINWQIKYLKLEMVLLSELGFGLDLSKCAVNQTQESLIFISPKTGKAISKNIGLP 178 Query: 179 YAEKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 Y +K+L LP L+ + K + + YF K+ L I RE + Sbjct: 179 YKKKLLPLPQLLYNIYNNYTYEFSNTEFKLSLNVLGYFFKKHFLTDKNITFLKYREEIIK 238 Query: 235 KL 236 L Sbjct: 239 LL 240 >gi|255003183|ref|ZP_05278147.1| DNA repair protein RecO [Anaplasma marginale str. Puerto Rico] gi|255004314|ref|ZP_05279115.1| DNA repair protein RecO [Anaplasma marginale str. Virginia] Length = 233 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 117/222 (52%), Gaps = 10/222 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR++L NL Sbjct: 2 GVVMGTRPYGDEHLLLSILTRNRGLRRGLTR---LTKKRP-LQIGDLIDATWRAKLPTNL 57 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNCHKIPS 125 G F EV+ S + L L SI + LPE EP LYD F + + Sbjct: 58 GHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAAAAEAEA 117 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y K+L Sbjct: 118 PWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAYRNKLLP 177 Query: 186 LPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 LP L E + AD + ++ +FL+++ LQ + Sbjct: 178 LPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQESH 219 >gi|332188696|ref|ZP_08390410.1| DNA repair protein RecO [Sphingomonas sp. S17] gi|332011260|gb|EGI53351.1| DNA repair protein RecO [Sphingomonas sp. S17] Length = 243 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 82/244 (33%), Positives = 115/244 (47%), Gaps = 6/244 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ AIIL VR +GE I+ +TR G G+VR G+S ++P+LQ GN + WR+ Sbjct: 1 MHRVAPAIILSVRPHGEHGAIVRALTRDDGVQPGYVRGGRSRALRPVLQPGNAIIGEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 R A+ L E S L L G++ + L LPE +P LYD L+ L Sbjct: 61 RTAEQLPALTLEPGHSRAG-LHGEPLAAAGIEWLCALTAAALPEEQPYPILYDALDAVLT 119 Query: 120 CHK---IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + V+ EL+LL +GFGLDL +C VTG T DL +VSPKSG AV Sbjct: 120 AIESAPSARGWAGALVRYELLLLGQLGFGLDLERCTVTGGTDDLAFVSPKSGAAVSVGAA 179 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 Y ++ LP FL E D + +A ++T +FL + L R + Sbjct: 180 FGYEARLFSLPLFLR-EGGAADWPDIFAAGRITAHFLARDILAGLRHDPMPARARLFDRF 238 Query: 237 LELI 240 + Sbjct: 239 KRAV 242 >gi|57239220|ref|YP_180356.1| DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|58579178|ref|YP_197390.1| DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|57161299|emb|CAH58220.1| putative DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|58417804|emb|CAI27008.1| Putative DNA repair protein recO [Ehrlichia ruminantium str. Welgevonden] Length = 244 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 129/242 (53%), Gaps = 8/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R Y + +I+ V+T+++G G + + LQ G+ + V W + Sbjct: 1 MRWQDQGIVIAIRKYCDNQVIISVLTKKHGLKKGLTKY--YKKTINRLQIGDYINVTWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLN 119 RL NLG F++E+++S ++++L L L + LPE E +Y +IF+N Sbjct: 59 RLISNLGYFKYELIKSTIYYYITNNLQTLCLAFFTFILDQVLPENEENYVIYHYFDIFIN 118 Query: 120 CHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + ++ +I ++++E++LL +GFGLDL+KC V + L+++SPK+G A+ ++GLP Sbjct: 119 SIQSKNINWQIKYLKLEMVLLSELGFGLDLSKCAVNQTQESLIFISPKTGKAISENIGLP 178 Query: 179 YAEKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 Y +K+L LP L+ + K + + YF K+ L I RE + Sbjct: 179 YKKKLLPLPQLLYNIYNDYTYEFSNTEFKLSLNVLGYFFKKHFLTDKNITFLKYREEIIK 238 Query: 235 KL 236 L Sbjct: 239 LL 240 >gi|88608141|ref|YP_506346.1| putative DNA repair protein RecO [Neorickettsia sennetsu str. Miyayama] gi|88600310|gb|ABD45778.1| putative DNA repair protein RecO [Neorickettsia sennetsu str. Miyayama] Length = 237 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 8/206 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L + E + + T+ YG G S + + GN+V W Sbjct: 1 MQWENEGIVLSNKGLVENKAVTTLFTKDYGLKRGL----CSRKT--TIDVGNVVYCRWSG 54 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLN 119 RL LG FR EV E L + L L +++ L + LPE EP E+Y L Sbjct: 55 RLEVQLGYFRVEVKEIISPFLFTDYKKLKLLNAVLSILLKVLPENEPQKEIYKTFIQLLQ 114 Query: 120 CHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K ++ + +++++L +L+ +GF LDL++C VTG T+DL ++SPK+G AV ++VG Sbjct: 115 AFKSNTLCYYRQYIEMDLSILQYLGFQLDLSRCAVTGETKDLFYISPKTGRAVTKAVGEA 174 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKS 204 Y +K+L+LP L+K + + + Sbjct: 175 YKDKLLLLPPSLYKIANGLSIEEISQ 200 >gi|254995034|ref|ZP_05277224.1| DNA repair protein RecO [Anaplasma marginale str. Mississippi] Length = 233 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 10/222 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +++G R YG+++++L ++TR G G R + +P LQ G+L+ WR++L NL Sbjct: 2 GVVMGTRPYGDEHLLLSILTRNRGLRRGLTR---LTKKRP-LQIGDLIDATWRAKLPTNL 57 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNCHKIPS 125 G F +EV+ S + L L SI + LPE EP LYD F + + Sbjct: 58 GHFTYEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAAAAEAEA 117 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y K+L Sbjct: 118 PWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAYRNKLLP 177 Query: 186 LPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 LP L E + AD + ++ +FL+++ LQ + Sbjct: 178 LPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQESH 219 >gi|254796817|ref|YP_003081654.1| DNA repair protein RecO [Neorickettsia risticii str. Illinois] gi|254590066|gb|ACT69428.1| DNA repair protein RecO [Neorickettsia risticii str. Illinois] Length = 238 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 8/203 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L + E + + T+ YG G S + + GN+V W + Sbjct: 1 MQWENEGIVLSNKGLVENKAVTTLFTKDYGLKRGL----CSRK--ATIDVGNVVYCKWSA 54 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLN 119 RL LG FR EV E L + L L +++ L + LPE EP E+Y + L Sbjct: 55 RLESQLGYFRVEVKEIISPFLFTDYKKLKLLNAVLSILLKVLPENEPQKEIYKIFIQLLQ 114 Query: 120 CHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K + + +++++L +L+++GF LDL++C VTG T++L ++SPK+G AV ++VG Sbjct: 115 AFKSETSCYYRQYIEMDLSILRHLGFQLDLSRCTVTGETKNLFYISPKTGRAVTKAVGEA 174 Query: 179 YAEKMLVLPSFLWKEEQTIDADS 201 Y +K+L+LP L+K + + Sbjct: 175 YKDKLLLLPPSLYKIANGLSLED 197 >gi|306837524|ref|ZP_07470399.1| DNA repair protein RecO [Brucella sp. NF 2653] gi|306407416|gb|EFM63620.1| DNA repair protein RecO [Brucella sp. NF 2653] Length = 182 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 1/176 (0%) Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + P Sbjct: 1 MGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEHFDDPL 60 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A+K+L Sbjct: 61 AAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWADKLLA 120 Query: 186 LPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 LPSF+ + D L AF +T YFL ++ + R FL + I Sbjct: 121 LPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRAI 176 >gi|306845265|ref|ZP_07477841.1| DNA repair protein RecO [Brucella sp. BO1] gi|306274424|gb|EFM56231.1| DNA repair protein RecO [Brucella sp. BO1] Length = 182 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 1/176 (0%) Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + P Sbjct: 1 MGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEHFDDPL 60 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+AEK+L Sbjct: 61 AAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWAEKLLS 120 Query: 186 LPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 LPSF+ + D L AF +T YFL ++ + R FL + I Sbjct: 121 LPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRAI 176 >gi|148260213|ref|YP_001234340.1| DNA repair protein RecO [Acidiphilium cryptum JF-5] gi|254790500|sp|A5FXT9|RECO_ACICJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146401894|gb|ABQ30421.1| DNA repair protein RecO [Acidiphilium cryptum JF-5] Length = 251 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + AI+L V ++GE ++ V+ +G G R G R PI Q GNL+ W + Sbjct: 1 MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLNIFLN 119 RL + LG E++ A ++ L L L + LPERE + L L Sbjct: 61 RLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I V+ EL LL+ +G+GLDL+ C ++G +DL +VSP++G AV R + Sbjct: 121 GIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDW 180 Query: 180 AEKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 ++L LP+FL + D + + LT +FL + A R + +L Sbjct: 181 VPRLLKLPAFLLDEDAADDKADLAACRDGLALTGHFLARDAFGARHAPLPTARLDLYDRL 240 Query: 237 LELI 240 + Sbjct: 241 TRRL 244 >gi|326402842|ref|YP_004282923.1| DNA repair protein RecO [Acidiphilium multivorum AIU301] gi|325049703|dbj|BAJ80041.1| DNA repair protein RecO [Acidiphilium multivorum AIU301] Length = 251 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + AI+L V ++GE ++ V+ +G G R G R PI Q GNL+ W + Sbjct: 1 MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLNIFLN 119 RL + LG E++ A ++ L L L + LPERE + L L Sbjct: 61 RLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I V+ EL LL+ +G+GLDL+ C ++G +DL +VSP++G AV R + Sbjct: 121 GIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDW 180 Query: 180 AEKMLVLPSF---LWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 A ++L LP+F + D + + LT +FL + A R +L Sbjct: 181 APRLLKLPAFLLDEDAADDEADLAACRDGLALTGHFLARDAFGARHAPLPTARLGLYDRL 240 Query: 237 LELI 240 + Sbjct: 241 TRRL 244 >gi|161702946|ref|YP_303133.2| DNA repair protein RecO [Ehrlichia canis str. Jake] Length = 244 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 79/245 (32%), Positives = 134/245 (54%), Gaps = 9/245 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R YG+ II+ + T+++G G R + + LQ G+ V V W + Sbjct: 1 MRWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLARYQKKTIHR--LQIGDHVNVTWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLN 119 +L NLG F++E+++S + ++L + L + LPE E +Y+ L+IF+N Sbjct: 59 KLISNLGYFKYEIIKSTLHHYIHNNLKTMCIAFFTSILDQVLPENEENYTIYNHLDIFMN 118 Query: 120 CHKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + V +I ++ +EL LL +GFGLDL++C V ++L+++SPK+G A+ ++VGLP Sbjct: 119 SVQNKDVNWQIKYLTLELTLLSELGFGLDLSQCAVNNTNENLIFISPKTGKAISQTVGLP 178 Query: 179 YAEKMLVLPSFLWKEEQTIDA----DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 Y + +L LP L+ K + +T YFL K+ L I R+ + Sbjct: 179 YKKSLLPLPPLLYNVYNNYTYKYSKTDFKVSLNVTGYFLKKHFLTEKNITLIKYRDEII- 237 Query: 235 KLLEL 239 KL++L Sbjct: 238 KLIDL 242 >gi|330814140|ref|YP_004358379.1| GTP-binding protein Era [Candidatus Pelagibacter sp. IMCC9063] gi|327487235|gb|AEA81640.1| GTP-binding protein Era [Candidatus Pelagibacter sp. IMCC9063] Length = 228 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 16/240 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L + +Y E + I +T ++G H G + S + + LQ GN +NW+S Sbjct: 1 MNWKDIGYLLKISNYSENSSIATFVTCEHGLHKGVIYGATSKKKKNYLQIGNKFSLNWKS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 + LG + E+ + AK + L +QS+ L + L ER EL+D + F+N Sbjct: 61 KSEDALGYYDLELKNAVTAKFFDEPIKLSFIQSLSELCCKTLAERYDYSELFDYTDFFIN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL-LWVSPKSGGAVCRSVGLP 178 + K+++ E LL IGF L+ +L W+ L Sbjct: 121 NISKAN-ALKLYILWEKELLTAIGFELNPDNKNFNFYKNNLSQWI-------------LE 166 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 ++ + P+FL + L + + L ++ + N I +RE KL E Sbjct: 167 IDKQKFLYPNFLIDSNSVYEDTDLYEGLVINKFILKRFVFEPNRIRFPEVRERIEKKLNE 226 >gi|72394258|gb|AAZ68535.1| recO-related protein [Ehrlichia canis str. Jake] Length = 248 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 9/244 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 WQD I++ +R YG+ II+ + T+++G G R + + LQ G+ V V W ++ Sbjct: 6 RWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLARYQKKTIHR--LQIGDHVNVTWSAK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLNC 120 L NLG F++E+++S + ++L + L + LPE E +Y+ L+IF+N Sbjct: 64 LISNLGYFKYEIIKSTLHHYIHNNLKTMCIAFFTSILDQVLPENEENYTIYNHLDIFMNS 123 Query: 121 HKIPSVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + V +I ++ +EL LL +GFGLDL++C V ++L+++SPK+G A+ ++VGLPY Sbjct: 124 VQNKDVNWQIKYLTLELTLLSELGFGLDLSQCAVNNTNENLIFISPKTGKAISQTVGLPY 183 Query: 180 AEKMLVLPSFLWKEEQTIDA----DSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +L LP L+ K + +T YFL K+ L I R+ + K Sbjct: 184 KKSLLPLPPLLYNVYNNYTYKYSKTDFKVSLNVTGYFLKKHFLTEKNITLIKYRDEII-K 242 Query: 236 LLEL 239 L++L Sbjct: 243 LIDL 246 >gi|241761300|ref|ZP_04759388.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374207|gb|EER63704.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 254 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 11/240 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A++L R + E I+ ++T Q G G+++ S +P+L GN V+ +WR ++ Sbjct: 5 SEPALLLTSRFHSENGAIIRLLTEQ-GLLTGYIQGAHSRYRRPLLFVGNYVQASWRDKVG 63 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH- 121 ++L E+ S ++ L L I P LPE +P L+ L L Sbjct: 64 RSLPSINIELRHSR-GLIMEHPLAALFLSWICPFTASVLPEGQPEPYLFQNLKRLLAIIE 122 Query: 122 --KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + V+ EL+LL +G+GL L++C++TG L WVSPK AV R + Sbjct: 123 KTDEPVLWMTELVRFELLLLSELGYGLHLSRCIITGQEACLDWVSPKHHAAVSRQAAQGH 182 Query: 180 AEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+LVLP FL D +SL+ +L+ +FL + +R+ + Sbjct: 183 EKKLLVLPDFLKAPFSVSCLDLPDQESLQQGLKLSGFFLRFHFEAAYYHRFFWVRQRLIK 242 >gi|260752832|ref|YP_003225725.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856306|ref|YP_162408.2| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ZM4] gi|258552195|gb|ACV75141.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775302|gb|AAV89297.2| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ZM4] Length = 254 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 11/240 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A++L R + E I+ ++T Q G G+++ S +P+L GN V+ +WR ++ Sbjct: 5 SEPALLLTSRFHSENGAIIRLLTEQ-GLLTGYIQGAHSRYRRPLLFVGNYVQASWRDKVG 63 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH- 121 ++L E+ S ++ L L I P LPE +P L+ L L Sbjct: 64 RSLPSINIELRHSR-GLIMEHPLAALFLSWICPFTASVLPEGQPEPYLFQNLKRLLAIIE 122 Query: 122 --KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + V+ EL+LL +G+GL L++C++TG L WVSPK AV R + Sbjct: 123 KTDEPVLWMTELVRFELLLLSELGYGLHLSRCIITGQEACLDWVSPKHHAAVSRQAAQGH 182 Query: 180 AEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+LVLP FL D ++L+ +L+ +FL + +R+ + Sbjct: 183 EKKLLVLPDFLKAPFSVSCLDLPDQEALQQGLKLSGFFLRFHFEAAYYHRFFGVRQRLIK 242 >gi|71083742|ref|YP_266462.1| recombination protein O [Candidatus Pelagibacter ubique HTCC1062] gi|91763222|ref|ZP_01265186.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1002] gi|71062855|gb|AAZ21858.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1062] gi|91717635|gb|EAS84286.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1002] Length = 226 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 21/241 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D A ++ Y E +II EV T +G+ G + G S +++ LQ GN + VN+ S Sbjct: 1 MNWDDSAYLVSKNRYSENSIIAEVFTENHGKISGIIFGGTSKKIKNYLQIGNKIYVNYNS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 + +G F+ E+L++ + L + S + L + L E + E++ +++ F Sbjct: 61 KSVTRIGYFKIEILKALTPLYFDQNQKLSCITSAMHLIKLLTAEAQSNKEIFKLIDKFFE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + + ++ EL LLK +G+ L+L + +V + Sbjct: 121 ILNSEN-WIQKYIFWELELLKLLGYDLELKTMAEKEIVDSEVNYYVKSST---------- 169 Query: 178 PYAEKMLVLPSFLWKEEQ--TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +K +P+FL E + LK ++DY L K L+ N ++ R +F+ Sbjct: 170 --EKK--SIPNFLIDENNMDVNLKNLLKGLKLVSDY-LEKSILKPNNLNLPTSRTHFINL 224 Query: 236 L 236 L Sbjct: 225 L 225 >gi|83311360|ref|YP_421624.1| recombinational DNA repair protein [Magnetospirillum magneticum AMB-1] gi|82946201|dbj|BAE51065.1| Recombinational DNA repair protein [Magnetospirillum magneticum AMB-1] Length = 206 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 43/100 (43%), Positives = 55/100 (55%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD ++L VR +GE + ++TR +GRH G V GQ +PILQ GNLVR W Sbjct: 1 MEWDDDGVVLAVRRHGETGAVASLLTRSHGRHAGLVHGGQGRANRPILQPGNLVRARWTG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF 100 RL + LG FR E+L +H A L + L L S L Sbjct: 61 RLPEQLGNFRLEMLHAHAAAFLDDAARLAALGSACALAEA 100 >gi|85709082|ref|ZP_01040148.1| DNA repair protein RecO [Erythrobacter sp. NAP1] gi|85690616|gb|EAQ30619.1| DNA repair protein RecO [Erythrobacter sp. NAP1] Length = 200 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 5/149 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M AI++ R++GE +I +MT ++G +V G+ +++P++ GN + RS Sbjct: 1 MNISVPAILVAARAHGETAVIARLMTEEHGLVAAYVAGGRGRQLRPVVIPGNSLEAEIRS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 + L R E+ S A ++ L + L LPER P L+ L Sbjct: 61 KSDSQLPFARIELAVSR-APWMTEPLPAAAIGWACALTASTLPERNPYPSLFSAFEALLE 119 Query: 120 CH-KIPSV--IGKIFVQIELMLLKNIGFG 145 PS V E MLL+ +G+G Sbjct: 120 AICHAPSARGWLAAMVAYEAMLLRELGYG 148 >gi|103486573|ref|YP_616134.1| recombinational DNA repair protein (RecF pathway)-like protein [Sphingopyxis alaskensis RB2256] gi|98976650|gb|ABF52801.1| Recombinational DNA repair protein (RecF pathway)-like protein [Sphingopyxis alaskensis RB2256] Length = 192 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 46/233 (19%) Query: 12 VRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRF 71 +R++GE IL +T + G G+VR G+S R++PIL GN V + RSR + LG Sbjct: 1 MRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATV 60 Query: 72 EVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCHK---IPSVI 127 E+LES A LL L + + L LPE +P LY L+ L Sbjct: 61 ELLESR-APLLGEPLAAAAIDWVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQW 119 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL+LL +GFGL+ +K Sbjct: 120 ALALGRYELLLLAELGFGLE---------------------------------DK----- 141 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 + + + +T +F+++ L +R+ + +L ++ Sbjct: 142 ---PRAASSPSMAEMLDFLSVTGHFIDRDLLDGRNRALAGVRQRLIDRLGRVV 191 >gi|296282559|ref|ZP_06860557.1| hypothetical protein CbatJ_03005 [Citromicrobium bathyomarinum JL354] Length = 198 Score = 147 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 5/149 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AI+L R +GE +I ++T + G +V GQ R++P++ GN V + R+ Sbjct: 1 MQLKAPAIVLAARPHGENAVIARMLTHEAGMVAAYVAGGQGRRLRPVVIPGNSVEADIRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 R A L + E++ S A L+ L + + L LPER P LYD L L+ Sbjct: 61 RSASQLPFGKVELVASR-APWLNEPLPAAAILWVTALTASTLPERNPYPSLYDALGGLLD 119 Query: 120 CH-KIPSV--IGKIFVQIELMLLKNIGFG 145 PS + E++LL+ +G+G Sbjct: 120 AICHAPSARGWAPALLSYEVLLLRELGYG 148 >gi|149186742|ref|ZP_01865053.1| hypothetical protein ED21_29626 [Erythrobacter sp. SD-21] gi|148829650|gb|EDL48090.1| hypothetical protein ED21_29626 [Erythrobacter sp. SD-21] Length = 198 Score = 147 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 7/164 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + AI+L R +GE +I ++T + G +V G+ +++P++ GNLV R+ Sbjct: 1 MHLRAPAILLAARPHGETAVIARLLTEESGVVAAYVAGGRGRQLRPVVIPGNLVEAEIRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 + L R E+ +S L+ L + L LPER P LY L L Sbjct: 61 KSDSQLPFARLELAQSR-GPWLTEPLPAAAIAWTCALTASALPERNPYPSLYSALAALLE 119 Query: 120 CH-KIPSV--IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL 160 PS E++LL+ +G+G TK V+ G+ Q L Sbjct: 120 AICNAPSARGWAGALATYEVLLLRELGYG--GTKPVIEGLEQAL 161 >gi|85374495|ref|YP_458557.1| hypothetical protein ELI_08340 [Erythrobacter litoralis HTCC2594] gi|84787578|gb|ABC63760.1| hypothetical protein ELI_08340 [Erythrobacter litoralis HTCC2594] Length = 200 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 5/146 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + AI+L R +GE +I ++T ++G G+V G+ +++P++ GNLV + R++ Sbjct: 6 RAPAILLAARPHGETAVIARLLTEEFGMVAGYVAGGRGRQLRPVVIPGNLVELELRAKSD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH- 121 L + E++ES LS L +Q L LPER LY L L+ Sbjct: 66 SQLPFAKLELVESR-GPWLSEPLPAAAIQWATALTATALPERNAYPNLYSALVALLDAVC 124 Query: 122 KIPSV--IGKIFVQIELMLLKNIGFG 145 + PS + E +LL+ +G+G Sbjct: 125 QAPSARGWAPALLSYEALLLRELGYG 150 >gi|6647943|sp|Q9ZD01|Y549_RICPR RecName: Full=Uncharacterized protein RP549 gi|3861098|emb|CAA14998.1| unknown [Rickettsia prowazekii] Length = 135 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + L +L+ + + ++ EL LL G+ LDLTKC V+ VT DL +VSPKS Sbjct: 9 FFSFLINYLDNL-SKNFCFRDYISFELNLLAETGYKLDLTKCCVSHVTTDLTYVSPKSAR 67 Query: 170 AVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR 229 A+ VG PY +K+L+LP FL ++ I + K A LT+YF N+Y +N R Sbjct: 68 ALSYKVGKPYRDKLLILPKFLLAKDSEITLEEKKQALTLTNYFFNRYLFHNNRQV--KAR 125 Query: 230 ENFLGKL 236 E F+ + Sbjct: 126 EEFIEYI 132 >gi|87200674|ref|YP_497931.1| recombinational DNA repair protein (RecF pathway)-like [Novosphingobium aromaticivorans DSM 12444] gi|87136355|gb|ABD27097.1| Recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 202 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 5/149 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AI+ VR +GE ++ +MT ++G +V + ++P+L GNL+ R Sbjct: 1 MQIRAPAILCSVRPHGEHGAVVRLMTEEHGLAAAYVAGARGRELRPLLIPGNLLEAEVRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 R A L R E++ S L+ L G+ L LPE P LYD L L+ Sbjct: 61 RAASQLPSARLELVASR-GPWLTEPLPSAGIGWACALTAATLPEGHPYPLLYDSLGALLD 119 Query: 120 CH---KIPSVIGKIFVQIELMLLKNIGFG 145 ++ E++LL+ +G+G Sbjct: 120 AICLAPSARGWARVLAGYEVLLLREVGYG 148 >gi|23011689|ref|ZP_00051976.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 117 Score = 142 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 6/110 (5%) Query: 131 FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFL 190 V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G PY +++L LP FL Sbjct: 1 MVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPYRDRLLPLPPFL 60 Query: 191 WKEEQT------IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +Q D +++ F LT YFL+++ + R F+ Sbjct: 61 RDRDQPGSGWQTPDEHAVREGFTLTGYFLDQHVWRPRAQVMPEERARFVA 110 >gi|253576084|ref|ZP_04853416.1| DNA repair protein RecO [Paenibacillus sp. oral taxon 786 str. D14] gi|251844427|gb|EES72443.1| DNA repair protein RecO [Paenibacillus sp. oral taxon 786 str. D14] Length = 249 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 10/196 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQA---GNLVR 55 M ++ + I++ YGE N I+ + T G+ VR + + + + Q G V Sbjct: 1 MLYRVEGIVIRSMDYGEGNKIITLCTETSGKIGVLVRGAKKVKSRHGALTQPFTHGEYVF 60 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 LG + E++ESH + L Y + L + L + E + L Sbjct: 61 FRQNG----GLGTLNQGEMIESHFSLREDLFLAAYASYACELLDKTLQDEEVGSFWFTQL 116 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ + E+ +L+ G+G CV G D +VSP+ GG +CRS Sbjct: 117 KACLDGLSSGKDPQIVTHLFEMKILQAAGYGPSFESCVSCGRVDDSPYVSPRLGGRLCRS 176 Query: 175 VGLPYAEKMLVLPSFL 190 M V P L Sbjct: 177 CRHQDPAAMQVTPGVL 192 >gi|218515340|ref|ZP_03512180.1| DNA repair protein RecO [Rhizobium etli 8C-3] Length = 84 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 47/83 (56%), Positives = 61/83 (73%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLS 83 RL ++LGEFR E + A+L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLME 83 >gi|262277164|ref|ZP_06054957.1| DNA repair protein RecO [alpha proteobacterium HIMB114] gi|262224267|gb|EEY74726.1| DNA repair protein RecO [alpha proteobacterium HIMB114] Length = 208 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 3/162 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D +L V + E + +++V +R++G G V S + +P LQ GN +++N+ S Sbjct: 1 MRWSDIGYLLSVSATKENSSLVKVFSREHGCVTGVVYGSSSKKKKPDLQIGNKIKLNFNS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + LG F E++E+ K + L + SI + + +PE++ E +D + + Sbjct: 61 KNEDALGYFSIELMENISIKFFNDLKKLNLLIISIEVISKIMPEQQKYTECFDEYDQLIK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + S+ K ++ E LKNIG+G+DL + V + +L Sbjct: 121 SLEGDSL--KSYLIWEFNFLKNIGYGVDLNEEGFNPVIKSIL 160 >gi|172056863|ref|YP_001813323.1| DNA repair protein RecO [Exiguobacterium sibiricum 255-15] gi|229485534|sp|B1YL74|RECO_EXIS2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|171989384|gb|ACB60306.1| DNA repair protein RecO [Exiguobacterium sibiricum 255-15] Length = 249 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 19/233 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNL-VRVN 57 M + + ++L YGE N I+ ++TR+YG+ R + R Q + V Sbjct: 1 MIDKAEGLVLRTVVYGESNKIITLLTREYGKLAVMARGAKKPGSRFNAASQPFVRAIYVY 60 Query: 58 WRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 RSR LG+ + +V+ + L Y + + + L ER P LYD+ Sbjct: 61 PRSR---GLGQLKSADVITGYSKIRQDVFLMAYAMYLLELADKALDERVPQPALYDLFVD 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR--- 173 L + +EL LL+++G L C V G + S GG +CR Sbjct: 118 GLEAMDEGLDPDVVSFIVELRLLRHLGIAPHLNGCTVCGSVEAPFAFSLNHGGLLCRRHR 177 Query: 174 -------SVGLPYAEKMLVLPSFLWKEEQTID--ADSLKSAFQLTDYFLNKYA 217 S+ A+ + V + + T+D ++ + Q+ D ++ +Y+ Sbjct: 178 QEDEHAVSLTESVAKMLYVFSVYDFSRIGTVDVKPETKRLLRQIMDAYMERYS 230 >gi|326386768|ref|ZP_08208389.1| recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208821|gb|EGD59617.1| recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 202 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 5/149 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + +AI+ +R +GE I+ +T +G +V + ++P+L GN + V R+ Sbjct: 1 MLIRVEAILCAMRPHGEHGGIIRALTGDHGMVAAYVSGARGRTLRPVLIPGNTLAVEIRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 R L R E++ S A L L + L LPE P L+ L L+ Sbjct: 61 RGGSQLPGARTELVASR-APWLGEPLPAAAIDWATALTAATLPEGHPYPALHTALGALLD 119 Query: 120 CH-KIPSV--IGKIFVQIELMLLKNIGFG 145 PS ++ E +LL+ +G+G Sbjct: 120 AICHAPSARGWARVLAGYEALLLREVGYG 148 >gi|6647944|sp|Q9ZD02|Y548_RICPR RecName: Full=Uncharacterized protein RP548 gi|3861097|emb|CAA14997.1| unknown [Rickettsia prowazekii] Length = 115 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 2/112 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIKE-SSKKNKFIYQEGNIVDFLWKA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELY 111 RL +++G + E+++S+ + + LY S++ L + L ERE + Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVISLIQELFHEREEHSIFF 111 >gi|188585832|ref|YP_001917377.1| DNA repair protein RecO [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350519|gb|ACB84789.1| DNA repair protein RecO [Natranaerobius thermophilus JW/NM-WN-LF] Length = 257 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 16/185 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVRVN 57 + DA+++ R Y + + I+ + T YGR V+ + ++ I+Q+ GN + Sbjct: 5 YNSDAVVIRSRDYRDYDKIINLFTPYYGRVSAVVKGVKKPKSKLAGIVQSFTYGNYQLYS 64 Query: 58 WRS--RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 +S RL Q F+ L + L+S+ + + L + + +PE E L+ + Sbjct: 65 GKSLGRLVQGKVLHGFQELRTDLV-LMSAGMCILEL-----IDKAIPEGEEYPALFGVTL 118 Query: 116 IFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCR 173 S + ++ E L+ N+G +L+ C+ G TQ L+ P++GG +C Sbjct: 119 SCF-HLLEKSYPPSLVLRIFEAKLIHNLGVSPELSGCINHGSITQGNLYFDPETGGLICE 177 Query: 174 SVGLP 178 + Sbjct: 178 TCFEQ 182 >gi|308069927|ref|YP_003871532.1| DNA repair protein RecO [Paenibacillus polymyxa E681] gi|305859206|gb|ADM70994.1| DNA repair protein recO (Recombination protein O) [Paenibacillus polymyxa E681] Length = 250 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 13/198 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQA---GNLVR 55 M ++ + I++ YGE N I+ + T G+ VR + + + + Q G V Sbjct: 1 MLYRVEGIVIRSMDYGEGNKIITLCTESGGKAGVLVRGAKKSKSRHAALTQPFTYGEFVF 60 Query: 56 VNWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 LG E+++SH + Y + L R L + E + L Sbjct: 61 FR-----NTGLGTLNAGEIIQSHHTLREDITKAAYASYACELLDRVLQDEETGAFWFKQL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVC 172 L + + E +L+ G+ L C+ +G + ++VSP+ GG +C Sbjct: 116 KACLEALESGKDPLIVMSIYEFKILQAAGYAPQLDACISSGQQCADEDMFVSPRLGGVLC 175 Query: 173 RSVGLPYAEKMLVLPSFL 190 RS + V P L Sbjct: 176 RSYKHFDPAALSVTPRTL 193 >gi|315645985|ref|ZP_07899106.1| DNA repair protein RecO [Paenibacillus vortex V453] gi|315278746|gb|EFU42060.1| DNA repair protein RecO [Paenibacillus vortex V453] Length = 262 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 16/200 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVR 55 M ++ + I++ YGE N I+ + T++ G+ VR + R + Q G V Sbjct: 12 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 71 Query: 56 VNWRSRLAQNLGEFRF-EVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDM 113 R LG E++ESH +L + Y + L R L + E + Sbjct: 72 F----RNGTGLGNLNAGEIMESH-HRLREDLVKAAYASYACELLDRVLQDEETGAFWFHQ 126 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGA 170 L + + I E+ +L+ G+G +L C+ T +D+L VSP+ GG Sbjct: 127 LKACMEALQEDKDPQIIINLYEMKILQAAGYGPELDVCISCNQTRKDEDML-VSPRLGGV 185 Query: 171 VCRSVGLPYAEKMLVLPSFL 190 +CR M V P L Sbjct: 186 LCRYCKHLDPPAMSVTPRTL 205 >gi|329924075|ref|ZP_08279338.1| DNA repair protein RecO [Paenibacillus sp. HGF5] gi|328940914|gb|EGG37222.1| DNA repair protein RecO [Paenibacillus sp. HGF5] Length = 251 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 75/198 (37%), Gaps = 12/198 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVR 55 M ++ + I++ YGE N I+ + T++ G+ VR + R + Q G V Sbjct: 1 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 60 Query: 56 VNWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R LG E++ESH Y + L R L + E + L Sbjct: 61 F----RNGTGLGNLNAGEIMESHHGLREDLVKAAYASYACELLDRVLQDEETGAFWFHQL 116 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVC 172 L + I E+ +L+ G+G +L C+ + + VSP+ GG +C Sbjct: 117 KACLEALQEDKDPQIIINLYEMKILQAAGYGPELDVCISCNQSRKDEDMLVSPRLGGVLC 176 Query: 173 RSVGLPYAEKMLVLPSFL 190 R M + P L Sbjct: 177 RYCKHLDPPAMAISPRTL 194 >gi|261405618|ref|YP_003241859.1| DNA repair protein RecO [Paenibacillus sp. Y412MC10] gi|261282081|gb|ACX64052.1| DNA repair protein RecO [Paenibacillus sp. Y412MC10] Length = 251 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 12/181 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVR 55 M ++ + I++ YGE N I+ + T++ G+ VR + R + Q G V Sbjct: 1 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 60 Query: 56 VNWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R LG E++ESH Y + L R L + E + L Sbjct: 61 F----RNGTGLGNLNAGEIMESHHGLREDLVKAAYASYACELLDRVLQDEETGAFWFHQL 116 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVC 172 L + I E+ +L+ G+G +L C+ + + VSP+ GG +C Sbjct: 117 KACLEALQEDKDPQIIINLYEMKILQAAGYGPELDVCISCNQSRKDEDMLVSPRLGGVLC 176 Query: 173 R 173 R Sbjct: 177 R 177 >gi|310643036|ref|YP_003947794.1| DNA repair protein reco [Paenibacillus polymyxa SC2] gi|309247986|gb|ADO57553.1| DNA repair protein RecO [Paenibacillus polymyxa SC2] Length = 246 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 72/195 (36%), Gaps = 19/195 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQA---GNLVRVNWRS 60 + I++ YGE N I+ + T G+ VR + + + + Q G V Sbjct: 2 EGIVIRSMDYGEGNKIITLCTESGGKVGVLVRGAKKSKSRHAALTQPFTYGEFVFFR--- 58 Query: 61 RLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 LG E+++SH + Y + L R L + E + L L Sbjct: 59 --NTGLGTLNAGEIIQSHHTLREDITKAAYASYACELLDRVLQDEETGAFWFKQLKACLE 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCRS--- 174 + + E +L+ G+ L C+ +G + +++SP+ GG +CR Sbjct: 117 ALESGKDPLIVMSIYEFKILQAAGYAPQLDACISSGQQCADEDMFISPRLGGVLCRGYKH 176 Query: 175 ---VGLPYAEKMLVL 186 L A + L L Sbjct: 177 FDPAALSVAPRTLKL 191 >gi|194017652|ref|ZP_03056262.1| DNA repair protein RecO [Bacillus pumilus ATCC 7061] gi|194010552|gb|EDW20124.1| DNA repair protein RecO [Bacillus pumilus ATCC 7061] Length = 256 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 23/235 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ I Q + + Sbjct: 1 MLIKSEGIVLRTTDYGETNKIVTLLTREHGKIGVMARGAKKSNSRLSAISQP--FLYGTF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + E++ES L Y L + E++P L+++L Sbjct: 59 LIQSSTGLGTLQQGEMIESMRTIREDLFLTAYAAYMTELLDKGTEEKKPNPYLFELLLQS 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV-- 175 L + I +E+ +L +G +L +CV G + S + G +C++ Sbjct: 119 LRHLNEGTDADVILFIVEVKMLSVMGMKPELDQCVHCGQKEGQFHFSIRDNGFICQNCFS 178 Query: 176 GLPYAEKMLVLPS-----------FLWKEEQTID--ADSLKSAFQLTDYFLNKYA 217 PY L L F +D + + Q+ D++ +Y+ Sbjct: 179 KDPYK---LPLSPAAARLLRLFHYFDLSRLGQVDVKPQTKQEIRQVLDHYYEEYS 230 >gi|157693027|ref|YP_001487489.1| DNA repair protein RecO [Bacillus pumilus SAFR-032] gi|166918728|sp|A8FFB2|RECO_BACP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157681785|gb|ABV62929.1| DNA repair protein RecO [Bacillus pumilus SAFR-032] Length = 256 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 23/235 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ I Q + + Sbjct: 1 MLIKSEGIVLRTTDYGETNKIVTLLTREHGKIGVMARGAKKSNSRLSAISQP--FLYGTF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + E++ES L Y L + E++P L+++L Sbjct: 59 LIQSSTGLGTLQQGEMIESMRTIREDLFLTAYAAYMTELLDKGTEEKKPNPYLFELLLQS 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV-- 175 L + I +E+ +L +G +L +CV G + S + G +C++ Sbjct: 119 LRHLNEGTDADIILFIVEVKMLSVMGMKPELDQCVHCGQKEGQFHFSIRDNGFICQNCFS 178 Query: 176 GLPYAEKMLVLPS-----------FLWKEEQTID--ADSLKSAFQLTDYFLNKYA 217 PY L L F +D + + Q+ D++ ++Y+ Sbjct: 179 KDPYK---LPLSPAAARLLRLFHYFDLSRLGQVDVKPQTKQEIRQVLDHYYDEYS 230 >gi|117924217|ref|YP_864834.1| DNA replication and repair protein RecO [Magnetococcus sp. MC-1] gi|117607973|gb|ABK43428.1| DNA replication and repair protein RecO [Magnetococcus sp. MC-1] Length = 242 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 83/222 (37%), Gaps = 16/222 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 AIIL + + ++++ + T+ +G R + L G+L + L Sbjct: 8 PAIILRRIPFRDSSLVVSLFTQDHGVRAVMARGA--RKGSKTLPRGDLAGYH---TLGVQ 62 Query: 66 LGEFRFE-VLESHCAKLLSSSLFLY----GLQSIVPLF----RFLPEREPCLELYDMLNI 116 LG + +L A++L L G + + R LP + +L+ L Sbjct: 63 LGGREGQNMLTLRSAEILQPRHGLLHQRVGSSAAQLMLEQVYRLLPVEDANPKLFGALQE 122 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L+ + ++ + LL N+GFG + C G DL + S K VC G Sbjct: 123 ALDRLEAGEAALEVVGLWQGFLLHNLGFGWQVAHCAGCGGETDLRFFSTKRNQTVCAPCG 182 Query: 177 LPYAEKMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKY 216 P+ ++L LP + Q A LT L ++ Sbjct: 183 TPHRHRLLPLPEGVLAVMRGQPGGAADQAELVMLTTALLAQH 224 >gi|300311262|ref|YP_003775354.1| DNA repair protein [Herbaspirillum seropedicae SmR1] gi|300074047|gb|ADJ63446.1| DNA repair protein [Herbaspirillum seropedicae SmR1] Length = 286 Score = 105 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 87/244 (35%), Gaps = 34/244 (13%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V +R +GR + + +++ LQ + ++W + Sbjct: 58 PGFVLHSYPYKETSLIIDVFSRDHGRVALVAKGAKRPHSKLRGALQTFQPLSLSWSGKS- 116 Query: 64 QNLGEFRFEVLESHCAKL------LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 EV A+ L S L G L + L + L+D Sbjct: 117 --------EVRTLTDAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVAT 168 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW-VSPKSG---GAV 171 LN + Q E +LLK G + + CVV+G V DL++ V P+ G + Sbjct: 169 LNKLAHGENAPIVLRQFERILLKQTGVAGNWSHCVVSGKTVRPDLIYVVDPEQGTRPERL 228 Query: 172 CRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL-QHNIIHCHLLRE 230 + +L + E D + QL FL +Y L H R+ Sbjct: 229 SDRAPKVSGKTLL-----DMEREDYSDPTT-----QLQSKFLMRYLLAHHLGGAQLNTRQ 278 Query: 231 NFLG 234 + Sbjct: 279 ILID 282 >gi|212638695|ref|YP_002315215.1| DNA repair protein RecO [Anoxybacillus flavithermus WK1] gi|212560175|gb|ACJ33230.1| Recombinational DNA repair protein (RecF pathway) [Anoxybacillus flavithermus WK1] Length = 268 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 71/188 (37%), Gaps = 5/188 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNL-VRVNWRSRL 62 + I++ YGE N I+ + TR++G+ R + S R+ + Q + + +SR Sbjct: 21 EGIVIRTIDYGETNKIVTIFTREWGKVAAMARGAKKPSSRLSSVTQIFTYGIFLIQKSRG 80 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +L + E+L + L Y I + ER P L+++L L Sbjct: 81 VGSL--HQGELLSTMRHIREDIFLTAYASYIIELTDKATEERRPNPYLFELLLQTLTYMN 138 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ LL G L C + G + S GG +C + Sbjct: 139 EGLDAEVLTYIYEMKLLPAFGLYPKLDGCAICGEKEGTFAFSIAQGGFLCHRCFEHDPHR 198 Query: 183 MLVLPSFL 190 + + PS L Sbjct: 199 IPMTPSVL 206 >gi|152980172|ref|YP_001353062.1| DNA repair protein RecO [Janthinobacterium sp. Marseille] gi|151280249|gb|ABR88659.1| RecO DNA repair protein [Janthinobacterium sp. Marseille] Length = 287 Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 85/246 (34%), Gaps = 29/246 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V +R +GR + + +++ +LQ + V W + Sbjct: 59 PGFVLHSYPYKETSLIVDVFSRDHGRIALVAKGAKRPHSKLRGVLQTFQPLSVGWSGK-- 116 Query: 64 QNLGEFRFEVLESHCAKL------LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 EV A+ L S L G L + L +P L+D Sbjct: 117 -------AEVRTLTAAEWVGGLLPLEKSALLCGFYLNELLVKLLARDDPHPALFDHYVSA 169 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL--LWV-SPKSGGAVCRS 174 LN + + E LLK G D C +G L ++V P+ G R Sbjct: 170 LNQLAHDEPAPIVLRKFERALLKETGVASDWRVCTASGKAIVLEQIYVLDPERGPRPARP 229 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT-DYFLNKYALQHNIIHCHLLRENFL 233 V P K ++ + T FL ++ L H++ L L Sbjct: 230 AD--------VWPRVSGKTLLDMENEDYTDTQTQTQSKFLMRFLLAHHLNGAPLNTRQIL 281 Query: 234 GKLLEL 239 LL+L Sbjct: 282 IDLLQL 287 >gi|329912352|ref|ZP_08275733.1| DNA recombination and repair protein RecO [Oxalobacteraceae bacterium IMCC9480] gi|327545639|gb|EGF30797.1| DNA recombination and repair protein RecO [Oxalobacteraceae bacterium IMCC9480] Length = 264 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 17/157 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L + E ++I++V TR++GR + + ++ +LQ + ++W + Sbjct: 36 PGFVLHSYPHKETSLIIDVFTREHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWTGKS- 94 Query: 64 QNLGEFRFEVLESHCAKL------LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 E+ A+ L S L G L + + +P L+D Sbjct: 95 --------EIRTLTAAEWVGGLLPLEKSALLCGFYLNELLVKLIARDDPHPGLFDHYVSA 146 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 LN + + EL L+K G DL+ C T Sbjct: 147 LNQLAHGEAATIVLRKFELSLMKQTGVAADLSLCSGT 183 >gi|145588595|ref|YP_001155192.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|254764653|sp|A4SVW4|RECO_POLSQ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145047001|gb|ABP33628.1| DNA replication and repair protein RecO [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 244 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 22/227 (9%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L Y E ++IL+V TRQ+GR + + ++P+LQ + V+W + Sbjct: 9 EPAFVLHSIPYKETSLILDVFTRQHGRMALIAKGAKRPHSVLRPVLQRFQPLLVSWSGKS 68 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM----LNIFL 118 L L+ +L L G L +FL + LYD +N Sbjct: 69 E--LRTLTKSEWVGGMPSLVGDAL-LCGFYLNELLVKFLAREDDYERLYDRYSETINALS 125 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSG-GAVCRS 174 N + +I EL LL+ G+ L +CV T V + L P+ G + Sbjct: 126 NLEFESKGLEEILRPFELSLLQETGYAAALDRCVETNDSPVFEALYVYQPERGVRPIQVD 185 Query: 175 VGLPYA----EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + + +L D ++L + QL + L + Sbjct: 186 DPGHWPVLRGKSLLA-----IAAGDFSDPETLSESKQLMRFLLGLHL 227 >gi|251796249|ref|YP_003010980.1| DNA repair protein RecO [Paenibacillus sp. JDR-2] gi|247543875|gb|ACT00894.1| DNA repair protein RecO [Paenibacillus sp. JDR-2] Length = 249 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 11/182 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVR 55 M ++ + I++ YGE N I+ ++T+ G+ VR + R + Q G V Sbjct: 1 MLYRVEGIVIRSMDYGEGNKIITLLTKTNGKLGVMVRGAKKVKSRHASLAQPFTYGEFVF 60 Query: 56 VNWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + LG E+LESH L Y + L E E L++ L Sbjct: 61 FR-----NKGLGTLNAGEILESHHLLREQLDLAAYASYLAELTDKMLQEDESGAMLFEQL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + + E+ +L+ G+ +L CV Q ++P +GG +C Sbjct: 116 KAGLAAMEEGKDPQIVSHLFEMRILEAAGYAPELEICVNCSSEQGPFRLNPHAGGVLCTR 175 Query: 175 VG 176 Sbjct: 176 CA 177 >gi|304398618|ref|ZP_07380490.1| DNA repair protein RecO [Pantoea sp. aB] gi|304353829|gb|EFM18204.1| DNA repair protein RecO [Pantoea sp. aB] Length = 242 Score = 99.8 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 22/174 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPFSETSLLLDLFSESEGRVRVLAKGARSRRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 W R EV A+ +S +L L G+ L+ R L + P EL+ Sbjct: 60 WSGR---------GEVKTLRNAEAVSLALPLSGITLYCGLYVNELVSRVLQQESPFPELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + + EL LL ++G+G+D C +G V+ D+ + Sbjct: 111 FDYLNCLQALASTHGKPEPALRRFELALLGHLGYGVDFLHCAGSGEPVSDDMTY 164 >gi|171463194|ref|YP_001797307.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. necessarius STIR1] gi|254764652|sp|B1XTL6|RECO_POLNS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|171192732|gb|ACB43693.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 244 Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 9/154 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L Y E ++IL+V TRQYGR + + ++P+LQ + V+W + Sbjct: 9 EPAFVLHSIPYKETSLILDVFTRQYGRMALIAKGAKRQHSTLRPVLQRFQPLLVSWSGKS 68 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM----LNIFL 118 L L+ +L L G L +FL + +LYD +N Sbjct: 69 E--LRTLTKSEWVGGMPSLVGDAL-LCGFYLNELLVKFLAREDDYEKLYDRYAETINALS 125 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 N + +I Q EL LL+ G+ L +CV Sbjct: 126 NLEFESKGLEEILRQFELSLLQETGYAAALDRCV 159 >gi|52081074|ref|YP_079865.1| DNA repair protein RecO [Bacillus licheniformis ATCC 14580] gi|52786454|ref|YP_092283.1| DNA repair protein RecO [Bacillus licheniformis ATCC 14580] gi|319644967|ref|ZP_07999200.1| DNA repair protein recO [Bacillus sp. BT1B_CT2] gi|81609046|sp|Q65H74|RECO_BACLD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52004285|gb|AAU24227.1| RecO [Bacillus licheniformis ATCC 14580] gi|52348956|gb|AAU41590.1| RecO [Bacillus licheniformis ATCC 14580] gi|317392776|gb|EFV73570.1| DNA repair protein recO [Bacillus sp. BT1B_CT2] Length = 256 Score = 97.9 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ I Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIITLLTREHGKIGVLARGAKKPNSRLSAISQP--FLYASF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + LG + E++ES L Y + + E++P L+++L Sbjct: 59 LFRKSSGLGTLEQGEMIESMRNIREDLFLTAYAAYIAELIDKGTEEKKPNPFLFELLLQS 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS--V 175 + + I IE+ +L +G +L +CV S + G +C Sbjct: 119 MRRLNDGTDPDIIANLIEVKMLSVMGLYPELDECVHCKSKDGTFHFSIRDNGFICHRCFA 178 Query: 176 GLPYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYRIPLSPASARLLRL 196 >gi|308187804|ref|YP_003931935.1| DNA repair protein recO (Recombination protein O) [Pantoea vagans C9-1] gi|308058314|gb|ADO10486.1| DNA repair protein recO (Recombination protein O) [Pantoea vagans C9-1] Length = 259 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 22/174 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + GR + +S R ++ LQ + V Sbjct: 18 MEGWQ-RAFVLHSRPFSETSLLLDLFSENEGRVRVLAKGARSRRSQLKGALQPFTPLLVR 76 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFL-PEREPCLEL 110 W R V A+ +S +L L G+ L+ R L PE Sbjct: 77 WSGRGD---------VKTLRNAEAVSLALPLSGITLYCGLYVNELVSRVLQPESPFQELF 127 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 +D LN + EL LL ++G+G+D C +G V+ D+ + Sbjct: 128 FDYLNCLQALASTHGKPEPALRRFELALLGHLGYGVDFLHCAGSGEPVSDDMTY 181 >gi|157371902|ref|YP_001479891.1| DNA repair protein RecO [Serratia proteamaculans 568] gi|166918732|sp|A8GI23|RECO_SERP5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157323666|gb|ABV42763.1| DNA repair protein RecO [Serratia proteamaculans 568] Length = 243 Score = 97.5 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 18/164 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M + A +L R Y E +++L++ T +GR + +S R ++ LQ + V W Sbjct: 1 MDGWERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELYD 112 R EV A+ +S L L GL L R L + L+ Sbjct: 61 GGR---------GEVKTLRSAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFF 111 Query: 113 MLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG 155 L V + ++ EL LL ++G+GLD C +G Sbjct: 112 DYLQCLQALAAEDVSPEQALRQFELALLNHLGYGLDFLHCAGSG 155 >gi|56421021|ref|YP_148339.1| DNA repair protein RecO [Geobacillus kaustophilus HTA426] gi|261418496|ref|YP_003252178.1| DNA repair protein RecO [Geobacillus sp. Y412MC61] gi|319767543|ref|YP_004133044.1| DNA repair protein RecO [Geobacillus sp. Y412MC52] gi|61214670|sp|Q5KX15|RECO_GEOKA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56380863|dbj|BAD76771.1| DNA repair protein (recombination protein O) [Geobacillus kaustophilus HTA426] gi|261374953|gb|ACX77696.1| DNA repair protein RecO [Geobacillus sp. Y412MC61] gi|317112409|gb|ADU94901.1| DNA repair protein RecO [Geobacillus sp. Y412MC52] Length = 262 Score = 97.1 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 10/187 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVRVNWRS 60 +AI++ YGE N I+ + TR++G+ R + S R+ + Q G+ V R Sbjct: 6 EAIVMRTVDYGETNKIVTLFTREWGKVAAMARGAKKPSSRLSAVTQPLSYGHYVIRRSRG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + G E+++S A Y + + + E++ L+++L L Sbjct: 66 VGVLHQG----ELIDSMRALREDLFAAAYAVYIVELTDKSTEEQKRNPYLFELLLQTLQY 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L +G L +C G T+ S K G +C Sbjct: 122 MSEGRDLEILTFIYEMKMLAVLGIPPVLDRCARCGATEGRFSFSVKEAGFLCHRCEASDP 181 Query: 181 EKMLVLP 187 + L Sbjct: 182 HR-FPLS 187 >gi|270265298|ref|ZP_06193559.1| hypothetical protein SOD_m00300 [Serratia odorifera 4Rx13] gi|270040702|gb|EFA13805.1| hypothetical protein SOD_m00300 [Serratia odorifera 4Rx13] Length = 243 Score = 97.1 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 65/165 (39%), Gaps = 18/165 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M + A +L R Y E +++L++ T +GR + +S R ++ LQ + V W Sbjct: 1 MDGWERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELYD 112 R EV A+ +S L L GL L R L + L+ Sbjct: 61 GGR---------GEVKTLRNAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFF 111 Query: 113 MLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 L + + ++ EL LL ++G+GLD C +G Sbjct: 112 DYLQCLQALAAEDISPEQALRQFELALLNHLGYGLDFLHCAGSGQ 156 >gi|332975859|gb|EGK12737.1| recombination protein O [Desmospora sp. 8437] Length = 250 Score = 96.7 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 19/198 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVR 55 M + + +++ R YGE + ++ + T+ +G++ R + R+ + Q G + Sbjct: 1 MLEKLEGVVIRTRDYGESHKVVILFTKAHGKYAVMARGAKKPKSRLAAVTQPFTSGEYLC 60 Query: 56 VNWRSRLAQNLGEFRF---EVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLEL 110 G ++LES LL S L Y L + E+EP L + Sbjct: 61 FTGS-------GMATLSQGDILESR--HLLRSDLVRASYAAYWTELLDKLKEEKEPDLPV 111 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 Y L LN + + EL +L++ G+ L CV G + S + GG Sbjct: 112 YIWLETVLNLLEEGVDPEILSRIFELKVLESAGYRPRLQGCVQCGGADTPVKFSIRQGGF 171 Query: 171 VCRSVGLPYAEKMLVLPS 188 +C E + + P+ Sbjct: 172 LCSGCSHRDPEALFLSPA 189 >gi|73541937|ref|YP_296457.1| DNA repair protein RecO [Ralstonia eutropha JMP134] gi|119361473|sp|Q46Z20|RECO_RALEJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|72119350|gb|AAZ61613.1| DNA replication and repair protein RecO [Ralstonia eutropha JMP134] Length = 291 Score = 96.7 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 5/154 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++IL+V TR +GR + + ++P+LQ + + ++W R Sbjct: 61 PGFVLHAWPYRETSLILDVFTRDHGRLSMVAKGAKRPHSALRPVLQHFHPISLSWSGR-G 119 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + R E + + L + L + L RF P + L+ L Sbjct: 120 EVKTLTRAEWVGGMPPLAGDALLSAFYLNEL--LMRFCPREDGHPALFRHYMATLTRLAH 177 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 G + E +LL+ GF + +C+ TG Sbjct: 178 GEAAGLVLRSFERVLLQETGFAVAFDQCLSTGER 211 >gi|134095251|ref|YP_001100326.1| DNA repair protein RecO [Herminiimonas arsenicoxydans] gi|133739154|emb|CAL62203.1| DNA repair protein recO (Recombination protein O) [Herminiimonas arsenicoxydans] Length = 284 Score = 96.7 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 86/246 (34%), Gaps = 29/246 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V TR +GR + + +++ +LQ + V+W + Sbjct: 56 PGFVLHSYPYKETSLIVDVFTRDHGRIALVAKGAKRPHSKLRGVLQTFQPLSVSWSGK-- 113 Query: 64 QNLGEFRFEVLESHCAKL------LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 EV A+ L S L G L + L + L++ Sbjct: 114 -------AEVRTLTSAEWVGGLLPLEKSALLCGFYLNELLVKLLARDDSHPALFNHYVSA 166 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLW-VSPKSGGAVCRS 174 LN + + E LLK G D C T + + + V P+ G R Sbjct: 167 LNQLAHDEPAAIVLRKFERALLKESGVSGDWKICTATRNPLLGGINYVVDPERGPRPARP 226 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKS-AFQLTDYFLNKYALQHNIIHCHLLRENFL 233 + P K ++ + A Q+ FL ++ L H++ L L Sbjct: 227 A-DTW-------PHVAGKTLLDMEKEDYSDAATQMQSKFLMRFLLAHHLNGAPLNTRQIL 278 Query: 234 GKLLEL 239 LL+L Sbjct: 279 IDLLQL 284 >gi|113868515|ref|YP_727004.1| DNA repair protein RecO [Ralstonia eutropha H16] gi|113527291|emb|CAJ93636.1| combinational DNA repair protein (RecF pathway) [Ralstonia eutropha H16] Length = 297 Score = 96.7 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 7/162 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++IL++ TR YGR + + ++ +LQ + V V+W R Sbjct: 67 PGFVLHAWPYRETSLILDLFTRDYGRISMVAKGAKRPHSALRAVLQHFHPVSVSWSGR-G 125 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + E + + L + L + L RF P + L+ L Sbjct: 126 EVKTLTKAEWVGGMPPLAGDALLSAFYLNEL--LMRFCPREDAHPALFRHYLTTLTRLAH 183 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWV 163 G + E +LL+ GF + +C+ TG L +V Sbjct: 184 GEQAGLVLRSFERVLLQETGFAVAFDQCLSTGERVQPGLDYV 225 >gi|194290150|ref|YP_002006057.1| DNA repair protein reco [Cupriavidus taiwanensis LMG 19424] gi|193223985|emb|CAQ69994.1| DNA repair protein [Cupriavidus taiwanensis LMG 19424] Length = 295 Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 7/162 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++IL+V TR YGR + + ++ +LQ + V V+W R Sbjct: 65 PGFVLHAWPYRETSLILDVFTRDYGRLSMVAKGAKRPHSALRAVLQHFHPVSVSWSGR-G 123 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + E + + L + L + L RF P + L+ L Sbjct: 124 EVKTLTKAEWVGGMPPLAGDALLSAFYLNEL--LMRFCPREDAHPVLFRHYLSTLTRLAH 181 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWV 163 G + E +LL+ GF + +C+ TG L +V Sbjct: 182 GEPAGLVLRSFERVLLQETGFAVAFDQCLSTGERVQAGLDYV 223 >gi|163802960|ref|ZP_02196847.1| DNA repair protein RecO [Vibrio sp. AND4] gi|159173250|gb|EDP58078.1| DNA repair protein RecO [Vibrio sp. AND4] Length = 243 Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W + + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARSKRSNLKGALQPFTPLLLKWSGKSS-- 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 + A+ +S L L+G+ ++ R L P L+ L Sbjct: 71 -------MKTLRQAEAISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALT 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G+D C TG Sbjct: 124 ELAQNDNPEPALRRFELALLSSLGYGVDFLHCAGTGE 160 >gi|300724128|ref|YP_003713445.1| gap repair protein [Xenorhabdus nematophila ATCC 19061] gi|297630662|emb|CBJ91327.1| gap repair protein, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Xenorhabdus nematophila ATCC 19061] Length = 245 Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 21/171 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + +S R ++ LQ + + W Sbjct: 4 WQ-RAFVLHGRPYSETSLLLDFFTENEGRVRVLAKGVRSRRSHLKGCLQPFTPLLIRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLELYDML 114 R E+ A+ +S +L L GL L R L + L+ Sbjct: 63 R---------GEIKTLRDAEPISLALPLAGSVLYSGLYVNELLSRVLEQGTAYPALFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + + EL LL +IG+G+D C +G VT + + Sbjct: 114 LQCLQALAASDRTPEYALRRFELALLTSIGYGVDYLHCAGSGESVTDTMTY 164 >gi|317049178|ref|YP_004116826.1| DNA repair protein RecO [Pantoea sp. At-9b] gi|316950795|gb|ADU70270.1| DNA repair protein RecO [Pantoea sp. At-9b] Length = 242 Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPYSETSLLLDLFSESEGRVRVLAKGARSRRSQLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 W R EV A+ +S +L L G+ L+ R L + P +L+ Sbjct: 60 WGGR---------GEVKTLRNAEAVSLALPLSGITLYCGLYVNELLSRVLEQEIPFSDLF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + S + + EL LL ++G+G+D C +G D Sbjct: 111 FDYLNCIQALAAASGTPEPALRRFELALLGHLGYGVDFLHCAGSGEEVD 159 >gi|297529348|ref|YP_003670623.1| DNA repair protein RecO [Geobacillus sp. C56-T3] gi|297252600|gb|ADI26046.1| DNA repair protein RecO [Geobacillus sp. C56-T3] Length = 262 Score = 94.8 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 10/187 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVRVNWRS 60 +AI++ YGE N I+ + TR++G+ R + S R+ + Q G+ V R Sbjct: 6 EAIVMRTVDYGETNKIVTLFTREWGKVAAMARGAKKPSSRLSAVTQPLSYGHYVIRRSRG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + G E+++S A Y + + + E++ L+++L L Sbjct: 66 VGVLHQG----ELIDSMRALREDLFAAAYAVYIVELTDKSTEEQKRNPYLFELLLQTLQY 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E +L +G L +C G T+ S K G +C Sbjct: 122 MSEGRDLEILTFIYETKMLAVLGIPPVLDRCARCGATEGRFSFSVKEAGFLCHRCEASDP 181 Query: 181 EKMLVLP 187 + L Sbjct: 182 HR-FPLS 187 >gi|288555747|ref|YP_003427682.1| DNA repair protein RecO [Bacillus pseudofirmus OF4] gi|288546907|gb|ADC50790.1| DNA repair protein RecO [Bacillus pseudofirmus OF4] Length = 251 Score = 94.4 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 6/178 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + +AI++ YGE N I+ + TR+ G+ R + R+ I Q + Sbjct: 1 MQ-KVEAIVIRTNDYGESNKIVTLFTRESGKVGVMARGAKKPKSRLAAISQLFIHGLYLF 59 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + E++ S+ L Y + + + E++P L+ +L Sbjct: 60 QK--SNGLGTLNQAEMIHSYKEVRNDLFLASYATYVVELIDKLTEEKQPNEPLFHLLQQT 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + E+ +++ G +L +C G T+ S K G +C+ Sbjct: 118 LLYLDEGIDPEVLLRIFEMKMMQVAGITPELDQCTNCGSTEVPSGFSIKEAGFLCKKC 175 >gi|297617860|ref|YP_003703019.1| DNA repair protein RecO [Syntrophothermus lipocalidus DSM 12680] gi|297145697|gb|ADI02454.1| DNA repair protein RecO [Syntrophothermus lipocalidus DSM 12680] Length = 250 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 98/255 (38%), Gaps = 37/255 (14%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA----------GNL 53 +AI+L + + E + I+ R+ G+ + + ++ +Q G Sbjct: 8 EAIVLKNQDFIETDKIVTFFARREGKLRAVAKGIKKPNSSLRGAVQPFCFSCLHLSRGRE 67 Query: 54 VRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + + + R+ + G R +++++ L+ L + L + L E +P E++D Sbjct: 68 LDLITQGRIIEFFGYVRDDMVKT-----------LHSLYLMELLDKSLAEADPHPEVFDA 116 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L C + EL L + +G+ L L KC++ G + ++ +S K GG +C Sbjct: 117 TLTVLRCLEDGPFSPLAVRWFELKLARELGYALGLQKCILCGRGKAVV-LSIKDGGVLCD 175 Query: 174 SVGLPYAEKM-LVLPSFLWKEEQTIDADSL---------KSAFQLTDYFLNKYA---LQH 220 + + L LW + ++ + A ++ + L ++ L H Sbjct: 176 RCNRASTDNLIFALDGELWALLRDLEQKDVSFLQRVKPSARALRVAEQILERHLEYHLGH 235 Query: 221 NIIHCHLLRENFLGK 235 ++R K Sbjct: 236 RFNTKSVIRNLLEDK 250 >gi|291618444|ref|YP_003521186.1| RecO [Pantoea ananatis LMG 20103] gi|291153474|gb|ADD78058.1| RecO [Pantoea ananatis LMG 20103] gi|327394840|dbj|BAK12262.1| DNA repair protein RecO [Pantoea ananatis AJ13355] Length = 245 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPFSETSLLLDLFSESEGRVRVLAKGARSRRSQLKGTLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 W R EV A+ +S +L L G+ L+ R L + P EL+ Sbjct: 60 WSGR---------GEVKTLRNAEAVSLALPLSGITLYCGLYVNELLSRVLEQHIPFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + EL LL ++G+G+D C +G Sbjct: 111 FDYLQCIQMLAAGEGSPEPALRRFELALLGHLGYGVDFLHCAGSGE 156 >gi|186475608|ref|YP_001857078.1| DNA repair protein RecO [Burkholderia phymatum STM815] gi|184192067|gb|ACC70032.1| DNA repair protein RecO [Burkholderia phymatum STM815] Length = 336 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 22/185 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + +NW + Sbjct: 107 PAFVLHSYPYRETSLIIDVLSRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLNWSGKS- 165 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +FL +P +L+ + Sbjct: 166 --------EMRTLTGAEWVGGMLPLTGDALLCGFYVNELLVKFLAREDPHPQLFHHYVVT 217 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWV-SPKSGGAVCRSV 175 L ++ E +LL+ G+ + L + V V D +V P+ G R Sbjct: 218 LTRLAHDEPPVQVLRSFERVLLRETGYAMSLNRTVARKAVVPDGRYVFDPERG---VREA 274 Query: 176 GLPYA 180 Y Sbjct: 275 SDEYP 279 >gi|88812351|ref|ZP_01127601.1| Recombination protein O, RecO [Nitrococcus mobilis Nb-231] gi|88790358|gb|EAR21475.1| Recombination protein O, RecO [Nitrococcus mobilis Nb-231] Length = 249 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 5/147 (3%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 + A +L R+Y E + I E+ T ++GR R +S R + +LQ + V+W++R Sbjct: 11 EPAYVLHRRAYRESSAIAELFTAEHGRLGVVARGVRSSRSRWRALLQPFTPLSVSWQARG 70 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 LG L+ + L + + G L R L +P EL+ + Sbjct: 71 D--LGTLTDVELQWR-STLPTGRRLVSGFYLNELLLRVLQREDPYPELFQCYAGAVLMLA 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLT 149 + E LL +G+GL L+ Sbjct: 128 SRGAEQPLLRCFERDLLAAMGYGLLLS 154 >gi|290476132|ref|YP_003469032.1| gap repair protein [Xenorhabdus bovienii SS-2004] gi|289175465|emb|CBJ82268.1| gap repair protein, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Xenorhabdus bovienii SS-2004] Length = 245 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + + R ++ LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLLLDFFTENEGRVRVLAKGVRRRRSHLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRF----EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R GE + E + A L+ S+ GL L R L + L+ Sbjct: 63 R-----GEIKILRDAEPISL--ALPLTGSVLYSGLYVNELLSRVLEQGAAYPALFFDYLQ 115 Query: 117 FLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + + EL LL N+G+G+D C +G Sbjct: 116 CLQILAASEYTPEYALRRFELALLTNMGYGVDYLHCAGSGE 156 >gi|253988788|ref|YP_003040144.1| DNA repair protein RecO [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780238|emb|CAQ83399.1| dna repair protein reco (recombination protein o) [Photorhabdus asymbiotica] Length = 241 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 21/171 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A IL R Y E +++L++ T GR + +S R ++ LQ + + W Sbjct: 4 WQ-RAFILHRRPYSETSLLLDLFTENEGRISVLAKGARSRRSNLKGCLQPFTPLLIRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELYDML 114 R V A +S +L L GL L R L + L+ Sbjct: 63 RGV---------VKTLRDADPISLTLPLTGSVLYSGLYVNELLSRVLEQGTAYPALFFDY 113 Query: 115 NIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + + + EL LL N+G+G+D C +G VT + + Sbjct: 114 LQCLQVLAASEYTPEHALRRFELALLANLGYGVDYLHCAGSGEPVTDTMTY 164 >gi|196248953|ref|ZP_03147653.1| DNA repair protein RecO [Geobacillus sp. G11MC16] gi|196211829|gb|EDY06588.1| DNA repair protein RecO [Geobacillus sp. G11MC16] Length = 258 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 4/185 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +AI++ YGE N I+ + TR++G+ R + S R+ + Q R Sbjct: 6 EAIVIRAIDYGETNKIVTLFTREWGKVAAMARGAKKPSSRLSAVTQPLAYGHYLIRRSRG 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L + E+++S Y + + E++ L+++L L Sbjct: 66 VGL-LHQGELIDSMRVLREDLFAAAYAAYIVELTDKSTEEQKRNPYLFELLLQTLQYMSE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E+ +L +G L +C G T+ S K G +C + Sbjct: 125 GRDLEIMTFIYEMKMLSVLGIPPVLDRCARCGATEGRFSFSVKEAGFLCHRCEAADPHR- 183 Query: 184 LVLPS 188 L Sbjct: 184 FPLSP 188 >gi|300717985|ref|YP_003742788.1| DNA repair protein [Erwinia billingiae Eb661] gi|299063821|emb|CAX60941.1| DNA repair protein [Erwinia billingiae Eb661] Length = 244 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 22/174 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + YGR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSENYGRIRVLAKGARGKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 W R EV A+ +S +L L GL L+ R L + EL+ Sbjct: 60 WGGR---------GEVKTLRGAEPISLALPLSGLTLYCGLYVNELLSRVLEQETAFTELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + + + EL +L ++G+G+D C +G V + + Sbjct: 111 FDYLYCLQALAAVTGSPEPALRRFELAMLGHLGYGVDFMHCAGSGEEVADGMTY 164 >gi|20807456|ref|NP_622627.1| recombinational DNA repair protein [Thermoanaerobacter tengcongensis MB4] gi|20515981|gb|AAM24231.1| Recombinational DNA repair protein [Thermoanaerobacter tengcongensis MB4] Length = 257 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 21/197 (10%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLV 54 M + + +AI+L EK+ I + TR YG+ + + + + + N V Sbjct: 11 MRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYV 70 Query: 55 RVNWRSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLE 109 + + E++++ + + L + L S + + R L E++ + Sbjct: 71 IF-------EGQNYYYIDQWELVKN--FENIEKDLKKFALASYISETISRVLEEKQKNTK 121 Query: 110 LYDMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 LY L + +V IF+ L L+ +G+ L C V G ++L + S G Sbjct: 122 LYFFTKHSLEAVESLNVETSIFLFSYTLKLISLLGYMPVLDSCAVCGKKENLSYFSSSCG 181 Query: 169 GAVCRSVGLPYAEKMLV 185 GAVC+ + + Sbjct: 182 GAVCKDCNETCKDAKFL 198 >gi|42559491|sp|Q8RB48|RECO_THETN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 247 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 21/197 (10%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLV 54 M + + +AI+L EK+ I + TR YG+ + + + + + N V Sbjct: 1 MRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYV 60 Query: 55 RVNWRSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLE 109 + + E++++ + + L + L S + + R L E++ + Sbjct: 61 IF-------EGQNYYYIDQWELVKN--FENIEKDLKKFALASYISETISRVLEEKQKNTK 111 Query: 110 LYDMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 LY L + +V IF+ L L+ +G+ L C V G ++L + S G Sbjct: 112 LYFFTKHSLEAVESLNVETSIFLFSYTLKLISLLGYMPVLDSCAVCGKKENLSYFSSSCG 171 Query: 169 GAVCRSVGLPYAEKMLV 185 GAVC+ + + Sbjct: 172 GAVCKDCNETCKDAKFL 188 >gi|329297707|ref|ZP_08255043.1| DNA repair protein RecO [Plautia stali symbiont] Length = 245 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + +S R Q LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPYSETSLLLDLFSESQGRVRVLAKGARSRRSQRKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 W R EV A+ +S +L L G+ L+ R L + P EL+ Sbjct: 60 WGGR---------GEVKTLRNAEAVSLALPLSGITLYCGLYVNELLSRVLEQEIPFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + + + + EL LL ++G+G++ C +G D Sbjct: 111 FDYLSCIQTLAVANGSPEPALRRFELALLGHLGYGVNFLHCAGSGEAVD 159 >gi|239827757|ref|YP_002950381.1| DNA repair protein RecO [Geobacillus sp. WCH70] gi|259563679|sp|C5D4S3|RECO_GEOSW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|239808050|gb|ACS25115.1| DNA repair protein RecO [Geobacillus sp. WCH70] Length = 263 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 7/180 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNL-VRVNWRSRL 62 +AI++ YGE N I+ TR++G+ R + S R+ + Q + RSR Sbjct: 6 EAIVIRAIDYGETNKIVTFFTREWGKVATMARGAKKPSSRLSAVTQPFTHGYYLIQRSRG 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L + ++++S Y + + E++ L+++L L Sbjct: 66 VGVL--HQGDIIDSMRTIREDIFTAAYASYIVEMTDKVTEEQQRNPYLFELLLQTLQYMN 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV--GLPYA 180 + + E+ +L +G L C V G T+ S K G +C PY Sbjct: 124 EGLDLEILACIYEMKMLSVMGIPPKLDHCAVCGRTEGKFSFSIKEAGFLCHRCEKTDPYR 183 >gi|89100472|ref|ZP_01173334.1| DNA repair protein RecO [Bacillus sp. NRRL B-14911] gi|89084815|gb|EAR63954.1| DNA repair protein RecO [Bacillus sp. NRRL B-14911] Length = 253 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 11/187 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRV-NWRSRL 62 + I+L +YGE N I+ + TR++G+ R + R+ + Q RS Sbjct: 6 EGIVLRTVNYGESNKIVTLYTREWGKVGVMARGAKKPNSRLSAVTQPFTYGYFLVQRS-- 63 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 LG + E++ S + L Y + + + E++P +++L+ LN Sbjct: 64 -SGLGLMQQGEMVSSMRSIREDIFLTAYASYIVDLTDKTVEEKKPNPFHFELLHQTLNYM 122 Query: 122 KIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL--P 178 +I V E+ +L ++G L KC V G T S + GG +C P Sbjct: 123 NEGYD-PEIMVNIYEMKMLNSLGLYPVLDKCSVCGSTDGHFSFSIREGGLICHRCLEKDP 181 Query: 179 YAEKMLV 185 Y K+ Sbjct: 182 YHYKISP 188 >gi|227356255|ref|ZP_03840644.1| recombination protein O [Proteus mirabilis ATCC 29906] gi|227163719|gb|EEI48635.1| recombination protein O [Proteus mirabilis ATCC 29906] Length = 246 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 61/166 (36%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A ++ R Y E +++L+ T GR + + R ++ LQ + + Sbjct: 1 MEGWQ-RAFVIHARPYSETSLLLDFFTENEGRVRILSKGARGRRSPLKGALQPFTPLLIR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELY 111 W R E+ A+ +S +L L GL L R L L+ Sbjct: 60 WSGR---------GEIKTLRDAEPISLALPLTGTVLYSGLYLNELLSRVLENGTSYSALF 110 Query: 112 DMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGV 156 L + + + EL LL +G+GLD C +G Sbjct: 111 FEYLSCLQILAASETTPEAALRRFELALLTQLGYGLDFLHCAGSGE 156 >gi|138896060|ref|YP_001126513.1| DNA repair protein RecO [Geobacillus thermodenitrificans NG80-2] gi|166221892|sp|A4IR14|RECO_GEOTN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|134267573|gb|ABO67768.1| DNA repair protein RecO [Geobacillus thermodenitrificans NG80-2] Length = 258 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 4/185 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +AI++ YGE N I+ + TR++G+ R + S R+ + Q R Sbjct: 6 EAIVIRAIDYGETNKIVTLFTREWGKVAAMARGAKKPSSRLSAVTQPLAYGHYLIRRSRG 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L + E+++S Y + + E++ L+++L L Sbjct: 66 VGL-LHQGELIDSMRVLREDLFAAAYAAYIVELTDKSTEEQKRNPYLFELLLQTLQYMSE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E+ +L +G L +C G T+ S K G +C + Sbjct: 125 GRDLEIMTFIYEMKMLSVLGIPPVLDRCARCGATEGRFSFSVKEAGFLCHRCESADPHR- 183 Query: 184 LVLPS 188 L Sbjct: 184 FPLSP 188 >gi|262273708|ref|ZP_06051521.1| DNA recombination and repair protein RecO [Grimontia hollisae CIP 101886] gi|262222123|gb|EEY73435.1| DNA recombination and repair protein RecO [Grimontia hollisae CIP 101886] Length = 237 Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M +L R Y E ++IL+V + +GR + + R ++ LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSENHGRVSLMAKGARGKRSPLKGALQPFTPLLMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFL-PEREPCLELY 111 R E+ A+ + ++ L G L R + PE Y Sbjct: 61 SGR---------GEMHTLRHAEAMGLAIPLSGNALFSGFYLNEILSRVVEPETAYHQLFY 111 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 D + + + + + EL LL ++G+G+D C +G Sbjct: 112 DYVTALTELAQHRNPEPAL-RRFELALLDSLGYGVDFLHCAGSGE 155 >gi|254360746|ref|ZP_04976894.1| DNA recombination protein RecO [Mannheimia haemolytica PHL213] gi|153091316|gb|EDN73290.1| DNA recombination protein RecO [Mannheimia haemolytica PHL213] Length = 240 Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 11/167 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ A +L R Y E ++++E T +GR + + R ++ +LQ + + W Sbjct: 5 QWQ-RAFVLHRREYSENSLLVEFFTEHHGRITLLAKGARRARSPLKAVLQPFTPLLLRWS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L + EL+ + Sbjct: 64 GK-GDLKTLTKAEPAALTLP--METLSLYSGFYINEVLARVLENQTAYPELFQHYLRCIT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 I I E LK +G+G+D T C TG+ V PK Sbjct: 121 ELATQKQIEPILRTFEFHTLKALGYGVDFTHCAATGLP-----VDPK 162 >gi|21958064|gb|AAM84873.1|AE013732_5 recO protein [Yersinia pestis KIM 10] gi|45437170|gb|AAS62722.1| DNA repair protein [Yersinia pestis biovar Microtus str. 91001] Length = 243 Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 7/157 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 6 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + E + A LS S+ GL L R L + L+ L Sbjct: 65 R-GEVKTLRSAEPVSL--ALPLSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQA 121 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 + ++ EL +L N+G+G+D C +G Sbjct: 122 LAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQ 158 >gi|149192069|ref|ZP_01870294.1| DNA repair protein RecO [Vibrio shilonii AK1] gi|148834094|gb|EDL51106.1| DNA repair protein RecO [Vibrio shilonii AK1] Length = 234 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W Sbjct: 8 FVLHRRPYSESSLILDVFSEEYGRVTLLSKGARSKRSNLKGALQPFTPLLLKWSGG---- 63 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L P L+ L Sbjct: 64 -GSMK----TLRQAEAISLGLPLSGINLYSAMYVNELIARVLASEIPFPALFHDYLQALT 118 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + EL LL +G+G+D C TG Sbjct: 119 ELAHNTNPEPALRRFELALLSAMGYGVDFLHCAGTGE 155 >gi|326389847|ref|ZP_08211411.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus JW 200] gi|325994115|gb|EGD52543.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus JW 200] Length = 248 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNW 58 + +AI+L GE + I + T+ YG+ + + + + + N V Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIF-- 62 Query: 59 RSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM 113 + + E++E+H K + L + + S + + + L E + LY Sbjct: 63 -----EGQNYYYIDQWELIEAH--KNIEKDLAKFSVASYIAETINKILEENQKSERLYLF 115 Query: 114 LNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L + IF+ L L+ +G+ L CVV G ++L + S GGAVC Sbjct: 116 LKHSLKAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVC 175 >gi|307266974|ref|ZP_07548491.1| DNA repair protein RecO [Thermoanaerobacter wiegelii Rt8.B1] gi|306918023|gb|EFN48280.1| DNA repair protein RecO [Thermoanaerobacter wiegelii Rt8.B1] Length = 248 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNW 58 + +AI+L GE + I + T+ YG+ + + + + + N V Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRLFVVANYVIF-- 62 Query: 59 RSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM 113 + + E++E+H K + L + + S + + + L E + LY Sbjct: 63 -----EGQNYYYIDQWELIEAH--KNIEKDLAKFSVASYIAETINKILEENQKSERLYLF 115 Query: 114 LNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L + IF+ L L+ +G+ L CVV G ++L + S GGAVC Sbjct: 116 LKHSLKAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVC 175 >gi|167039987|ref|YP_001662972.1| DNA repair protein RecO [Thermoanaerobacter sp. X514] gi|300914077|ref|ZP_07131393.1| DNA repair protein RecO [Thermoanaerobacter sp. X561] gi|307724690|ref|YP_003904441.1| DNA repair protein RecO [Thermoanaerobacter sp. X513] gi|238687639|sp|B0K710|RECO_THEPX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166854227|gb|ABY92636.1| DNA repair protein RecO [Thermoanaerobacter sp. X514] gi|300889012|gb|EFK84158.1| DNA repair protein RecO [Thermoanaerobacter sp. X561] gi|307581751|gb|ADN55150.1| DNA repair protein RecO [Thermoanaerobacter sp. X513] Length = 248 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNW 58 + +AI+L GE + I + T+ YG+ + + + + + N V Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIF-- 62 Query: 59 RSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM 113 + + E++E+H K + L + + S + + + L E + LY Sbjct: 63 -----EGQNYYYIDQWELIEAH--KNIEKDLAKFSVASYIAETINKILEENQKSERLYLF 115 Query: 114 LNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L + IF+ L L+ +G+ L CVV G ++L + S GGAVC Sbjct: 116 LKHSLKAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVC 175 >gi|330446943|ref|ZP_08310594.1| DNA repair protein RecO [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491134|dbj|GAA05091.1| DNA repair protein RecO [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 236 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 9/167 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M +L R Y E ++IL+V + +GR + + R ++ LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDHGRLTLLSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + E + + S + + L R L P +L+ Sbjct: 61 SGK--GAMPVLTHAEPI--SIGLPMRSYILYSAMYVNEILVRVLGNHTPYPQLFLDYLNV 116 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLW 162 L + EL LL ++G+G+D C + GV D+ + Sbjct: 117 LRELAQADNPEPALRRFELSLLHHLGYGIDFLHCAGSGLGVEDDMTY 163 >gi|83720218|ref|YP_442267.1| DNA repair protein RecO [Burkholderia thailandensis E264] gi|83654043|gb|ABC38106.1| DNA repair protein RecO [Burkholderia thailandensis E264] Length = 286 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 57 PGFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 115 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 116 --------ELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVT 167 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSG 168 L ++ E +LL+ G+ + L + V + L P+ G Sbjct: 168 LTRLAHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPGKLYVFDPERG 220 >gi|197285741|ref|YP_002151613.1| DNA repair protein [Proteus mirabilis HI4320] gi|238693200|sp|B4F045|RECO_PROMH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194683228|emb|CAR43909.1| DNA repair protein [Proteus mirabilis HI4320] Length = 246 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 61/166 (36%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A ++ R Y E +++L+ T GR + + R ++ LQ + + Sbjct: 1 MEGWQ-RAFVIHARPYSETSLLLDFFTENEGRVRILSKGARGRRSPLKGALQPFTPLLIR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELY 111 W R E+ A+ +S +L L GL L R L L+ Sbjct: 60 WSGR---------GEIKTLRDAEPISLALPLTGTVLYSGLYLNELLSRVLENGTSYSTLF 110 Query: 112 DMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGV 156 L + + + EL LL +G+GLD C +G Sbjct: 111 FEYLSCLQILAASETTPEAALRRFELALLTQLGYGLDFLHCAGSGE 156 >gi|51597204|ref|YP_071395.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 32953] gi|108808448|ref|YP_652364.1| DNA repair protein RecO [Yersinia pestis Antiqua] gi|108811371|ref|YP_647138.1| DNA repair protein RecO [Yersinia pestis Nepal516] gi|145598835|ref|YP_001162911.1| DNA repair protein RecO [Yersinia pestis Pestoides F] gi|149365388|ref|ZP_01887423.1| DNA repair protein [Yersinia pestis CA88-4125] gi|153948747|ref|YP_001400119.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 31758] gi|161484839|ref|NP_668622.2| DNA repair protein RecO [Yersinia pestis KIM 10] gi|161511351|ref|NP_993845.2| DNA repair protein RecO [Yersinia pestis biovar Microtus str. 91001] gi|162420369|ref|YP_001607937.1| DNA repair protein RecO [Yersinia pestis Angola] gi|165925301|ref|ZP_02221133.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. F1991016] gi|165937188|ref|ZP_02225753.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. IP275] gi|166008243|ref|ZP_02229141.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. E1979001] gi|166212406|ref|ZP_02238441.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. B42003004] gi|167399560|ref|ZP_02305084.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421237|ref|ZP_02312990.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423802|ref|ZP_02315555.1| DNA repair protein RecO [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467392|ref|ZP_02332096.1| DNA repair protein RecO [Yersinia pestis FV-1] gi|170023437|ref|YP_001719942.1| DNA repair protein RecO [Yersinia pseudotuberculosis YPIII] gi|186896301|ref|YP_001873413.1| DNA repair protein RecO [Yersinia pseudotuberculosis PB1/+] gi|218929792|ref|YP_002347667.1| DNA repair protein RecO [Yersinia pestis CO92] gi|229838283|ref|ZP_04458442.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895521|ref|ZP_04510692.1| gap repair protein [Yersinia pestis Pestoides A] gi|229898847|ref|ZP_04513992.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901621|ref|ZP_04516743.1| gap repair protein [Yersinia pestis Nepal516] gi|270489810|ref|ZP_06206884.1| DNA repair protein RecO [Yersinia pestis KIM D27] gi|294504511|ref|YP_003568573.1| DNA repair protein RecO [Yersinia pestis Z176003] gi|20139503|sp|Q8ZD70|RECO_YERPE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61214871|sp|Q667V3|RECO_YERPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361499|sp|Q1C553|RECO_YERPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361500|sp|Q1CKE2|RECO_YERPN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221917|sp|A4TKX6|RECO_YERPP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166918733|sp|A7FFU1|RECO_YERP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238687296|sp|A9R404|RECO_YERPG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238688564|sp|B1JRC9|RECO_YERPY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691450|sp|B2KA45|RECO_YERPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|51590486|emb|CAH22126.1| DNA repair protein [Yersinia pseudotuberculosis IP 32953] gi|108775019|gb|ABG17538.1| DNA replication and repair protein RecO [Yersinia pestis Nepal516] gi|108780361|gb|ABG14419.1| DNA replication and repair protein RecO [Yersinia pestis Antiqua] gi|115348403|emb|CAL21339.1| DNA repair protein [Yersinia pestis CO92] gi|145210531|gb|ABP39938.1| DNA replication and repair protein RecO [Yersinia pestis Pestoides F] gi|149291801|gb|EDM41875.1| DNA repair protein [Yersinia pestis CA88-4125] gi|152960242|gb|ABS47703.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 31758] gi|162353184|gb|ABX87132.1| DNA repair protein RecO [Yersinia pestis Angola] gi|165915051|gb|EDR33663.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. IP275] gi|165922908|gb|EDR40059.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. F1991016] gi|165992625|gb|EDR44926.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. E1979001] gi|166206337|gb|EDR50817.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. B42003004] gi|166960726|gb|EDR56747.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052064|gb|EDR63472.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057972|gb|EDR67718.1| DNA repair protein RecO [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749971|gb|ACA67489.1| DNA repair protein RecO [Yersinia pseudotuberculosis YPIII] gi|186699327|gb|ACC89956.1| DNA repair protein RecO [Yersinia pseudotuberculosis PB1/+] gi|229681550|gb|EEO77644.1| gap repair protein [Yersinia pestis Nepal516] gi|229688395|gb|EEO80466.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694649|gb|EEO84696.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701327|gb|EEO89355.1| gap repair protein [Yersinia pestis Pestoides A] gi|262362497|gb|ACY59218.1| DNA repair protein RecO [Yersinia pestis D106004] gi|262366498|gb|ACY63055.1| DNA repair protein RecO [Yersinia pestis D182038] gi|270338314|gb|EFA49091.1| DNA repair protein RecO [Yersinia pestis KIM D27] gi|294354970|gb|ADE65311.1| DNA repair protein RecO [Yersinia pestis Z176003] gi|320016073|gb|ADV99644.1| gap repair protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 241 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 7/157 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + E + A LS S+ GL L R L + L+ L Sbjct: 63 R-GEVKTLRSAEPVSL--ALPLSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQA 119 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 + ++ EL +L N+G+G+D C +G Sbjct: 120 LAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQ 156 >gi|85059763|ref|YP_455465.1| DNA repair protein RecO [Sodalis glossinidius str. 'morsitans'] gi|119361486|sp|Q2NS15|RECO_SODGM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|84780283|dbj|BAE75060.1| DNA repair protein RecO [Sodalis glossinidius str. 'morsitans'] Length = 260 Score = 92.5 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 63/163 (38%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T Q GR + +S R ++ +LQ + W Sbjct: 4 WQ-RAFVLHARPYSETSLLLDFFTEQQGRVRVLAKGARSRRSALKGVLQPFTPLLARWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI------VPLFRFLPEREPCLEL-YDM 113 R EV A+ +S L L GL L R L +L YD Sbjct: 63 R---------GEVKTLRSAEPVSLGLPLSGLMLYSGLYINELLSRVLDHETDYSKLFYDY 113 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L+ + EL LL ++G+G+D C +G Sbjct: 114 LHCLQWLAGATGSPEPALRRFELALLSHLGYGVDFLHCAGSGE 156 >gi|237748851|ref|ZP_04579331.1| DNA repair protein recO [Oxalobacter formigenes OXCC13] gi|229380213|gb|EEO30304.1| DNA repair protein recO [Oxalobacter formigenes OXCC13] Length = 265 Score = 92.5 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 17/152 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E +++++V TR YGR + + + R++ +LQ + + W + Sbjct: 37 PGFVLHSYVYKESSLVVDVFTRDYGRVALVAKGAKRPTSRLRGVLQTFQPLSIGWTGKS- 95 Query: 64 QNLGEFRFEVLESHCAKL------LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 E+ A+ L +S LYG L + +P L+D Sbjct: 96 --------ELRTLTTAEWIGGMIPLENSALLYGFYLNELLLKLTAREDPHHLLFDHYVKA 147 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 LN + EL LLK G DL+ Sbjct: 148 LNRLATSESAQTVLRIFELALLKETGVAADLS 179 >gi|261491681|ref|ZP_05988262.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494444|ref|ZP_05990930.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309828|gb|EEY11045.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312634|gb|EEY13756.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 240 Score = 92.5 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 6/156 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ A +L R Y E ++++E T +GR + + R ++ +LQ + V W Sbjct: 5 QWQ-RAFVLHRREYSESSLLVEFFTEHHGRITLLAKGARRARSPLKAVLQPFTPLLVRWS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + ++ G L R L + EL+ + Sbjct: 64 GK-GDLKTLTKAEPAALTLP--METAALYSGFYINEVLARVLENQTAYPELFQHYLRCMT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 I I E LK +G+G+D T C TG Sbjct: 121 ELATQHQIEPILRTFEFHTLKALGYGVDFTHCTATG 156 >gi|269140065|ref|YP_003296766.1| DNA repair protein [Edwardsiella tarda EIB202] gi|267985726|gb|ACY85555.1| DNA repair protein [Edwardsiella tarda EIB202] gi|304559893|gb|ADM42557.1| DNA recombination and repair protein RecO [Edwardsiella tarda FL6-60] Length = 242 Score = 92.5 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T +GR + +S R ++ LQ + + W Sbjct: 4 WQ-RAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI------VPLFRFLPEREPCLELYDML 114 R EV A+ +S +L L G+ L R L + L+ Sbjct: 63 R---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYSALFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL +G+G+D C +G Sbjct: 114 LHCIQHLAAHAGSPEPALRRFELALLTQLGYGVDFLHCAGSGE 156 >gi|167037773|ref|YP_001665351.1| DNA repair protein RecO [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256751967|ref|ZP_05492837.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus CCSD1] gi|320116188|ref|YP_004186347.1| DNA repair protein RecO [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687665|sp|B0KA52|RECO_THEP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166856607|gb|ABY95015.1| DNA repair protein RecO [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749172|gb|EEU62206.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus CCSD1] gi|319929279|gb|ADV79964.1| DNA repair protein RecO [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 248 Score = 92.5 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNW 58 + +AI+L GE + I + T+ YG+ + + + + + N V Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFIVANYVIF-- 62 Query: 59 RSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM 113 + + E++E+H + + L + + S + + + L E + LY Sbjct: 63 -----EGKNYYYIDQWELIEAH--RNIEKDLVKFSVASYIAETINKILEENQKSERLYLF 115 Query: 114 LNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L + IF+ L L+ +G+ L CVV G ++L + S GGAVC Sbjct: 116 LKHSLKAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVC 175 >gi|322834125|ref|YP_004214152.1| DNA repair protein RecO [Rahnella sp. Y9602] gi|321169326|gb|ADW75025.1| DNA repair protein RecO [Rahnella sp. Y9602] Length = 245 Score = 92.5 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 20/167 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGQGRVRILAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 W R EV A+ +S +L L GL L+ R L + L+ Sbjct: 60 WSGR---------GEVKTLRNAEPVSLALPLSGLMLYSGLYVNELVSRVLEQEANYSSLF 110 Query: 112 DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT 157 L S + ++ EL LL ++G+G+D C +G Sbjct: 111 FDYLNCLQNLASASGSPEYALRQFELSLLHHLGYGVDFLHCAGSGEE 157 >gi|82702880|ref|YP_412446.1| DNA repair protein RecO [Nitrosospira multiformis ATCC 25196] gi|119361469|sp|Q2Y867|RECO_NITMU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|82410945|gb|ABB75054.1| DNA replication and repair protein RecO [Nitrosospira multiformis ATCC 25196] Length = 242 Score = 92.5 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 17/158 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I+EV T+ GR + + + ++ +L+A + ++W + Sbjct: 12 PAFVLHSYPYLETSLIVEVFTQNSGRIAVVAKGAKRPTSPLRGLLRAFQPLLLSWGGKS- 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ H A+ L L G I L R L +P L+ Sbjct: 71 --------ELRTLHKAEWQGGQLPLQGTALICGFYLNELLIRLLHRNDPHERLFACYQEA 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L+ S I + E LL+ +G+ L L V +G Sbjct: 123 LSDLSTASDYIPILRRFEQRLLQEMGYALTLDHDVSSG 160 >gi|37527214|ref|NP_930558.1| DNA repair protein RecO [Photorhabdus luminescens subsp. laumondii TTO1] gi|42559442|sp|Q7N1X7|RECO_PHOLL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|36786648|emb|CAE15712.1| DNA repair protein recO (recombination protein O) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 241 Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E +++L++ T GR + + R ++ LQ + V W R Sbjct: 8 FVLHGRPYSETSLLLDLFTENEGRISVLAKGARGRRSNLKGCLQPFTPLLVRWSGR---- 63 Query: 66 LGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 G + A +S +L L GL L R L + L+ L Sbjct: 64 -GAIK----TLRDADPISLALPLTGSVLYSGLYINELLSRVLEQGTAYPALFFDYLQCLQ 118 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + EL LL N+G+G+D C +G Sbjct: 119 ILAASEYTPEYALRRFELALLANLGYGVDYLHCAGSGE 156 >gi|148263002|ref|YP_001229708.1| DNA repair protein RecO [Geobacter uraniireducens Rf4] gi|189039657|sp|A5GBB7|RECO_GEOUR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146396502|gb|ABQ25135.1| DNA replication and repair protein RecO [Geobacter uraniireducens Rf4] Length = 244 Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 71/177 (40%), Gaps = 8/177 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+LGV YGE + I+ + T ++G+ G R+ + R + L+ +R++ ++ Sbjct: 7 EAIVLGVMDYGEADKIVTLFTLEHGKLKGLARSAKKSRKRFGGALEPFARLRLHLAMKV- 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNCHK 122 L + + + + + L R +PE E L+ +L +L+ Sbjct: 66 -GLSTLNGADIVTIFPHIRQDLVKIGHAAYACELVERLVPEAEQNHRLFRLLAAYLDHLD 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV---SPKSGGAVCRSVG 176 E LLK +G+ L++C V SP S G +C G Sbjct: 125 QFQHDPSDRRFFEANLLKVVGYQPALSRCAACDADLAGALVLRWSPSSAGVLCGRCG 181 >gi|126652273|ref|ZP_01724452.1| DNA repair protein RecO [Bacillus sp. B14905] gi|126591005|gb|EAZ85117.1| DNA repair protein RecO [Bacillus sp. B14905] Length = 262 Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 78/222 (35%), Gaps = 9/222 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + + I+L VR+YGE N I+ ++TR+ G+ R + S R+ + Q Sbjct: 1 MLHKWEGIVLKVRAYGESNKIVTLLTREAGKVATMARGAKKPSSRLASVTQPFTYGMFMV 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +G + E L S Y + + R + E +P +D+L Sbjct: 61 Q--HHTGMGTLQQGEHLNSMRHIREDIMATAYASYIMELVERVVEEGKPEPFAFDVLLQA 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + I + E +L G L C G S GG +C Sbjct: 119 LQAIEDGYDPESITLFAEWKMLPYTGVQPILHACAACGAVDGEFAFSFAQGGFLCHRCYQ 178 Query: 178 --PYAEKMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNK 215 PY ++ L + ID + T YF+ K Sbjct: 179 HDPYIIRLTPTQLKLIRMFYTVPIDQIGKIELKKETKYFIKK 220 >gi|310764813|gb|ADP09763.1| DNA repair protein RecO [Erwinia sp. Ejp617] Length = 245 Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 20/167 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + Q+GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARSKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 W R EV A+ +S +L L G L+ R L EL Sbjct: 60 WSGR---------GEVKTLRAAEPVSLALPLSGNTLYCGLYVNELLSRVLQHETAFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 +D L P+ + EL +L ++G+G+D C +G Sbjct: 111 FDYLQCIQTLAADPASPEPALRRFELSMLGHLGYGVDFLHCAGSGEE 157 >gi|259907679|ref|YP_002648035.1| DNA repair protein RecO [Erwinia pyrifoliae Ep1/96] gi|224963301|emb|CAX54786.1| DNA repair protein RecO [Erwinia pyrifoliae Ep1/96] gi|283477530|emb|CAY73446.1| DNA repair protein recO (Recombination protein O) [Erwinia pyrifoliae DSM 12163] Length = 245 Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 20/167 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + Q+GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARSKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 W R EV A+ +S +L L G L+ R L EL Sbjct: 60 WSGR---------GEVKTLRAAEPVSLALPLSGNTLYCGLYVNELLSRVLQHETAFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 +D L P+ + EL +L ++G+G+D C +G Sbjct: 111 FDYLQCIQTLAADPASPEPALRRFELSMLGHLGYGVDFLHCAGSGEE 157 >gi|209695941|ref|YP_002263871.1| DNA repair protein RecO [Aliivibrio salmonicida LFI1238] gi|238058640|sp|B6EKM7|RECO_ALISL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|208009894|emb|CAQ80207.1| DNA repair protein RecO (recombination protein O) [Aliivibrio salmonicida LFI1238] Length = 238 Score = 92.1 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 24/168 (14%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ +LQA + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRLSIISKGARSKRSNLKGVLQAFTPLLMKWSGK---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELY-DMLNIFL 118 G R A+ +S ++ L G+ L R + + P L+ D L Sbjct: 65 -GSMR----TLRQAETISLAIPLTGINLYSALYINELVVRVIEQETPYPALFLDYLTALT 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + + EL LL ++G+G+D C +G VSP+ Sbjct: 120 ELAQTKNPEPAL-RRFELALLSSLGYGVDFLHCAGSGEM-----VSPE 161 >gi|167563524|ref|ZP_02356440.1| DNA repair protein RecO [Burkholderia oklahomensis EO147] Length = 251 Score = 92.1 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 22 PAFVLHSHPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 80 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 81 --------ELRTLTGAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPPLFTHYLVT 132 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D L+V P+ G Sbjct: 133 LTRLAHGEPPVQVLRSFERVLLRETGYAMSLKRTVARRSVEPDRLYVFDPERG 185 >gi|299535812|ref|ZP_07049133.1| DNA repair protein RecO [Lysinibacillus fusiformis ZC1] gi|298729012|gb|EFI69566.1| DNA repair protein RecO [Lysinibacillus fusiformis ZC1] Length = 261 Score = 92.1 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 81/222 (36%), Gaps = 9/222 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + + I+L VR+YGE N I+ ++TR+ G+ R + S R+ I Q Sbjct: 1 MLHKWEGIVLKVRAYGESNKIVILLTREAGKVATMARGAKKPSSRLASITQPFTYGMFMV 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +G + E L S Y + + R + E +P +D+L Sbjct: 61 Q--HHTGMGTLQQGEHLNSMRHIREDIMATAYASYIMELVERVVEEGKPEPFAFDVLLHA 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + I + +E +L G L C G S GG +C Sbjct: 119 LQAIEDGYDPEAITLFVEWKMLPYTGVQPILHACAACGAVDGEFAFSFAQGGFLCHRCYQ 178 Query: 178 --PYAEKMLVLPSFLWKEEQTIDADSLK--SAFQLTDYFLNK 215 PY ++ L + TI D + + T YF+ K Sbjct: 179 HDPYIIRLTPTQLKLIRMFYTIPIDQIGKIELKKETKYFIKK 220 >gi|76810334|ref|YP_334274.1| DNA repair protein RecO [Burkholderia pseudomallei 1710b] gi|161723199|ref|YP_109019.2| DNA repair protein RecO [Burkholderia pseudomallei K96243] gi|254191247|ref|ZP_04897751.1| DNA repair protein RecO [Burkholderia pseudomallei Pasteur 52237] gi|254195774|ref|ZP_04902200.1| DNA repair protein RecO [Burkholderia pseudomallei S13] gi|76579787|gb|ABA49262.1| DNA repair protein RecO [Burkholderia pseudomallei 1710b] gi|157938919|gb|EDO94589.1| DNA repair protein RecO [Burkholderia pseudomallei Pasteur 52237] gi|169652519|gb|EDS85212.1| DNA repair protein RecO [Burkholderia pseudomallei S13] Length = 286 Score = 92.1 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 57 PAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 115 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 116 --------ELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVT 167 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D L+V P+ G Sbjct: 168 LTRLAHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRG 220 >gi|167581153|ref|ZP_02374027.1| DNA repair protein RecO [Burkholderia thailandensis TXDOH] Length = 275 Score = 92.1 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 46 PGFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 104 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 105 --------ELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVT 156 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSG 168 L ++ E +LL+ G+ + L + V + L P+ G Sbjct: 157 LTRLAHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPGKLYVFDPERG 209 >gi|167619238|ref|ZP_02387869.1| DNA repair protein RecO [Burkholderia thailandensis Bt4] gi|257138460|ref|ZP_05586722.1| DNA repair protein RecO [Burkholderia thailandensis E264] gi|119361451|sp|Q2SXT2|RECO_BURTA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 275 Score = 92.1 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 46 PGFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 104 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 105 --------ELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVT 156 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSG 168 L ++ E +LL+ G+ + L + V + L P+ G Sbjct: 157 LTRLAHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPGKLYVFDPERG 209 >gi|226328139|ref|ZP_03803657.1| hypothetical protein PROPEN_02030 [Proteus penneri ATCC 35198] gi|225203843|gb|EEG86197.1| hypothetical protein PROPEN_02030 [Proteus penneri ATCC 35198] Length = 245 Score = 92.1 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 17/169 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A ++ R Y E +++L+ T GR + + R ++ LQ + + W Sbjct: 4 WQ-RAFVIHARPYSETSLLLDFFTENEGRVRILSKGARGRRSPLKGALQPFTPLLIRWSG 62 Query: 61 RLAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R GE + E + A L+ S+ GL L R L L+ Sbjct: 63 R-----GEIKTLRDAEPISL--ALPLTGSVLYSGLYLNELLSRVLENGTSYSVLFFEYLS 115 Query: 117 FLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + + + EL LL +G+GLD C +G V+ + + Sbjct: 116 CLQILAASETTPEAALRRFELALLTQLGYGLDFLHCAGSGEPVSDSMTY 164 >gi|46143334|ref|ZP_00135440.2| COG1381: Recombinational DNA repair protein (RecF pathway) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208027|ref|YP_001053252.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae L20] gi|166221881|sp|A3MZR1|RECO_ACTP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|126096819|gb|ABN73647.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 240 Score = 91.7 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 7/157 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + R ++ +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRVTLLAKGARRPRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L + EL+ + Sbjct: 63 GK-GDLKTLTKAEPASLTLP--MQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 P I I E +LK +G+G++ + C TG Sbjct: 120 RLATQPKQIEPILRTFEFQMLKALGYGVNFSICAATG 156 >gi|313637816|gb|EFS03157.1| DNA repair protein RecO [Listeria seeligeri FSL S4-171] Length = 255 Score = 91.7 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTSGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S +S G +C Sbjct: 118 LRDIDEGYDPQILTQIFEMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIICHRCFD 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|289434742|ref|YP_003464614.1| recombination protein O [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170986|emb|CBH27528.1| recombination protein O [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 255 Score = 91.7 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTSGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S +S G +C Sbjct: 118 LRDIDEGYDPQILTQIFEMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIICHRCFD 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|53725349|ref|YP_102341.1| DNA repair protein RecO [Burkholderia mallei ATCC 23344] gi|52428772|gb|AAU49365.1| Recombination protein O [Burkholderia mallei ATCC 23344] Length = 286 Score = 91.7 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 57 PAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 115 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 116 --------ELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVT 167 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D L+V P+ G Sbjct: 168 LTRLAHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRG 220 >gi|165975964|ref|YP_001651557.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|238687534|sp|B0BUA8|RECO_ACTPJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|165876065|gb|ABY69113.1| DNA repair protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 240 Score = 91.7 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 7/157 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + ++ +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPHSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L + EL+ + Sbjct: 63 GK-GDLKTLTKAEPASLTLP--MQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 P I I E +LK +G+G++ + C TG Sbjct: 120 RLATQPEQIEPILRTFEFQMLKALGYGVNFSICAATG 156 >gi|238753922|ref|ZP_04615282.1| DNA repair protein recO [Yersinia ruckeri ATCC 29473] gi|238707910|gb|EEQ00268.1| DNA repair protein recO [Yersinia ruckeri ATCC 29473] Length = 243 Score = 91.7 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPYSETSLMLDLFTEGEGRMRVLAKGARSRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELY 111 W R EV A+ +S +L L GL L R L L+ Sbjct: 60 WAGR---------GEVKTLRSAEPVSLALPLSGTMLYSGLYVNELLSRVLEHGTNYSALF 110 Query: 112 DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 L + ++ EL +L ++G+G+D C +G Sbjct: 111 FDYLHCLQALAATDGSPECVLRQFELAMLASLGYGVDFLHCAGSGQ 156 >gi|323490067|ref|ZP_08095288.1| DNA repair protein RecO [Planococcus donghaensis MPA1U2] gi|323396363|gb|EGA89188.1| DNA repair protein RecO [Planococcus donghaensis MPA1U2] Length = 260 Score = 91.7 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 15/172 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN- 57 M Q + I++ YGE N I+ + T++ G+ R + R+ I Q + Sbjct: 1 MQNQVEGIVIRTMPYGETNKIVTLFTKEAGKITCMARGAKKPASRLAAITQVFTHGSFSI 60 Query: 58 WRSRLAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYD 112 ++ + +G + E L ++S++ Y + L L E+ EP ++D Sbjct: 61 YKGK---GMGTIQAGDPLESLRHIREDIMSTAYASY----VTELIDRLTEQDEPQPAIFD 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 ML L+ I + +E +L+ G L +C G T+ S Sbjct: 114 MLYQALHAIDDGYDPEAITLFVEWKMLQTAGLTPTLHQCANCGSTEGEFAFS 165 >gi|94311352|ref|YP_584562.1| DNA repair protein RecO [Cupriavidus metallidurans CH34] gi|119361474|sp|Q1LKN3|RECO_RALME RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|93355204|gb|ABF09293.1| DNA repair protein recO (Recombination protein O) [Cupriavidus metallidurans CH34] Length = 298 Score = 91.7 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 7/164 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 + +L Y E +++L+V TR +GR + + ++ +LQ + + ++W R Sbjct: 66 NEAGFVLHAHPYRETSLVLDVFTRDHGRVAMVAKGAKRPHSALRAVLQHFHPIALSWTGR 125 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + E + LS L G L RF P + L+ L Sbjct: 126 -GEVKTLTKAEYVGGMLP--LSGDALLSGFYLNELLLRFCPREDAHPTLFRHYMATLTRL 182 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWV 163 + E +LL+ GF + +C+ +G L +V Sbjct: 183 SHGEPASFVLRSFERVLLQETGFAVAFDQCLRSGERVQPGLDYV 226 >gi|116872891|ref|YP_849672.1| DNA repair protein RecO [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461072|sp|A0AIR1|RECO_LISW6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116741769|emb|CAK20893.1| recombination protein O [Listeria welshimeri serovar 6b str. SLCC5334] Length = 255 Score = 91.7 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S +S G +C Sbjct: 118 LRDIDEGYDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFE 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|238920903|ref|YP_002934418.1| DNA repair protein RecO, [Edwardsiella ictaluri 93-146] gi|238870472|gb|ACR70183.1| DNA repair protein RecO, putative [Edwardsiella ictaluri 93-146] Length = 242 Score = 91.7 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T +GR + +S R ++ LQ + + W Sbjct: 4 WQ-RAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI------VPLFRFLPEREPCLELYDML 114 R EV A+ +S +L L G+ L R L + L+ Sbjct: 63 R---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYNALFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL +G+G+D C +G Sbjct: 114 LHCIQHLAAHAGSPEPALRRFELALLAQLGYGVDFLHCAGSGE 156 >gi|190149856|ref|YP_001968381.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263179|ref|ZP_07544800.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692329|sp|B3GX87|RECO_ACTP7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189914987|gb|ACE61239.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871541|gb|EFN03264.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 240 Score = 91.7 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 7/157 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + R ++ +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L + EL+ + Sbjct: 63 GK-GDLKTLTKAEPASLTLP--MQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 P I I E +LK +G+G++ + C TG Sbjct: 120 RLATQPEQIEPILRTFEFQMLKALGYGVNFSICAATG 156 >gi|169829165|ref|YP_001699323.1| DNA repair protein RecO [Lysinibacillus sphaericus C3-41] gi|168993653|gb|ACA41193.1| DNA repair protein recO (Recombination protein O) [Lysinibacillus sphaericus C3-41] Length = 272 Score = 91.7 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 78/222 (35%), Gaps = 9/222 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + + I+L VR+YGE N I+ ++TR+ G+ R + S R+ + Q Sbjct: 11 MLHKWEGIVLKVRAYGESNKIVTLLTREAGKVATMARGAKKPSSRLASVTQPFTYGMFMV 70 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +G + E L S Y + + R + E +P +D+L Sbjct: 71 Q--HHTGMGTLQQGEHLNSMRHIREDIMATAYASYIMELVERVVEEGKPEPFAFDVLLQA 128 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + I + E +L G L C G S GG +C Sbjct: 129 LQAIEDGYDPESITLFAEWKMLPYTGVQPILHACAACGAVDGEFAFSFAQGGFLCHRCYQ 188 Query: 178 --PYAEKMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNK 215 PY ++ L + ID + T YF+ K Sbjct: 189 HDPYIIRLTPTQLKLIRMFYTVPIDQIGKIELKKETKYFIKK 230 >gi|261820521|ref|YP_003258627.1| DNA repair protein RecO [Pectobacterium wasabiae WPP163] gi|261604534|gb|ACX87020.1| DNA repair protein RecO [Pectobacterium wasabiae WPP163] Length = 245 Score = 91.7 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 62/161 (38%), Gaps = 8/161 (4%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A L+ S+ GL L R L L+ Sbjct: 60 WSGR-GEVKTLRSAEPVSL--ALPLTGSMLYSGLYVNELLSRVLEHETNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVT 157 L + + EL LL +G+G+D C +G + Sbjct: 117 LQHLAAQDASPEPALRRFELALLSYLGYGVDFLHCAGSGES 157 >gi|167570685|ref|ZP_02363559.1| DNA repair protein RecO [Burkholderia oklahomensis C6786] Length = 248 Score = 91.7 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 19 PAFVLHSHPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 77 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 78 --------ELRTLTGAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPPLFTHYLVT 129 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D L+V P+ G Sbjct: 130 LTRLAHGEPPVQVLRSFERVLLRETGYAMSLKRTVARRSVEPDRLYVFDPERG 182 >gi|39995684|ref|NP_951635.1| DNA repair protein RecO [Geobacter sulfurreducens PCA] gi|61215122|sp|Q74FM9|RECO_GEOSL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|39982447|gb|AAR33908.1| DNA repair protein RecO [Geobacter sulfurreducens PCA] gi|298504695|gb|ADI83418.1| DNA repair protein RecO [Geobacter sulfurreducens KN400] Length = 243 Score = 91.7 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 5/155 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 +A++L Y E + I+ + T +G+ G R + R L+ + V R Sbjct: 7 EAVVLATMDYRESDRIVTLFTLCHGKVRGLARGARKSMRRFGGALEPFARLSVELVVR-- 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + L R + + ++ + +G ++ + R LP+ L+ +L +L Sbjct: 65 EGLSSLRGVDIVTVYPRIRQDLAAIGHGGYAVELVDRLLPDGASVPRLFRLLVSYLEHLD 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 E LL +G+ L L C GV Sbjct: 125 QGGASPSDRRFFEANLLNILGYRLSLDACAACGVE 159 >gi|50122198|ref|YP_051365.1| DNA repair protein RecO [Pectobacterium atrosepticum SCRI1043] gi|61214937|sp|Q6D221|RECO_ERWCT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49612724|emb|CAG76174.1| DNA repair protein [Pectobacterium atrosepticum SCRI1043] Length = 245 Score = 91.7 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 8/160 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A L+ S+ GL L R L L+ Sbjct: 60 WSGR-GEVKTLRSAEPVSL--ALPLTGSMLYSGLYVNELLARVLEHETNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + + EL LL +G+G+D C +G Sbjct: 117 LQHLAAQDASPEPALRRFELALLGYLGYGVDFLHCAGSGE 156 >gi|293394831|ref|ZP_06639121.1| recombination protein O [Serratia odorifera DSM 4582] gi|291422582|gb|EFE95821.1| recombination protein O [Serratia odorifera DSM 4582] Length = 243 Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T +GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELY 111 W R + A+ +S L L GL L R L + L+ Sbjct: 60 WGGRGD---------IKTLRNAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEADYSLLF 110 Query: 112 DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 L + ++ EL LL ++G+G+D C +G Sbjct: 111 FDYLQCLQALAAAERSPEQALRQFELALLHHLGYGVDFLHCAGSGE 156 >gi|303252177|ref|ZP_07338345.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247517|ref|ZP_07529562.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648960|gb|EFL79148.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856020|gb|EFM88178.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 240 Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 7/157 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + R ++ +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L + EL+ + Sbjct: 63 GK-GDLKTLTKAEPASLTLP--MQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 P I I E +LK +G+G++ + C TG Sbjct: 120 RLATQPKQIEPILRTFEFQMLKALGYGVNFSICAATG 156 >gi|313633230|gb|EFS00100.1| DNA repair protein RecO [Listeria seeligeri FSL N1-067] Length = 255 Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTSGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIENFPSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S +S G +C Sbjct: 118 LRDIDEGYDPQILTQIFEMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIICHRCFD 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|303251582|ref|ZP_07337756.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245402|ref|ZP_07527490.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249748|ref|ZP_07531727.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252105|ref|ZP_07534004.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254357|ref|ZP_07536195.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256564|ref|ZP_07538345.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258815|ref|ZP_07540547.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|302649580|gb|EFL79762.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853743|gb|EFM85960.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858256|gb|EFM90333.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860405|gb|EFM92419.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862656|gb|EFM94612.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864974|gb|EFM96876.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867166|gb|EFM99022.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 240 Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 7/157 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + R ++ +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L + EL+ + Sbjct: 63 GK-GDLKTLTKAEPASLTLP--MQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 P I I E +LK +G+G++ + C TG Sbjct: 120 RLATQPKQIEPILRTFEFQMLKALGYGVNFSICAATG 156 >gi|153835469|ref|ZP_01988136.1| DNA repair protein RecO [Vibrio harveyi HY01] gi|269960403|ref|ZP_06174776.1| DNA repair protein recO [Vibrio harveyi 1DA3] gi|148867980|gb|EDL67177.1| DNA repair protein RecO [Vibrio harveyi HY01] gi|269834830|gb|EEZ88916.1| DNA repair protein recO [Vibrio harveyi 1DA3] Length = 243 Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGK---- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L+G+ ++ R L P L+ L Sbjct: 69 -GSMK----TLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALT 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G+D C TG Sbjct: 124 ELAQSDNPEPGLRRFELALLSSMGYGVDFLHCAGTGE 160 >gi|332308047|ref|YP_004435898.1| DNA repair protein RecO [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175376|gb|AEE24630.1| DNA repair protein RecO [Glaciecola agarilytica 4H-3-7+YE-5] Length = 240 Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 7/153 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 +L R+Y E + ++ T + G+ V+ + + + +LQ + V R Sbjct: 8 GFVLHRRAYRETSFLINFFTMENGKVSAIVKGARGAKSDKKSLLQPFQPLLVAVSGRFE- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + +ES A L S LY L L R L + P E++ + L+ Sbjct: 67 ---LKNLQQVESTGAMLRLSGQALYCALYLNEVLNRVLADDIPHPEIFVLYQQSLHALVD 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + I EL LL +G+G+DLT TG Sbjct: 124 STHFEPILRSFELGLLDALGYGIDLTHDADTGQ 156 >gi|317491020|ref|ZP_07949456.1| recombination protein O [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920567|gb|EFV41890.1| recombination protein O [Enterobacteriaceae bacterium 9_2_54FAA] Length = 242 Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 22/174 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T +GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFTEGHGRVRLLAKGARSKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 W + EV A+ +S L L G+ L+ R L + L+ Sbjct: 60 WGGK---------GEVKTLRNAEPVSLGLPLTGISLYSGLYVNELVSRVLEQETNYSSLF 110 Query: 112 DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + ++ EL LL N+G+G+D C +G V+ D+ + Sbjct: 111 FDYLNCLQNLAATVGSPEHTLREFELALLGNLGYGIDFLHCAGSGEPVSDDMTY 164 >gi|269101848|ref|ZP_06154545.1| DNA recombination and repair protein RecO [Photobacterium damselae subsp. damselae CIP 102761] gi|268161746|gb|EEZ40242.1| DNA recombination and repair protein RecO [Photobacterium damselae subsp. damselae CIP 102761] Length = 236 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 7/166 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M +L R Y E ++IL+V + GR + + R ++ LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDSGRLSILSKGARRKRSNLKGALQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + E + + S + + L R L + P L+ L Sbjct: 61 SGK-GSMPVLTHAEPI--SIGLPMRSYILYSAMYVNEVLCRVLEAQTPYPVLFLDYLNVL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 + EL LL+++G+G+D C +G V ++ + Sbjct: 118 RELAQADNPEPALRRFELALLQHLGYGIDFLHCAGSGLPVEDNMTY 163 >gi|59712692|ref|YP_205468.1| DNA repair protein RecO [Vibrio fischeri ES114] gi|197335983|ref|YP_002156884.1| DNA repair protein RecO [Vibrio fischeri MJ11] gi|67461219|sp|Q5E316|RECO_VIBF1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238690260|sp|B5FAG8|RECO_VIBFM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|59480793|gb|AAW86580.1| gap repair protein [Vibrio fischeri ES114] gi|197317473|gb|ACH66920.1| DNA repair protein RecO [Vibrio fischeri MJ11] Length = 238 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 24/168 (14%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ +LQA + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRLSIISKGARSKRSNLKGVLQAFTPLLMKWSGK---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELY-DMLNIFL 118 G R A+ +S + L G+ L R + + P L+ D L Sbjct: 65 -GSMR----TLRQAETISLGIPLTGINLYSAMYINELLVRVVEQETPYPALFLDYLTALT 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + + EL LL +G+G+D C +G VSP+ Sbjct: 120 ELAQSTNPEPAL-RRFELALLSAMGYGVDFLHCAGSGEM-----VSPE 161 >gi|126440516|ref|YP_001059798.1| DNA repair protein RecO [Burkholderia pseudomallei 668] gi|126452734|ref|YP_001067085.1| DNA repair protein RecO [Burkholderia pseudomallei 1106a] gi|134277090|ref|ZP_01763805.1| DNA repair protein RecO [Burkholderia pseudomallei 305] gi|167720556|ref|ZP_02403792.1| DNA repair protein RecO [Burkholderia pseudomallei DM98] gi|167816750|ref|ZP_02448430.1| DNA repair protein RecO [Burkholderia pseudomallei 91] gi|167825157|ref|ZP_02456628.1| DNA repair protein RecO [Burkholderia pseudomallei 9] gi|167846654|ref|ZP_02472162.1| DNA repair protein RecO [Burkholderia pseudomallei B7210] gi|167895242|ref|ZP_02482644.1| DNA repair protein RecO [Burkholderia pseudomallei 7894] gi|167903625|ref|ZP_02490830.1| DNA repair protein RecO [Burkholderia pseudomallei NCTC 13177] gi|167911874|ref|ZP_02498965.1| DNA repair protein RecO [Burkholderia pseudomallei 112] gi|167919871|ref|ZP_02506962.1| DNA repair protein RecO [Burkholderia pseudomallei BCC215] gi|217421115|ref|ZP_03452620.1| DNA repair protein RecO [Burkholderia pseudomallei 576] gi|226199969|ref|ZP_03795519.1| DNA repair protein RecO [Burkholderia pseudomallei Pakistan 9] gi|237813193|ref|YP_002897644.1| DNA repair protein RecO [Burkholderia pseudomallei MSHR346] gi|242316189|ref|ZP_04815205.1| DNA repair protein RecO [Burkholderia pseudomallei 1106b] gi|254184212|ref|ZP_04890802.1| DNA repair protein RecO [Burkholderia pseudomallei 1655] gi|254258139|ref|ZP_04949193.1| DNA repair protein RecO [Burkholderia pseudomallei 1710a] gi|254296873|ref|ZP_04964326.1| DNA repair protein RecO [Burkholderia pseudomallei 406e] gi|61214848|sp|Q63S98|RECO_BURPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361449|sp|Q3JQ79|RECO_BURP1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52210447|emb|CAH36430.1| DNA repair protein RecO [Burkholderia pseudomallei K96243] gi|126220009|gb|ABN83515.1| DNA repair protein RecO [Burkholderia pseudomallei 668] gi|126226376|gb|ABN89916.1| DNA repair protein RecO [Burkholderia pseudomallei 1106a] gi|134250740|gb|EBA50819.1| DNA repair protein RecO [Burkholderia pseudomallei 305] gi|157807319|gb|EDO84489.1| DNA repair protein RecO [Burkholderia pseudomallei 406e] gi|184214743|gb|EDU11786.1| DNA repair protein RecO [Burkholderia pseudomallei 1655] gi|217396527|gb|EEC36544.1| DNA repair protein RecO [Burkholderia pseudomallei 576] gi|225928025|gb|EEH24062.1| DNA repair protein RecO [Burkholderia pseudomallei Pakistan 9] gi|237503117|gb|ACQ95435.1| DNA repair protein RecO [Burkholderia pseudomallei MSHR346] gi|242139428|gb|EES25830.1| DNA repair protein RecO [Burkholderia pseudomallei 1106b] gi|254216828|gb|EET06212.1| DNA repair protein RecO [Burkholderia pseudomallei 1710a] Length = 275 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 46 PAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 104 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 105 --------ELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVT 156 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D L+V P+ G Sbjct: 157 LTRLAHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRG 209 >gi|90412088|ref|ZP_01220095.1| DNA repair protein RecO [Photobacterium profundum 3TCK] gi|90327066|gb|EAS43445.1| DNA repair protein RecO [Photobacterium profundum 3TCK] Length = 236 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 16/168 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M +L R Y E ++IL+V + YGR + + R ++ LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDYGRLTILSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DM 113 R G + E + + + L R L P L+ D Sbjct: 61 TGR-----GSMKTLTHAEPISISLP--MRGYILYSAFYLNEVLARVLENDTPYPVLFMDY 113 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDL 160 LN + + + + EL LL ++G+G+D C +G+ DL Sbjct: 114 LNALRELVQADNPEPAL-RRFELALLHHLGYGIDFLHCAGSGLPVDDL 160 >gi|260771273|ref|ZP_05880200.1| DNA recombination and repair protein RecO [Vibrio furnissii CIP 102972] gi|260613870|gb|EEX39062.1| DNA recombination and repair protein RecO [Vibrio furnissii CIP 102972] gi|315179120|gb|ADT86034.1| DNA repair protein RecO [Vibrio furnissii NCTC 11218] Length = 241 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 17/162 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W + Sbjct: 9 FVLHRRPYSETSLILDVFSEEYGRLTLLAKGARSKRSNLKGALQPFTPLLLKWSGNSS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 + A+ +S L L G+ ++ R L P L+ L Sbjct: 67 -------MKTLRQAEAISLGLPLTGIHLYSAMYVNELVGRVLAPEVPSPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + EL LL ++G+G+D C TG D Sbjct: 120 ELAQSDNPEPPLRRFELALLSSLGYGVDFLHCAGTGEPVDPA 161 >gi|167586635|ref|ZP_02379023.1| DNA repair protein RecO [Burkholderia ubonensis Bu] Length = 255 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 26 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 84 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L++ + Sbjct: 85 --------EMRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPQPPLFNHYVVT 136 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D L+V P+ G Sbjct: 137 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEADRLYVFDPERG 189 >gi|296158232|ref|ZP_06841064.1| DNA repair protein RecO [Burkholderia sp. Ch1-1] gi|295891568|gb|EFG71354.1| DNA repair protein RecO [Burkholderia sp. Ch1-1] Length = 306 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 85/244 (34%), Gaps = 33/244 (13%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + ++W + Sbjct: 77 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKS- 135 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P +L+ + Sbjct: 136 --------EVRTLTAAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVT 187 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSG-GAVCRS 174 + ++ E +LL+ G+ + L + V + P+ G Sbjct: 188 MTRLAHDEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLAEGRYVFDPERGVREASDD 247 Query: 175 VGLPYA----EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 + + + +L +++ A ++ + L + LN Y R+ Sbjct: 248 LPAQWPVIAGQTLL-----DMEQDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQ 298 Query: 231 NFLG 234 + Sbjct: 299 ILID 302 >gi|67641138|ref|ZP_00439923.1| DNA repair protein RecO [Burkholderia mallei GB8 horse 4] gi|121600755|ref|YP_993768.1| DNA repair protein RecO [Burkholderia mallei SAVP1] gi|124384477|ref|YP_001028766.1| DNA repair protein RecO [Burkholderia mallei NCTC 10229] gi|126448568|ref|YP_001081326.1| DNA repair protein RecO [Burkholderia mallei NCTC 10247] gi|167000781|ref|ZP_02266588.1| DNA repair protein RecO [Burkholderia mallei PRL-20] gi|254178235|ref|ZP_04884890.1| DNA repair protein RecO [Burkholderia mallei ATCC 10399] gi|254199234|ref|ZP_04905600.1| DNA repair protein RecO [Burkholderia mallei FMH] gi|254205541|ref|ZP_04911893.1| DNA repair protein RecO [Burkholderia mallei JHU] gi|254357708|ref|ZP_04973981.1| DNA repair protein RecO [Burkholderia mallei 2002721280] gi|61214835|sp|Q62LS7|RECO_BURMA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|121229565|gb|ABM52083.1| DNA repair protein RecO [Burkholderia mallei SAVP1] gi|124292497|gb|ABN01766.1| DNA repair protein RecO [Burkholderia mallei NCTC 10229] gi|126241438|gb|ABO04531.1| DNA repair protein RecO [Burkholderia mallei NCTC 10247] gi|147748830|gb|EDK55904.1| DNA repair protein RecO [Burkholderia mallei FMH] gi|147752984|gb|EDK60049.1| DNA repair protein RecO [Burkholderia mallei JHU] gi|148026835|gb|EDK84856.1| DNA repair protein RecO [Burkholderia mallei 2002721280] gi|160699274|gb|EDP89244.1| DNA repair protein RecO [Burkholderia mallei ATCC 10399] gi|238522003|gb|EEP85450.1| DNA repair protein RecO [Burkholderia mallei GB8 horse 4] gi|243063331|gb|EES45517.1| DNA repair protein RecO [Burkholderia mallei PRL-20] Length = 275 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 46 PAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 104 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 105 --------ELRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVT 156 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D L+V P+ G Sbjct: 157 LTRLAHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRG 209 >gi|253689438|ref|YP_003018628.1| DNA repair protein RecO [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756016|gb|ACT14092.1| DNA repair protein RecO [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 245 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 8/160 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A L+ S+ GL L R L L+ Sbjct: 60 WSGR-GEVKTLRSAEPVSL--ALPLTGSMLYSGLYVNELLSRVLEHETNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + + EL LL +G+G+D C +G Sbjct: 117 LQHLAAQDASPEPALRRFELALLGYLGYGVDFLHCAGSGE 156 >gi|167837345|ref|ZP_02464228.1| DNA repair protein RecO [Burkholderia thailandensis MSMB43] Length = 237 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 21/180 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E +++++V+TR +GR + + ++ +LQ + ++W + Sbjct: 8 PGFVLHSYPYRETSLVVDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 67 --------ELRTLTGAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPPLFQHYLVT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSV 175 L ++ E +LL+ G+ + L + V + L P+ VC + Sbjct: 119 LTRLAHGEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPGRLYVFDPQ--RGVCDAG 176 >gi|90580327|ref|ZP_01236134.1| DNA repair protein RecO [Vibrio angustum S14] gi|90438629|gb|EAS63813.1| DNA repair protein RecO [Vibrio angustum S14] Length = 236 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 17/171 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M +L R Y E ++IL+V + +GR + + R ++ LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDHGRLTLLSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSI----VPLFRFLPEREPCLELYDM 113 + + E + + L Y L S L R L P +L+ Sbjct: 61 SGK--GAMPVLTHAEPIS------IGLPLRSYILYSAMYVNEILVRVLGNHTPYPQLFLD 112 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + EL LL ++G+G+D C +G V D+ + Sbjct: 113 YLNVLRELAQADNPEPALRRFELSLLHHLGYGIDFLHCAGSGLSVEDDMTY 163 >gi|167463436|ref|ZP_02328525.1| DNA repair protein RecO [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383676|ref|ZP_08057427.1| RecO-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151888|gb|EFX44831.1| RecO-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 250 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 68/192 (35%), Gaps = 20/192 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-----PILQAGNLVR 55 M ++ + IIL YGE N I+ V+T+ G+ R + + + +L G V Sbjct: 1 MLYRIEGIILRTVDYGEGNKIITVLTQA-GKVGLMARGAKKVKSRLSAVTQLLIYGEFVF 59 Query: 56 VNWRSRLAQNLGEFR----FEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLEL 110 +G E +L L Y + + + LPE E + L Sbjct: 60 FKQSG-----MGTLNHADIIEPYH----RLREDIYLSAYASYLVEMVDKMLPEGEANIYL 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 ++ L L + + E+ +L + G+ + CV G + S GG Sbjct: 111 FEQLKSALKTMEEGKDPQIVVHIFEMAMLASAGYSPVMDVCVSCGSVDGDMMFSSLMGGI 170 Query: 171 VCRSVGLPYAEK 182 +C +K Sbjct: 171 LCPGCTHKDPQK 182 >gi|28899344|ref|NP_798949.1| DNA repair protein RecO [Vibrio parahaemolyticus RIMD 2210633] gi|260365943|ref|ZP_05778433.1| DNA repair protein RecO [Vibrio parahaemolyticus K5030] gi|260878965|ref|ZP_05891320.1| DNA repair protein RecO [Vibrio parahaemolyticus AN-5034] gi|260898318|ref|ZP_05906814.1| DNA repair protein RecO [Vibrio parahaemolyticus Peru-466] gi|260899639|ref|ZP_05908034.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ4037] gi|31340321|sp|Q87LP1|RECO_VIBPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28807580|dbj|BAC60833.1| DNA repair protein RecO [Vibrio parahaemolyticus RIMD 2210633] gi|308085237|gb|EFO34932.1| DNA repair protein RecO [Vibrio parahaemolyticus Peru-466] gi|308090490|gb|EFO40185.1| DNA repair protein RecO [Vibrio parahaemolyticus AN-5034] gi|308110552|gb|EFO48092.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ4037] gi|308113207|gb|EFO50747.1| DNA repair protein RecO [Vibrio parahaemolyticus K5030] gi|328474123|gb|EGF44928.1| DNA repair protein RecO [Vibrio parahaemolyticus 10329] Length = 243 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGK---- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L+G+ ++ R L P L+ L Sbjct: 69 -GSMK----TLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALT 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G+D C TG Sbjct: 124 ELAQCENPEPALRRFELALLSSMGYGVDFLHCAGTGE 160 >gi|161525338|ref|YP_001580350.1| DNA repair protein RecO [Burkholderia multivorans ATCC 17616] gi|189349925|ref|YP_001945553.1| DNA repair protein RecO [Burkholderia multivorans ATCC 17616] gi|221201353|ref|ZP_03574392.1| DNA repair protein RecO [Burkholderia multivorans CGD2M] gi|221208833|ref|ZP_03581831.1| DNA repair protein RecO [Burkholderia multivorans CGD2] gi|160342767|gb|ABX15853.1| DNA repair protein RecO [Burkholderia multivorans ATCC 17616] gi|189333947|dbj|BAG43017.1| DNA repair protein [Burkholderia multivorans ATCC 17616] gi|221171289|gb|EEE03738.1| DNA repair protein RecO [Burkholderia multivorans CGD2] gi|221178621|gb|EEE11029.1| DNA repair protein RecO [Burkholderia multivorans CGD2M] Length = 278 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 49 PAFVLHSYPYRETSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 107 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 108 --------EVRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPQPPLFNHYVLT 159 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D +V P+ G Sbjct: 160 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDQRYVFDPERG 212 >gi|221214086|ref|ZP_03587059.1| DNA repair protein RecO [Burkholderia multivorans CGD1] gi|221166263|gb|EED98736.1| DNA repair protein RecO [Burkholderia multivorans CGD1] Length = 275 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 46 PAFVLHSYPYRETSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 104 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 105 --------EVRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPQPPLFNHYVLT 156 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D +V P+ G Sbjct: 157 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDQRYVFDPERG 209 >gi|227112905|ref|ZP_03826561.1| DNA repair protein RecO [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328579|ref|ZP_03832603.1| DNA repair protein RecO [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 245 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 8/160 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A L+ S+ GL L R L L+ Sbjct: 60 WSGR-GEVKTLRSAEPVSL--ALPLTGSMLYSGLYVNELLSRVLEHETNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + + EL LL +G+G+D C +G Sbjct: 117 LQHLAAQDASPEPALRRFELALLGYLGYGVDFLHCAGSGE 156 >gi|188533140|ref|YP_001906937.1| DNA repair protein RecO [Erwinia tasmaniensis Et1/99] gi|238691986|sp|B2VI48|RECO_ERWT9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|188028182|emb|CAO96040.1| DNA repair protein RecO [Erwinia tasmaniensis Et1/99] Length = 245 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 20/167 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + Q+GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARAKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 W R EV A+ +S +L L G L+ R L EL Sbjct: 60 WSGR---------GEVKTLRSAEPVSLALPLSGTTLYCGLYVNELLSRVLQHETAFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 +D LN P + EL +L ++G+G+D C +G Sbjct: 111 FDYLNCIQTLAADPPSPEPALRRFELSMLGHLGYGVDFLHCAGSGEE 157 >gi|313618902|gb|EFR90766.1| DNA repair protein RecO [Listeria innocua FSL S4-378] Length = 255 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S +S G +C Sbjct: 118 LRDIDEGYDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFD 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|16800565|ref|NP_470833.1| DNA repair protein RecO [Listeria innocua Clip11262] gi|20139533|sp|Q92BQ0|RECO_LISIN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|16413970|emb|CAC96728.1| lin1497 [Listeria innocua Clip11262] Length = 255 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S +S G +C Sbjct: 118 LRDIDEGYDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFD 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|269965787|ref|ZP_06179884.1| DNA repair protein recO [Vibrio alginolyticus 40B] gi|269829655|gb|EEZ83892.1| DNA repair protein recO [Vibrio alginolyticus 40B] Length = 243 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRMTLMAKGARSKRSNLKGALQPFTPLLLKWSGK---- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ ++ R L P L+ L Sbjct: 69 -GSMK----TLRQAEPISLGLPLTGINLYSAMYVNELIGRILMAEVPMPALFHDYLHALT 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C TG Sbjct: 124 ELAHNENPEPALRRFELALLSAMGYGVDFLHCAGTGE 160 >gi|315635029|ref|ZP_07890310.1| recombination protein O [Aggregatibacter segnis ATCC 33393] gi|315476291|gb|EFU67042.1| recombination protein O [Aggregatibacter segnis ATCC 33393] Length = 247 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 13/168 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ +L +SY E +++++++T +GR + ++ R ++ +LQ + + W Sbjct: 14 NWQ-RGFVLHRKSYSETSLLVDLLTEDFGRISVLAKGARAKRSMLKGVLQPFTPLLLRWS 72 Query: 60 SRLAQNLGEFRFEVLESHCAKLL-SSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIF 117 R G+ + A L ++ LY G + R L +L+ Sbjct: 73 GR-----GDLKILTKAEPAAIALPLQNVALYSGFYLNELICRVLEPETAYPQLFQHYLQC 127 Query: 118 LNCHKIP-SVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + + + E LL+ +G+G+D T C +G V D+ + Sbjct: 128 LTQLALSQTHVEPALRTFEFQLLRTLGYGIDFTHCAGSGKAVEADMTY 175 >gi|209517220|ref|ZP_03266065.1| DNA repair protein RecO [Burkholderia sp. H160] gi|209502356|gb|EEA02367.1| DNA repair protein RecO [Burkholderia sp. H160] Length = 301 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 84/225 (37%), Gaps = 25/225 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + + W + Sbjct: 72 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLSLAWSGKS- 130 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L RF +P +L+ + Sbjct: 131 --------EMRTLTGAEWVGGMLPLTGDALLCGFYVNELLVRFCAREDPHPQLFHHYVVT 182 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWV-SPKSGGAVCRSV 175 L ++ E +LL+ G+ + L + V V D +V P+ G R Sbjct: 183 LTRLAHDEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLADGRYVFDPERG---VREA 239 Query: 176 GLPYAEKMLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + + V+ +++ A ++ + L + LN Y Sbjct: 240 SDEWPAQWPVVSGQTLLDMEKDDYHRAQTVAQSKTLMRFLLNTYL 284 >gi|47095411|ref|ZP_00233021.1| recombination protein O [Listeria monocytogenes str. 1/2a F6854] gi|254898374|ref|ZP_05258298.1| DNA repair protein RecO [Listeria monocytogenes J0161] gi|254912134|ref|ZP_05262146.1| recombination protein O [Listeria monocytogenes J2818] gi|254936462|ref|ZP_05268159.1| recombination protein O [Listeria monocytogenes F6900] gi|47016232|gb|EAL07155.1| recombination protein O [Listeria monocytogenes str. 1/2a F6854] gi|258609055|gb|EEW21663.1| recombination protein O [Listeria monocytogenes F6900] gi|293590106|gb|EFF98440.1| recombination protein O [Listeria monocytogenes J2818] Length = 255 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIETFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S S G +C Sbjct: 118 LRDIDEGYDPQILTQIYEMKMLPMLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFE 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|156932892|ref|YP_001436808.1| hypothetical protein ESA_00694 [Cronobacter sakazakii ATCC BAA-894] gi|166221891|sp|A7MH01|RECO_ENTS8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|156531146|gb|ABU75972.1| hypothetical protein ESA_00694 [Cronobacter sakazakii ATCC BAA-894] Length = 245 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E ++I+++ + + GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHARPWSETSLIIDLFSEESGRVRVVAKGARRKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFL-PEREPCLEL 110 W R V A+ +S +L L G+ L R L PE Sbjct: 60 WSGRGD---------VKNLTSAEAVSLALPLSGITLYSGLYVNELVARVLEPETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D L+ + EL LL ++G+G+D C TG D Sbjct: 111 FDYLHCIQALAGASGSPEPALRRFELALLGHLGYGVDFLHCAGTGDEVD 159 >gi|307132116|ref|YP_003884132.1| gap repair protein [Dickeya dadantii 3937] gi|306529645|gb|ADM99575.1| gap repair protein [Dickeya dadantii 3937] Length = 244 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 8/160 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSENEGRVRVLAKGARARRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A LS L GL L R L L+ Sbjct: 60 WGGR-GEVKTLRNAEPVSL--ALPLSGPLLYSGLYVNELLTRVLELETDYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 L S + + EL LL+++G+G+D C +G Sbjct: 117 LQQLAAASGSPEPALRRFELALLEHLGYGVDFLHCAGSGE 156 >gi|16803500|ref|NP_464985.1| DNA repair protein RecO [Listeria monocytogenes EGD-e] gi|217964394|ref|YP_002350072.1| DNA repair protein RecO [Listeria monocytogenes HCC23] gi|224499690|ref|ZP_03668039.1| DNA repair protein RecO [Listeria monocytogenes Finland 1988] gi|254827748|ref|ZP_05232435.1| DNA repair protein recO [Listeria monocytogenes FSL N3-165] gi|254829781|ref|ZP_05234436.1| DNA repair protein RecO [Listeria monocytogenes 10403S] gi|255030078|ref|ZP_05302029.1| DNA repair protein RecO [Listeria monocytogenes LO28] gi|290894222|ref|ZP_06557191.1| DNA repair protein recO [Listeria monocytogenes FSL J2-071] gi|20139471|sp|Q8Y752|RECO_LISMO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764641|sp|B8DE51|RECO_LISMH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|16410889|emb|CAC99538.1| lmo1460 [Listeria monocytogenes EGD-e] gi|217333664|gb|ACK39458.1| DNA repair protein RecO [Listeria monocytogenes HCC23] gi|258600127|gb|EEW13452.1| DNA repair protein recO [Listeria monocytogenes FSL N3-165] gi|290556219|gb|EFD89764.1| DNA repair protein recO [Listeria monocytogenes FSL J2-071] gi|307571041|emb|CAR84220.1| DNA repair protein O [Listeria monocytogenes L99] gi|313608757|gb|EFR84575.1| DNA repair protein RecO [Listeria monocytogenes FSL F2-208] Length = 255 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIETFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S S G +C Sbjct: 118 LRDIDEGYDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFE 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|17545784|ref|NP_519186.1| DNA repair protein RecO [Ralstonia solanacearum GMI1000] gi|20139464|sp|Q8Y0H9|RECO_RALSO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|17428078|emb|CAD14767.1| probable dna repair protein reco (recombination protein o) [Ralstonia solanacearum GMI1000] gi|299067033|emb|CBJ38228.1| DNA repair protein recO (Recombination protein O) [Ralstonia solanacearum CMR15] Length = 272 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + ++ +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLELYDMLN 115 EV A+ + L L G L +F+ + L+ Sbjct: 101 ---------GEVKTLTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYV 151 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 LN + E +LL+ GF L +CV Sbjct: 152 ETLNKLAHGEPVAFTLRAFERVLLRETGFAAQLDRCV 188 >gi|315282356|ref|ZP_07870784.1| DNA repair protein RecO [Listeria marthii FSL S4-120] gi|313613998|gb|EFR87714.1| DNA repair protein RecO [Listeria marthii FSL S4-120] Length = 255 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S +S G +C Sbjct: 118 LRDIDEGYDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFD 177 Query: 178 PYAEKM 183 +M Sbjct: 178 RDRYRM 183 >gi|300691970|ref|YP_003752965.1| DNA repair protein recO (Recombination protein O) [Ralstonia solanacearum PSI07] gi|299079030|emb|CBJ51692.1| DNA repair protein recO (Recombination protein O) [Ralstonia solanacearum PSI07] Length = 272 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + ++ +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLELYDMLN 115 EV A+ + L L G L +F+ + L+ Sbjct: 101 ---------GEVKTLTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYV 151 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 LN + E +LL+ GF L +C+ Sbjct: 152 ETLNKLAHGEPVAFTLRAFERVLLRETGFAAQLDRCI 188 >gi|254230526|ref|ZP_04923897.1| DNA repair protein RecO [Vibrio sp. Ex25] gi|262393272|ref|YP_003285126.1| DNA recombination and repair protein RecO [Vibrio sp. Ex25] gi|151936951|gb|EDN55838.1| DNA repair protein RecO [Vibrio sp. Ex25] gi|262336866|gb|ACY50661.1| DNA recombination and repair protein RecO [Vibrio sp. Ex25] Length = 243 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRMTLMAKGARSKRSNLKGALQPFTPLLLKWSGK---- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ ++ R L P L+ L Sbjct: 69 -GSMK----TLRQAEPISLGLPLTGINLYSAMYVNELIGRILMAEVPMPALFHDYLHALT 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G+D C TG Sbjct: 124 ELAHNENPEPALRRFELALLSSMGYGVDFLHCAGTGE 160 >gi|299822894|ref|ZP_07054780.1| recombination protein O [Listeria grayi DSM 20601] gi|299816423|gb|EFI83661.1| recombination protein O [Listeria grayi DSM 20601] Length = 255 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ Y E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTDYRESDKIVVLYTREFGKIGVVARGAKKTKSRLAAVTQPFVNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + E++++ + L Y L + E+ LY+++ Sbjct: 60 FA--SSGLGTLQQGELIQNFSSIQQDIFLTAYAAYICELLDKATDEKRANPSLYELVFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +GF + KC + G T S S G +C Sbjct: 118 LRDIDEGYDPEILVQLFEMKMLPVMGFYPVMDKCAICGETTGHFDFSTHSDGIICHRCFE 177 Query: 178 PYAEKM 183 ++ Sbjct: 178 KDPYRL 183 >gi|300704605|ref|YP_003746208.1| DNA repair protein reco (recombination protein o) [Ralstonia solanacearum CFBP2957] gi|299072269|emb|CBJ43602.1| DNA repair protein recO (Recombination protein O) [Ralstonia solanacearum CFBP2957] Length = 272 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + ++ +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRVALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLELYDMLN 115 EV A+ + L L G L +F+ + L+ Sbjct: 101 ---------GEVKTLTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYV 151 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 LN + E +LL+ GF L +C+ Sbjct: 152 DTLNKLAHGEPVAFTLRAFERVLLRETGFAARLDRCI 188 >gi|89075086|ref|ZP_01161527.1| DNA repair protein RecO [Photobacterium sp. SKA34] gi|89049173|gb|EAR54738.1| DNA repair protein RecO [Photobacterium sp. SKA34] Length = 236 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 62/171 (36%), Gaps = 17/171 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M +L R Y E ++IL+V + +GR + + R ++ LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDHGRLTLLSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSI----VPLFRFLPEREPCLELYDM 113 + + E + + L Y L S L R L P +L+ Sbjct: 61 SGK--GAMPVLTHAEPIS------IGLPLRSYILYSAMYVNEILVRVLGNHTPYPQLFLD 112 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + EL LL ++G+G+D C +G V ++ + Sbjct: 113 YLNVLRELAQADNPEPALRRFELSLLHHLGYGIDFLHCAGSGLSVEDNMTY 163 >gi|284006741|emb|CBA71998.1| DNA repair protein [Arsenophonus nasoniae] Length = 237 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + +S R ++ LQ + + W Sbjct: 4 WQ-RAFVLHTRPYSETSLLLDFFTENEGRIRLLAKGARSRRSNLKGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLF-----LY-GLQSIVPLFRFLPEREPCLELYDML 114 + E+ A+ +S +L LY GL L R L + P L+ Sbjct: 63 K---------GEMKTLRSAEPISLALPFTGTVLYSGLYVNELLARVLAQNIPYQSLFFEY 113 Query: 115 NIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGV 156 L + + + EL LL ++G+G+D C +G Sbjct: 114 LTCLQILAGSESTPEHALRRFELSLLSHLGYGVDFLHCSGSGE 156 >gi|260771920|ref|ZP_05880838.1| DNA recombination and repair protein RecO [Vibrio metschnikovii CIP 69.14] gi|260613212|gb|EEX38413.1| DNA recombination and repair protein RecO [Vibrio metschnikovii CIP 69.14] Length = 241 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W Sbjct: 9 FVLNRRPYSESSLILDVFSEEYGRLTLMAKGARGKRSQLKGALQPFTPLLLKWSGNST-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 + A+ +S L L G+ ++ R L P L+ L Sbjct: 67 -------MKTLRQAESISLGLPLSGISLYSAMYVNELVGRVLANDVPSPALFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G+D C TG Sbjct: 120 ELAQSDNPEPALRRFELALLSSLGYGVDFLHCAGTGE 156 >gi|260598948|ref|YP_003211519.1| DNA repair protein recO [Cronobacter turicensis z3032] gi|260218125|emb|CBA32921.1| DNA repair protein recO [Cronobacter turicensis z3032] Length = 245 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E ++I+++ + + GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHARPWSETSLIIDLFSEESGRVRVVAKGARRKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFL-PEREPCLEL 110 W R V A+ +S +L L G+ L R L PE Sbjct: 60 WSGRGD---------VKNLTSAEAVSLALPLSGITLYSGLYVNELVARVLEPETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D L+ + EL LL ++G+G+D C TG D Sbjct: 111 FDYLHCIQALAGATGTPEPALRRFELALLGHLGYGVDFLHCAGTGDEVD 159 >gi|328474972|gb|EGF45766.1| DNA repair protein RecO [Listeria monocytogenes 220] Length = 254 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 5/185 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNWR 59 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKTKSRLAAVTQLFTNGYFTFF 59 Query: 60 SRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 60 G--SNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQIL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L +G + KC + G T S S G +C Sbjct: 118 RDINEGYDPQILTQIFEMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFEK 177 Query: 179 YAEKM 183 +M Sbjct: 178 DRYRM 182 >gi|37681013|ref|NP_935622.1| DNA repair protein RecO [Vibrio vulnificus YJ016] gi|42559437|sp|Q7MHP0|RECO_VIBVY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|37199763|dbj|BAC95593.1| Recombinational DNA repair protein [Vibrio vulnificus YJ016] Length = 243 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + ++GR + +S R ++ LQ + + W + A Sbjct: 11 FVLHRRPYSESSLILDVFSEEFGRITLMSKGARSKRSNLKGALQPFTPLLLKWSGKGA-- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 + A+ +S L L G+ L+ R L + P L+ L Sbjct: 69 -------MKTLRQAEPISLGLPLTGINLYSALYVNELIGRVLMQEVPMPGLFHDYLFALT 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C TG Sbjct: 122 ELAQADNPEPALRRFELALLAAMGYGVDFLHCAGTGE 158 >gi|256821982|ref|YP_003145945.1| DNA repair protein RecO [Kangiella koreensis DSM 16069] gi|256795521|gb|ACV26177.1| DNA repair protein RecO [Kangiella koreensis DSM 16069] Length = 239 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 18/150 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAGNLVRVNWRSRLA 63 A +L R + E ++I+E+ T + GR VR + + + +LQ ++V+W R Sbjct: 9 AFVLHTRPFKETSLIVELFTEESGRVNVLAKGVRGNRKNSNRALLQPFQPIKVSWFGRS- 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER------EPCLELYDMLNIF 117 E+ + S L G+ S+ L+ +P +++ Sbjct: 68 --------ELKTLKQVEADGFSHRLNGIASLSALYLNELLLRLFIQWDPHPDIFHFYQTS 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L ++ I + EL LL +G+ +D Sbjct: 120 LQHLQLGDKPNLILREFELELLDVLGYAID 149 >gi|238762799|ref|ZP_04623768.1| DNA repair protein recO [Yersinia kristensenii ATCC 33638] gi|238699104|gb|EEP91852.1| DNA repair protein recO [Yersinia kristensenii ATCC 33638] Length = 241 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 10/168 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A L+ S+ GL L R L + L+ Sbjct: 60 WTGR-GEVKTLRSAEPVSL--ALPLTGSMLYSGLYVNELLARVLEHQTNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + ++ EL +L ++G+G+D C +G V+ + + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTY 164 >gi|313623741|gb|EFR93883.1| DNA repair protein RecO [Listeria innocua FSL J1-023] Length = 255 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG + EV+E+ + Y L + ER+P LY++ Sbjct: 60 FG--GNGLGTLQQGEVIENFSFIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S +S G +C Sbjct: 118 LRDIDEGYDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFD 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|295399212|ref|ZP_06809194.1| DNA repair protein RecO [Geobacillus thermoglucosidasius C56-YS93] gi|294978678|gb|EFG54274.1| DNA repair protein RecO [Geobacillus thermoglucosidasius C56-YS93] Length = 264 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 8/187 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNL-VRVNWRSRL 62 +AI++ YGE N I+ TR++G+ R + S R+ + Q + RSR Sbjct: 6 EAIVIRATDYGETNKIVTFFTREWGKVAAMARGAKKPSSRLSAVTQLFTYGYYLIQRSR- 64 Query: 63 AQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +G + ++++S A Y + + E++ L+++L L Sbjct: 65 --GVGVLQQGDIIDSMRATREDIFTAAYASYIVELTDKITEEQQRNPYLFELLLQTLQYM 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + E +L +G L C + G T+ S K G +C Y Sbjct: 123 NEGRDLEILASIYETKMLSVMGIPPKLDYCAICGRTEGKFSFSIKEAGFLCHRC-EQYDP 181 Query: 182 KMLVLPS 188 + L + Sbjct: 182 HRIPLSA 188 >gi|114567078|ref|YP_754232.1| DNA repair protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|119361496|sp|Q0AWP3|RECO_SYNWW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114338013|gb|ABI68861.1| DNA replication and repair protein RecO [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 250 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 86/238 (36%), Gaps = 33/238 (13%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQA-------- 50 MY + AI++ Y E + ++ + G+ R + R ++ +Q Sbjct: 1 MYLRSRAIVIKNMDYRESDKLVTIFCEHEGKMKAVARGIKKPRSSLRACVQPFCHSSLFF 60 Query: 51 --GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL 108 G + + + +L G R + S LY L + L + L E Sbjct: 61 SRGKGMNLITQGKLLDFYGNTREDFERS-----------LYALYLMELLDKSLMEGVAIP 109 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 LY L+ + E+ LL N+G+ L CV+ G DL S G Sbjct: 110 RLYTSTLEVLSHLNHSGYNPMLIRYFEMNLLVNLGYSPLLDHCVLCGKKDDLKVFSLPDG 169 Query: 169 GAVCR------SVGLPYAEKMLVLPSFLWKEEQTIDADSLK---SAFQLTDYFLNKYA 217 G +CR S + +++ L L L + + ++ A + +YFL KY Sbjct: 170 GMLCRDCSYQASGAVSLSKETLAL-ISLLGRSRLATVERVRVSNKAQKELEYFLEKYL 226 >gi|284801847|ref|YP_003413712.1| DNA repair protein RecO [Listeria monocytogenes 08-5578] gi|284994989|ref|YP_003416757.1| DNA repair protein RecO [Listeria monocytogenes 08-5923] gi|284057409|gb|ADB68350.1| DNA repair protein RecO [Listeria monocytogenes 08-5578] gi|284060456|gb|ADB71395.1| DNA repair protein RecO [Listeria monocytogenes 08-5923] Length = 255 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--SNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S S G +C Sbjct: 118 LRDIDEGYDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFE 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|295677174|ref|YP_003605698.1| DNA repair protein RecO [Burkholderia sp. CCGE1002] gi|295437017|gb|ADG16187.1| DNA repair protein RecO [Burkholderia sp. CCGE1002] Length = 301 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 22/187 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + + W + Sbjct: 72 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLSLAWSGKS- 130 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L RF +P +L+ + Sbjct: 131 --------EMRTLTGAEWVGGMLPLTGDALLCGFYVNELLVRFCAREDPHPQLFHHYVVT 182 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWV-SPKSGGAVCRSV 175 L ++ E +LL+ G+ + L + V V D +V P+ G R Sbjct: 183 LTRLAHDEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLADGRYVFDPERG---VREA 239 Query: 176 GLPYAEK 182 + + Sbjct: 240 SDEWPAQ 246 >gi|153839962|ref|ZP_01992629.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ3810] gi|149746521|gb|EDM57510.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ3810] Length = 162 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGK---- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L+G+ ++ R L P L+ L Sbjct: 69 -GSMK----TLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALT 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G+D C TG Sbjct: 124 ELAQCENPEPALRRFELALLSSMGYGVDFLHCAGTGE 160 >gi|319651592|ref|ZP_08005719.1| DNA repair protein RecO [Bacillus sp. 2_A_57_CT2] gi|317396659|gb|EFV77370.1| DNA repair protein RecO [Bacillus sp. 2_A_57_CT2] Length = 250 Score = 89.4 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 11/181 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVR 55 M + + I++ +Y E N I+ + TR++G+ R + R+ + Q GN + Sbjct: 1 MLDKCEGIVIRTTNYSETNKIVTLYTREWGKVGVMARGAKKPNSRLAAVTQLFTYGNFLV 60 Query: 56 VNWRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 LG + +++ S + L Y + + + +++P L+++L Sbjct: 61 QRGSG-----LGTLQQGDMISSMRSIKEDIFLTAYASYIVDLTDKSIEDKKPNPFLFELL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN + E+ +L +G L +C V G T S + G +C Sbjct: 116 YQTLNLINEGYDPEILTNIYEMKMLNALGLYPVLDQCSVCGSTDGHFAFSIRENGLICHR 175 Query: 175 V 175 Sbjct: 176 C 176 >gi|294637609|ref|ZP_06715889.1| DNA repair protein RecO [Edwardsiella tarda ATCC 23685] gi|291089239|gb|EFE21800.1| DNA repair protein RecO [Edwardsiella tarda ATCC 23685] Length = 243 Score = 89.4 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 21/171 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + +S R ++ LQ + + W Sbjct: 5 WQ-RAFVLHARPYSETSLLLDTFTEGQGRVRLLAKGARSRRSQLKGALQPFTPLLIRWGG 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI------VPLFRFLPEREPCLEL-YDM 113 + EV A+ +S +L L G+ L R L + L +D Sbjct: 64 K---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYSALFFDY 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L+ + + EL LL +G+G+D C +G V + + Sbjct: 115 LHCIQQLAGHSGSPEPVLRRFELALLAQLGYGIDFLHCAGSGEPVADGMTY 165 >gi|238026619|ref|YP_002910850.1| DNA repair protein RecO [Burkholderia glumae BGR1] gi|237875813|gb|ACR28146.1| DNA repair protein RecO [Burkholderia glumae BGR1] Length = 281 Score = 89.4 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 66/173 (38%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 52 PGFVLHSHPYRETSLIIDVLTRDHGRVALVAKGAKRPHSALRGVLQTFQPLALSWSGKS- 110 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 111 --------EMRTLTGAEWVGGMLPLGGDALLCGFYVNELLVKFCAREDPFPALFQHYLVT 162 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV-TGVTQDLLWV-SPKSG 168 L ++ E +LL+ G+ L + V VT D +V P+ G Sbjct: 163 LARLAHDEPAVQVLRSFERVLLRETGYARALNRTVARRAVTADGRYVFDPERG 215 >gi|187924873|ref|YP_001896515.1| DNA repair protein RecO [Burkholderia phytofirmans PsJN] gi|187716067|gb|ACD17291.1| DNA repair protein RecO [Burkholderia phytofirmans PsJN] Length = 309 Score = 89.4 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + ++W + Sbjct: 80 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKS- 138 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P +L+ + Sbjct: 139 --------EVRTLTGAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVT 190 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 + ++ E +LL+ G+ + L + V Sbjct: 191 MTRLAHDEPPVQVLRSFERVLLRETGYAMALDRTVA 226 >gi|46907688|ref|YP_014077.1| DNA repair protein RecO [Listeria monocytogenes serotype 4b str. F2365] gi|47093467|ref|ZP_00231230.1| recombination protein O [Listeria monocytogenes str. 4b H7858] gi|226224061|ref|YP_002758168.1| RecO protein [Listeria monocytogenes Clip81459] gi|254824481|ref|ZP_05229482.1| recombination protein O [Listeria monocytogenes FSL J1-194] gi|254852085|ref|ZP_05241433.1| recombination protein O [Listeria monocytogenes FSL R2-503] gi|254932645|ref|ZP_05266004.1| recombination protein O [Listeria monocytogenes HPB2262] gi|255521275|ref|ZP_05388512.1| DNA repair protein RecO [Listeria monocytogenes FSL J1-175] gi|300765603|ref|ZP_07075582.1| recombination protein O [Listeria monocytogenes FSL N1-017] gi|61215088|sp|Q71ZL0|RECO_LISMF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|259563681|sp|C1KVA7|RECO_LISMC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|46880957|gb|AAT04254.1| recombination protein O [Listeria monocytogenes serotype 4b str. F2365] gi|47018143|gb|EAL08913.1| recombination protein O [Listeria monocytogenes str. 4b H7858] gi|225876523|emb|CAS05232.1| Putative RecO protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605384|gb|EEW17992.1| recombination protein O [Listeria monocytogenes FSL R2-503] gi|293584204|gb|EFF96236.1| recombination protein O [Listeria monocytogenes HPB2262] gi|293593719|gb|EFG01480.1| recombination protein O [Listeria monocytogenes FSL J1-194] gi|300513704|gb|EFK40772.1| recombination protein O [Listeria monocytogenes FSL N1-017] gi|328465503|gb|EGF36732.1| DNA repair protein RecO [Listeria monocytogenes 1816] gi|332311901|gb|EGJ24996.1| DNA repair protein RecO [Listeria monocytogenes str. Scott A] Length = 255 Score = 89.4 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 6/186 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 1 ME-KCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTF 59 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + EV+E+ + + Y L + ER+P LY++ Sbjct: 60 FG--SNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQI 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + E+ +L +G + KC + G T S S G +C Sbjct: 118 LRDINEGYDPQILTQIFEMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFE 177 Query: 178 PYAEKM 183 +M Sbjct: 178 KDRYRM 183 >gi|170695424|ref|ZP_02886569.1| DNA repair protein RecO [Burkholderia graminis C4D1M] gi|170139615|gb|EDT07798.1| DNA repair protein RecO [Burkholderia graminis C4D1M] Length = 307 Score = 89.4 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 86/244 (35%), Gaps = 33/244 (13%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + ++W + Sbjct: 78 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKS- 136 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P +L+ + Sbjct: 137 --------EVRTLTGAEWVGGMLPLTGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVT 188 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG-GAVCRS 174 + ++ E +LL+ G+ + L + V +V P+ G Sbjct: 189 MTRLAHDEPPVQVLRSFERVLLRETGYAMSLDRTVTRKAVDAGKRYVFDPERGVREASDD 248 Query: 175 VGLPYA----EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 + + + +L +++ A ++ + L + LN Y R+ Sbjct: 249 LPAQWPVVAGQTLL-----DMEQDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQ 299 Query: 231 NFLG 234 + Sbjct: 300 ILID 303 >gi|109900011|ref|YP_663266.1| DNA repair protein RecO [Pseudoalteromonas atlantica T6c] gi|119361472|sp|Q15PH6|RECO_PSEA6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|109702292|gb|ABG42212.1| DNA replication and repair protein RecO [Pseudoalteromonas atlantica T6c] Length = 240 Score = 89.0 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 7/153 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 +L R+Y E + ++ + T + G+ V+ + + + +LQ + + R Sbjct: 8 GYVLHRRAYRETSFLVNIFTLENGKVSAVVKGVRGSKSDKKSLLQPFQPLLIGVSGRSE- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + +ES A + + LY L L R L + P E++ + ++ Sbjct: 67 ---LKNLQQVESTGAMIRLAGQALYCALYLNEVLNRVLADEIPHPEIFVLYQQSMHALVA 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + EL LL +G+G+DLT TG Sbjct: 124 QTNFEPVLRSFELGLLDALGYGIDLTHDADTGQ 156 >gi|123441365|ref|YP_001005352.1| DNA repair protein RecO [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166221916|sp|A1JKK5|RECO_YERE8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|122088326|emb|CAL11117.1| DNA repair protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 241 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 8/160 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A L+ S+ GL L R L + L+ Sbjct: 60 WTGR-GEVKTLRSAEPVSL--ALPLTGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 L + ++ EL +L ++G+G+D C +G Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQ 156 >gi|307260994|ref|ZP_07542676.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869296|gb|EFN01091.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 240 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 7/157 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + ++ +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPHSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L + EL+ + Sbjct: 63 GK-GDLKTLTKAEPASLTLP--MQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 P I I E +LK +G+G++ + C TG Sbjct: 120 RLATQPEKIESILRTFEFQMLKVLGYGVNFSICAATG 156 >gi|198245563|ref|YP_002216646.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|238690360|sp|B5FRC3|RECO_SALDC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|197940079|gb|ACH77412.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624401|gb|EGE30746.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 242 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ +LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGVLQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|115351066|ref|YP_772905.1| DNA repair protein RecO [Burkholderia ambifaria AMMD] gi|172060071|ref|YP_001807723.1| DNA repair protein RecO [Burkholderia ambifaria MC40-6] gi|115281054|gb|ABI86571.1| DNA replication and repair protein RecO [Burkholderia ambifaria AMMD] gi|171992588|gb|ACB63507.1| DNA repair protein RecO [Burkholderia ambifaria MC40-6] Length = 279 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 109 --------EVRTLTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLT 160 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D +V P+ G Sbjct: 161 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERG 213 >gi|238759684|ref|ZP_04620844.1| DNA repair protein recO [Yersinia aldovae ATCC 35236] gi|238702112|gb|EEP94669.1| DNA repair protein recO [Yersinia aldovae ATCC 35236] Length = 244 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 8/160 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R ++ LQ + V Sbjct: 4 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRIRVLAKGARGRRSNLKGCLQPFTPLLVR 62 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A L+ S+ GL L R L + L+ Sbjct: 63 WAGR-GEVKTLRSAEPVSL--ALPLTGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHC 119 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 L + ++ EL +L ++G+G+D C +G Sbjct: 120 LQALAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGE 159 >gi|238788222|ref|ZP_04632017.1| DNA repair protein recO [Yersinia frederiksenii ATCC 33641] gi|238723809|gb|EEQ15454.1| DNA repair protein recO [Yersinia frederiksenii ATCC 33641] Length = 241 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 10/168 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A LS S+ GL L R L + L+ Sbjct: 60 WTGR-GEVKTLRSAEPVSL--ALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + ++ EL +L ++G+G+D C +G V+ + + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTY 164 >gi|312795544|ref|YP_004028466.1| DNA repair protein recO [Burkholderia rhizoxinica HKI 454] gi|312167319|emb|CBW74322.1| DNA repair protein recO [Burkholderia rhizoxinica HKI 454] Length = 308 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 79/228 (34%), Gaps = 27/228 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V TR +GR + + ++ +LQ + ++W + Sbjct: 75 PGFVLHTYPYRETSLIIDVFTRMHGRLALVAKGAKRPHSALRGVLQTFQPLALSWTGKS- 133 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L G + L RF +P L+D + Sbjct: 134 --------EMRTLTRAEWVGGMRPLAGDALLCGFYVNELLVRFCAREDPHTALFDHYLLT 185 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWV-SPKSGGAVCRSV 175 L ++ E +LL+ G+ + L + V V +V P+ VC Sbjct: 186 LTRLAHDEPAVQVLRSFERVLLRETGYAMSLDRTVARQNVVAGRSYVFDPE--RGVCDVE 243 Query: 176 GLPYAEKMLVLPSF------LWKEEQTIDADSLKSAFQLTDYFLNKYA 217 L L P + + A ++ + L + LN Y Sbjct: 244 MLEPDAHALRGPVIAGQTLLDMERDDYSRAQTVAQSKTLMRFLLNTYL 291 >gi|325523760|gb|EGD02014.1| DNA repair protein RecO [Burkholderia sp. TJI49] Length = 279 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 109 --------EVRTLTGAEWVGGMLPLGGDALLCGFYANELLVKFCAREDPQPPLFNHYVLT 160 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 L ++ E +LL+ G+ + L + V Sbjct: 161 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVA 196 >gi|307730525|ref|YP_003907749.1| DNA repair protein RecO [Burkholderia sp. CCGE1003] gi|307585060|gb|ADN58458.1| DNA repair protein RecO [Burkholderia sp. CCGE1003] Length = 306 Score = 89.0 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 87/244 (35%), Gaps = 33/244 (13%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + ++W + Sbjct: 77 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKS- 135 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P +L+ + Sbjct: 136 --------EVRTLTGAEWVGGMLPLTGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVT 187 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG-GAVCRS 174 + ++ E +LL+ G+ + L + V + +V P+ G Sbjct: 188 MTRLAHDEPPVQVLRSFERVLLRETGYAMSLDRTVTRKAVEAGSRYVFDPERGVREASDD 247 Query: 175 VGLPYA----EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 + + + +L +++ A ++ + L + LN Y R+ Sbjct: 248 LPAQWPVVAGQTLL-----DMEKDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQ 298 Query: 231 NFLG 234 + Sbjct: 299 ILID 302 >gi|171322521|ref|ZP_02911314.1| DNA repair protein RecO [Burkholderia ambifaria MEX-5] gi|171092148|gb|EDT37556.1| DNA repair protein RecO [Burkholderia ambifaria MEX-5] Length = 279 Score = 89.0 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 109 --------EVRTLTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLT 160 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D +V P+ G Sbjct: 161 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERG 213 >gi|54310185|ref|YP_131205.1| DNA repair protein RecO [Photobacterium profundum SS9] gi|61215025|sp|Q6LMS4|RECO_PHOPR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|46914626|emb|CAG21403.1| putative DNA repair protein RecO [Photobacterium profundum SS9] Length = 236 Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 16/168 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M +L R Y E ++IL+V + YGR + + R ++ LQ + + W Sbjct: 1 MEGLQRCFVLHYRPYSETSLILDVFSEDYGRLTILSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DM 113 R G + E + + + L R L P L+ D Sbjct: 61 TGR-----GSMKTLTHAEPISISLP--MRGYILYSAFYLNEVLVRVLENDTPYPVLFMDY 113 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDL 160 LN + + + + EL LL ++G+G+D C +G+ DL Sbjct: 114 LNALRELAQADNPEPAL-RRFELALLHHLGYGIDFLHCAGSGLPIDDL 160 >gi|170699585|ref|ZP_02890625.1| DNA repair protein RecO [Burkholderia ambifaria IOP40-10] gi|170135536|gb|EDT03824.1| DNA repair protein RecO [Burkholderia ambifaria IOP40-10] Length = 279 Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 109 --------EVRTLTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLT 160 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D +V P+ G Sbjct: 161 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERG 213 >gi|323491196|ref|ZP_08096382.1| DNA repair protein RecO [Vibrio brasiliensis LMG 20546] gi|323314564|gb|EGA67642.1| DNA repair protein RecO [Vibrio brasiliensis LMG 20546] Length = 243 Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W Sbjct: 10 FVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGN---- 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ ++ R L P L+ L Sbjct: 66 -GSMK----TLRQAEPISLGLPLSGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL +L +G+G+D C TG Sbjct: 121 ELAQCDNPEPALRRFELAMLSAMGYGVDFMHCAGTGE 157 >gi|251788700|ref|YP_003003421.1| DNA repair protein RecO [Dickeya zeae Ech1591] gi|247537321|gb|ACT05942.1| DNA repair protein RecO [Dickeya zeae Ech1591] Length = 244 Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 8/160 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSEDEGRVRVLAKGARARRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A LS SL GL L R L L+ Sbjct: 60 WGGR-GEVKTLRNAEPVSL--ALPLSGSLLYSGLYVNELLTRVLELETNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + + + EL LL+++G+G+D C +G Sbjct: 117 LQQLAAANGSPEPALRRFELALLEHLGYGVDFLHCAGSGE 156 >gi|238750384|ref|ZP_04611885.1| DNA repair protein recO [Yersinia rohdei ATCC 43380] gi|238711315|gb|EEQ03532.1| DNA repair protein recO [Yersinia rohdei ATCC 43380] Length = 241 Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 10/168 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R + E + A LS S+ GL L R L ++ L+ Sbjct: 60 WVGR-GEIKTLRSAEPVSL--ALPLSGSMLYSGLYVNELLSRVLEQQTNYSALFFDYLHC 116 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 L + ++ EL +L ++G+G+D C +G V+ + + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTY 164 >gi|168232157|ref|ZP_02657215.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469835|ref|ZP_03075819.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456199|gb|EDX45038.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333544|gb|EDZ20308.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 242 Score = 88.7 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T+C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTRCAGSGERVD 159 >gi|238793771|ref|ZP_04637392.1| DNA repair protein recO [Yersinia intermedia ATCC 29909] gi|238726835|gb|EEQ18368.1| DNA repair protein recO [Yersinia intermedia ATCC 29909] Length = 241 Score = 88.7 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 7/157 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWAG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + E + A L+ S+ GL L R L + L+ L Sbjct: 63 R-GEVKTLRSAEPVSL--ALPLTGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHCLQA 119 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 + ++ EL +L ++G+G+D C +G Sbjct: 120 LAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQ 156 >gi|78065720|ref|YP_368489.1| DNA repair protein RecO [Burkholderia sp. 383] gi|119361450|sp|Q39I71|RECO_BURS3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|77966465|gb|ABB07845.1| DNA replication and repair protein RecO [Burkholderia sp. 383] Length = 278 Score = 88.7 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 49 PAYVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 107 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 108 --------EVRTLTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLT 159 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D +V P+ G Sbjct: 160 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERG 212 >gi|322514174|ref|ZP_08067239.1| recombination protein O [Actinobacillus ureae ATCC 25976] gi|322119960|gb|EFX91962.1| recombination protein O [Actinobacillus ureae ATCC 25976] Length = 240 Score = 88.7 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 55/157 (35%), Gaps = 7/157 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 W +L R Y E +++++ T +GR + + R ++ +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEDHGRITLLAKGARRPRSSLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + E + + G L + L + L+ + Sbjct: 63 GK-GELKTLTKAEPASLTLP--MQTLALYSGFYVNEVLAKVLENQTAYPALFQHYLQCVT 119 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG 155 + ++ E LK +G+G++ C TG Sbjct: 120 HLATQPDNLEAILRTFEFHTLKALGYGVNFGVCAATG 156 >gi|242240201|ref|YP_002988382.1| DNA repair protein RecO [Dickeya dadantii Ech703] gi|242132258|gb|ACS86560.1| DNA repair protein RecO [Dickeya dadantii Ech703] Length = 244 Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 6/159 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M A +L R Y E +++L++ T GR + ++ R ++ LQ + V W Sbjct: 1 MEGWQRAFVLHGRPYSETSLLLDLFTENEGRVRVLAKGARARRSNLKGALQPFTPLLVRW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + E + A L +L GL L R L L+ L Sbjct: 61 GGR-GEVKTLRNAEPVSL--ALPLHGALLYSGLYVNELLMRVLEFETDYSALFFDYLYCL 117 Query: 119 NCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + EL LL ++G+G+D C +G Sbjct: 118 QQLAAAQGSPEPALRRFELALLAHLGYGVDFLHCAGSGQ 156 >gi|312110186|ref|YP_003988502.1| DNA repair protein RecO [Geobacillus sp. Y4.1MC1] gi|311215287|gb|ADP73891.1| DNA repair protein RecO [Geobacillus sp. Y4.1MC1] Length = 264 Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 8/187 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNL-VRVNWRSRL 62 +AI++ YGE N I+ TR++G+ R + S R+ + Q + RSR Sbjct: 6 EAIVIRATDYGETNKIVTFFTREWGKVAAMARGAKKPSSRLSAVTQLFTYGYYLIQRSR- 64 Query: 63 AQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +G + ++++S A Y + + E + L+++L L Sbjct: 65 --GVGVLQQGDIIDSMRATREDIFTAAYASYIVELTDKITEEHQRNPYLFELLLQTLQYM 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + E +L +G L C + G T+ S K G +C Y Sbjct: 123 NEGRDLEILASIYETKMLSVMGIPPKLDYCAICGRTEGKFSFSIKEAGFLCHRC-EQYDP 181 Query: 182 KMLVLPS 188 + L + Sbjct: 182 HRIPLSA 188 >gi|311693677|gb|ADP96550.1| DNA repair protein RecO [marine bacterium HP15] Length = 242 Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 7/159 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 Q+ A +L R + E ++++++ + +GR R S + ++ LQ + V+W Sbjct: 5 ELQEPAYVLHRRPWRETSLMVDLFSLNHGRMTVIARGANSAKSPLKAQLQPFQPLIVDWA 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R ++ ++ ++ LY GL L R LP +P L+ + Sbjct: 65 GRGD----LKTLTQVDVRAGPTITRTVSLYSGLYLNELLQRILPAADPHPTLFAAYIDAI 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + + EL +G+ + TG + Sbjct: 121 GQLSDTRDVEPVLRRFELAFASALGYDFAWDRATDTGQS 159 >gi|189425855|ref|YP_001953032.1| DNA repair protein RecO [Geobacter lovleyi SZ] gi|189422114|gb|ACD96512.1| DNA repair protein RecO [Geobacter lovleyi SZ] Length = 209 Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 8/160 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 AIIL +YGE + I+ + T ++GR GF ++ ++ R + L+ N + V R Sbjct: 7 QAIILSTLNYGESDRIVSLFTLEHGRLRGFAKSARASRKRFGGQLEPANRLAVTLSLRED 66 Query: 64 QNLGEFRFEVLE-SHCAKLLSSSLFLYGLQS-IVPLFRFL-PEREPCLELYDMLNIFLNC 120 G R E +E S+C L L L L L PE P L+ +L+ Sbjct: 67 ---GLSRIERVEQSNCYPELRERLESLALALYACELVEALTPEGHPLPRLFRLLSTLFEH 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL 160 S E+ LL +G+ L + ++ L Sbjct: 124 LAGQSGSPTDRRFFEMNLLNILGYRPALDTAALQPLSDCL 163 >gi|83748441|ref|ZP_00945463.1| RecO [Ralstonia solanacearum UW551] gi|207743588|ref|YP_002259980.1| dna repair protein reco (recombination protein o) [Ralstonia solanacearum IPO1609] gi|83724852|gb|EAP72008.1| RecO [Ralstonia solanacearum UW551] gi|206594987|emb|CAQ61914.1| dna repair protein reco (recombination protein o) [Ralstonia solanacearum IPO1609] Length = 272 Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + ++ +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLELYDMLN 115 EV A+ + L L G L +F+ + L+ Sbjct: 101 ---------GEVKTLTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHAVLFSHYV 151 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 LN + E +LL+ GF L +C+ Sbjct: 152 DTLNKLAHGEPVAFTLRAFERVLLRETGFAAQLDRCI 188 >gi|297581083|ref|ZP_06943008.1| DNA repair protein recO [Vibrio cholerae RC385] gi|297534909|gb|EFH73745.1| DNA repair protein recO [Vibrio cholerae RC385] Length = 241 Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 61/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L C L+ L Sbjct: 65 -GSMK----TLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVACPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|229521286|ref|ZP_04410706.1| DNA recombination and repair protein RecO [Vibrio cholerae TM 11079-80] gi|229341818|gb|EEO06820.1| DNA recombination and repair protein RecO [Vibrio cholerae TM 11079-80] Length = 241 Score = 88.3 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 61/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L C L+ L Sbjct: 65 -GSMK----TLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVACPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|271501619|ref|YP_003334645.1| DNA repair protein RecO [Dickeya dadantii Ech586] gi|270345174|gb|ACZ77939.1| DNA repair protein RecO [Dickeya dadantii Ech586] Length = 244 Score = 87.9 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 8/160 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSENEGRVRVLAKGARARRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL-YDMLNI 116 W R + E + A LS SL GL L R L L +D L+ Sbjct: 60 WGGR-GEVKTLRNAEPVSL--ALPLSGSLLYSGLYVNELLTRVLELETNYSALFFDYLHC 116 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL+++G+G+D C +G Sbjct: 117 LQQLAGTNGSPEPALRRFELALLEHLGYGVDFLHCAGSGE 156 >gi|207725213|ref|YP_002255609.1| DNA repair protein RecO [Ralstonia solanacearum MolK2] gi|206590447|emb|CAQ37409.1| dna repair protein reco (recombination protein o) [Ralstonia solanacearum MolK2] Length = 272 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + ++ +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLELYDMLN 115 EV A+ + L L G L +F+ + L+ Sbjct: 101 ---------GEVKTLTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHAVLFSHYV 151 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 LN + E +LL+ GF L +C+ Sbjct: 152 DTLNKLAHGEPVAFTLRAFERVLLRETGFAAQLDRCI 188 >gi|254481220|ref|ZP_05094465.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2148] gi|214038383|gb|EEB79045.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2148] Length = 243 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 78/238 (32%), Gaps = 17/238 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-----PILQAGNLVRVNWRS 60 + IL R Y + ++ILEV ++GR V G R + +LQ + +++ Sbjct: 7 PSYILHSRPYRDSSLILEVFCAEHGRLS-LVSKGARRRSKGGSSVALLQPFIPLLLSFSG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R E +L LF G+ L R L +P +L+ L Sbjct: 66 RSEMKTLTH-VEPA-GVAPQLRGERLF-SGMYINELLMRLLHRHDPHPQLFANYGTALGE 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGAVCRSVGL 177 + + EL LL +G+G L + ++G SP G Sbjct: 123 LGDAEEVEVCLRRFELGLLDELGYGFSLAEDGLSGEAISEDGWYHFSPDCGLVAGVKGAN 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 P L + ++ A +L L +Y R+ F G+ Sbjct: 183 PARPA-YSGAELLLLSQGKYGGEARSVARRLMREVLAQYL----GSEPLKSRDLFHGR 235 >gi|134295166|ref|YP_001118901.1| DNA repair protein RecO [Burkholderia vietnamiensis G4] gi|134138323|gb|ABO54066.1| DNA replication and repair protein RecO [Burkholderia vietnamiensis G4] Length = 279 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 109 --------EVRTLTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLT 160 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 L ++ E +LL+ G+ + L + V Sbjct: 161 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVA 196 >gi|238784189|ref|ZP_04628202.1| DNA repair protein recO [Yersinia bercovieri ATCC 43970] gi|238714898|gb|EEQ06897.1| DNA repair protein recO [Yersinia bercovieri ATCC 43970] Length = 241 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 7/157 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWTG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + E + A LS S+ GL L R L + L+ L Sbjct: 63 R-GEVKTLRSAEPVSL--ALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHCLQS 119 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 + ++ EL +L ++G+G+D C +G Sbjct: 120 LAGSDGTPEYALRQFELAILAHLGYGVDFLHCAGSGQ 156 >gi|107022212|ref|YP_620539.1| DNA repair protein RecO [Burkholderia cenocepacia AU 1054] gi|116689158|ref|YP_834781.1| DNA repair protein RecO [Burkholderia cenocepacia HI2424] gi|170732446|ref|YP_001764393.1| DNA repair protein RecO [Burkholderia cenocepacia MC0-3] gi|254245909|ref|ZP_04939230.1| Recombination protein O, RecO [Burkholderia cenocepacia PC184] gi|119361448|sp|Q1BXT9|RECO_BURCA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|105892401|gb|ABF75566.1| DNA replication and repair protein RecO [Burkholderia cenocepacia AU 1054] gi|116647247|gb|ABK07888.1| DNA replication and repair protein RecO [Burkholderia cenocepacia HI2424] gi|124870685|gb|EAY62401.1| Recombination protein O, RecO [Burkholderia cenocepacia PC184] gi|169815688|gb|ACA90271.1| DNA repair protein RecO [Burkholderia cenocepacia MC0-3] Length = 278 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 49 PAFVLHSYPYRETSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 107 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 108 --------EVRTLTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLT 159 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 L ++ E +LL+ G+ + L + V Sbjct: 160 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVA 195 >gi|320155322|ref|YP_004187701.1| DNA recombination and repair protein RecO [Vibrio vulnificus MO6-24/O] gi|319930634|gb|ADV85498.1| DNA recombination and repair protein RecO [Vibrio vulnificus MO6-24/O] Length = 243 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + ++GR + +S R ++ LQ + + W + A Sbjct: 11 FVLHRRPYSESSLILDVFSEEFGRITLMSKGARSKRSNLKGALQPFTPLLLKWSGKGA-- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 + A+ +S L L G+ ++ R L + P L+ L Sbjct: 69 -------MKTLRQAEPISLGLPLTGIYLYSAMYVNELVGRVLMQEVPMPGLFHDYLFALT 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C TG Sbjct: 122 ELAQADNPEPALRRFELALLAAMGYGVDFLHCAGTGE 158 >gi|78224139|ref|YP_385886.1| recombination protein O, RecO [Geobacter metallireducens GS-15] gi|119361460|sp|Q39RG3|RECO_GEOMG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78195394|gb|ABB33161.1| DNA replication and repair protein RecO [Geobacter metallireducens GS-15] Length = 244 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 5/157 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 + +AI+L Y E + I+ + T QYG+ G + + + R P L+ + V R Sbjct: 5 RTEAIVLAAMDYRESDRIVTLFTLQYGKVRGVAKGAKRSARRFGPALEPFARIGVELVVR 64 Query: 62 LAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L R +++ + ++ + R+LP+ P L+ +L+ +L Sbjct: 65 --EGLSSLRGADIVTLYPGIRRDLRAIGLAGYAVELVDRYLPDGAPSPRLFRLLSSYLER 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + E L +G+ + L C GV Sbjct: 123 LDQGEPLPSDRRFFEANFLNILGYRISLDHCASCGVE 159 >gi|205353675|ref|YP_002227476.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690509|sp|B5RD47|RECO_SALG2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|205273456|emb|CAR38433.1| DNA repair protein recO [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628779|gb|EGE35122.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 242 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|323526857|ref|YP_004229010.1| DNA repair protein RecO [Burkholderia sp. CCGE1001] gi|323383859|gb|ADX55950.1| DNA repair protein RecO [Burkholderia sp. CCGE1001] Length = 306 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + ++W + Sbjct: 77 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKS- 135 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P +L+ + Sbjct: 136 --------EVRTLTGAEWVGGMLPLTGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVT 187 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 + ++ E +LL+ G+ + L + V Sbjct: 188 MTRLAHDEPPVQVLRSFERVLLRETGYAMSLDRTVA 223 >gi|206559400|ref|YP_002230161.1| DNA repair protein RecO [Burkholderia cenocepacia J2315] gi|206561198|ref|YP_002231963.1| DNA repair protein RecO [Burkholderia cenocepacia J2315] gi|198035438|emb|CAR51314.1| DNA repair protein RecO 2 [Burkholderia cenocepacia J2315] gi|198037240|emb|CAR53162.1| DNA repair protein RecO 1 [Burkholderia cenocepacia J2315] Length = 278 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 49 PAFVLHSYPYRETSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 107 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P L++ + Sbjct: 108 --------EVRTLTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLT 159 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 L ++ E +LL+ G+ + L + V Sbjct: 160 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVA 195 >gi|1228148|gb|AAA92442.1| RecO [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 241 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|168238324|ref|ZP_02663382.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194738093|ref|YP_002115642.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238693669|sp|B4TS12|RECO_SALSV RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194713595|gb|ACF92816.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288836|gb|EDY28209.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|322613349|gb|EFY10291.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620447|gb|EFY17312.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625085|gb|EFY21914.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629471|gb|EFY26247.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633858|gb|EFY30597.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635464|gb|EFY32175.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639860|gb|EFY36539.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644254|gb|EFY40798.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649946|gb|EFY46366.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654871|gb|EFY51188.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658201|gb|EFY54467.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661727|gb|EFY57945.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669708|gb|EFY65854.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673285|gb|EFY69390.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674926|gb|EFY71013.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682949|gb|EFY78967.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685610|gb|EFY81605.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191962|gb|EFZ77200.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200405|gb|EFZ85486.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201305|gb|EFZ86372.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208375|gb|EFZ93315.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211549|gb|EFZ96387.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215981|gb|EGA00713.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221762|gb|EGA06170.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225630|gb|EGA09857.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229348|gb|EGA13472.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235337|gb|EGA19421.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237477|gb|EGA21540.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245232|gb|EGA29233.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248806|gb|EGA32733.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254014|gb|EGA37835.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259062|gb|EGA42710.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323267768|gb|EGA51249.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269673|gb|EGA53125.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 242 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|323499983|ref|ZP_08104939.1| DNA repair protein RecO [Vibrio sinaloensis DSM 21326] gi|323314949|gb|EGA68004.1| DNA repair protein RecO [Vibrio sinaloensis DSM 21326] Length = 240 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + ++GR + +S R ++ LQ + + W Sbjct: 10 FVLHRRPYSESSLILDVFSEEFGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGN---- 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L+G+ ++ R L P L+ L Sbjct: 66 -GSMK----TLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C TG Sbjct: 121 ELAQSDNPEPALRRFELALLSAMGYGVDFMHCAGTGE 157 >gi|168821431|ref|ZP_02833431.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342020|gb|EDZ28784.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320087080|emb|CBY96849.1| DNA repair protein recO Recombination protein O [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 242 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|240949698|ref|ZP_04754033.1| DNA repair protein RecO [Actinobacillus minor NM305] gi|240295956|gb|EER46632.1| DNA repair protein RecO [Actinobacillus minor NM305] Length = 241 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ +L R Y E ++++++ T YGR + + R ++ +LQ + + W Sbjct: 5 QWQ-RGFVLHKREYSETSLLVDLFTENYGRITLLAKGARRPRSPLKALLQPFTPLLLRWS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKL---LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + G+ + + + A L +++ G L R L + EL+ Sbjct: 64 GK-----GDLKV-LTKVEAAALTLPMNTKALYSGFYINEVLVRVLENQTAYQELFHHYLQ 117 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQD 159 + + S + ++ E +LK +G+G+D T C+ TG+ D Sbjct: 118 CVTHLALRSEELEPILRTFEFHVLKALGYGVDFTHCMATGLEVD 161 >gi|91784705|ref|YP_559911.1| DNA repair protein RecO [Burkholderia xenovorans LB400] gi|91688659|gb|ABE31859.1| DNA replication and repair protein RecO [Burkholderia xenovorans LB400] Length = 306 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + ++W + Sbjct: 77 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKS- 135 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P +L+ + Sbjct: 136 --------EVRTLTGAEWVGGMLPLTGGALLCGFYVNELLVKFCAREDPHPQLFHHYVVT 187 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 + ++ E +LL+ G+ + L + V Sbjct: 188 MTRLAHDEPPVQVLRSFERVLLRETGYAMALDRTVA 223 >gi|238796737|ref|ZP_04640243.1| DNA repair protein recO [Yersinia mollaretii ATCC 43969] gi|238719468|gb|EEQ11278.1| DNA repair protein recO [Yersinia mollaretii ATCC 43969] Length = 241 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 7/157 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R ++ LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + E + A LS S+ GL L R L + L+ L Sbjct: 63 R-GEVKTLRSAEPVSL--ALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHCLQS 119 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 + ++ EL +L ++G+G+D C +G Sbjct: 120 LAGSDGTPEYALRQFELAILAHLGYGVDFLHCSGSGQ 156 >gi|330815988|ref|YP_004359693.1| DNA repair protein RecO [Burkholderia gladioli BSR3] gi|327368381|gb|AEA59737.1| DNA repair protein RecO [Burkholderia gladioli BSR3] Length = 295 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 57/153 (37%), Gaps = 17/153 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 66 PGFVLHSYPYRETSLIIDVLTRDHGRVALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS- 124 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 E+ A+ + L L G + L +F +P L+ + Sbjct: 125 --------EMRTLTGAEWVGGMLPLGGDALLCGFYVNELLVKFCAREDPFPPLFQHYLVT 176 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L ++ E +LL+ G+ L + Sbjct: 177 LARLAHDEPAVQVLRSFERVLLRETGYARALNR 209 >gi|311031642|ref|ZP_07709732.1| DNA repair protein RecO [Bacillus sp. m3-13] Length = 258 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 5/178 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + + I++ +YGE N I+ + +++ G+ R S R + Q + + Sbjct: 1 MLHKCEGIVIRTNAYGENNKIVTIYSKELGKVGVMARGANKPSSRFTAVSQLFSHATFVF 60 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R + LG + E+++S + L Y + + R E + LYD+L Sbjct: 61 Q-R-STGLGSLQQGEIMDSMRSIREDIFLTAYASFIVELMDRTTDEGKRNPALYDLLYQV 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + E+ + IG +L +C G T+ S K GG +C Sbjct: 119 LHYINDGFDAEILTFIFEMKMCDVIGITPELNRCASCGATEGSFAFSIKEGGFLCNRC 176 >gi|207857986|ref|YP_002244637.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690389|sp|B5QTU6|RECO_SALEP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|206709789|emb|CAR34141.1| DNA repair protein recO [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 242 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|16761491|ref|NP_457108.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765899|ref|NP_461514.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140812|ref|NP_804154.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412545|ref|YP_149620.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181144|ref|YP_217561.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161612651|ref|YP_001586616.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549389|ref|ZP_02343148.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992710|ref|ZP_02573806.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168243369|ref|ZP_02668301.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194446629|ref|YP_002041842.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451401|ref|YP_002046641.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197248854|ref|YP_002147537.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265533|ref|ZP_03165607.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361480|ref|YP_002141116.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204929727|ref|ZP_03220801.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213425278|ref|ZP_03358028.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583125|ref|ZP_03364951.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213646355|ref|ZP_03376408.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582879|ref|YP_002636677.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912697|ref|ZP_04656534.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289804219|ref|ZP_06534848.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289825503|ref|ZP_06544710.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61230222|sp|P0A285|RECO_SALTY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61230223|sp|P0A286|RECO_SALTI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|62287383|sp|Q5PIG3|RECO_SALPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|75481600|sp|Q57LD2|RECO_SALCH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189039772|sp|A9N1T3|RECO_SALPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238689917|sp|B5BAT2|RECO_SALPK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238690022|sp|B5F1F9|RECO_SALA4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238690622|sp|B4TE13|RECO_SALHS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238693589|sp|B4T1F6|RECO_SALNS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|25300564|pir||AI0828 DNA repair protein RecO [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421126|gb|AAL21473.1| gap repair gene [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503791|emb|CAD02781.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi] gi|29136437|gb|AAO68003.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56126802|gb|AAV76308.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128777|gb|AAX66480.1| gap repair gene [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362015|gb|ABX65783.1| hypothetical protein SPAB_00347 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405292|gb|ACF65514.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409705|gb|ACF69924.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197092956|emb|CAR58386.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212557|gb|ACH49954.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243788|gb|EDY26408.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204321446|gb|EDZ06646.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325288|gb|EDZ13127.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329107|gb|EDZ15871.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205337667|gb|EDZ24431.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|224467406|gb|ACN45236.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247774|emb|CBG25602.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994705|gb|ACY89590.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159127|emb|CBW18641.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913568|dbj|BAJ37542.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222716|gb|EFX47787.1| DNA recombination and repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322715634|gb|EFZ07205.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130910|gb|ADX18340.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989506|gb|AEF08489.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 242 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|261867311|ref|YP_003255233.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412643|gb|ACX82014.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D11S-1] Length = 228 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 10/154 (6%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNL 66 +L +SY E +++++++T +GR + ++ R ++ +LQ + + W R Sbjct: 1 MLHRKSYSETSLLIDLLTEDFGRISVLAKGARAKRSMLKGVLQPFTPLLLRWSGR----- 55 Query: 67 GEFRFEVLESHCAKLL-SSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK-I 123 GE + A L ++ LY G L R L +L+ L Sbjct: 56 GELKILTKAEPAAIALPLQNIALYSGFYLNELLCRVLEPETAYPQLFQQYLQCLTQLAMN 115 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + E LL+ +G+G+D T C +G T Sbjct: 116 QQQVEPALRTFEFQLLRTLGYGIDFTHCAGSGNT 149 >gi|168466660|ref|ZP_02700514.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630758|gb|EDX49350.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 242 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGKRVD 159 >gi|168261370|ref|ZP_02683343.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|200388266|ref|ZP_03214878.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605364|gb|EDZ03909.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205349603|gb|EDZ36234.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 242 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|167854944|ref|ZP_02477719.1| DNA repair protein RecO [Haemophilus parasuis 29755] gi|167853901|gb|EDS25140.1| DNA repair protein RecO [Haemophilus parasuis 29755] Length = 239 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 59/168 (35%), Gaps = 12/168 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ +L R Y E +++++ T +GR + + R ++ +LQ + + W Sbjct: 4 QWQ-RGFVLHRREYSESSLLVDFFTENHGRITLLAKGVRRPRSPLKSVLQPFTPLLLKWT 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L EL+ + Sbjct: 63 GK-GDLKTLTKAEPASLTLP--MQTLALYSGFYVNEVLARVLENHTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 P+ I I E LK +G+G+D C TG V PK Sbjct: 120 KLASQPNEIEPILRTFEFQTLKALGYGVDFCHCAATGKP-----VDPK 162 >gi|119361452|sp|Q13VN0|RECO_BURXL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 299 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + ++ +LQ + ++W + Sbjct: 70 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKS- 128 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F +P +L+ + Sbjct: 129 --------EVRTLTGAEWVGGMLPLTGGALLCGFYVNELLVKFCAREDPHPQLFHHYVVT 180 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 + ++ E +LL+ G+ + L + V Sbjct: 181 MTRLAHDEPPVQVLRSFERVLLRETGYAMALDRTVA 216 >gi|14195092|sp|P57974|RECO_PASMU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 240 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 65/167 (38%), Gaps = 11/167 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ +L ++Y E ++++E+ T + GR + ++ R ++ ILQ + + W Sbjct: 7 NWQ-RGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLRWS 65 Query: 60 SRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLNIF 117 R L E + A L + G L R L L+ D L Sbjct: 66 GRSE--LKTLTKVEP--AAIALPLQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLRCL 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 +I E LL+ +G+G+D C +G V +++ + Sbjct: 122 TGLASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDENMTY 168 >gi|219870404|ref|YP_002474779.1| DNA repair protein RecO [Haemophilus parasuis SH0165] gi|254764635|sp|B8F3C9|RECO_HAEPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219690608|gb|ACL31831.1| recombinational DNA repair protein (RecF pathway) [Haemophilus parasuis SH0165] Length = 239 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 59/168 (35%), Gaps = 12/168 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ +L R Y E +++++ T +GR + + R ++ +LQ + + W Sbjct: 4 QWQ-RGFVLHRREYSESSLLVDFFTENHGRITLLAKGVRRPRSPLKSVLQPFTPLLLKWT 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E + + G L R L EL+ + Sbjct: 63 GK-GDLKTLTKAEPASLTLP--MQTLALYSGFYVNEVLARVLENHTAYPELFQHYLHCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 P+ I I E LK +G+G+D C TG V PK Sbjct: 120 KLASQPNEIEPILRTFEFQTLKALGYGVDFCHCAATGKP-----VDPK 162 >gi|257464704|ref|ZP_05629075.1| DNA repair protein RecO [Actinobacillus minor 202] gi|257450364|gb|EEV24407.1| DNA repair protein RecO [Actinobacillus minor 202] Length = 241 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ +L R Y E ++++++ T YGR + + R ++ +LQ + + W Sbjct: 5 QWQ-RGFVLHKREYSETSLLVDLFTENYGRITLLAKGARRPRSPLKALLQPFTPLLLRWS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKL---LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + G+ + + + A L +++ G L R L + EL+ Sbjct: 64 GK-----GDLKV-LTKVEAAALTLPMNTKALYSGFYINEVLVRVLENQTAYQELFHHYLQ 117 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQD 159 + + S + ++ E +LK +G+G+D T C+ TG+ D Sbjct: 118 CVTHLALRSEELEPILRTFEFHVLKALGYGVDFTHCMATGLDVD 161 >gi|289578135|ref|YP_003476762.1| DNA repair protein RecO [Thermoanaerobacter italicus Ab9] gi|289527848|gb|ADD02200.1| DNA repair protein RecO [Thermoanaerobacter italicus Ab9] Length = 248 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNW 58 + +AI+L S GE + + + T+ YG+ + + + + + N V Sbjct: 5 KTEAIVLKNNSIGETDKMATLFTKNYGKLRAVAKGARRSKSRFVNAIRPFMVANYVIF-- 62 Query: 59 RSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM 113 + + E++ESH K + L + + S + + + L E + +LY Sbjct: 63 -----EGQNYYYIDQWELIESH--KNIEKDLVKFSVASYISETVNKILEENQKSEKLYQF 115 Query: 114 LNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + IF+ L L+ +G+ L C+V G +DL + S GG VC Sbjct: 116 LKHSFKAVDELQIDPLIFIASYNLKLVSLLGYMPQLDNCIVCGKREDLKYFSNSCGGVVC 175 >gi|327484951|gb|AEA79358.1| DNA recombination and repair protein RecO [Vibrio cholerae LMA3894-4] Length = 241 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVSLMAKGARGKRSNLKGALQPFTPLLLKWSGNSS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 + A+ +S L L G+ + R L L+ L Sbjct: 67 -------MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|15603732|ref|NP_246806.1| DNA repair protein RecO [Pasteurella multocida subsp. multocida str. Pm70] gi|12722295|gb|AAK03951.1| RecO [Pasteurella multocida subsp. multocida str. Pm70] Length = 236 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 12/169 (7%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ +L ++Y E ++++E+ T + GR + ++ R ++ ILQ + + Sbjct: 1 MENWQ-RGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLN 115 W R L E + A L + G L R L L+ D L Sbjct: 60 WSGRSE--LKTLTKVEP--AAIALPLQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLR 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 +I E LL+ +G+G+D C +G V +++ + Sbjct: 116 CLTGLASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDENMTY 164 >gi|218710567|ref|YP_002418188.1| DNA repair protein RecO [Vibrio splendidus LGP32] gi|254790741|sp|B7VK77|RECO_VIBSL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218323586|emb|CAV19825.1| DNA repair protein recO [Vibrio splendidus LGP32] Length = 242 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 58/160 (36%), Gaps = 17/160 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ ++ R L + L Sbjct: 65 -GSMK----TLRQAEPISLGLPLAGINLYSAMYVNELVGRVLMAEVAMPAFFHDYLHALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + EL LL +G+G+D C TG D Sbjct: 120 ELAHNENPEPALRRFELALLSAMGYGVDFLHCAGTGEAID 159 >gi|312173246|emb|CBX81501.1| DNA repair protein recO (Recombination protein O) [Erwinia amylovora ATCC BAA-2158] Length = 245 Score = 86.7 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 19/164 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + Q GR + +S R ++ LQ + V W Sbjct: 4 WQ-RAFVLHGRPWSETSLLLDLFSEQCGRVRVLAKGARSKRSSLKGALQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDML 114 R EV A+ +S +L L G L+ R L EL+ Sbjct: 63 R---------GEVKTLRAAEPVSLALPLSGTTLYCGLYVNELLSRVLQHETAFSELFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + S + + EL +L ++G+G+D C +G Sbjct: 114 LQCIQTLAADSGSPEPALRRFELSMLGHLGYGVDFLHCAGSGEE 157 >gi|254252843|ref|ZP_04946161.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia dolosa AUO158] gi|124895452|gb|EAY69332.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia dolosa AUO158] Length = 278 Score = 86.7 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 19/173 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + ++ +LQ + ++W + Sbjct: 49 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKS- 107 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ + L L G + L +F + L++ + Sbjct: 108 --------EVRTLTGAEWVGGMLPLGGDALLCGFYANELLVKFCAREDSQPPLFNHYVLT 159 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 L ++ E +LL+ G+ + L + V + D +V P+ G Sbjct: 160 LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERG 212 >gi|229514085|ref|ZP_04403547.1| DNA recombination and repair protein RecO [Vibrio cholerae TMA 21] gi|229349266|gb|EEO14223.1| DNA recombination and repair protein RecO [Vibrio cholerae TMA 21] Length = 241 Score = 86.3 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNSS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 + A+ +S L L G+ + R L L+ L Sbjct: 67 -------MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|229524446|ref|ZP_04413851.1| DNA recombination and repair protein RecO [Vibrio cholerae bv. albensis VL426] gi|262190711|ref|ZP_06048942.1| DNA recombination and repair protein RecO [Vibrio cholerae CT 5369-93] gi|229338027|gb|EEO03044.1| DNA recombination and repair protein RecO [Vibrio cholerae bv. albensis VL426] gi|262033423|gb|EEY51930.1| DNA recombination and repair protein RecO [Vibrio cholerae CT 5369-93] Length = 241 Score = 86.3 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNSS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 + A+ +S L L G+ + R L L+ L Sbjct: 67 -------MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|260913269|ref|ZP_05919751.1| recombination protein O [Pasteurella dagmatis ATCC 43325] gi|260632856|gb|EEX51025.1| recombination protein O [Pasteurella dagmatis ATCC 43325] Length = 237 Score = 86.3 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 11/163 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ +L ++Y E ++++++ T + GR + ++ R ++ +LQ + + W Sbjct: 4 NWQ-RGFVLHRKAYSETSLLVDLFTEESGRLTVIAKGARAKRSSLKSVLQPFTPLLLRWT 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLL-SSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIF 117 + GE + A L LY G L R L +L+ Sbjct: 63 GK-----GELKTLTKAEPAAIALPLQHTALYSGFYVNELLSRVLEPETAYPQLFQNYLRC 117 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQD 159 L + + +++ E LL +G+G+D C +G D Sbjct: 118 LTGLASNTQQVEPYLRHFEFELLHTLGYGVDFCHCAGSGKIVD 160 >gi|213161853|ref|ZP_03347563.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 221 Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|33152640|ref|NP_873993.1| DNA repair protein RecO [Haemophilus ducreyi 35000HP] gi|42559454|sp|Q7VL77|RECO_HAEDU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|33148864|gb|AAP96382.1| DNA repair protein RecO [Haemophilus ducreyi 35000HP] Length = 240 Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 7/158 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 WQ +L R Y E +++++ T Q+GR + + R ++ +LQ + + W Sbjct: 4 QWQ-RGFVLHRREYRETSLLVDFFTEQHGRITLLAKGAKRVRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLNIFL 118 + + E + + GL L R L + L+ L Sbjct: 63 GK-GDLKVLTKAEPAALTLP--MHHTALYSGLYVNEILIRVLENQTAYTALFQHYLQCIT 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 P + E LLK +G+G++ + C TG Sbjct: 120 QLATQPEKLQVTLRTFEFHLLKALGYGVNFSICAATGQ 157 >gi|297544410|ref|YP_003676712.1| DNA repair protein RecO [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842185|gb|ADH60701.1| DNA repair protein RecO [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 248 Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNW 58 + +AI+L S GE + + + T+ YG+ + + + + + N V Sbjct: 5 KTEAIVLKNNSIGETDKMATLFTKNYGKLRAVAKGARRSKSRFVNAIRPFMVANYVIF-- 62 Query: 59 RSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDM 113 + + E++ESH K + L + + S + + + L E + +LY Sbjct: 63 -----EGQNYYYIDQWELIESH--KNIEKDLVKFSVASYISETVNKILEENQKSEKLYQF 115 Query: 114 LNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + IF+ L L+ +G+ L C+V G +DL + S GG VC Sbjct: 116 LKHSFKAVNELQIDPLIFIVSYNLKLVSLLGYMPQLDNCIVCGKREDLKYFSNSCGGVVC 175 >gi|153826906|ref|ZP_01979573.1| DNA repair protein RecO [Vibrio cholerae MZO-2] gi|229527067|ref|ZP_04416462.1| DNA recombination and repair protein RecO [Vibrio cholerae 12129(1)] gi|254291659|ref|ZP_04962447.1| DNA repair protein RecO [Vibrio cholerae AM-19226] gi|149739269|gb|EDM53531.1| DNA repair protein RecO [Vibrio cholerae MZO-2] gi|150422431|gb|EDN14390.1| DNA repair protein RecO [Vibrio cholerae AM-19226] gi|229335464|gb|EEO00946.1| DNA recombination and repair protein RecO [Vibrio cholerae 12129(1)] Length = 241 Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVSLMAKGARGKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L L+ L Sbjct: 65 -GSMK----TLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|153803097|ref|ZP_01957683.1| DNA repair protein RecO [Vibrio cholerae MZO-3] gi|153830872|ref|ZP_01983539.1| DNA repair protein RecO [Vibrio cholerae 623-39] gi|124121379|gb|EAY40122.1| DNA repair protein RecO [Vibrio cholerae MZO-3] gi|148873641|gb|EDL71776.1| DNA repair protein RecO [Vibrio cholerae 623-39] Length = 241 Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVSLMAKGARGKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L L+ L Sbjct: 65 -GSMK----TLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|27364936|ref|NP_760464.1| DNA repair protein RecO [Vibrio vulnificus CMCP6] gi|31340326|sp|Q8DC74|RECO_VIBVU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|27361082|gb|AAO09991.1| DNA repair protein RecO [Vibrio vulnificus CMCP6] Length = 243 Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL++ + ++GR + +S R ++ LQ + + W + A Sbjct: 11 FVLHRRPYSESSLILDIFSEEFGRITLMSKGARSKRSNLKGALQPFTPLLLKWSGKGA-- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 + A+ +S L L G+ L+ R L + L+ L Sbjct: 69 -------MKTLRQAEPISLGLPLTGINLYSALYVNELIGRVLMQEVSMPGLFHDYLFALT 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C TG Sbjct: 122 ELAQADNPEPALRRFELALLAAMGYGVDFLHCAGTGE 158 >gi|241662607|ref|YP_002980967.1| DNA repair protein RecO [Ralstonia pickettii 12D] gi|309781189|ref|ZP_07675926.1| DNA repair protein RecO [Ralstonia sp. 5_7_47FAA] gi|240864634|gb|ACS62295.1| DNA repair protein RecO [Ralstonia pickettii 12D] gi|308920010|gb|EFP65670.1| DNA repair protein RecO [Ralstonia sp. 5_7_47FAA] Length = 273 Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 5/149 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V T YGR + + ++ +LQ + ++W R Sbjct: 43 PAFVLHSYPYRETSLIIDVFTPDYGRMALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGD 102 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 R E + L L G L +F+ + L+ LN Sbjct: 103 VRTLT-RAEWVGGMLP--LGGEGLLSGFYLNELLVKFVAREDGHPVLFAHYVETLNKLAH 159 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 E +LL+ GF L +C+ Sbjct: 160 GEPAAFTLRAFERVLLRETGFAAQLDRCI 188 >gi|237732551|ref|ZP_04563032.1| DNA repair protein recO [Citrobacter sp. 30_2] gi|226908090|gb|EEH94008.1| DNA repair protein recO [Citrobacter sp. 30_2] Length = 236 Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLVLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L L+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELISRVLEYETRFSALF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G+D T C +G Sbjct: 111 FDYLNCIQALAGATGSPEPALRRFELALLGHLGYGVDFTHCAGSGE 156 >gi|254507488|ref|ZP_05119622.1| DNA repair protein RecO [Vibrio parahaemolyticus 16] gi|219549558|gb|EED26549.1| DNA repair protein RecO [Vibrio parahaemolyticus 16] Length = 247 Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W Sbjct: 16 FVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGN---- 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ ++ R L P L+ L Sbjct: 72 -GSMK----TLRQAEPISLGLPLTGINLYSGMYVNELIGRVLMAEVPMPALFHDYLHVLT 126 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C +G Sbjct: 127 ELAQCDNPEPALRRFELALLSAMGYGVDFLHCAGSGE 163 >gi|150390774|ref|YP_001320823.1| DNA repair protein RecO [Alkaliphilus metalliredigens QYMF] gi|172052484|sp|A6TSJ6|RECO_ALKMQ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|149950636|gb|ABR49164.1| DNA repair protein RecO [Alkaliphilus metalliredigens QYMF] Length = 246 Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 15/184 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVR-VN 57 M + + +L R YGE + +L + T++ G+ + + + + +Q + V Sbjct: 1 MLIKTEGFVLRNRKYGETDSMLVIFTKKVGKINAIAKGARRTKSALLAGVQPFSYSDFVL 60 Query: 58 WRSRLAQNLGEFRF---EVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDM 113 ++ R + E E L L Y + + E + L+++ Sbjct: 61 FKGRS-----LYTVNQTEPKE-IFYNLREDVKRLSYAAYLLELVESVTEEGQTNNRLFNL 114 Query: 114 LNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLW-VSPKSGGAV 171 L L+ K + + ++ EL L++ G LT CV G T W S K GG + Sbjct: 115 LGRTLHLMKKEEIELETILRAFELKLMEYSGLKPHLTSCVSCGQTSSNSWRFSSKEGGLI 174 Query: 172 CRSV 175 C Sbjct: 175 CHQC 178 >gi|145632581|ref|ZP_01788315.1| DNA repair protein RecO [Haemophilus influenzae 3655] gi|144986776|gb|EDJ93328.1| DNA repair protein RecO [Haemophilus influenzae 3655] Length = 236 Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 7/153 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + A Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKSA- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E L + LY G L R + P L+ L Sbjct: 67 ---LKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 S + E LL+ +G+G+D C +G Sbjct: 124 ESNVEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|187928025|ref|YP_001898512.1| DNA repair protein RecO [Ralstonia pickettii 12J] gi|187724915|gb|ACD26080.1| DNA repair protein RecO [Ralstonia pickettii 12J] Length = 273 Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 5/149 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V T YGR + + ++ +LQ + ++W R Sbjct: 43 PAFVLHSYPYRETSLIIDVFTPDYGRMALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGD 102 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 R E + L L G L +F+ + L+ LN Sbjct: 103 VRTLT-RAEWVGGMLP--LGGEGLLSGFYLNELLVKFVAREDGHPVLFAHYVETLNKLAH 159 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 E +LL+ GF L +C+ Sbjct: 160 GEPAAFTLRAFERVLLRETGFAAQLDRCI 188 >gi|15642455|ref|NP_232088.1| DNA repair protein RecO [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590991|ref|ZP_01678310.1| DNA repair protein RecO [Vibrio cholerae 2740-80] gi|121728978|ref|ZP_01681982.1| DNA repair protein RecO [Vibrio cholerae V52] gi|147673381|ref|YP_001217961.1| DNA repair protein RecO [Vibrio cholerae O395] gi|153214505|ref|ZP_01949414.1| DNA repair protein RecO [Vibrio cholerae 1587] gi|227082580|ref|YP_002811131.1| DNA repair protein RecO [Vibrio cholerae M66-2] gi|229507481|ref|ZP_04396986.1| DNA recombination and repair protein RecO [Vibrio cholerae BX 330286] gi|229512324|ref|ZP_04401803.1| DNA recombination and repair protein RecO [Vibrio cholerae B33] gi|229519460|ref|ZP_04408903.1| DNA recombination and repair protein RecO [Vibrio cholerae RC9] gi|229606986|ref|YP_002877634.1| DNA repair protein RecO [Vibrio cholerae MJ-1236] gi|254226244|ref|ZP_04919837.1| DNA repair protein RecO [Vibrio cholerae V51] gi|254849584|ref|ZP_05238934.1| DNA repair protein recO [Vibrio cholerae MO10] gi|255746870|ref|ZP_05420815.1| DNA recombination and repair protein RecO [Vibrio cholera CIRS 101] gi|258622343|ref|ZP_05717368.1| DNA repair protein recO [Vibrio mimicus VM573] gi|258626727|ref|ZP_05721549.1| DNA repair protein recO [Vibrio mimicus VM603] gi|261211553|ref|ZP_05925841.1| DNA recombination and repair protein RecO [Vibrio sp. RC341] gi|262162035|ref|ZP_06031051.1| DNA recombination and repair protein RecO [Vibrio cholerae INDRE 91/1] gi|262167290|ref|ZP_06035000.1| DNA recombination and repair protein RecO [Vibrio cholerae RC27] gi|262170592|ref|ZP_06038270.1| DNA recombination and repair protein RecO [Vibrio mimicus MB-451] gi|298500184|ref|ZP_07009989.1| DNA repair protein RecO [Vibrio cholerae MAK 757] gi|20139781|sp|Q9KPB4|RECO_VIBCH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|172047581|sp|A5F5H6|RECO_VIBC3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790740|sp|C3LR02|RECO_VIBCM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|9657037|gb|AAF95601.1| DNA repair protein RecO [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547168|gb|EAX57297.1| DNA repair protein RecO [Vibrio cholerae 2740-80] gi|121628744|gb|EAX61211.1| DNA repair protein RecO [Vibrio cholerae V52] gi|124115307|gb|EAY34127.1| DNA repair protein RecO [Vibrio cholerae 1587] gi|125621217|gb|EAZ49558.1| DNA repair protein RecO [Vibrio cholerae V51] gi|146315264|gb|ABQ19803.1| DNA repair protein RecO [Vibrio cholerae O395] gi|227010468|gb|ACP06680.1| DNA repair protein RecO [Vibrio cholerae M66-2] gi|227014351|gb|ACP10561.1| DNA repair protein RecO [Vibrio cholerae O395] gi|229344149|gb|EEO09124.1| DNA recombination and repair protein RecO [Vibrio cholerae RC9] gi|229352289|gb|EEO17230.1| DNA recombination and repair protein RecO [Vibrio cholerae B33] gi|229354986|gb|EEO19907.1| DNA recombination and repair protein RecO [Vibrio cholerae BX 330286] gi|229369641|gb|ACQ60064.1| DNA recombination and repair protein RecO [Vibrio cholerae MJ-1236] gi|254845289|gb|EET23703.1| DNA repair protein recO [Vibrio cholerae MO10] gi|255735272|gb|EET90672.1| DNA recombination and repair protein RecO [Vibrio cholera CIRS 101] gi|258580983|gb|EEW05910.1| DNA repair protein recO [Vibrio mimicus VM603] gi|258585359|gb|EEW10083.1| DNA repair protein recO [Vibrio mimicus VM573] gi|260839508|gb|EEX66134.1| DNA recombination and repair protein RecO [Vibrio sp. RC341] gi|261891668|gb|EEY37654.1| DNA recombination and repair protein RecO [Vibrio mimicus MB-451] gi|262024265|gb|EEY42956.1| DNA recombination and repair protein RecO [Vibrio cholerae RC27] gi|262028284|gb|EEY46941.1| DNA recombination and repair protein RecO [Vibrio cholerae INDRE 91/1] gi|297540877|gb|EFH76931.1| DNA repair protein RecO [Vibrio cholerae MAK 757] Length = 241 Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L L+ L Sbjct: 65 -GSMK----TLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|292489088|ref|YP_003531975.1| DNA repair protein RecO [Erwinia amylovora CFBP1430] gi|292900212|ref|YP_003539581.1| DNA repair protein [Erwinia amylovora ATCC 49946] gi|291200060|emb|CBJ47186.1| DNA repair protein [Erwinia amylovora ATCC 49946] gi|291554522|emb|CBA22090.1| DNA repair protein recO (Recombination protein O) [Erwinia amylovora CFBP1430] Length = 245 Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 19/164 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + Q GR + +S R ++ LQ + V W Sbjct: 4 WQ-RAFVLHGRPWSETSLLLDLFSEQCGRVRVLAKGARSKRSSLKGALQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDML 114 R EV A+ +S +L L G L+ R L EL+ Sbjct: 63 R---------GEVKTLRAAEPVSLALPLSGTTLYCGLYVNELLSRVLQHETAFNELFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + S + + EL +L ++G+G+D C +G Sbjct: 114 LQCIQTLAADSGSPEPALRRFELSMLGHLGYGVDFLHCAGSGEE 157 >gi|153824252|ref|ZP_01976919.1| DNA repair protein RecO [Vibrio cholerae B33] gi|126518226|gb|EAZ75451.1| DNA repair protein RecO [Vibrio cholerae B33] Length = 160 Score = 85.2 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L L+ L Sbjct: 65 -GSMK----TLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|152971421|ref|YP_001336530.1| DNA repair protein RecO [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896016|ref|YP_002920752.1| DNA repair protein RecO [Klebsiella pneumoniae NTUH-K2044] gi|166221895|sp|A6TCH9|RECO_KLEP7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150956270|gb|ABR78300.1| DNA repair protein RecO [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548334|dbj|BAH64685.1| DNA repair protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 245 Score = 85.2 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L+V T + GR + +S R ++ LQ + V + Sbjct: 4 WQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRFGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDML 114 R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 63 R---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + S + + EL LL ++G+G+D C +G Sbjct: 114 LHCIQALAGASGSPEPALRRFELALLGHLGYGVDFLHCAGSGE 156 >gi|291085017|ref|ZP_06351784.2| DNA repair protein RecO [Citrobacter youngae ATCC 29220] gi|291071662|gb|EFE09771.1| DNA repair protein RecO [Citrobacter youngae ATCC 29220] Length = 237 Score = 85.2 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLVLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 61 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELISRVLEYETRFSELF 111 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + + + EL LL ++G+G+D C +G D Sbjct: 112 FDYLNCIQALAGATGSPEPALRRFELALLGHLGYGVDFLHCAGSGDEVD 160 >gi|297584642|ref|YP_003700422.1| DNA repair protein RecO [Bacillus selenitireducens MLS10] gi|297143099|gb|ADH99856.1| DNA repair protein RecO [Bacillus selenitireducens MLS10] Length = 256 Score = 85.2 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 72/193 (37%), Gaps = 5/193 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + + I++ YGE N ++ V +++ G+ R + R Q + Sbjct: 1 MLHRVEGIVIRANDYGENNKVVTVYSKEQGKVALMARGAKKPGSRFAASTQLFVQAVFVY 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R +G +++ES + L YG I + R + + P +LY+ L Sbjct: 61 H-RQH-GMGSLNAADLIESFISVRKDVLLTTYGACMIELIDRLVEDHIPDGQLYETLYQL 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + +E+ +L+ G L +C G + S GGA+C+ Sbjct: 119 LRRLDEGDDPAVLLAIMEVKMLRYAGVDPVLHQCASCGSVELPFQFSMTYGGALCKRCLH 178 Query: 178 PYAEKMLVLPSFL 190 + V P+ + Sbjct: 179 KDHHVVYVNPAVM 191 >gi|262166500|ref|ZP_06034237.1| DNA recombination and repair protein RecO [Vibrio mimicus VM223] gi|262026216|gb|EEY44884.1| DNA recombination and repair protein RecO [Vibrio mimicus VM223] Length = 241 Score = 85.2 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 61/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L L+ L Sbjct: 65 -GSMK----TLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVATPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL ++G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLASMGYGVDFLHCAGTGEP-----VSP 160 >gi|152977879|ref|YP_001343508.1| DNA repair protein RecO [Actinobacillus succinogenes 130Z] gi|171472920|sp|A6VKS6|RECO_ACTSZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150839602|gb|ABR73573.1| DNA repair protein RecO [Actinobacillus succinogenes 130Z] Length = 237 Score = 85.2 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L + Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 9 GFVLHRKPYSETSLLVDLFTEETGRLTVLAKGARAKRSAWKGVLQPFTPLLLRWSGK--- 65 Query: 65 NLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 G + E + A L + G L R + P EL+ L Sbjct: 66 --GALKTLTKAEP--AAIALPLQQTALFSGFYVNELLCRVIEAETPNGELFQDYLHCLTR 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + E LL +G+G+D T C +G Sbjct: 122 LASEDGVEPALRTFEFQLLTMLGYGVDFTHCAGSGE 157 >gi|53804479|ref|YP_113918.1| DNA repair protein RecO [Methylococcus capsulatus str. Bath] gi|67461356|sp|Q608M9|RECO_METCA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|53758240|gb|AAU92531.1| DNA repair protein RecO [Methylococcus capsulatus str. Bath] Length = 242 Score = 84.8 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 5/154 (3%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 D A +L R Y E +++LE+ T ++GR + + R +LQ + V+W R Sbjct: 17 DHAYLLHRRDYRETSLLLELFTLRHGRIGVIAKGARRGRQGFAAVLQPFVPLLVSWSGRG 76 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L +L ++LF G L R LP +PC EL+ L Sbjct: 77 E--LANLNHAEAAGIGVRLQHTALFC-GFYLNELLMRLLPPHDPCPELFGTYRGGLETLA 133 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL+ IG+GL L +G Sbjct: 134 AGEDLETALRSFELSLLEAIGYGLQLRVEAESGE 167 >gi|294501285|ref|YP_003564985.1| DNA repair protein RecO [Bacillus megaterium QM B1551] gi|294351222|gb|ADE71551.1| DNA repair protein RecO [Bacillus megaterium QM B1551] Length = 254 Score = 84.8 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 71/192 (36%), Gaps = 7/192 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 + I++ YGE N I+ + +R+ G+ R + S R+ + Q ++ Sbjct: 6 EGIVIRTNDYGESNKIVTIYSRELGKVGLMARGAKKPSSRLASVTQLFTYGYFFIQA--G 63 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +G + EV+ S + Y + + +P L+++L+ ++ Sbjct: 64 SGMGTLHQGEVISSMRSIREDIFTTAYASYILELTDKATENNKPNPFLFELLHQTIHYMN 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL--PYA 180 + E+ +L +G L +C V + S + GG +C PY Sbjct: 124 EEYDAEILTFIYEMKMLNVLGLHPTLNECAVCHQGEGTFHFSIREGGFICHRCLEKDPYH 183 Query: 181 EKMLVLPSFLWK 192 K+ + L + Sbjct: 184 LKISPMTVKLLR 195 >gi|172045973|sp|A4WDD6|RECO_ENT38 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 235 Score = 84.8 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + + + EL LL ++G+G+D C +G + D Sbjct: 111 FDYLHCIQALAGATDSPEPALRRFELALLGHLGYGVDFLHCAGSGDSVD 159 >gi|146312693|ref|YP_001177767.1| DNA repair protein RecO [Enterobacter sp. 638] gi|145319569|gb|ABP61716.1| DNA replication and repair protein RecO [Enterobacter sp. 638] Length = 236 Score = 84.8 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + V Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 61 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELF 111 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + + + EL LL ++G+G+D C +G + D Sbjct: 112 FDYLHCIQALAGATDSPEPALRRFELALLGHLGYGVDFLHCAGSGDSVD 160 >gi|206576021|ref|YP_002237092.1| DNA repair protein RecO [Klebsiella pneumoniae 342] gi|288934054|ref|YP_003438113.1| DNA repair protein RecO [Klebsiella variicola At-22] gi|290508250|ref|ZP_06547621.1| DNA repair protein RecO [Klebsiella sp. 1_1_55] gi|238058670|sp|B5XNH2|RECO_KLEP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|206565079|gb|ACI06855.1| DNA repair protein RecO [Klebsiella pneumoniae 342] gi|288888783|gb|ADC57101.1| DNA repair protein RecO [Klebsiella variicola At-22] gi|289777644|gb|EFD85641.1| DNA repair protein RecO [Klebsiella sp. 1_1_55] Length = 245 Score = 84.8 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L+V T + GR + +S R ++ LQ + V + Sbjct: 4 WQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRFGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDML 114 R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 63 R---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + S + + EL LL ++G+G+D C +G Sbjct: 114 LHCIQALAGTSGSPEPALRRFELALLGHLGYGVDFLHCAGSGE 156 >gi|319896660|ref|YP_004134853.1| DNA repair protein rec0 [Haemophilus influenzae F3031] gi|317432162|emb|CBY80513.1| DNA repair protein Rec0 [Haemophilus influenzae F3031] Length = 236 Score = 84.8 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 7/153 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + A Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKSA- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E L + LY G L R + P L+ L Sbjct: 67 ---LKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + E LL+ +G+G+D C +G Sbjct: 124 ETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|296104240|ref|YP_003614386.1| DNA repair protein RecO [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058699|gb|ADF63437.1| DNA repair protein RecO [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 235 Score = 84.8 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 22/174 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 + + + + EL LL ++G+G+D C +G V + + Sbjct: 111 FDYLHCIQALAGATGSPEPALRRFELALLGHLGYGVDFLHCAGSGDEVEDGMTY 164 >gi|221310451|ref|ZP_03592298.1| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. 168] gi|221314774|ref|ZP_03596579.1| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319697|ref|ZP_03600991.1| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. JH642] gi|221323974|ref|ZP_03605268.1| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. SMY] gi|255767577|ref|NP_390406.2| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. 168] gi|321312010|ref|YP_004204297.1| DNA repair protein RecO [Bacillus subtilis BSn5] gi|239938859|sp|P42095|RECO_BACSU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|225185205|emb|CAB14457.2| DNA double strand break repair and homologous recombination factor [Bacillus subtilis subsp. subtilis str. 168] gi|320018284|gb|ADV93270.1| DNA repair protein RecO [Bacillus subtilis BSn5] Length = 255 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 74/198 (37%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + E++ S L Y + R E++P L++ + Sbjct: 59 LMQKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYVAELVDRGTEEKKPNPYLFEFILES 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + I +++ +L +G +L CV S + G +C Sbjct: 119 LKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDGTFHFSVRDNGFICHRCFE 178 Query: 178 --PYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYRIPIKPQTARLLRL 196 >gi|145640278|ref|ZP_01795862.1| DNA repair protein RecO [Haemophilus influenzae R3021] gi|145274864|gb|EDK14726.1| DNA repair protein RecO [Haemophilus influenzae 22.4-21] Length = 236 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARTKRSSWKSVLQPFTPLLLRWTGKS-- 65 Query: 65 NLGEFRFEVLESHCAKLLSSSL---FLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L ++ L LY G L R + P L+ L Sbjct: 66 -----TLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTG 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + E LL+ +G+G+D C +G Sbjct: 121 LATETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|304403963|ref|ZP_07385625.1| DNA repair protein RecO [Paenibacillus curdlanolyticus YK9] gi|304346941|gb|EFM12773.1| DNA repair protein RecO [Paenibacillus curdlanolyticus YK9] Length = 250 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 71/190 (37%), Gaps = 9/190 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M ++ +AII+ YGE N I+ ++T + +R + R + + Q + Sbjct: 1 MLYRTNAIIIRSMDYGEGNKIVTLLTEGGSKAGVIIRGAKKARSRHGSLAQPFTYGEFVF 60 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLN 115 LG E++ES+ LL L Y + R L + E LY L Sbjct: 61 FRGGGGGLGTLNHGEIMESN--HLLRERLELAAYASYAAELADRTLQDDEADPFLYAQLK 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + E+ +L+ G+ L C+ + VS GG +CR Sbjct: 119 ACFEAMQQDKDPQIVSHLFEMKVLQRAGYDPQLNACISCESEEGPFAVSAGGGGVLCRRC 178 Query: 176 --GLPYAEKM 183 PYA ++ Sbjct: 179 MHRDPYAIRL 188 >gi|237746714|ref|ZP_04577194.1| RecO DNA repair protein [Oxalobacter formigenes HOxBLS] gi|229378065|gb|EEO28156.1| RecO DNA repair protein [Oxalobacter formigenes HOxBLS] Length = 277 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 20/174 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++++EV TR YGR + + + R++ +LQ + + W + Sbjct: 49 PGFVLHSYVYRESSLVVEVFTRDYGRVALVAKGAKRPTSRLRGVLQTFQPLSIGWSGKS- 107 Query: 64 QNLGEFRFEVLESHCAKL------LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 E+ A+ L +S LYG L + L +P L++ Sbjct: 108 --------ELRTLTSAEWVGGMIPLENSALLYGFYLNELLLKLLAREDPHQGLFEHYVRA 159 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV--TGVTQDLLW-VSPKSG 168 L + EL LLK G D + + + V D ++ V P+SG Sbjct: 160 LARLATAESAQTVLRIFELALLKETGVASDFSVNIQDRSPVEPDGIYVVDPESG 213 >gi|329123646|ref|ZP_08252206.1| recombination protein O [Haemophilus aegyptius ATCC 11116] gi|327469845|gb|EGF15310.1| recombination protein O [Haemophilus aegyptius ATCC 11116] Length = 236 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 7/153 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + A Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKSA- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E L + LY G L R + P L+ L Sbjct: 67 ---LKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + E LL+ +G+G+D C +G Sbjct: 124 ETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|1303827|dbj|BAA12483.1| YqfI [Bacillus subtilis] Length = 255 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 74/198 (37%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + E++ S L Y + R E++P L++ + Sbjct: 59 LMQKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYVAELVDRGTEEKKPNPYLFEFILES 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + I +++ +L +G +L CV S + G +C Sbjct: 119 LKQMNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDGTFHFSVRDNGFICHRCFE 178 Query: 178 --PYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYRIPIKPQTARLLRL 196 >gi|295706632|ref|YP_003599707.1| DNA repair protein RecO [Bacillus megaterium DSM 319] gi|294804291|gb|ADF41357.1| DNA repair protein RecO [Bacillus megaterium DSM 319] Length = 254 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 70/192 (36%), Gaps = 7/192 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 + I++ YGE N I+ + +R+ G+ R + S R+ + Q ++ Sbjct: 6 EGIVIRTNDYGESNKIVTIYSRELGKVGLMARGAKKPSSRLASVTQLFTYGYFFIQA--G 63 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +G + EV+ S + Y + + +P L+++L ++ Sbjct: 64 SGMGTLHQGEVISSMRSIREDIFTTAYASYILELTDKATENNKPNPFLFELLYQTIHYMN 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL--PYA 180 + E+ +L +G L +C V + S + GG +C PY Sbjct: 124 EEYDAEILTFIYEMKMLNVLGLHPTLNECAVCHRGEGTFHFSIREGGFICHRCLEKDPYH 183 Query: 181 EKMLVLPSFLWK 192 K+ + L + Sbjct: 184 LKISPMTVKLLR 195 >gi|262404772|ref|ZP_06081327.1| DNA recombination and repair protein RecO [Vibrio sp. RC586] gi|262349804|gb|EEY98942.1| DNA recombination and repair protein RecO [Vibrio sp. RC586] Length = 241 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL++ + +YGR + + R ++ LQ + + W Sbjct: 9 FVLHRRPYSESSLILDIFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGN---- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ + R L L+ L Sbjct: 65 -GSMK----TLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALT 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + + EL LL +G+G+D C TG VSP Sbjct: 120 ELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEP-----VSP 160 >gi|167041436|gb|ABZ06188.1| putative Recombination protein O [uncultured marine microorganism HF4000_006O13] gi|167041993|gb|ABZ06730.1| putative Recombination protein O [uncultured marine microorganism HF4000_141E02] Length = 245 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 63/164 (38%), Gaps = 6/164 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 + + ++ Y E + I+ + ++ YGR + + + + LQ ++++W + Sbjct: 9 HEPSYLMHQMPYSETSQIVRIFSQNYGRVDLIAKGSKRPKSKFRSFLQPFLPLQLSWSGK 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L R + + L + FL +P L+ + L+ Sbjct: 69 --SQLKTLREAEIHGQYLTRIQGKHLLSAYYLNELILSFLRMEDPYQNLFALYASALHGF 126 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLWV 163 + I I Q E+++L IG+ ++ ++ + DL +V Sbjct: 127 SESNPIEPILRQFEILMLSEIGYAINFETEALSQKPIEADLDYV 170 >gi|323941172|gb|EGB37357.1| recombination protein O [Escherichia coli E482] Length = 242 Score = 84.0 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +D L+ + + + EL LL ++G+GL+ T C +G Sbjct: 111 FDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGLNFTHCAGSGE 156 >gi|145628684|ref|ZP_01784484.1| DNA repair protein RecO [Haemophilus influenzae 22.1-21] gi|145638757|ref|ZP_01794366.1| DNA repair protein RecO [Haemophilus influenzae PittII] gi|144979154|gb|EDJ88840.1| DNA repair protein RecO [Haemophilus influenzae 22.1-21] gi|145272352|gb|EDK12260.1| DNA repair protein RecO [Haemophilus influenzae PittII] gi|309750247|gb|ADO80231.1| DNA repair protein RecO [Haemophilus influenzae R2866] Length = 236 Score = 84.0 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARTKRSPWKSVLQPFTPLLLRWTGKS-- 65 Query: 65 NLGEFRFEVLESHCAKLLSSSL---FLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L ++ L LY G L R + P L+ L Sbjct: 66 -----TLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIEPETPNPALFQYYLKCLTG 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + I E LL+ +G+G+D C +G Sbjct: 121 LATETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|68248937|ref|YP_248049.1| DNA repair protein RecO [Haemophilus influenzae 86-028NP] gi|81336652|sp|Q4QNK8|RECO_HAEI8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|68057136|gb|AAX87389.1| DNA repair protein RecO [Haemophilus influenzae 86-028NP] Length = 236 Score = 84.0 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKS-- 65 Query: 65 NLGEFRFEVLESHCAKLLSSSL---FLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L ++ L LY G L R + P L+ L Sbjct: 66 -----TLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTG 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + E LL+ +G+G+D C +G Sbjct: 121 LATETNVEPTLRLFEFQLLQMLGYGVDFLHCAGSGE 156 >gi|226311655|ref|YP_002771549.1| DNA repair protein [Brevibacillus brevis NBRC 100599] gi|254790514|sp|C0ZB86|RECO_BREBN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226094603|dbj|BAH43045.1| DNA repair protein [Brevibacillus brevis NBRC 100599] Length = 257 Score = 84.0 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 3/175 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ YGE + ++ + TR+ G+ R + R+ + Q + Sbjct: 1 MLVKWEGIVIRSVDYGESSKVVTMFTRENGKLGVMARGAKKTKSRLAAVSQLFSHSYYLC 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++ + + + ++L+S S + Y L R EREP L+ +L Sbjct: 61 KAGPGTGMPDLSQGDMLDSFRDMRQSLTATAYAAYIAELLDRLTQEREPNPYLFQLLLHT 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + E +L G LT C G ++ +S GG +C Sbjct: 121 FRHLDEGRDAEILCRIFETKMLIVAGISPQLTACANCGEQREPYAISVGQGGLLC 175 >gi|229846418|ref|ZP_04466526.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1] gi|229810511|gb|EEP46229.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1] gi|309972510|gb|ADO95711.1| DNA repair protein RecO [Haemophilus influenzae R2846] Length = 236 Score = 84.0 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKS-- 65 Query: 65 NLGEFRFEVLESHCAKLLSSSL---FLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L ++ L LY G L R + P L+ L Sbjct: 66 -----TLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTG 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + E LL+ +G+G+D C +G Sbjct: 121 LATETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|145634671|ref|ZP_01790380.1| DNA repair protein RecO [Haemophilus influenzae PittAA] gi|229844576|ref|ZP_04464716.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1] gi|145268216|gb|EDK08211.1| DNA repair protein RecO [Haemophilus influenzae PittAA] gi|229812825|gb|EEP48514.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1] Length = 236 Score = 84.0 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 13/155 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKS-- 65 Query: 65 NLGEFRFEVLESHCAKLLSSSL---FLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L ++ L LY G L R + P L+ L Sbjct: 66 -----TLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTG 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I E LL+ +G+G+D C +G Sbjct: 121 LATETNIEPTLRLFEFQLLQILGYGVDFLHCAGSG 155 >gi|291484973|dbj|BAI86048.1| DNA repair protein RecO [Bacillus subtilis subsp. natto BEST195] Length = 255 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 74/198 (37%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + E++ S L Y + R E++P L++ + Sbjct: 59 LMQKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILES 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + I +++ +L +G +L CV S + G +C Sbjct: 119 LKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDGTFHFSVRDNGFICHRCFE 178 Query: 178 --PYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYRIPLKPQTARLLRL 196 >gi|261253898|ref|ZP_05946471.1| DNA recombination and repair protein RecO [Vibrio orientalis CIP 102891] gi|260937289|gb|EEX93278.1| DNA recombination and repair protein RecO [Vibrio orientalis CIP 102891] Length = 255 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R ++ LQ + + W Sbjct: 24 FVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGN---- 79 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ ++ R L L+ L Sbjct: 80 -GSMK----TLRQAEPISLGLPLTGINLYSGMYVNELIGRVLMAEVAMPALFHDYLHALT 134 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C +G Sbjct: 135 ELAQADNPEPALRRFELALLSAMGYGVDFLHCAGSGE 171 >gi|148827479|ref|YP_001292232.1| DNA repair protein RecO [Haemophilus influenzae PittGG] gi|166221894|sp|A5UGE3|RECO_HAEIG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148718721|gb|ABQ99848.1| DNA repair protein RecO [Haemophilus influenzae PittGG] Length = 236 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 7/153 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGK-ST 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E L + LY G L R + P L+ L Sbjct: 67 LKTLAKAEPA---AITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + I E LL+ +G+G+D C +G Sbjct: 124 ETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|222054844|ref|YP_002537206.1| DNA repair protein RecO [Geobacter sp. FRC-32] gi|221564133|gb|ACM20105.1| DNA repair protein RecO [Geobacter sp. FRC-32] Length = 244 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 78/231 (33%), Gaps = 30/231 (12%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQN 65 ++LGV Y + + I+ + T + G+ G RN + R + L+ +R+ L + Sbjct: 9 VVLGVLDYADADKIVTLFTLENGKVKGLARNAKKSRKRFGGALEPFARLRLQLT--LKEG 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCHKIP 124 L + + + + + L L E E L+ +L +L + Sbjct: 67 LSTLNGADVINVFPHIRADLSKIANAAYACELVEQLVGEGEQNPRLFRLLTAYLEHLNLT 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL-----WVSPKSGGAVCRSVGLPY 179 E LLK +G+ +L +C QDL SP G +C S G Sbjct: 127 DHAPSDRRFFEANLLKVLGYQPELARCASC--DQDLANMPQLRFSPSFAGILCSSCG--- 181 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQ--LTDYFLNKYALQHNIIHCHLL 228 + + + ++L + T F + + + Sbjct: 182 ------------RTGRPVSPETLSLLIRSLTTGRFGLVH-FSPDGLAEAGA 219 >gi|260775206|ref|ZP_05884104.1| DNA recombination and repair protein RecO [Vibrio coralliilyticus ATCC BAA-450] gi|260608907|gb|EEX35069.1| DNA recombination and repair protein RecO [Vibrio coralliilyticus ATCC BAA-450] Length = 242 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 17/157 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + ++GR + +S R ++ LQ + + W + Sbjct: 10 FVLHRRPYSESSLILDVFSEEFGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGK---- 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLN 119 G + A+ +S L L G+ ++ R L L+ L Sbjct: 66 -GSMK----TLRQAEPISLGLPLTGINLYSAMYVNELIGRVLMAEVSMPALFHDYLHALT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C TG Sbjct: 121 ELAQCENPEPALRRFELALLSAMGYGVDFLHCAGTGE 157 >gi|16272284|ref|NP_438496.1| DNA repair protein RecO [Haemophilus influenzae Rd KW20] gi|145631422|ref|ZP_01787192.1| DNA repair protein RecO [Haemophilus influenzae R3021] gi|260581202|ref|ZP_05849021.1| DNA repair protein RecO [Haemophilus influenzae RdAW] gi|260582574|ref|ZP_05850364.1| DNA repair protein RecO [Haemophilus influenzae NT127] gi|1172897|sp|P44642|RECO_HAEIN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|1573301|gb|AAC21994.1| DNA repair protein (recO) [Haemophilus influenzae Rd KW20] gi|144982959|gb|EDJ90468.1| DNA repair protein RecO [Haemophilus influenzae R3021] gi|260092127|gb|EEW76071.1| DNA repair protein RecO [Haemophilus influenzae RdAW] gi|260094385|gb|EEW78283.1| DNA repair protein RecO [Haemophilus influenzae NT127] gi|301169037|emb|CBW28634.1| gap repair protein [Haemophilus influenzae 10810] Length = 236 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKS-- 65 Query: 65 NLGEFRFEVLESHCAKLLSSSL---FLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L ++ L LY G L R + P L+ L Sbjct: 66 -----TLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTG 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + I E LL+ +G+G+D C +G Sbjct: 121 LATETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|319775804|ref|YP_004138292.1| DNA repair protein Rec0 [Haemophilus influenzae F3047] gi|317450395|emb|CBY86611.1| DNA repair protein Rec0 [Haemophilus influenzae F3047] Length = 236 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 7/153 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + A Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKNA- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E L + LY G L R + P L+ L Sbjct: 67 ---LKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + E LL+ +G+G+D C +G Sbjct: 124 KTNVEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|295097902|emb|CBK86992.1| DNA replication and repair protein RecO [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 235 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L+V T + GR + +S R ++ LQ + V + Sbjct: 4 WQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSRRSNLKGALQPFTPLLVRFGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDML 114 R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 63 R---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + + + EL LL ++G+G+D C +G Sbjct: 114 LHCIQALAGATGTPEPVLRRFELALLGHLGYGVDFLHCAGSG 155 >gi|260869252|ref|YP_003235654.1| gap repair protein RecO [Escherichia coli O111:H- str. 11128] gi|257765608|dbj|BAI37103.1| gap repair protein RecO [Escherichia coli O111:H- str. 11128] gi|323177305|gb|EFZ62893.1| DNA repair protein RecO [Escherichia coli 1180] Length = 242 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|149374707|ref|ZP_01892481.1| DNA repair protein RecO [Marinobacter algicola DG893] gi|149361410|gb|EDM49860.1| DNA repair protein RecO [Marinobacter algicola DG893] Length = 238 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 8/147 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M Q+ A +L R + E +++++V + GR R G S + ++ LQ + ++W Sbjct: 1 MQ-QEPAYVLHRRPWRETSLMVDVFSLNAGRVTVVARGGNSAKSPLKAQLQPFQPLLLDW 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + L +L LY GL L R LP +P +L+ Sbjct: 60 TGRSD----LKTLTQADVRSGPSLKRTLSLYSGLYVNELLQRLLPMADPHHQLFAAYIDV 115 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGF 144 + + I + E L +G+ Sbjct: 116 IAELSEARDVEPILRRFEQSLAAELGY 142 >gi|24113907|ref|NP_708417.1| DNA repair protein RecO [Shigella flexneri 2a str. 301] gi|30063967|ref|NP_838138.1| DNA repair protein RecO [Shigella flexneri 2a str. 2457T] gi|42559468|sp|Q83QI6|RECO_SHIFL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|24053008|gb|AAN44124.1| RecO protein [Shigella flexneri 2a str. 301] gi|30042223|gb|AAP17948.1| RecO protein [Shigella flexneri 2a str. 2457T] gi|281601978|gb|ADA74962.1| DNA repair protein recO [Shigella flexneri 2002017] gi|313648243|gb|EFS12687.1| DNA repair protein RecO [Shigella flexneri 2a str. 2457T] gi|332753974|gb|EGJ84348.1| DNA repair protein RecO [Shigella flexneri 4343-70] gi|332755801|gb|EGJ86159.1| DNA repair protein RecO [Shigella flexneri 2747-71] gi|332761958|gb|EGJ92231.1| DNA repair protein RecO [Shigella flexneri K-671] gi|332766566|gb|EGJ96771.1| DNA repair protein RecO [Shigella flexneri 2930-71] gi|333000822|gb|EGK20394.1| DNA repair protein RecO [Shigella flexneri K-218] gi|333016797|gb|EGK36123.1| DNA repair protein RecO [Shigella flexneri K-304] Length = 242 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +D L+ + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGDTGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|145636400|ref|ZP_01792069.1| DNA repair protein RecO [Haemophilus influenzae PittHH] gi|145270565|gb|EDK10499.1| DNA repair protein RecO [Haemophilus influenzae PittHH] Length = 236 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKS-- 65 Query: 65 NLGEFRFEVLESHCAKLLSSSL---FLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L ++ L LY G L R + P L+ L Sbjct: 66 -----TLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTG 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + I E LL+ +G+G+D C +G Sbjct: 121 LATETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|213613051|ref|ZP_03370877.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 242 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQLFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 YSGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 111 FDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 159 >gi|149183347|ref|ZP_01861785.1| DNA repair protein RecO [Bacillus sp. SG-1] gi|148848944|gb|EDL63156.1| DNA repair protein RecO [Bacillus sp. SG-1] Length = 250 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 13/193 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ +YGE N I+ + +R+ G+ R + R+ + Q + Sbjct: 1 MLQKCEGIVIRTNNYGESNKIVTIYSRENGKLGVMARGAKKTNSRLSSVSQLFTYGYFLY 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + + S Y + + + ER+P L++ML Sbjct: 61 QK--SSGLGTLQQADTIASMRNIREDLFKTAYATYVVDLIDKGTEERKPNPFLFEMLFQT 118 Query: 118 L---NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L N P ++ I E+ +L +G L KC V G T+ S K G +C Sbjct: 119 LTYINEEYDPDIVTHI---FEMKMLPVLGLHPSLDKCAVCGETEGEFSFSFKENGIICHR 175 Query: 175 VGL--PYAEKMLV 185 PY K+ Sbjct: 176 CIGNDPYHYKVSP 188 >gi|333001658|gb|EGK21225.1| DNA repair protein RecO [Shigella flexneri K-272] gi|333015934|gb|EGK35269.1| DNA repair protein RecO [Shigella flexneri K-227] Length = 242 Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|261340866|ref|ZP_05968724.1| DNA repair protein RecO [Enterobacter cancerogenus ATCC 35316] gi|288317297|gb|EFC56235.1| DNA repair protein RecO [Enterobacter cancerogenus ATCC 35316] Length = 236 Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 20/167 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + V Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 61 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELF 111 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + + + EL LL ++G+G+D C +G Sbjct: 112 FDYLHCIQALAGATGTPEPALRRFELALLGHLGYGVDFLHCAGSGEE 158 >gi|300935698|ref|ZP_07150668.1| DNA repair protein RecO [Escherichia coli MS 21-1] gi|300459132|gb|EFK22625.1| DNA repair protein RecO [Escherichia coli MS 21-1] Length = 242 Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|332344440|gb|AEE57774.1| DNA repair protein RecO [Escherichia coli UMNK88] Length = 242 Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIESLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|331654027|ref|ZP_08355028.1| DNA repair protein RecO [Escherichia coli M718] gi|331048876|gb|EGI20952.1| DNA repair protein RecO [Escherichia coli M718] Length = 242 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGGTGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|296333315|ref|ZP_06875768.1| DNA repair protein RecO [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675180|ref|YP_003866852.1| DNA double strand break repair and homologous recombination factor [Bacillus subtilis subsp. spizizenii str. W23] gi|296149513|gb|EFG90409.1| DNA repair protein RecO [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413424|gb|ADM38543.1| DNA double strand break repair and homologous recombination factor [Bacillus subtilis subsp. spizizenii str. W23] Length = 255 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + E++ S L Y + + E++P L++ + Sbjct: 59 LMQKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYIAELVDKGTEEKKPNPYLFEFILES 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + I ++ +L +G +L CV S + G +C Sbjct: 119 FKQLDEGTDPDVITFIAQMKMLGVMGLYPELNHCVHCKSQDGTFHFSVRDNGFICHRCFE 178 Query: 178 --PYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYRVPIKPQTARLLRL 196 >gi|330860317|emb|CBX70631.1| DNA repair protein recO [Yersinia enterocolitica W22703] Length = 231 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLELY 111 R EV A+ +S +L L GL L R L + L+ Sbjct: 60 CTGR---------GEVKTLRSAEPVSLALPLAGSMLYSGLYVNELLSRVLEHQTNYSALF 110 Query: 112 DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 L + ++ EL +L ++G+G+D C +G Sbjct: 111 FDYLHCLQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQ 156 >gi|323978405|gb|EGB73490.1| recombination protein O [Escherichia coli TW10509] Length = 243 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 61 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 111 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 112 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 157 >gi|74313127|ref|YP_311546.1| DNA repair protein RecO [Shigella sonnei Ss046] gi|157158543|ref|YP_001463888.1| DNA repair protein RecO [Escherichia coli E24377A] gi|157162044|ref|YP_001459362.1| DNA repair protein RecO [Escherichia coli HS] gi|170681019|ref|YP_001744754.1| DNA repair protein RecO [Escherichia coli SMS-3-5] gi|191167983|ref|ZP_03029785.1| DNA repair protein RecO [Escherichia coli B7A] gi|193064044|ref|ZP_03045129.1| DNA repair protein RecO [Escherichia coli E22] gi|193068426|ref|ZP_03049389.1| DNA repair protein RecO [Escherichia coli E110019] gi|194429295|ref|ZP_03061822.1| DNA repair protein RecO [Escherichia coli B171] gi|194432090|ref|ZP_03064379.1| DNA repair protein RecO [Shigella dysenteriae 1012] gi|209920044|ref|YP_002294128.1| DNA repair protein RecO [Escherichia coli SE11] gi|218547907|ref|YP_002381698.1| DNA repair protein RecO [Escherichia fergusonii ATCC 35469] gi|218555146|ref|YP_002388059.1| DNA repair protein RecO [Escherichia coli IAI1] gi|218696193|ref|YP_002403860.1| DNA repair protein RecO [Escherichia coli 55989] gi|218701079|ref|YP_002408708.1| DNA repair protein RecO [Escherichia coli IAI39] gi|218706069|ref|YP_002413588.1| DNA repair protein RecO [Escherichia coli UMN026] gi|260845250|ref|YP_003223028.1| gap repair protein RecO [Escherichia coli O103:H2 str. 12009] gi|260856659|ref|YP_003230550.1| gap repair protein RecO [Escherichia coli O26:H11 str. 11368] gi|293406007|ref|ZP_06649999.1| DNA repair protein recO [Escherichia coli FVEC1412] gi|293410981|ref|ZP_06654557.1| DNA repair protein RecO [Escherichia coli B354] gi|293446919|ref|ZP_06663341.1| DNA repair protein RecO [Escherichia coli B088] gi|298381807|ref|ZP_06991406.1| DNA repair protein recO [Escherichia coli FVEC1302] gi|300817658|ref|ZP_07097873.1| DNA repair protein RecO [Escherichia coli MS 107-1] gi|300820756|ref|ZP_07100906.1| DNA repair protein RecO [Escherichia coli MS 119-7] gi|300898320|ref|ZP_07116668.1| DNA repair protein RecO [Escherichia coli MS 198-1] gi|300920733|ref|ZP_07137139.1| DNA repair protein RecO [Escherichia coli MS 115-1] gi|300927058|ref|ZP_07142810.1| DNA repair protein RecO [Escherichia coli MS 182-1] gi|301024852|ref|ZP_07188489.1| DNA repair protein RecO [Escherichia coli MS 69-1] gi|301330333|ref|ZP_07222980.1| DNA repair protein RecO [Escherichia coli MS 78-1] gi|307313864|ref|ZP_07593480.1| DNA repair protein RecO [Escherichia coli W] gi|309794381|ref|ZP_07688804.1| DNA repair protein RecO [Escherichia coli MS 145-7] gi|312965481|ref|ZP_07779713.1| DNA repair protein RecO [Escherichia coli 2362-75] gi|331669315|ref|ZP_08370163.1| DNA repair protein RecO [Escherichia coli TA271] gi|331678561|ref|ZP_08379236.1| DNA repair protein RecO [Escherichia coli H591] gi|331684215|ref|ZP_08384811.1| DNA repair protein RecO [Escherichia coli H299] gi|92087034|sp|Q3YYV1|RECO_SHISS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166918729|sp|A7ZQ09|RECO_ECO24 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166918730|sp|A8A375|RECO_ECOHS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737863|sp|B7NRL8|RECO_ECO7I RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737864|sp|B7M8H8|RECO_ECO8A RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737865|sp|B7N6F3|RECO_ECOLU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737866|sp|B1LP78|RECO_ECOSM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737867|sp|B7LUZ9|RECO_ESCF3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058645|sp|B6I5D9|RECO_ECOSE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|73856604|gb|AAZ89311.1| protein interacts with RecR and possibly RecF proteins [Shigella sonnei Ss046] gi|157067724|gb|ABV06979.1| DNA repair protein RecO [Escherichia coli HS] gi|157080573|gb|ABV20281.1| DNA repair protein RecO [Escherichia coli E24377A] gi|170518737|gb|ACB16915.1| DNA repair protein RecO [Escherichia coli SMS-3-5] gi|190901990|gb|EDV61737.1| DNA repair protein RecO [Escherichia coli B7A] gi|192929279|gb|EDV82888.1| DNA repair protein RecO [Escherichia coli E22] gi|192958378|gb|EDV88818.1| DNA repair protein RecO [Escherichia coli E110019] gi|194412703|gb|EDX28998.1| DNA repair protein RecO [Escherichia coli B171] gi|194419619|gb|EDX35699.1| DNA repair protein RecO [Shigella dysenteriae 1012] gi|209913303|dbj|BAG78377.1| DNA repair protein RecO [Escherichia coli SE11] gi|218352925|emb|CAU98724.1| gap repair protein [Escherichia coli 55989] gi|218355448|emb|CAQ88057.1| gap repair protein [Escherichia fergusonii ATCC 35469] gi|218361914|emb|CAQ99514.1| gap repair protein [Escherichia coli IAI1] gi|218371065|emb|CAR18892.1| gap repair protein [Escherichia coli IAI39] gi|218433166|emb|CAR14062.1| gap repair protein [Escherichia coli UMN026] gi|257755308|dbj|BAI26810.1| gap repair protein RecO [Escherichia coli O26:H11 str. 11368] gi|257760397|dbj|BAI31894.1| gap repair protein RecO [Escherichia coli O103:H2 str. 12009] gi|284922515|emb|CBG35602.1| DNA repair protein [Escherichia coli 042] gi|291323749|gb|EFE63177.1| DNA repair protein RecO [Escherichia coli B088] gi|291428215|gb|EFF01242.1| DNA repair protein recO [Escherichia coli FVEC1412] gi|291471449|gb|EFF13933.1| DNA repair protein RecO [Escherichia coli B354] gi|298279249|gb|EFI20763.1| DNA repair protein recO [Escherichia coli FVEC1302] gi|300357982|gb|EFJ73852.1| DNA repair protein RecO [Escherichia coli MS 198-1] gi|300396383|gb|EFJ79921.1| DNA repair protein RecO [Escherichia coli MS 69-1] gi|300412304|gb|EFJ95614.1| DNA repair protein RecO [Escherichia coli MS 115-1] gi|300416942|gb|EFK00253.1| DNA repair protein RecO [Escherichia coli MS 182-1] gi|300526509|gb|EFK47578.1| DNA repair protein RecO [Escherichia coli MS 119-7] gi|300529646|gb|EFK50708.1| DNA repair protein RecO [Escherichia coli MS 107-1] gi|300843667|gb|EFK71427.1| DNA repair protein RecO [Escherichia coli MS 78-1] gi|306906365|gb|EFN36880.1| DNA repair protein RecO [Escherichia coli W] gi|308121837|gb|EFO59099.1| DNA repair protein RecO [Escherichia coli MS 145-7] gi|309702951|emb|CBJ02282.1| DNA repair protein [Escherichia coli ETEC H10407] gi|312289901|gb|EFR17789.1| DNA repair protein RecO [Escherichia coli 2362-75] gi|315061884|gb|ADT76211.1| gap repair protein [Escherichia coli W] gi|320182110|gb|EFW57014.1| DNA recombination and repair protein RecO [Shigella boydii ATCC 9905] gi|320196401|gb|EFW71025.1| DNA recombination and repair protein RecO [Escherichia coli WV_060327] gi|320200129|gb|EFW74718.1| DNA recombination and repair protein RecO [Escherichia coli EC4100B] gi|323156223|gb|EFZ42382.1| DNA repair protein RecO [Escherichia coli EPECa14] gi|323159222|gb|EFZ45212.1| DNA repair protein RecO [Escherichia coli E128010] gi|323167801|gb|EFZ53496.1| DNA repair protein RecO [Shigella sonnei 53G] gi|323173117|gb|EFZ58748.1| DNA repair protein RecO [Escherichia coli LT-68] gi|323184555|gb|EFZ69929.1| DNA repair protein RecO [Escherichia coli 1357] gi|323377535|gb|ADX49803.1| DNA repair protein RecO [Escherichia coli KO11] gi|323936305|gb|EGB32596.1| recombination protein O [Escherichia coli E1520] gi|323944622|gb|EGB40690.1| recombination protein O [Escherichia coli H120] gi|323968013|gb|EGB63425.1| recombination protein O [Escherichia coli M863] gi|324020023|gb|EGB89242.1| DNA repair protein RecO [Escherichia coli MS 117-3] gi|324118225|gb|EGC12121.1| recombination protein O [Escherichia coli E1167] gi|327252275|gb|EGE63947.1| DNA repair protein RecO [Escherichia coli STEC_7v] gi|331064509|gb|EGI36420.1| DNA repair protein RecO [Escherichia coli TA271] gi|331075021|gb|EGI46341.1| DNA repair protein RecO [Escherichia coli H591] gi|331079167|gb|EGI50369.1| DNA repair protein RecO [Escherichia coli H299] gi|332088077|gb|EGI93202.1| DNA repair protein RecO [Shigella boydii 5216-82] gi|332089248|gb|EGI94355.1| DNA repair protein RecO [Shigella dysenteriae 155-74] gi|333000425|gb|EGK20007.1| DNA repair protein RecO [Shigella flexneri VA-6] Length = 242 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|324113092|gb|EGC07068.1| recombination protein O [Escherichia fergusonii B253] Length = 242 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|331674014|ref|ZP_08374777.1| DNA repair protein RecO [Escherichia coli TA280] gi|331069287|gb|EGI40679.1| DNA repair protein RecO [Escherichia coli TA280] Length = 242 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +D L+ + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|325496355|gb|EGC94214.1| DNA repair protein RecO [Escherichia fergusonii ECD227] Length = 242 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSILKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|110806510|ref|YP_690030.1| DNA repair protein RecO [Shigella flexneri 5 str. 8401] gi|123342607|sp|Q0T1U0|RECO_SHIF8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110616058|gb|ABF04725.1| protein interacts with RecR and possibly RecF proteins [Shigella flexneri 5 str. 8401] Length = 242 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|332162689|ref|YP_004299266.1| DNA repair protein RecO [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606794|emb|CBY28292.1| DNA recombination and repair protein RecO [Yersinia enterocolitica subsp. palearctica Y11] gi|325666919|gb|ADZ43563.1| DNA repair protein RecO [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 241 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLELY 111 R EV A+ +S +L L GL L R L + L+ Sbjct: 60 CTGR---------GEVKTLRSAEPVSLALPLAGSMLYSGLYVNELLSRVLEHQTNYSALF 110 Query: 112 DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 L + ++ EL +L ++G+G+D C +G Sbjct: 111 FDYLHCLQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQ 156 >gi|254490789|ref|ZP_05103972.1| DNA repair protein RecO [Methylophaga thiooxidans DMS010] gi|224463961|gb|EEF80227.1| DNA repair protein RecO [Methylophaga thiooxydans DMS010] Length = 234 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 10/167 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNW 58 M A +L R + E +++++ +TR +GR R + + + +LQ + ++W Sbjct: 1 MELTS-AFVLHHRPFRETSLLVDALTRDHGRVSLVARGMRQQKKRQSHVLQLFQPLWISW 59 Query: 59 RSRLAQN-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG+ S A L L GL L R LP +E +YD Sbjct: 60 YGYSELHTLGQAEA----SESAFRLIGKASLCGLYLNELLVRLLPIQESEPVIYDAYYQA 115 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV--VTGVTQDLLW 162 L + + E LL +G+GL L +T + + L+ Sbjct: 116 LQSLQQNENEQVVLRLFEKRLLAELGYGLVLRHEAGSLTPIEDNGLY 162 >gi|256017286|ref|ZP_05431151.1| DNA repair protein RecO [Shigella sp. D9] gi|332278277|ref|ZP_08390690.1| DNA repair protein recO [Shigella sp. D9] gi|332100629|gb|EGJ03975.1| DNA repair protein recO [Shigella sp. D9] Length = 242 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A IL R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFILHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|15803091|ref|NP_289122.1| DNA repair protein RecO [Escherichia coli O157:H7 EDL933] gi|15832685|ref|NP_311458.1| DNA repair protein RecO [Escherichia coli O157:H7 str. Sakai] gi|16130490|ref|NP_417060.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655] gi|26248930|ref|NP_754970.1| DNA repair protein RecO [Escherichia coli CFT073] gi|82777991|ref|YP_404340.1| DNA repair protein RecO [Shigella dysenteriae Sd197] gi|89109371|ref|AP_003151.1| gap repair protein [Escherichia coli str. K-12 substr. W3110] gi|91211891|ref|YP_541877.1| DNA repair protein RecO [Escherichia coli UTI89] gi|110642727|ref|YP_670457.1| DNA repair protein RecO [Escherichia coli 536] gi|117624786|ref|YP_853699.1| DNA repair protein RecO [Escherichia coli APEC O1] gi|168748365|ref|ZP_02773387.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4113] gi|168757774|ref|ZP_02782781.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4401] gi|168761186|ref|ZP_02786193.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4501] gi|168768669|ref|ZP_02793676.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4486] gi|168773509|ref|ZP_02798516.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4196] gi|168778542|ref|ZP_02803549.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4076] gi|168787925|ref|ZP_02812932.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC869] gi|168798947|ref|ZP_02823954.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC508] gi|170019152|ref|YP_001724106.1| DNA repair protein RecO [Escherichia coli ATCC 8739] gi|170082174|ref|YP_001731494.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B] gi|188492218|ref|ZP_02999488.1| DNA repair protein RecO [Escherichia coli 53638] gi|191174023|ref|ZP_03035540.1| DNA repair protein RecO [Escherichia coli F11] gi|194437625|ref|ZP_03069721.1| DNA repair protein RecO [Escherichia coli 101-1] gi|195936712|ref|ZP_03082094.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4024] gi|208808195|ref|ZP_03250532.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4206] gi|208813327|ref|ZP_03254656.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4045] gi|208821700|ref|ZP_03262020.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4042] gi|209396972|ref|YP_002272040.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4115] gi|217327334|ref|ZP_03443417.1| DNA repair protein RecO [Escherichia coli O157:H7 str. TW14588] gi|218559486|ref|YP_002392399.1| DNA repair protein RecO [Escherichia coli S88] gi|218690681|ref|YP_002398893.1| DNA repair protein RecO [Escherichia coli ED1a] gi|227887601|ref|ZP_04005406.1| recombination protein O [Escherichia coli 83972] gi|237705075|ref|ZP_04535556.1| gap repair protein RecO [Escherichia sp. 3_2_53FAA] gi|238901730|ref|YP_002927526.1| gap repair protein [Escherichia coli BW2952] gi|253772536|ref|YP_003035367.1| DNA repair protein RecO [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162540|ref|YP_003045648.1| DNA repair protein RecO [Escherichia coli B str. REL606] gi|254794515|ref|YP_003079352.1| DNA repair protein RecO [Escherichia coli O157:H7 str. TW14359] gi|256021749|ref|ZP_05435614.1| DNA repair protein RecO [Escherichia sp. 4_1_40B] gi|261222999|ref|ZP_05937280.1| gap repair protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259450|ref|ZP_05951983.1| gap repair protein [Escherichia coli O157:H7 str. FRIK966] gi|291283840|ref|YP_003500658.1| DNA repair protein recO [Escherichia coli O55:H7 str. CB9615] gi|293415834|ref|ZP_06658477.1| DNA repair protein RecO [Escherichia coli B185] gi|300904251|ref|ZP_07122110.1| DNA repair protein RecO [Escherichia coli MS 84-1] gi|300927691|ref|ZP_07143259.1| DNA repair protein RecO [Escherichia coli MS 187-1] gi|300951717|ref|ZP_07165536.1| DNA repair protein RecO [Escherichia coli MS 116-1] gi|300958794|ref|ZP_07170906.1| DNA repair protein RecO [Escherichia coli MS 175-1] gi|300974163|ref|ZP_07172481.1| DNA repair protein RecO [Escherichia coli MS 200-1] gi|300982269|ref|ZP_07175980.1| DNA repair protein RecO [Escherichia coli MS 45-1] gi|301022061|ref|ZP_07185988.1| DNA repair protein RecO [Escherichia coli MS 196-1] gi|301047204|ref|ZP_07194296.1| DNA repair protein RecO [Escherichia coli MS 185-1] gi|301302932|ref|ZP_07209060.1| DNA repair protein RecO [Escherichia coli MS 124-1] gi|301648329|ref|ZP_07248069.1| DNA repair protein RecO [Escherichia coli MS 146-1] gi|306814371|ref|ZP_07448533.1| DNA repair protein RecO [Escherichia coli NC101] gi|307139201|ref|ZP_07498557.1| DNA repair protein RecO [Escherichia coli H736] gi|309784620|ref|ZP_07679255.1| DNA repair protein RecO [Shigella dysenteriae 1617] gi|312973189|ref|ZP_07787361.1| DNA repair protein RecO [Escherichia coli 1827-70] gi|331643189|ref|ZP_08344324.1| DNA repair protein RecO [Escherichia coli H736] gi|331648311|ref|ZP_08349400.1| DNA repair protein RecO [Escherichia coli M605] gi|331658709|ref|ZP_08359653.1| DNA repair protein RecO [Escherichia coli TA206] gi|331664133|ref|ZP_08365043.1| DNA repair protein RecO [Escherichia coli TA143] gi|67471982|sp|P0A7H3|RECO_ECOLI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67471983|sp|P0A7H4|RECO_ECOL6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67471984|sp|P0A7H5|RECO_ECO57 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|90103525|sp|Q32CV6|RECO_SHIDS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361457|sp|Q0TES3|RECO_ECOL5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361458|sp|Q1R8G8|RECO_ECOUT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221890|sp|A1AE95|RECO_ECOK1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189039656|sp|B1IVR2|RECO_ECOLC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737862|sp|B7MIQ0|RECO_ECO45 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229485533|sp|B1XB39|RECO_ECODH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058644|sp|B5Z139|RECO_ECO5E RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|332138214|pdb|3Q8D|A Chain A, E. Coli Reco Complex With Ssb C-Temrinus gi|332138215|pdb|3Q8D|B Chain B, E. Coli Reco Complex With Ssb C-Temrinus gi|12516982|gb|AAG57680.1|AE005487_4 protein interacts with RecR and possibly RecF proteins [Escherichia coli O157:H7 str. EDL933] gi|26109336|gb|AAN81538.1|AE016764_220 DNA repair protein recO [Escherichia coli CFT073] gi|147552|gb|AAA24515.1| recombination protein [Escherichia coli] gi|499369|gb|AAA21842.1| recO [Escherichia coli] gi|987640|dbj|BAA10912.1| recO protein [Escherichia coli K-12] gi|2367140|gb|AAC75618.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655] gi|13362902|dbj|BAB36854.1| RecO protein [Escherichia coli O157:H7 str. Sakai] gi|81242139|gb|ABB62849.1| RecO [Shigella dysenteriae Sd197] gi|85675456|dbj|BAE76741.1| gap repair protein [Escherichia coli str. K12 substr. W3110] gi|91073465|gb|ABE08346.1| protein interacts with RecR and possibly RecF proteins [Escherichia coli UTI89] gi|110344319|gb|ABG70556.1| DNA repair protein RecO [Escherichia coli 536] gi|115513910|gb|ABJ01985.1| gap repair protein RecO [Escherichia coli APEC O1] gi|169754080|gb|ACA76779.1| DNA repair protein RecO [Escherichia coli ATCC 8739] gi|169890009|gb|ACB03716.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B] gi|187770738|gb|EDU34582.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4196] gi|188017100|gb|EDU55222.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4113] gi|188487417|gb|EDU62520.1| DNA repair protein RecO [Escherichia coli 53638] gi|189003617|gb|EDU72603.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4076] gi|189355304|gb|EDU73723.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4401] gi|189362323|gb|EDU80742.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4486] gi|189368475|gb|EDU86891.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4501] gi|189372382|gb|EDU90798.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC869] gi|189378575|gb|EDU96991.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC508] gi|190905714|gb|EDV65336.1| DNA repair protein RecO [Escherichia coli F11] gi|194423431|gb|EDX39422.1| DNA repair protein RecO [Escherichia coli 101-1] gi|208727996|gb|EDZ77597.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4206] gi|208734604|gb|EDZ83291.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4045] gi|208741823|gb|EDZ89505.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4042] gi|209158372|gb|ACI35805.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4115] gi|209762898|gb|ACI79761.1| RecO protein [Escherichia coli] gi|209762900|gb|ACI79762.1| RecO protein [Escherichia coli] gi|209762902|gb|ACI79763.1| RecO protein [Escherichia coli] gi|209762904|gb|ACI79764.1| RecO protein [Escherichia coli] gi|209762906|gb|ACI79765.1| RecO protein [Escherichia coli] gi|217319701|gb|EEC28126.1| DNA repair protein RecO [Escherichia coli O157:H7 str. TW14588] gi|218366255|emb|CAR04002.1| gap repair protein [Escherichia coli S88] gi|218428245|emb|CAR09162.2| gap repair protein [Escherichia coli ED1a] gi|222034270|emb|CAP77011.1| DNA repair protein recO [Escherichia coli LF82] gi|226901441|gb|EEH87700.1| gap repair protein RecO [Escherichia sp. 3_2_53FAA] gi|227835951|gb|EEJ46417.1| recombination protein O [Escherichia coli 83972] gi|238861284|gb|ACR63282.1| gap repair protein [Escherichia coli BW2952] gi|242378166|emb|CAQ32940.1| protein interacts with RecR and possibly RecF proteins, subunit of RecFOR complex [Escherichia coli BL21(DE3)] gi|253323580|gb|ACT28182.1| DNA repair protein RecO [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974441|gb|ACT40112.1| DNA repair protein RecO [Escherichia coli B str. REL606] gi|253978608|gb|ACT44278.1| DNA repair protein RecO [Escherichia coli BL21(DE3)] gi|254593915|gb|ACT73276.1| gap repair protein [Escherichia coli O157:H7 str. TW14359] gi|260448355|gb|ACX38777.1| DNA repair protein RecO [Escherichia coli DH1] gi|281179614|dbj|BAI55944.1| DNA repair protein RecO [Escherichia coli SE15] gi|290763713|gb|ADD57674.1| DNA repair protein recO [Escherichia coli O55:H7 str. CB9615] gi|291433482|gb|EFF06461.1| DNA repair protein RecO [Escherichia coli B185] gi|294489626|gb|ADE88382.1| DNA repair protein RecO [Escherichia coli IHE3034] gi|299881366|gb|EFI89577.1| DNA repair protein RecO [Escherichia coli MS 196-1] gi|300300881|gb|EFJ57266.1| DNA repair protein RecO [Escherichia coli MS 185-1] gi|300308902|gb|EFJ63422.1| DNA repair protein RecO [Escherichia coli MS 200-1] gi|300314542|gb|EFJ64326.1| DNA repair protein RecO [Escherichia coli MS 175-1] gi|300403784|gb|EFJ87322.1| DNA repair protein RecO [Escherichia coli MS 84-1] gi|300408823|gb|EFJ92361.1| DNA repair protein RecO [Escherichia coli MS 45-1] gi|300449001|gb|EFK12621.1| DNA repair protein RecO [Escherichia coli MS 116-1] gi|300464244|gb|EFK27737.1| DNA repair protein RecO [Escherichia coli MS 187-1] gi|300841867|gb|EFK69627.1| DNA repair protein RecO [Escherichia coli MS 124-1] gi|301073605|gb|EFK88411.1| DNA repair protein RecO [Escherichia coli MS 146-1] gi|305851765|gb|EFM52217.1| DNA repair protein RecO [Escherichia coli NC101] gi|307554584|gb|ADN47359.1| DNA repair protein RecO [Escherichia coli ABU 83972] gi|307625887|gb|ADN70191.1| DNA repair protein RecO [Escherichia coli UM146] gi|308927517|gb|EFP72989.1| DNA repair protein RecO [Shigella dysenteriae 1617] gi|310331784|gb|EFP99019.1| DNA repair protein RecO [Escherichia coli 1827-70] gi|315137189|dbj|BAJ44348.1| DNA repair protein recO [Escherichia coli DH1] gi|315256593|gb|EFU36561.1| DNA repair protein RecO [Escherichia coli MS 85-1] gi|315288042|gb|EFU47444.1| DNA repair protein RecO [Escherichia coli MS 110-3] gi|315292459|gb|EFU51811.1| DNA repair protein RecO [Escherichia coli MS 153-1] gi|315300508|gb|EFU59737.1| DNA repair protein RecO [Escherichia coli MS 16-3] gi|320188906|gb|EFW63565.1| DNA recombination and repair protein RecO [Escherichia coli O157:H7 str. EC1212] gi|320640814|gb|EFX10308.1| DNA repair protein RecO [Escherichia coli O157:H7 str. G5101] gi|320646160|gb|EFX15100.1| DNA repair protein RecO [Escherichia coli O157:H- str. 493-89] gi|320651455|gb|EFX19851.1| DNA repair protein RecO [Escherichia coli O157:H- str. H 2687] gi|320657056|gb|EFX24875.1| DNA repair protein RecO [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662721|gb|EFX30060.1| DNA repair protein RecO [Escherichia coli O55:H7 str. USDA 5905] gi|320667541|gb|EFX34461.1| DNA repair protein RecO [Escherichia coli O157:H7 str. LSU-61] gi|323188320|gb|EFZ73612.1| DNA repair protein RecO [Escherichia coli RN587/1] gi|323949219|gb|EGB45110.1| recombination protein O [Escherichia coli H252] gi|323955801|gb|EGB51559.1| recombination protein O [Escherichia coli H263] gi|323961180|gb|EGB56793.1| recombination protein O [Escherichia coli H489] gi|323971109|gb|EGB66356.1| recombination protein O [Escherichia coli TA007] gi|324008474|gb|EGB77693.1| DNA repair protein RecO [Escherichia coli MS 57-2] gi|324014390|gb|EGB83609.1| DNA repair protein RecO [Escherichia coli MS 60-1] gi|326340371|gb|EGD64175.1| DNA recombination and repair protein RecO [Escherichia coli O157:H7 str. 1125] gi|326345054|gb|EGD68798.1| DNA recombination and repair protein RecO [Escherichia coli O157:H7 str. 1044] gi|330912334|gb|EGH40844.1| DNA recombination and repair protein RecO [Escherichia coli AA86] gi|331039987|gb|EGI12207.1| DNA repair protein RecO [Escherichia coli H736] gi|331042860|gb|EGI15001.1| DNA repair protein RecO [Escherichia coli M605] gi|331054374|gb|EGI26401.1| DNA repair protein RecO [Escherichia coli TA206] gi|331059932|gb|EGI31909.1| DNA repair protein RecO [Escherichia coli TA143] Length = 242 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +D L+ + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|315615827|gb|EFU96459.1| DNA repair protein RecO [Escherichia coli 3431] Length = 242 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +D L+ + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|148825386|ref|YP_001290139.1| DNA repair protein RecO [Haemophilus influenzae PittEE] gi|166221893|sp|A5UAF5|RECO_HAEIE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148715546|gb|ABQ97756.1| DNA repair protein RecO [Haemophilus influenzae PittEE] Length = 236 Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKS-- 65 Query: 65 NLGEFRFEVLESHCAKLLSSSL---FLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L ++ L LY G L R + P L+ L Sbjct: 66 -----TLKTLTKAEPAAITLPLQQITLYSGFYVNELLTRVIESETPNPALFQHYLKCLTG 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + E LL+ +G+G+D C +G Sbjct: 121 LATETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 >gi|82545017|ref|YP_408964.1| DNA repair protein RecO [Shigella boydii Sb227] gi|187733291|ref|YP_001881344.1| DNA repair protein RecO [Shigella boydii CDC 3083-94] gi|90103524|sp|Q31XS2|RECO_SHIBS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691722|sp|B2TXX8|RECO_SHIB3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|81246428|gb|ABB67136.1| RecO [Shigella boydii Sb227] gi|187430283|gb|ACD09557.1| DNA repair protein RecO [Shigella boydii CDC 3083-94] gi|320186364|gb|EFW61098.1| DNA recombination and repair protein RecO [Shigella flexneri CDC 796-83] gi|332092621|gb|EGI97693.1| DNA repair protein RecO [Shigella boydii 3594-74] Length = 242 Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGE 156 >gi|119713603|gb|ABL97654.1| DNA repair protein RecO [uncultured marine bacterium EB0_39H12] Length = 241 Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 75/174 (43%), Gaps = 15/174 (8%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L R Y E ++I+E T+ +GR + + ++ +L + + V+ + Sbjct: 10 EPAFVLHTRPYQETSLIVEFFTQSFGRINAVAKGAKRPKSPLRSVLTPVSRLSVSLSGKS 69 Query: 63 A-QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNC 120 +NL E+L+ + LS L + I L + + +P ++ FL Sbjct: 70 ELKNLSSA--EILDHYP---LSDGASLNSIIYINELITKATEKEDPHKIIFLKYQNFLEN 124 Query: 121 HKIPSVIGKIFVQ---IELMLLKNIGFGLDLTKCVVTG--VTQDLLW-VSPKSG 168 + + + + E+ LL+ +G+G+DLT+ T + +D + P G Sbjct: 125 ISKNNNLDNLELLLRDFEMTLLQEMGYGIDLTRDAETNNKLKEDTNYRFDPNIG 178 >gi|311895950|dbj|BAJ28358.1| putative DNA repair protein RecO [Kitasatospora setae KM-6054] Length = 248 Score = 82.1 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 24/242 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ +TRQ+G+ R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITFLTRQHGQVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R + +G + E + + A+++ +++ E E + Y + Sbjct: 64 RGSDLVGRTLPLCTQVETIAPYGARIVDDYTRYTAGTAMLETAERFAENEGQPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + + LL+++ G+G T C G+ + S ++GG Sbjct: 124 LVGALRTLAAGTHQAHLVL--DAFLLRSLAVNGYGASFTDCARCGLPGPNRFFSLQAGGV 181 Query: 171 VCRSV-----GLPYAEKMLVLPSFLWKEEQTID---ADSLKSAFQLTDYFLNKYALQHNI 222 +C +P E +++L + L + QT D + L +L + Sbjct: 182 LCGDCRVPGSAVPSPETLVLLGALLSGDWQTADGCEPRYWREGSGLVAAYLQWHL--ERG 239 Query: 223 IH 224 I Sbjct: 240 IR 241 >gi|215487909|ref|YP_002330340.1| DNA repair protein RecO [Escherichia coli O127:H6 str. E2348/69] gi|215265981|emb|CAS10390.1| gap repair protein [Escherichia coli O127:H6 str. E2348/69] Length = 242 Score = 82.1 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R EV A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T CV +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCVGSGE 156 >gi|94968222|ref|YP_590270.1| DNA repair protein RecO [Candidatus Koribacter versatilis Ellin345] gi|119361444|sp|Q1ISF4|RECO_ACIBL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|94550272|gb|ABF40196.1| DNA replication and repair protein RecO [Candidatus Koribacter versatilis Ellin345] Length = 244 Score = 82.1 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 5/177 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M Q +AI+L E ++++ + TR G+ G + + R + L+ VRV + Sbjct: 1 MLKQSEAIVLRTYPMREADLLVTLFTRAEGKIKGVAKAAKKSRRRFGGALEPLTHVRVYY 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R Q L +VL S + + L + LP+REP ++ + Sbjct: 61 EDRERQELTRLDSCDVLASPMSAEVDYPRALALGHVAEVIDDLLPDREPNDAVFRLSLAV 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCR 173 L +P + +L +++ GF DL CVV G D + P G VC Sbjct: 121 LGQL-VPGAVWMPLTYFDLWMVRLAGFLPDLMHCVVCGEELDDRAFFHPLVDGLVCA 176 >gi|307823641|ref|ZP_07653870.1| DNA repair protein RecO [Methylobacter tundripaludum SV96] gi|307735626|gb|EFO06474.1| DNA repair protein RecO [Methylobacter tundripaludum SV96] Length = 249 Score = 82.1 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 9/148 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A IL R Y E ++I++V+TR +GR + + + +LQ + V++ + Sbjct: 20 PAFILRHRKYRETSLIIDVLTRDFGRISLLAKGVRKAKSKTAGMLQPFIPLLVSYFGKAE 79 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNCH 121 L E+++ L LY I L FL + +P E++ L+C Sbjct: 80 --LKTLTDVEMIQPFSEI---KGLALYCGFYINELVGYFLHKYDPHPEVFGHYGECLSCL 134 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + Q EL L++ G+GL L Sbjct: 135 SDGPNVEAALRQFELNLMECAGYGLQLE 162 >gi|311278502|ref|YP_003940733.1| DNA repair protein RecO [Enterobacter cloacae SCF1] gi|308747697|gb|ADO47449.1| DNA repair protein RecO [Enterobacter cloacae SCF1] Length = 242 Score = 82.1 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 20/169 (11%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + ++ R ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARAKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R V A+ +S +L L G+ L+ R L EL+ Sbjct: 60 FGGRGD---------VKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + + + EL LL ++G+G+D C +G D Sbjct: 111 FDYLHCIQALAGATRSPEPALRRFELALLGHLGYGVDFLHCAGSGEEVD 159 >gi|229916326|ref|YP_002884972.1| DNA repair protein RecO [Exiguobacterium sp. AT1b] gi|259563678|sp|C4L405|RECO_EXISA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229467755|gb|ACQ69527.1| DNA repair protein RecO [Exiguobacterium sp. AT1b] Length = 249 Score = 82.1 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 5/181 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAG-NLVRVN 57 M + I++ +YGE N ++ + T + G+ R + R Q V + Sbjct: 1 MLQKVTGIVVRTVNYGESNKVVTLFTEELGKVAIMARGAKKPGSRFHASSQPFVEGVYIF 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 SR L +V+ S+ Y + + + R + +R L+ +L Sbjct: 61 PSSRGLAQLKS--SDVMTSYPEIRKDVERMAYAMYWLELVDRSVEDRVQNRPLFRILQDA 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L I +EL +L +G LT CV G D ++ S SGG +C Sbjct: 119 LQALNAGMDADVITHYVELRILHLLGVAPVLTGCVRCGDVTDPMYFSVASGGFLCARHPE 178 Query: 178 P 178 Sbjct: 179 E 179 >gi|283786181|ref|YP_003366046.1| DNA repair protein [Citrobacter rodentium ICC168] gi|282949635|emb|CBG89254.1| DNA repair protein [Citrobacter rodentium ICC168] Length = 236 Score = 81.7 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R + E +++L+V T + GR + +S R ++ LQ + V + Sbjct: 4 WQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRFGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI------VPLFRFLPEREPCLELYDML 114 R EV A+ +S +L L G+ L R L L+ Sbjct: 63 R---------GEVKTLRNAEAVSLALPLSGITLYSGLYVNELLARVLEHETRFSALFFDY 113 Query: 115 NIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + S + + + EL LL ++G+G+D C +G Sbjct: 114 LHCIQALAGVSGTPEPVLRRFELALLGHLGYGVDFLHCAGSGE 156 >gi|1033154|gb|AAA79827.1| CG Site No. 17962 [Escherichia coli str. K-12 substr. MG1655] Length = 242 Score = 81.7 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVXKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +D L+ + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|229543821|ref|ZP_04432880.1| DNA repair protein RecO [Bacillus coagulans 36D1] gi|229324960|gb|EEN90636.1| DNA repair protein RecO [Bacillus coagulans 36D1] Length = 255 Score = 81.7 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 14/190 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVRVNWRS 60 + I++ YGE N IL + T+++G+ R + R+ + Q GN + R Sbjct: 6 EGIVIKNTDYGESNKILHIYTKEFGKLGFMARGAKKPNSRLAAVSQVFTYGNFLFQPSRG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 GE + + ++ Y + L R + +++ L+++L L Sbjct: 66 LATLQQGE-TVSPMRHIREDIFKTAYAAY---VVELLGRAVEDKKKNPSLFELLLRTLEY 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS--VGLP 178 I E+ +L +G + KC V G T+ S + G +C P Sbjct: 122 IDEGYDPEIIRDIFEMKMLNVLGMYPVMDKCAVCGNTEGPFAFSIRENGLLCPRCFARDP 181 Query: 179 YAEKMLVLPS 188 Y L L Sbjct: 182 YR---LPLSQ 188 >gi|89094544|ref|ZP_01167482.1| DNA repair protein RecO [Oceanospirillum sp. MED92] gi|89081143|gb|EAR60377.1| DNA repair protein RecO [Oceanospirillum sp. MED92] Length = 229 Score = 81.7 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 14/167 (8%) Query: 1 MYWQDD--AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRV 56 M D +L R Y + +++++ T ++G+ V+ + + +++ +Q V++ Sbjct: 1 MAVTDQQAGYVLHGRPYRDTSLLVDFFTLEHGKVSAVVQGARRPNSKLRASVQPFVPVQL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLN 115 +WR R E A L L GL L R L +P +LY Sbjct: 61 SWRGRND----LKTVTQAEPAAAMLFLKGDALLCGLYLNELLERLLLPFDPHPKLYVYYQ 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW 162 LN + E LL +G +L TG Q+ ++ Sbjct: 117 YALNELVAGDDVEGALRTFEHRLLDELGHLPEL-----TGKDQNRIY 158 >gi|302518924|ref|ZP_07271266.1| DNA repair protein RecO [Streptomyces sp. SPB78] gi|318059906|ref|ZP_07978629.1| DNA repair protein RecO [Streptomyces sp. SA3_actG] gi|318076741|ref|ZP_07984073.1| DNA repair protein RecO [Streptomyces sp. SA3_actF] gi|333027247|ref|ZP_08455311.1| putative DNA repair protein RecO [Streptomyces sp. Tu6071] gi|302427819|gb|EFK99634.1| DNA repair protein RecO [Streptomyces sp. SPB78] gi|332747099|gb|EGJ77540.1| putative DNA repair protein RecO [Streptomyces sp. Tu6071] Length = 249 Score = 81.7 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGQGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDM 113 R ++ +G + E + + +++ S + G + RF E EP ++ Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGRHIVTDYSRYTAGTAMLETAERFTANEGEPAIQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L S + ++ LL+++ G+ C G+ + S SGGA Sbjct: 124 LVGGLRTLAEGSHAPALV--MDAFLLRSLAVNGYAPSFDACARCGLPGPNRFFSVSSGGA 181 Query: 171 VCRSVGLP 178 VC +P Sbjct: 182 VCGDCRVP 189 >gi|319943507|ref|ZP_08017789.1| recombination protein O [Lautropia mirabilis ATCC 51599] gi|319743322|gb|EFV95727.1| recombination protein O [Lautropia mirabilis ATCC 51599] Length = 234 Score = 81.7 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 17/154 (11%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + +L +Y E ++I+++ R+ GR + + + ++P+L + R Sbjct: 8 EPGFVLHSHAYRETSLIVDLFLRERGRVSAVAKGARRPTSALRPVLLQFQPIEFRLSGRN 67 Query: 63 AQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 E+ A+ L+ + R L +P +L+D Sbjct: 68 ---------ELRTLTRAEWQGGMAVPAGRALLFAFYLNELVMRLLAREDPHPQLFDAYAD 118 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L +I + E +LL IG+ DL Sbjct: 119 ALYQLGEQGADERILRRFEWLLLTEIGYAPDLAC 152 >gi|312947136|gb|ADR27963.1| DNA repair protein RecO [Escherichia coli O83:H1 str. NRG 857C] Length = 242 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S L L G+ L+ R L EL Sbjct: 60 FGGR---------GEVKTLRSAEAVSLVLPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +D L+ + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|119476419|ref|ZP_01616770.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2143] gi|119450283|gb|EAW31518.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2143] Length = 239 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 11/161 (6%) Query: 1 MYWQD-DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS-----HRMQPILQAGNLV 54 M + A IL R++ + ++I++ ++ YGR G V+ ++ + + + Q + Sbjct: 1 MRIESQPAYILHTRNFRDSSLIVDFLSADYGRVSGVVKGVRATSKSAKQRRGLSQPFVPL 60 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDM 113 ++W + +E A L L+ GL L R L + + +Y + Sbjct: 61 LISWSGKSD----LKTIIQMEPRGAPLQLQGKRLFSGLYVNELLSRLLQQDDQHTAIYTL 116 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 C S I + Q EL L++ +G+GLD T+ T Sbjct: 117 YEWIAKCLVGDSEIDIVLRQFELQLMEYLGYGLDFTQEAET 157 >gi|120555158|ref|YP_959509.1| DNA repair protein RecO [Marinobacter aquaeolei VT8] gi|171769204|sp|A1U2V3|RECO_MARAV RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120325007|gb|ABM19322.1| DNA replication and repair protein RecO [Marinobacter aquaeolei VT8] Length = 246 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 10/158 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 Q+ A ++ R + E +++++ T +GR R S + ++ LQ + V+W + Sbjct: 7 QEPAYVVHRRPWRETALLVDLFTLNHGRMSVVARGANSTKSPLKAQLQPFQPLLVDWTGK 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 LE A +S LY G + R LP +P L+ L Sbjct: 67 SE----LKTLVQLEVRSAPAVSQPRALYSGFYINELVQRVLPVADPSPALFASYIETLQA 122 Query: 121 HKI---PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + E ++G+ + TG Sbjct: 123 LADLSSQDDVEPLLRRFERAFAASLGYDFAWDETTDTG 160 >gi|311069128|ref|YP_003974051.1| DNA repair protein RecO [Bacillus atrophaeus 1942] gi|310869645|gb|ADP33120.1| DNA repair protein RecO [Bacillus atrophaeus 1942] Length = 255 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 74/198 (37%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKTNSRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + E++ S L Y + + E++P L++++ Sbjct: 59 LMQKTSGLGTLQQGEMILSMRGIREDLFLTAYAAFIAELVDKGTEEKKPNPYLFELILES 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L I +++ +L IG +L CV S + G +C Sbjct: 119 LKRLNEGIDPDVITFIVQMKMLGVIGLYPELNHCVHCQSQDGTFHFSVRDNGFICHRCFG 178 Query: 178 --PYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYKVPITPQTARLLRL 196 >gi|225182108|ref|ZP_03735536.1| DNA repair protein RecO [Dethiobacter alkaliphilus AHT 1] gi|225167195|gb|EEG76018.1| DNA repair protein RecO [Dethiobacter alkaliphilus AHT 1] Length = 247 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 5/174 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + AI+L R Y E + ++ ++TR G+ R + + + +++ L R Sbjct: 3 EMRSPAIVLRGRDYREADRLVTLLTRDAGKVTVVARGTKKTKSKFSALVEPLTLGHFLLR 62 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L + E+++ + + LF Y R LPE EP + ++ +L L Sbjct: 63 RGKSLDTL--IQGEIIKPYNSLRKDLLLFTYAQYFCEVCERSLPENEPAVPVFTLLLTAL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + ++ EL LL +GF L C G +P GG +C Sbjct: 121 ETLETEADSARVARCFELNLLDELGFRPVLDACCTCGTATGPFLFTPGHGGLLC 174 >gi|320176133|gb|EFW51200.1| DNA recombination and repair protein RecO [Shigella dysenteriae CDC 74-1112] Length = 242 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELY 111 + R EV A+ +S +L L GL L R L EL+ Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSSITLYSGLYINELLSRVLEYETRFSELF 110 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGE 156 >gi|145595959|ref|YP_001160256.1| DNA repair protein RecO [Salinispora tropica CNB-440] gi|145305296|gb|ABP55878.1| DNA repair protein RecO [Salinispora tropica CNB-440] Length = 279 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L V+ GE + I+ ++TR++GR R + + R L+ V + Sbjct: 9 YRDDAVVLRVQKLGESDRIITLLTRRHGRLRAVARGVRRTTSRFGARLEPFGHVDLQLAG 68 Query: 61 RLAQNLGE-----FRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDM 113 + G + E ++ + +LL + R P EREP L L+ + Sbjct: 69 DPKGHQGSSLHTVSQVEGIDLYGKRLLGDYPRYTAASAVCETAERLTPVEREPSLRLFQL 128 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + + + LL+ + G+ L C V G S +GGA Sbjct: 129 TLGALRALASGEHAATLVL--DAYLLRGMALAGWAPALAGCAVCGTPGRHRAFSVPAGGA 186 Query: 171 VCRSV 175 VC Sbjct: 187 VCLDC 191 >gi|314918332|gb|EFS82163.1| DNA repair protein RecO [Propionibacterium acnes HL050PA1] Length = 290 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D A++L GE + I+ +++R++G+ R + S + L NLV + + Sbjct: 48 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQ 107 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 R + E L + A L SLF + +P +REP Y +L Sbjct: 108 GRNLD--VVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGA 165 Query: 118 LNCHKI--------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L P ++ ++ L L G+ DL CV G SP GG Sbjct: 166 LRVLGQGTTDGPRPPEMVLDSYL---LRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGG 222 Query: 170 AVCRSVGLP 178 VC + P Sbjct: 223 VVCINCQPP 231 >gi|327440929|dbj|BAK17294.1| recombinational DNA repair protein [Solibacillus silvestris StLB046] Length = 257 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 68/193 (35%), Gaps = 13/193 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVR 55 M + + I+L R+YGE N I+ +MTR+ G+ R + R+ + Q G+ + Sbjct: 1 MLHKWEGIVLKARAYGESNKIVTLMTREAGKVACMARGAKKPTSRLAGVTQTFMHGSFLV 60 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 +G + E S Y + + R + E P +D+L Sbjct: 61 QR-----TSGMGTLQQGEHFNSMRHIQTDIVATAYASYIVEIVDRLVEEGRPEPYAFDIL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN + I + ++ +L G L C G S GG +C Sbjct: 116 IQALNAIEEGYDPEAITLFVDWKMLPFAGIQPILHACAGCGAVDGEFAFSFTQGGFICHR 175 Query: 175 VGL--PYAEKMLV 185 PY ++ Sbjct: 176 CFHLDPYIIRLSP 188 >gi|317128321|ref|YP_004094603.1| DNA repair protein RecO [Bacillus cellulosilyticus DSM 2522] gi|315473269|gb|ADU29872.1| DNA repair protein RecO [Bacillus cellulosilyticus DSM 2522] Length = 249 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 7/184 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + + +++ YGE N I+ + TR+ G+ R + R Q + Sbjct: 1 MLQKVEGLVIRTNDYGETNKIVTIFTRENGKIALMARGAKRPKSRFASSAQIFVYGIFIY 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 +S + +G + +V++S L +G + + R +RE L+++L Sbjct: 61 QS--STGIGTLSQSDVIDSFRDVRSDLKLTAHGAYIVELIDRLTEDRERNPFLFELLYQT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + E +L G LT+C G + S K G +C Sbjct: 119 FQFLNEGLDPEILTRIFETKMLHVAGVTPVLTQCTSCGSESEFYVFSMKQAGLLCGRC-- 176 Query: 178 PYAE 181 Y + Sbjct: 177 QYED 180 >gi|52424294|ref|YP_087431.1| DNA repair protein RecO [Mannheimia succiniciproducens MBEL55E] gi|81609676|sp|Q65W14|RECO_MANSM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52306346|gb|AAU36846.1| RecO protein [Mannheimia succiniciproducens MBEL55E] Length = 228 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 66/159 (41%), Gaps = 8/159 (5%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNL 66 +L + Y E ++++++ T + GR + ++ R ++ +LQ + + W + + + Sbjct: 1 MLHRKPYSETSLLVDLFTEESGRLTVLAKGARAKRSALKSVLQPFTPLLLRWTGKSSLKI 60 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP-S 125 + E + A L + G + R + P +L+ L + + Sbjct: 61 LT-KAEP--AAIALPLQQTALFSGFYVNELITRVIEPETPNPQLFQDYLHCLTSLAVSQN 117 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 + + E LL +G+G+D C +G V +++ + Sbjct: 118 FVEPALREFEFKLLNILGYGVDFLHCAGSGEPVDENMTY 156 >gi|160871667|ref|ZP_02061799.1| DNA repair protein RecO [Rickettsiella grylli] gi|159120466|gb|EDP45804.1| DNA repair protein RecO [Rickettsiella grylli] Length = 238 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 57/156 (36%), Gaps = 11/156 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRN-----GQSHRMQPILQAGNLVRVNWRSR 61 A IL R Y + +++++ T Q+GR + G+ R + LQA + ++WR + Sbjct: 10 AYILHTRPYRDTSLLIDAFTAQHGRISLIAKGARGIRGKKSRFKGTLQAFVPLLLSWRGK 69 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL-NC 120 L E L+ L G L L +P EL+ L Sbjct: 70 TDL-LSLINAEP-HMFPLPPLTGPLLACGFYLNELLTYLLYRYDPYPELFHAYQTTLYRL 127 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 P ++ E LL +G+ L L K T Sbjct: 128 FDNPMFALRL---FEKKLLAELGYALSLNKESRTHQ 160 >gi|297516304|ref|ZP_06934690.1| DNA repair protein RecO [Escherichia coli OP50] Length = 161 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLEL- 110 + R EV A+ +S +L L G+ L+ R L EL Sbjct: 60 FGGR---------GEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 110 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +D L+ + + + EL LL ++G+G++ T C +G Sbjct: 111 FDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGE 156 >gi|170767492|ref|ZP_02901945.1| DNA repair protein RecO [Escherichia albertii TW07627] gi|170123826|gb|EDS92757.1| DNA repair protein RecO [Escherichia albertii TW07627] Length = 243 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 20/166 (12%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R ++ LQ + + Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY 111 + R E+ A+ +S +L L G+ L+ R L EL+ Sbjct: 61 FGGR---------GEIKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELF 111 Query: 112 DMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + + + EL LL ++G+G++ C +G Sbjct: 112 FDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFMHCAGSGE 157 >gi|314925459|gb|EFS89290.1| DNA repair protein RecO [Propionibacterium acnes HL036PA3] Length = 237 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D A++L GE + I+ +++R++G+ R + S + L NLV + + Sbjct: 4 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQ 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 R + E L + A L SLF + +P +REP Y +L Sbjct: 64 GRNLD--VVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGA 121 Query: 118 LNCHKI--------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L P ++ ++ L L G+ DL CV G SP GG Sbjct: 122 LRVLGQGTTDGPRPPEMVLDSYL---LRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGG 178 Query: 170 AVCRSVGLP 178 VC + P Sbjct: 179 VVCINCQPP 187 >gi|302545505|ref|ZP_07297847.1| DNA repair protein RecO [Streptomyces hygroscopicus ATCC 53653] gi|302463123|gb|EFL26216.1| DNA repair protein RecO [Streptomyces himastatinicus ATCC 53653] Length = 248 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRNHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R + +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 RGGELIGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S +GGA Sbjct: 124 LVGGLRTLASGEHEPHLIL--DAFLLRSLAVNGYAPSFDDCAKCGMPGPNRFFSVGAGGA 181 Query: 171 VCRSVGLP 178 +C +P Sbjct: 182 ICGECRVP 189 >gi|226940391|ref|YP_002795465.1| DNA repair protein RecO [Laribacter hongkongensis HLHK9] gi|254764636|sp|C1D7L6|RECO_LARHH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226715318|gb|ACO74456.1| RecO [Laribacter hongkongensis HLHK9] Length = 242 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 87/239 (36%), Gaps = 15/239 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A +L + Y E ++++E+ TR++GR R + R ++ +L + + V W + Sbjct: 11 QAFVLHAQPYKETSLLVEMFTREHGRVGLVARGARRPRAGIRALLLPFSPLEVGWFGKSD 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + +L + L + G + + + +P L+D + Sbjct: 71 --IRTLSDIDWQGGLPQLAGTPL-VTGFYVNELIMKLVARDDPHEGLFDDYRTLIAHLAR 127 Query: 124 PSVI-GKIFVQIELMLLKNIGFGLDLTK-CVVTGVTQDLLW-VSPKSGGAVCRSVGLPYA 180 SV + + EL LL G+ L + V D ++ P G G + Sbjct: 128 GSVAIAPVLRRFELQLLAATGYAPTLDRDLAGEPVRADAVYGFVPGEGARPGAERGCEVS 187 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 + L+ + A L+ A FLN+ L H + L L ++ L Sbjct: 188 GQTLL--ALDHGALDQASAAVLREAR-----FLNRALLTHALAGTELASRALLNEVAAL 239 >gi|23099405|ref|NP_692871.1| DNA repair protein RecO [Oceanobacillus iheyensis HTE831] gi|42559473|sp|Q8CXD4|RECO_OCEIH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|22777634|dbj|BAC13906.1| DNA repair protein (recombination protein O) [Oceanobacillus iheyensis HTE831] Length = 258 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 7/180 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + D II+ + YGE + ++ + + + G+ + + RM + Q + + Sbjct: 1 MLEKIDGIIIKTKDYGETHKLVTIFSNKIGKFNALAKGAKKPKSRMAAVTQP--FINARF 58 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNI 116 + L + EVL+S + + + L + L +E LY+ Sbjct: 59 FVYIGSGLSTIQQGEVLDS-FRIIREDIFKTAYVSYMAELTDKLLDAKENDPFLYEQFYQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL L K GF L +C G + L S + GG +C+ Sbjct: 118 TLLWINNQDEVDIPVIMYELKLYKKAGFAPVLHQCSRCGNQEGLSKFSIREGGMLCQQCA 177 >gi|300087574|ref|YP_003758096.1| DNA repair protein RecO [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527307|gb|ADJ25775.1| DNA repair protein RecO [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 264 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 17/185 (9%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-- 57 + AI++ E + I+ TR+ GR R + S R+ L+ N + Sbjct: 6 ELKTPAIVIRRARLKEADRIITFFTRELGRVSALARGVRKPSSRLAGHLEPLNHTDLTLA 65 Query: 58 -WRSRLAQNLGEFRFEV---LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 ++ L +G L S + Y L + RF PE E ++D+ Sbjct: 66 MGKA-LPTIIGSQTLNPHLCLRSSLERT------SYALYFAELVARFTPEEEANRRVFDL 118 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAV 171 L L+ + + E+ LL +G+ L C+ G + + + + GG + Sbjct: 119 LAEALDAACDADNLELLARYFEVNLLAALGYQPRLGACLDCGKALKTETNYFANSLGGVL 178 Query: 172 CRSVG 176 C Sbjct: 179 CPQCA 183 >gi|295839012|ref|ZP_06825945.1| DNA repair protein RecO [Streptomyces sp. SPB74] gi|295827284|gb|EFG65328.1| DNA repair protein RecO [Streptomyces sp. SPB74] Length = 249 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 19/225 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGQGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDM 113 R ++ +G + E + + +++ S + G + RF E EP ++ Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGRHIVTDYSRYTAGTAMLETAERFTANEGEPAIQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L S + ++ LL+++ G+ C G+ + S SGGA Sbjct: 124 LVGGLRTLAEGSHAPALV--MDAFLLRSLAVNGYAPSFGDCARCGLPGPNRFFSVSSGGA 181 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTD 210 VC +P +E +++L + L + T DA + A + + Sbjct: 182 VCGDCRVPGSVVPSSETLILLGALLTGDWATADACEARHAREGSG 226 >gi|327330803|gb|EGE72549.1| DNA repair protein RecO [Propionibacterium acnes HL097PA1] Length = 246 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D A++L GE + I+ +++R++G+ R + S + L NLV + + Sbjct: 4 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQ 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 R + E L + A L SLF + +P +REP Y +L Sbjct: 64 GRNLD--VVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGA 121 Query: 118 LNCHKI--------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L P ++ ++ L L G+ DL CV G SP GG Sbjct: 122 LRVLGQGTTDGPRPPEMVLDSYL---LRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGG 178 Query: 170 AVCRSVGLP 178 VC + P Sbjct: 179 VVCINCQPP 187 >gi|212710661|ref|ZP_03318789.1| hypothetical protein PROVALCAL_01727 [Providencia alcalifaciens DSM 30120] gi|212686742|gb|EEB46270.1| hypothetical protein PROVALCAL_01727 [Providencia alcalifaciens DSM 30120] Length = 241 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 9/165 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++++ T G+ + + +R ++ LQ + + W Sbjct: 4 WQ-RAFVLHSRPYSETSLLIDFFTEGEGKIRLLAKGARRNRSPLRGCLQPFTPLLIRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + A LS ++ GL R + P L+ L Sbjct: 63 K-GEIKTLINADPVSL--ALPLSGTVLYSGLYLNELTARVIEFGTPYSSLFFDYLNCLQV 119 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 + ++ EL LL +G+G+D C +G VT + + Sbjct: 120 LAGSERTPESALRQFELALLSYLGYGVDFLHCAGSGEPVTDAMTY 164 >gi|50842428|ref|YP_055655.1| DNA repair protein RecO [Propionibacterium acnes KPA171202] gi|282854112|ref|ZP_06263449.1| DNA repair protein RecO [Propionibacterium acnes J139] gi|289425304|ref|ZP_06427081.1| DNA repair protein RecO [Propionibacterium acnes SK187] gi|289427297|ref|ZP_06429013.1| DNA repair protein RecO [Propionibacterium acnes J165] gi|295130504|ref|YP_003581167.1| DNA repair protein RecO [Propionibacterium acnes SK137] gi|61214916|sp|Q6A969|RECO_PROAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|50840030|gb|AAT82697.1| DNA repair protein RecO [Propionibacterium acnes KPA171202] gi|282583565|gb|EFB88945.1| DNA repair protein RecO [Propionibacterium acnes J139] gi|289154282|gb|EFD02970.1| DNA repair protein RecO [Propionibacterium acnes SK187] gi|289159766|gb|EFD07954.1| DNA repair protein RecO [Propionibacterium acnes J165] gi|291376643|gb|ADE00498.1| DNA repair protein RecO [Propionibacterium acnes SK137] gi|313764549|gb|EFS35913.1| DNA repair protein RecO [Propionibacterium acnes HL013PA1] gi|313772412|gb|EFS38378.1| DNA repair protein RecO [Propionibacterium acnes HL074PA1] gi|313792238|gb|EFS40339.1| DNA repair protein RecO [Propionibacterium acnes HL110PA1] gi|313801813|gb|EFS43047.1| DNA repair protein RecO [Propionibacterium acnes HL110PA2] gi|313807422|gb|EFS45909.1| DNA repair protein RecO [Propionibacterium acnes HL087PA2] gi|313809930|gb|EFS47651.1| DNA repair protein RecO [Propionibacterium acnes HL083PA1] gi|313813032|gb|EFS50746.1| DNA repair protein RecO [Propionibacterium acnes HL025PA1] gi|313816091|gb|EFS53805.1| DNA repair protein RecO [Propionibacterium acnes HL059PA1] gi|313820231|gb|EFS57945.1| DNA repair protein RecO [Propionibacterium acnes HL036PA1] gi|313822960|gb|EFS60674.1| DNA repair protein RecO [Propionibacterium acnes HL036PA2] gi|313825112|gb|EFS62826.1| DNA repair protein RecO [Propionibacterium acnes HL063PA1] gi|313827681|gb|EFS65395.1| DNA repair protein RecO [Propionibacterium acnes HL063PA2] gi|313830261|gb|EFS67975.1| DNA repair protein RecO [Propionibacterium acnes HL007PA1] gi|313834062|gb|EFS71776.1| DNA repair protein RecO [Propionibacterium acnes HL056PA1] gi|313838639|gb|EFS76353.1| DNA repair protein RecO [Propionibacterium acnes HL086PA1] gi|314915545|gb|EFS79376.1| DNA repair protein RecO [Propionibacterium acnes HL005PA4] gi|314919987|gb|EFS83818.1| DNA repair protein RecO [Propionibacterium acnes HL050PA3] gi|314923086|gb|EFS86917.1| DNA repair protein RecO [Propionibacterium acnes HL001PA1] gi|314932000|gb|EFS95831.1| DNA repair protein RecO [Propionibacterium acnes HL067PA1] gi|314955869|gb|EFT00269.1| DNA repair protein RecO [Propionibacterium acnes HL027PA1] gi|314958350|gb|EFT02453.1| DNA repair protein RecO [Propionibacterium acnes HL002PA1] gi|314960095|gb|EFT04197.1| DNA repair protein RecO [Propionibacterium acnes HL002PA2] gi|314962896|gb|EFT06996.1| DNA repair protein RecO [Propionibacterium acnes HL082PA1] gi|314966855|gb|EFT10954.1| DNA repair protein RecO [Propionibacterium acnes HL082PA2] gi|314968026|gb|EFT12125.1| DNA repair protein RecO [Propionibacterium acnes HL037PA1] gi|314973267|gb|EFT17363.1| DNA repair protein RecO [Propionibacterium acnes HL053PA1] gi|314975942|gb|EFT20037.1| DNA repair protein RecO [Propionibacterium acnes HL045PA1] gi|314978301|gb|EFT22395.1| DNA repair protein RecO [Propionibacterium acnes HL072PA2] gi|314981197|gb|EFT25291.1| DNA repair protein RecO [Propionibacterium acnes HL110PA3] gi|314984039|gb|EFT28131.1| DNA repair protein RecO [Propionibacterium acnes HL005PA1] gi|314987802|gb|EFT31893.1| DNA repair protein RecO [Propionibacterium acnes HL005PA2] gi|314990024|gb|EFT34115.1| DNA repair protein RecO [Propionibacterium acnes HL005PA3] gi|315078111|gb|EFT50162.1| DNA repair protein RecO [Propionibacterium acnes HL053PA2] gi|315080741|gb|EFT52717.1| DNA repair protein RecO [Propionibacterium acnes HL078PA1] gi|315084411|gb|EFT56387.1| DNA repair protein RecO [Propionibacterium acnes HL027PA2] gi|315085751|gb|EFT57727.1| DNA repair protein RecO [Propionibacterium acnes HL002PA3] gi|315088831|gb|EFT60807.1| DNA repair protein RecO [Propionibacterium acnes HL072PA1] gi|315091769|gb|EFT63745.1| DNA repair protein RecO [Propionibacterium acnes HL110PA4] gi|315093224|gb|EFT65200.1| DNA repair protein RecO [Propionibacterium acnes HL060PA1] gi|315096180|gb|EFT68156.1| DNA repair protein RecO [Propionibacterium acnes HL038PA1] gi|315098441|gb|EFT70417.1| DNA repair protein RecO [Propionibacterium acnes HL059PA2] gi|315101201|gb|EFT73177.1| DNA repair protein RecO [Propionibacterium acnes HL046PA1] gi|315103272|gb|EFT75248.1| DNA repair protein RecO [Propionibacterium acnes HL050PA2] gi|315105478|gb|EFT77454.1| DNA repair protein RecO [Propionibacterium acnes HL030PA1] gi|315108423|gb|EFT80399.1| DNA repair protein RecO [Propionibacterium acnes HL030PA2] gi|327326096|gb|EGE67886.1| DNA repair protein RecO [Propionibacterium acnes HL096PA2] gi|327327681|gb|EGE69457.1| DNA repair protein RecO [Propionibacterium acnes HL103PA1] gi|327332033|gb|EGE73770.1| DNA repair protein RecO [Propionibacterium acnes HL096PA3] gi|327443236|gb|EGE89890.1| DNA repair protein RecO [Propionibacterium acnes HL013PA2] gi|327446021|gb|EGE92675.1| DNA repair protein RecO [Propionibacterium acnes HL043PA2] gi|327448000|gb|EGE94654.1| DNA repair protein RecO [Propionibacterium acnes HL043PA1] gi|327450876|gb|EGE97530.1| DNA repair protein RecO [Propionibacterium acnes HL087PA3] gi|327453047|gb|EGE99701.1| DNA repair protein RecO [Propionibacterium acnes HL092PA1] gi|327453776|gb|EGF00431.1| DNA repair protein RecO [Propionibacterium acnes HL083PA2] gi|328753563|gb|EGF67179.1| DNA repair protein RecO [Propionibacterium acnes HL020PA1] gi|328754295|gb|EGF67911.1| DNA repair protein RecO [Propionibacterium acnes HL087PA1] gi|328754452|gb|EGF68068.1| DNA repair protein RecO [Propionibacterium acnes HL025PA2] gi|328760402|gb|EGF73970.1| DNA repair protein RecO [Propionibacterium acnes HL099PA1] gi|332675340|gb|AEE72156.1| DNA repair protein RecO [Propionibacterium acnes 266] Length = 246 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D A++L GE + I+ +++R++G+ R + S + L NLV + + Sbjct: 4 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQ 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 R + E L + A L SLF + +P +REP Y +L Sbjct: 64 GRNLD--VVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGA 121 Query: 118 LNCHKI--------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L P ++ ++ L L G+ DL CV G SP GG Sbjct: 122 LRVLGQGTTDGPRPPEMVLDSYL---LRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGG 178 Query: 170 AVCRSVGLP 178 VC + P Sbjct: 179 VVCINCQPP 187 >gi|161511220|ref|NP_826805.2| DNA repair protein RecO [Streptomyces avermitilis MA-4680] gi|119370512|sp|Q82BS6|RECO_STRAW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 248 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGGAIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ + C G+ + S +GG+ Sbjct: 124 LVGGLRTLARGEHEPHLVL--DAFLLRSLAVNGYAPSFSNCAKCGMPGPNRFFSVAAGGS 181 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 VC +P A+ +++L + L + +T DA ++ L +L+ + Sbjct: 182 VCVDCRVPGSVVPSAQALVLLGALLTGDWETADACEPRYVREGSGLVSAYLHWHL 236 >gi|192360449|ref|YP_001983039.1| DNA repair protein RecO [Cellvibrio japonicus Ueda107] gi|238692465|sp|B3PL65|RECO_CELJU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190686614|gb|ACE84292.1| DNA repair protein RecO [Cellvibrio japonicus Ueda107] Length = 236 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A IL R Y + +++L+++T YGR R + + + +L + + VNW+ + Sbjct: 7 PAYILHARPYRDTSLLLDLLTPVYGRITAVARGVRQSKGHKRQLLNPFHRLLVNWQGKSE 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L +E+ L LY G L R LPE++ L++ L+ Sbjct: 67 LKL----ITGVETDHHYLQLQGNALYSGFYLNELLVRLLPEQDVITGLFERYEWTLDALH 122 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 + + + E MLL+ +G+ LD Sbjct: 123 RGEPLEPLLREFEFMLLQGLGYALDF 148 >gi|301154943|emb|CBW14406.1| gap repair protein [Haemophilus parainfluenzae T3T1] Length = 234 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 9/153 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 6 GFVLHRRPYSETSLLVDLFTEETGRLTVIAKGARAKRSAWKSVLQPFTPLLLRWSGK--- 62 Query: 65 NLGEFRFEVLESHCAKLL-SSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 G + A L LY G + R + +L+ L Sbjct: 63 --GALKTLTKAEPAAITLPLQQTALYSGFYVNELITRVIEPETANPQLFQHYLQCLTGLA 120 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + E LLK +G+G+D C +G Sbjct: 121 TQPQVEPTLRLFEFHLLKILGYGIDFLHCAGSG 153 >gi|29609289|dbj|BAC73340.1| putative DNA recombination and repair protein [Streptomyces avermitilis MA-4680] Length = 251 Score = 79.4 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 7 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 66 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 67 RGSELIGRGLPLCTQSETIAPYGGAIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 126 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ + C G+ + S +GG+ Sbjct: 127 LVGGLRTLARGEHEPHLVL--DAFLLRSLAVNGYAPSFSNCAKCGMPGPNRFFSVAAGGS 184 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 VC +P A+ +++L + L + +T DA ++ L +L+ + Sbjct: 185 VCVDCRVPGSVVPSAQALVLLGALLTGDWETADACEPRYVREGSGLVSAYLHWHL 239 >gi|330469589|ref|YP_004407332.1| DNA repair protein reco [Verrucosispora maris AB-18-032] gi|328812560|gb|AEB46732.1| DNA repair protein reco [Verrucosispora maris AB-18-032] Length = 270 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L V+ GE + I+ ++TR++GR R + + + L+ V + Sbjct: 9 YRDDAVVLRVQKLGESDRIVTLLTRRHGRLRAVARGVRRTTSKFGARLEPFGHVDLQLAG 68 Query: 61 RLAQNLGE-----FRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDM 113 LG + E ++ + + L + R P EREP L L+ + Sbjct: 69 DPKGELGSSLHTVSQVEGIDLYGKRFLGDYPRYTAASAIAETAERLTPVEREPSLRLFQL 128 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + + + LL+ + G+ LT C V G S +GGA Sbjct: 129 TLGALRALAQGEHAITLVL--DAYLLRGMALAGWAPALTACAVCGTPGRHRAFSVPAGGA 186 Query: 171 VCRSV 175 VC Sbjct: 187 VCPDC 191 >gi|322420171|ref|YP_004199394.1| DNA repair protein RecO [Geobacter sp. M18] gi|320126558|gb|ADW14118.1| DNA repair protein RecO [Geobacter sp. M18] Length = 212 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 5/169 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + + I+L + +GE + I+ + T + G+ G R + R + L+ +++ Sbjct: 5 EAEGIVLRLTDFGEADRIVTMFTLEQGKLQGVARGAKRSRKRFAGALEPFAHLKLQLH-- 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNC 120 L L + + + + L L PE EP L+ +L +L Sbjct: 63 LGTGLATLSSADIVGIFPGIRADLTKIGCAAYACELVERLTPEDEPSPRLFRLLYCYLER 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + LLK +G+ DL ++ T LL + ++G Sbjct: 123 LNEAPASPSDRRFFAVNLLKILGYQPDLQLRAISEETATLLARAMRTGR 171 >gi|325577292|ref|ZP_08147776.1| recombination protein O [Haemophilus parainfluenzae ATCC 33392] gi|325160874|gb|EGC72995.1| recombination protein O [Haemophilus parainfluenzae ATCC 33392] Length = 234 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 9/153 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 6 GFVLHRRPYSETSLLVDLFTEETGRLTVIAKGARAKRSAWKSVLQPFTPLLLRWSGK--- 62 Query: 65 NLGEFRFEVLESHCAKLL-SSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 G + A L LY G + R + +L+ L Sbjct: 63 --GALKTLTKAEPAAITLPLQQTALYSGFYVNELITRVIEPETANPQLFQHYLQCLTGLA 120 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + E LLK +G+G+D C +G Sbjct: 121 TQPQVEPTLRLFEFHLLKILGYGIDFLHCAGSG 153 >gi|225024982|ref|ZP_03714174.1| hypothetical protein EIKCOROL_01871 [Eikenella corrodens ATCC 23834] gi|224942212|gb|EEG23421.1| hypothetical protein EIKCOROL_01871 [Eikenella corrodens ATCC 23834] Length = 246 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A +L + E +++ E+ +R YGR R+ + + ++ +L V+V W + Sbjct: 11 PAFLLSATPWRETSLLAELFSRDYGRVAVVARSARKRQSELRGVLVPFVPVQVAWYGKE- 69 Query: 64 QNLGEFRFEVLESHCAKLLS------SSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 E+ H A+ L L GL + + +P LY+ L Sbjct: 70 --------ELKTLHRAEWLGGWPQPQGRALLSGLYVNELVQKLTAREDPQPALYEALRQV 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK----CVVTGVTQDLLWVSPKSG 168 + + + E LL G+ DL K C V Q W+ P+ Sbjct: 122 MRTLCTEPNHAAVLRRFEWTLLTLAGYAPDLQKDSAGCPVEADRQ--YWLQPEHA 174 >gi|328554262|gb|AEB24754.1| DNA repair protein RecO [Bacillus amyloliquefaciens TA208] gi|328912659|gb|AEB64255.1| DNA double strand break repair and recombination factor [Bacillus amyloliquefaciens LL3] Length = 255 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGARKSASRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + E++ S L Y + E++P L++++ Sbjct: 59 LMQRTSGLGTLQQGEMILSMRTIREDLFLTAYAAFIAELTDKGTEEKKPNPYLFELILES 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + I +++ +L +G +L CV S + G +C Sbjct: 119 FKRLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSRDGTFHFSVRDNGFICHRCFG 178 Query: 178 --PYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYKVPISPQTARLLRL 196 >gi|297199546|ref|ZP_06916943.1| DNA repair protein RecO [Streptomyces sviceus ATCC 29083] gi|197713528|gb|EDY57562.1| DNA repair protein RecO [Streptomyces sviceus ATCC 29083] Length = 250 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + ++S G + RF E EP ++ Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVSDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ + C G+T + S +GG+ Sbjct: 124 LVGALRTLARGEHAPHLVL--DAFLLRSLAVNGYAPSFSDCARCGMTGPNRFFSVAAGGS 181 Query: 171 VCRSVGLP 178 VC +P Sbjct: 182 VCVDCRVP 189 >gi|323704185|ref|ZP_08115764.1| DNA repair protein RecO [Thermoanaerobacterium xylanolyticum LX-11] gi|323536251|gb|EGB26023.1| DNA repair protein RecO [Thermoanaerobacterium xylanolyticum LX-11] Length = 248 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 70/185 (37%), Gaps = 17/185 (9%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLV 54 M + + ++I+L R GE + ++ + T+ G+ + ++ + + + G V Sbjct: 1 MKFIKTESIVLKSRLIGESDKVVTLFTKSNGKIDAIAKGARNSKSRYLGSSHPFSIGYYV 60 Query: 55 RVNWRSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 + + E++ S Y +++ L E E +Y Sbjct: 61 LF-------EGQNYYYIDQWELIHSFLKIDDDILKLSYASYFADIVYKLLEENEKNTNIY 113 Query: 112 DMLNIFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 ++L + K + + L + +G+ ++ C+ G ++++ SP GG Sbjct: 114 NLLKYSMFLLEKDLFDCDLLSITFCLKFVTFMGYMPEVHHCLSCGRDDNIMYFSPLKGGV 173 Query: 171 VCRSV 175 +CR Sbjct: 174 LCRDC 178 >gi|294629249|ref|ZP_06707809.1| DNA repair protein RecO [Streptomyces sp. e14] gi|292832582|gb|EFF90931.1| DNA repair protein RecO [Streptomyces sp. e14] Length = 248 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S SGG+ Sbjct: 124 LVGALRTLARGEHAPHLVL--DAFLLRSLAVNGYAPSFGDCARCGMPGPNRFFSVASGGS 181 Query: 171 VCRSVGLP 178 VC P Sbjct: 182 VCVDCRAP 189 >gi|325266693|ref|ZP_08133370.1| recombination protein O [Kingella denitrificans ATCC 33394] gi|324982136|gb|EGC17771.1| recombination protein O [Kingella denitrificans ATCC 33394] Length = 252 Score = 79.0 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 17/149 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLA 63 A +L + E ++ LEV +R YGR R+ ++ ++ IL + ++W + Sbjct: 10 PAFLLASSPWRENSLRLEVFSRDYGRVALLARSARARGSELRGILMPFVPLSISWFGKE- 68 Query: 64 QNLGEFRFEVLESHCAKLLS------SSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 E+ H A+ + + L L + L + +P LY L Sbjct: 69 --------ELKTLHRAEWVGGWQQPKNLLLFSALYANEILLKLTAREDPHPNLYHALAQL 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGL 146 + E LL +G+ Sbjct: 121 MQHFGTGQHHLAPLRHFEWQLLHELGYAP 149 >gi|302869287|ref|YP_003837924.1| DNA repair protein RecO [Micromonospora aurantiaca ATCC 27029] gi|315504238|ref|YP_004083125.1| DNA repair protein reco [Micromonospora sp. L5] gi|302572146|gb|ADL48348.1| DNA repair protein RecO [Micromonospora aurantiaca ATCC 27029] gi|315410857|gb|ADU08974.1| DNA repair protein RecO [Micromonospora sp. L5] Length = 290 Score = 79.0 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DDA++L V+ GE + I+ + TR++GR R + + L+ V + Sbjct: 9 YRDDAVVLRVQKLGESDRIITLFTRRHGRLRAVARGVRRTTSRFGARLEPFGHVDLQLAG 68 Query: 61 RLAQNLGE-----FRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDM 113 N G + E +E + + L + R P EREP L L+ + Sbjct: 69 DPKGNQGSSLHTVSQVEAIELYGKRFLGDYPRYTAASAIAETAERLTPVEREPSLRLFQL 128 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 + + + + LL+ + G+ L C V G S +GGA Sbjct: 129 TLGAMKSLARGEHATTLVL--DAYLLRGMAFAGWAPALAACAVCGEPGRHRAFSVPAGGA 186 Query: 171 VCRSV 175 VC Sbjct: 187 VCPDC 191 >gi|118594603|ref|ZP_01551950.1| DNA repair protein RecO [Methylophilales bacterium HTCC2181] gi|118440381|gb|EAV47008.1| DNA repair protein RecO [Methylophilales bacterium HTCC2181] Length = 237 Score = 79.0 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 58/145 (40%), Gaps = 5/145 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 IL + E ++I+E++++++GR + + R ++ +L ++ W L + Sbjct: 13 YILHTYPFKETSLIVEMLSKEFGRIAVAAKGARRPRSSLRGMLLPLQPLQATWSG-LNEL 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 E S + + G + R LP+ +P LYD + + Sbjct: 72 KTLHSIE--WSDQFLSIEGDALICGFYLNELMMRLLPKDDPHPALYDHYHQAVLALSKNK 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + + EL LL+ +G+ + L Sbjct: 130 GLSVTLRRFELRLLQELGYQVPLNN 154 >gi|183602375|ref|ZP_02963741.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis HN019] gi|219683310|ref|YP_002469693.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis AD011] gi|241191271|ref|YP_002968665.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196677|ref|YP_002970232.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254790512|sp|B8DSY8|RECO_BIFA0 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|183218294|gb|EDT88939.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis HN019] gi|219620960|gb|ACL29117.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis AD011] gi|240249663|gb|ACS46603.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251231|gb|ACS48170.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177386|gb|ADC84632.1| RecO [Bifidobacterium animalis subsp. lactis BB-12] gi|295794264|gb|ADG33799.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis V9] Length = 239 Score = 79.0 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 18/211 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVR-VNWR 59 ++D+A++L GE + I+ ++TR +G+ + + + + L+ V + Sbjct: 4 YRDEAVVLRTAKLGEADRIITLLTRDHGKVRAVAKGVRRTKSRFGARLEPFMRVDLLLGE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLP-EREPCLELYDMLNIF 117 R + E + ++ + ++ LP E EP Y +L Sbjct: 64 GRTFD--SVRQAESISAYAGGITGDYATYTAASAMCETAADLLPAEHEPAAAQYRLLIAA 121 Query: 118 LN----CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L P I ++ + L G+ + L CVV G QD+ + S +GGA+C Sbjct: 122 LGALSRHLHDPQAIALSYILRAMSL---AGWTIRLDSCVVCGS-QDVEFFSASAGGAMCP 177 Query: 174 SVGLPYAEKMLVLPSFLWKEEQTIDADSLKS 204 + P A ++ P ++ + + ++ Sbjct: 178 NDHTPDAVRV---PVHVFDQLRALEQGDWPQ 205 >gi|159039357|ref|YP_001538610.1| DNA repair protein RecO [Salinispora arenicola CNS-205] gi|157918192|gb|ABV99619.1| DNA repair protein RecO [Salinispora arenicola CNS-205] Length = 300 Score = 79.0 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L V+ GE + I+ ++TR +GR R + + + L+ V + Sbjct: 31 YRDDAVVLRVQKLGESDRIITLLTRGHGRLRAVARGVRRTTSKFGARLEPFGHVDLQLAG 90 Query: 61 RLAQNLGE-----FRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDM 113 N G + E ++ + + L + R P EREP L L+ + Sbjct: 91 DPKGNQGSSLHTISQVEGIDLYGKRFLGDYPRYTAASAVCETAERLTPVEREPSLRLFQL 150 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + + + LL+ + G+ L C V G S +GGA Sbjct: 151 TLGALRALAGGEHAATLVL--DAYLLRGMALAGWAPALAGCAVCGTPGRHRAFSVPAGGA 208 Query: 171 VCRSV 175 VC Sbjct: 209 VCLDC 213 >gi|268593248|ref|ZP_06127469.1| DNA repair protein RecO [Providencia rettgeri DSM 1131] gi|291311143|gb|EFE51596.1| DNA repair protein RecO [Providencia rettgeri DSM 1131] Length = 242 Score = 79.0 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 7/157 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T G+ + + +R ++ LQ + + W Sbjct: 4 WQ-RAFVLHSRPYSETSLLLDFFTEGEGKIRLLAKGARRNRSPLRGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + A L+ ++ GL R L P L+ L Sbjct: 63 K-GEIKTLINADPVSL--ALPLTGTVLYSGLYLNELTARVLEFGTPYSSLFFDYLSCLQI 119 Query: 121 HKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + EL LL +G+G+D C +G Sbjct: 120 LAASEHTPEFALRRFELALLSYLGYGVDFLHCAGSGE 156 >gi|261345439|ref|ZP_05973083.1| DNA repair protein RecO [Providencia rustigianii DSM 4541] gi|282566486|gb|EFB72021.1| DNA repair protein RecO [Providencia rustigianii DSM 4541] Length = 243 Score = 78.6 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 7/157 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T G+ + + +R ++ LQ + + W Sbjct: 4 WQ-RAFVLHSRPYSETSLLLDFFTEGEGKIRLLAKGARRNRSPLRGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + A LS ++ GL R L P L+ L Sbjct: 63 K-GEIKTLINADPVSL--ALPLSGTVLYSGLYLNELTARVLEFGTPYSALFFDYLSCLQV 119 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 + ++ EL LL +G+G+D C +G Sbjct: 120 LAGSERTPESALRQFELALLSYLGYGVDFLHCAGSGE 156 >gi|310822251|ref|YP_003954609.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] gi|309395323|gb|ADO72782.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] Length = 244 Score = 78.6 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 11/182 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR 59 + D+A++L YGE + ++ ++TRQ+G+ F + R L+ +RV+ Sbjct: 3 RFVDEALVLSTVDYGEADRMVTLLTRQHGKLTAFAAGARKSKRRFAGALEPFMYLRVH-- 60 Query: 60 SRLAQNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 L + G ++L + A L L ++ + EP EL+ +L Sbjct: 61 --LVETRGSTVRLDSTDILAGYYAARQELPLIARALYAVEMCRELTRDHEPHPELFALLE 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRS 174 +L + EL L + G C + G + GGAVC Sbjct: 119 EYLVRLNAKEAGPTSLLAFELSALAHAGLMPRFDACALCGGEPGERPRFDQAHGGAVCEP 178 Query: 175 VG 176 G Sbjct: 179 CG 180 >gi|154686788|ref|YP_001421949.1| DNA repair protein RecO [Bacillus amyloliquefaciens FZB42] gi|166221883|sp|A7Z6U2|RECO_BACA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|154352639|gb|ABS74718.1| RecO [Bacillus amyloliquefaciens FZB42] Length = 255 Score = 78.6 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 74/198 (37%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGARKSASRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + E++ S L Y + E++P L++++ Sbjct: 59 LMQRTSGLGTLQQGEMILSMRTIREDLFLTAYAAFIAELTDKGTEEKKPNPYLFELILES 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + I +++ +L +G +L CV + S + G +C Sbjct: 119 FKRLNDGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSGEGTFHFSIRDNGFICHRCFE 178 Query: 178 --PYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYRVPMSPQTARLLRL 196 >gi|290960571|ref|YP_003491753.1| recombination protein O [Streptomyces scabiei 87.22] gi|260650097|emb|CBG73213.1| Recombination protein O [Streptomyces scabiei 87.22] Length = 250 Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 5 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 64 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ LG + E + + ++S G + RF E EP ++ Y + Sbjct: 65 RGSELLGRGLPLCTQSETIAPYGGGIVSDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 124 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S +GG+ Sbjct: 125 LVGALRTLARGEHAPHLVL--DAFLLRSLAVNGYAPSFGDCAKCGMPGPNRFFSVAAGGS 182 Query: 171 VCRSVGLP 178 VC +P Sbjct: 183 VCVDCRVP 190 >gi|56963448|ref|YP_175179.1| DNA repair protein RecO [Bacillus clausii KSM-K16] gi|61214764|sp|Q5WHD7|RECO_BACSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56909691|dbj|BAD64218.1| DNA repair protein RecO [Bacillus clausii KSM-K16] Length = 256 Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 12/182 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVR 55 M + DAI+L YGE N I+ + T++ G+ + + R + Q G+ + Sbjct: 1 MLKKQDAIVLKSIDYGETNKIVTLFTKEDGKLAVLAKGAKKPNSRFAAVTQPFVYGSYLY 60 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 L + E ++S Y + + ER+P L+D L Sbjct: 61 FQGNG-----LPSLSQGEAVDSFKELQFDIVKSAYAAYITELVDKLTEERKPTFFLFDWL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCR 173 + L I +++ +L G +L C T+D + S G +C Sbjct: 116 LLALRQINTGQDAEIIARIMDMKMLPLAGAKPELDCCACCRSETRDPVAFSVAYAGFLCS 175 Query: 174 SV 175 + Sbjct: 176 NC 177 >gi|51891706|ref|YP_074397.1| DNA repair and genetic recombination protein [Symbiobacterium thermophilum IAM 14863] gi|61214898|sp|Q67RZ0|RECO_SYMTH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|51855395|dbj|BAD39553.1| DNA repair and genetic recombination protein [Symbiobacterium thermophilum IAM 14863] Length = 253 Score = 78.3 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 10/184 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 + D I++ VR++ + + I+ ++TR+ G+ R + R + Q + VR + Sbjct: 4 YNVDGIVIRVRNFQDADKIVVLLTREEGKVEAVARGARRPRNRFAAATQLFSHVRAQLFS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R L + E++ES Y + + LPER+ Y +L L+ Sbjct: 64 GRSLDTLS--QVEIVESFRQLREDLVRMAYATYACELVDALLPERQRQEAPYLLLLTSLH 121 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV----TQDLLWVSPKSGGAVCRS 174 P + ++ EL LL +GF L CV G + +P GG +C Sbjct: 122 LWGEPDRDPEPLLRAFELKLLSMLGFRPSLAACVGCGSEAVQQNGGVRFAPVLGGVLCPQ 181 Query: 175 VGLP 178 Sbjct: 182 CTDE 185 >gi|198283251|ref|YP_002219572.1| DNA repair protein RecO [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665687|ref|YP_002425834.1| DNA repair protein RecO, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|254790501|sp|B7J9K3|RECO_ACIF2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790502|sp|B5EQL5|RECO_ACIF5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|198247772|gb|ACH83365.1| DNA repair protein RecO [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517900|gb|ACK78486.1| DNA repair protein RecO, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 255 Score = 78.3 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 4/156 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-LQAGNLVRVNWRSRLA 63 D A +L YG+ ++I+E+ TR GR + + R ++AG + V W R Sbjct: 7 DRAWVLHHYPYGDTSLIVELFTRTQGRLGVLAKGARRARSALARIEAGRPLWVRWLGR-G 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + E L +L L+ + + L R R+P +L+ + ++ Sbjct: 66 ELPVLAQAEELGPFLPLNPLQNLSLFYVNEL--LLRLTQRRDPFPDLFQVYEETIDALCS 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 G + E LL+N+G+ DL C G + D Sbjct: 124 EPGEGWYLRRFERRLLENLGWAPDLAHCAECGRSPD 159 >gi|90021886|ref|YP_527713.1| DNA replication and repair protein RecO [Saccharophagus degradans 2-40] gi|89951486|gb|ABD81501.1| DNA replication and repair protein RecO [Saccharophagus degradans 2-40] Length = 235 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRL 62 D+A IL R+Y + II+E T +GR G R + +P Q L ++WR Sbjct: 10 TDNAYILHSRAYTDSRIIIEFFTENHGRVAGIFRLPSKKRHFKP--QPFTLYTIHWR--- 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNI 116 + E+ ++++ L G S L R L + +P E++ N Sbjct: 65 ------WGAELKTILFLDPIANAEALVGKASYCGLYLNELVLRLLSKEDPSPEIFAAYNA 118 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 L + EL +L +G+ +D Sbjct: 119 ALKGLVGGQELEAPLRHFELGILAELGYAVDFD 151 >gi|146281617|ref|YP_001171770.1| DNA repair protein RecO [Pseudomonas stutzeri A1501] gi|172045571|sp|A4VIX7|RECO_PSEU5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145569822|gb|ABP78928.1| DNA repair protein RecO [Pseudomonas stutzeri A1501] Length = 236 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 5/144 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R Y E + ++++ T Q GR +R + +++ + V R + ++ Sbjct: 11 PAFVLHSRPYKESSALVDLFTPQ-GRLRAVMRAARGKAGS-LIRPFVSLEVELRGK-SEL 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 R E + A L G+ L R LP + L++ L Sbjct: 68 KTVARLE--SAGPAHWLDGQALFSGMYLNELLIRLLPAEDAHPALFEHYVATLPALAEHR 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLT 149 + + E LL +G+G L Sbjct: 126 PLEPLLRAFEWRLLDELGYGFALD 149 >gi|5114185|gb|AAD40231.1|AF123492_3 RecO [Pseudomonas aeruginosa] Length = 203 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 7/143 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTPL-GRLRAVLRGARGKAGA-LARPFVPLEAEWRGRGE---- 63 Query: 68 EFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 LES L + L+ GL L R LP +P E++ L Sbjct: 64 LKTVARLESAGVPNLLNGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRP 123 Query: 127 IGKIFVQIELMLLKNIGFGLDLT 149 I + E LL+ +G+G L Sbjct: 124 IEPLLRAFEWRLLEQLGYGFALD 146 >gi|327479796|gb|AEA83106.1| DNA repair protein RecO [Pseudomonas stutzeri DSM 4166] Length = 229 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 5/144 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R Y E + ++++ T Q GR +R + +++ + V R + ++ Sbjct: 4 PAFVLHSRPYKESSALVDLFTPQ-GRLRAVMRAARGKAGS-LIRPFVSLEVELRGK-SEL 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 R E + A L G+ L R LP + L++ L Sbjct: 61 KTVARLE--SAGPAHWLDGQALFSGMYLNELLIRLLPAEDAHPALFEHYVATLPALAEHR 118 Query: 126 VIGKIFVQIELMLLKNIGFGLDLT 149 + + E LL +G+G L Sbjct: 119 PLEPLLRAFEWRLLDELGYGFALD 142 >gi|306828474|ref|ZP_07461669.1| recombination protein O [Streptococcus mitis ATCC 6249] gi|304429273|gb|EFM32358.1| recombination protein O [Streptococcus mitis ATCC 6249] Length = 256 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 79/205 (38%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G GL+ +CV S K G +C Sbjct: 123 MEEGLDYQVLTNIFEIQILNRFGIGLNFNECVFCHRVGQAFDFSFKYGACLCPDHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 ++ + P +L + Q ID ++L+ Sbjct: 183 KRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|282861797|ref|ZP_06270861.1| DNA repair protein RecO [Streptomyces sp. ACTE] gi|282563613|gb|EFB69151.1| DNA repair protein RecO [Streptomyces sp. ACTE] Length = 248 Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 98/235 (41%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + +++ + G + RF E EP ++ Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGGGIVADYGRYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S SGG Sbjct: 124 LVGGLRTLARAEHAPNLIL--DAFLLRSLAVNGYAPSFDDCARCGMPGPNRFFSVASGGV 181 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 VC +P AE + +L + L + +T DA ++ L +L+ + Sbjct: 182 VCGDCRVPGSVVPSAEAVELLSALLTGDWETADASQARHVREGSGLVSAYLHWHL 236 >gi|15595969|ref|NP_249463.1| DNA repair protein RecO [Pseudomonas aeruginosa PAO1] gi|107100233|ref|ZP_01364151.1| hypothetical protein PaerPA_01001256 [Pseudomonas aeruginosa PACS2] gi|218893285|ref|YP_002442154.1| DNA repair protein RecO [Pseudomonas aeruginosa LESB58] gi|12644687|sp|Q9XCX7|RECO_PSEAE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737868|sp|B7UYX0|RECO_PSEA8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|9946661|gb|AAG04161.1|AE004512_4 DNA repair protein RecO [Pseudomonas aeruginosa PAO1] gi|218773513|emb|CAW29325.1| DNA repair protein RecO [Pseudomonas aeruginosa LESB58] Length = 233 Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 7/143 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTPL-GRLRAVLRGARGKAGA-LARPFVPLEAEWRGRGE---- 63 Query: 68 EFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 LES L + L+ GL L R LP +P E++ L Sbjct: 64 LKTVARLESAGVPNLLNGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRP 123 Query: 127 IGKIFVQIELMLLKNIGFGLDLT 149 I + E LL+ +G+G L Sbjct: 124 IEPLLRAFEWRLLEQLGYGFALD 146 >gi|149926462|ref|ZP_01914723.1| DNA repair protein RecO [Limnobacter sp. MED105] gi|149824825|gb|EDM84039.1| DNA repair protein RecO [Limnobacter sp. MED105] Length = 244 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 17/152 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 D A +L Y E ++I+E+ +++GR + + ++ +L + + V + + Sbjct: 8 TDFAYVLHSVPYKETSLIVELFCKEHGRLPVVAKGAKRPHSGLRAVLVSFQPLSVRFTGK 67 Query: 62 LAQNLGEFRFEVLESHCAKLLS-----SSLFLYGLQSI-VPLFRFLPEREPCLELYDMLN 115 EV A+ L L+ + L R L + +L+++ Sbjct: 68 S---------EVKTLMQAEWLGGLMSPDGKALFAAYYLNELLMRGLSREDTHPDLFELYQ 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L + Q E+ LL+++G+GLD Sbjct: 119 NTLLGLAGGDDMNVCVRQFEVGLLQSLGYGLD 150 >gi|291613751|ref|YP_003523908.1| DNA repair protein RecO [Sideroxydans lithotrophicus ES-1] gi|291583863|gb|ADE11521.1| DNA repair protein RecO [Sideroxydans lithotrophicus ES-1] Length = 243 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 17/160 (10%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L + E ++ILEV +R++GR R + ++ +L ++++W + Sbjct: 13 EPAFVLHSYPFRETSLILEVFSRRHGRVALVARGARRPRSALRGLLMGFQPLQMSWFGKH 72 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNI 116 E+ H A+ L G + L + +P L+D Sbjct: 73 ---------ELRTLHSAEWQGGQPQLQGTALLCGFYLNELLLNLMARDDPHESLFDYYLQ 123 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L E +L+ +G+ L L +G Sbjct: 124 TLQRLAQEDDHAFTLRCFEKHMLQELGYALLLENEADSGS 163 >gi|152985424|ref|YP_001350089.1| DNA repair protein RecO [Pseudomonas aeruginosa PA7] gi|166221905|sp|A6VAK4|RECO_PSEA7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150960582|gb|ABR82607.1| DNA repair protein RecO [Pseudomonas aeruginosa PA7] Length = 233 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 7/143 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T Q GR +R + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTAQ-GRLRAVLRGARGKAGA-LARPFVPLEAEWRGRGE---- 63 Query: 68 EFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 LES L S L+ GL L R LP +P E++ L Sbjct: 64 LKTVARLESAGIPNLLSGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRP 123 Query: 127 IGKIFVQIELMLLKNIGFGLDLT 149 + + E LL+ +G+G L Sbjct: 124 LEPLLRAFEWRLLEQLGYGFALD 146 >gi|313837266|gb|EFS74980.1| DNA repair protein RecO [Propionibacterium acnes HL037PA2] gi|314928059|gb|EFS91890.1| DNA repair protein RecO [Propionibacterium acnes HL044PA1] gi|314972037|gb|EFT16135.1| DNA repair protein RecO [Propionibacterium acnes HL037PA3] gi|328907183|gb|EGG26949.1| DNA repair protein RecO [Propionibacterium sp. P08] Length = 246 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 18/189 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D A++L GE + I+ +++R++G+ R + S + L NLV + + Sbjct: 4 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGVRRTSSKFGARLDPFNLVDLQLVQ 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 R + + E L + A L +LF + +P +REP Y +L Sbjct: 64 GRNLDVIS--QVECLHPYSAPLRQDYALFTAAEVMVEAADHLVPVDREPAPAQYRLLAGA 121 Query: 118 LNCHKI--------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L P ++ ++ L L G+ DL CV SP GG Sbjct: 122 LRVLGQGTTDGPRPPEMVLDSYL---LRSLSAAGYAPDLVDCVQCRTPGPHPGFSPSLGG 178 Query: 170 AVCRSVGLP 178 VC + P Sbjct: 179 VVCINCQPP 187 >gi|183599775|ref|ZP_02961268.1| hypothetical protein PROSTU_03283 [Providencia stuartii ATCC 25827] gi|188022039|gb|EDU60079.1| hypothetical protein PROSTU_03283 [Providencia stuartii ATCC 25827] Length = 242 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R + E +++++ T G+ + + +R + LQ + + W Sbjct: 4 WQ-RAFVLHSRPFSETSLLVDFFTEGEGKIRLLAKGARRNRSPFRGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELYDML 114 + E+ A +S SL L GL + R + P L+ Sbjct: 63 K---------GEIKTLTHADPISLSLPLTGTVLYSGLYLNELVTRVIEFGTPYSALFFDY 113 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV 156 L + ++ EL LL +G+G+D C +G Sbjct: 114 LSCLQLLAASEHTPEAALRQFELALLSYLGYGVDFLHCAGSGE 156 >gi|302551286|ref|ZP_07303628.1| DNA repair protein RecO [Streptomyces viridochromogenes DSM 40736] gi|302468904|gb|EFL31997.1| DNA repair protein RecO [Streptomyces viridochromogenes DSM 40736] Length = 248 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 + ++ +G + E + + ++S G + RF E EP ++ Y + Sbjct: 64 KGSELVGRGLPLCTQSETIAPYGGGIVSDYARYTAGTVMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ T C G+ + S SGG+ Sbjct: 124 LVGGLRTLARGEHAPHLVL--DAFLLRSLAVNGYAPSFTDCAKCGMPGPNRFFSVASGGS 181 Query: 171 VCRSVGLP 178 VC +P Sbjct: 182 VCVDCRVP 189 >gi|121996842|ref|YP_001001629.1| DNA repair protein RecO [Halorhodospira halophila SL1] gi|171769496|sp|A1WT15|RECO_HALHL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|121588247|gb|ABM60827.1| DNA replication and repair protein RecO [Halorhodospira halophila SL1] Length = 234 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 85/230 (36%), Gaps = 13/230 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R++ E + ++E+ +++YGR + L+ ++V+WR R Sbjct: 8 PAWVLHRRAFRESSTLVELFSQEYGRIGAVANGVRRRGWSGQLEPFIPLQVSWRGRGD-- 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L V ++ L G L +P ++ + ++C Sbjct: 66 LKTLTT-VDQAGRGYALRGGALACGFYMAEVLLALTRREDPHPRTWERYAVAVDCLATDD 124 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSG--GAVCRSVGLPYA 180 + + EL LL+ G+GL+L + V G V Q SP+ G A G+ + Sbjct: 125 AEPAL-RRFELALLEESGYGLELEQ-DVHGEPVVAQARYRYSPERGADRAGTGECGVEVS 182 Query: 181 -EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR 229 +L L + + + + A +L + ++ + + R Sbjct: 183 GATLLALAA--TEGQGLSEEPVRSEARRLMRAVIQQHLGGRRLRSREMFR 230 >gi|304310581|ref|YP_003810179.1| Recombinational DNA repair protein (RecF pathway) [gamma proteobacterium HdN1] gi|301796314|emb|CBL44522.1| Recombinational DNA repair protein (RecF pathway) [gamma proteobacterium HdN1] Length = 241 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 12/143 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRH----LGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 A +L + + E + + EV R+ GR G R G S +LQ V V++ R Sbjct: 10 AYVLQAKPWQETSALAEVFCRESGRVSIAFRGVRRGGHSKSS--LLQPFQPVWVSYGGRH 67 Query: 63 AQNLGEFRFEVLESHCAK-LLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 G LES A LS + + G L R L + L+D L Sbjct: 68 ELRSGR----QLESRAASVWLSGNALISGFYLNELLVRLLQREDAHPRLFDAYEESLALL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGF 144 ++ + + E LL IG+ Sbjct: 124 YAGAIEPCLRI-FERKLLAEIGY 145 >gi|296120992|ref|YP_003628770.1| DNA repair protein RecO [Planctomyces limnophilus DSM 3776] gi|296013332|gb|ADG66571.1| DNA repair protein RecO [Planctomyces limnophilus DSM 3776] Length = 249 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 10/177 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG----NLVRVNWRSRL 62 A+IL V + E + I+ + +R++GR + G R++ ++ + V + + Sbjct: 8 ALILRVTDFSETSRIVVMFSREHGRFSALAKGG--RRLKGPFESSLDLLSTCDVVFLKKA 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFLNCH 121 + L L + LY + L L E +P E+YD L Sbjct: 66 SSGLDLLTEARLVHRFRPEPNQLNALYAGYYVAELILGLTEDYDPHPEIYDEAQKLLESL 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRSV 175 S + + EL++L+ G D C+ G L P GG +C + Sbjct: 126 ADASNLAIKLTRFELIMLRECGQLPDFETCMACGAELTEGRLFGFWPGQGGMICPAC 182 >gi|298369997|ref|ZP_06981313.1| DNA repair protein RecO [Neisseria sp. oral taxon 014 str. F0314] gi|298281457|gb|EFI22946.1| DNA repair protein RecO [Neisseria sp. oral taxon 014 str. F0314] Length = 250 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 17/155 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + A +L + E ++ LEV +R YGR R+ + + ++ +L + +W Sbjct: 8 HEPAFLLASVPWRESSLRLEVFSRSYGRVALLARSARKRQSELRGVLVPFVPMSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ L GL + R +P ELYD L Sbjct: 65 ------YGSGELKTLHRAEWLGGWPQPQGRALFSGLYVNELVLRLTAREDPQPELYDALQ 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L + E LL ++G+ DL + Sbjct: 119 DVLQTLCRQPNHAGALRRFEWKLLDSLGYAPDLQR 153 >gi|161831256|ref|YP_001597343.1| DNA repair protein RecO [Coxiella burnetii RSA 331] gi|189039654|sp|A9N940|RECO_COXBR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|161763123|gb|ABX78765.1| DNA repair protein RecO [Coxiella burnetii RSA 331] Length = 234 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 8/149 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A IL R Y ++ILE++T +GR R+ + R + L+ + + ++W R Sbjct: 8 EPAFILHRRPYSNTSLILELLTPNHGRVCALARSARGLKSRYKGKLELFSPLLISWSGRS 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +F +V + LL L G L R L +P L L+ L K Sbjct: 68 D---LKFLGDVEANGMPYLLEGEALLCGFYLNELLIRLLHHDDPYLRLFHHYQNTLE--K 122 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLTK 150 + + + ++ E LL +G+GL L+ Sbjct: 123 LVNGRLEATLRCFEKQLLDELGYGLPLSC 151 >gi|218288618|ref|ZP_03492895.1| DNA repair protein RecO [Alicyclobacillus acidocaldarius LAA1] gi|218241275|gb|EED08450.1| DNA repair protein RecO [Alicyclobacillus acidocaldarius LAA1] Length = 271 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 65/187 (34%), Gaps = 20/187 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------SHRMQPILQAGNLVRV 56 W +A+++ V YGE++ IL ++T G R G S + Q G V Sbjct: 5 WTTEAVVVRVVRYGERDAILTLLTET-GLVTAMARGGARPVGRLSAAARLCAQ-GTYVLY 62 Query: 57 NWRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDML 114 R +G+ R E+ A Y R +PER + Y Sbjct: 63 QGRG-----MGDVRQAEIARQRRALHEDVVKAAYAAYLCDLASRAIPERPDAPPAAYRQF 117 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV----TQDLLWVSPKSGG 169 L+ + V + + EL + +G G D C+ G T + P+ GG Sbjct: 118 VAVLDGLEADRVPADVLARAFELKVCAWLGVGPDWRVCIRCGAPLVETGEAPRYDPREGG 177 Query: 170 AVCRSVG 176 +C Sbjct: 178 LICSRCA 184 >gi|297160638|gb|ADI10350.1| DNA repair protein RecO [Streptomyces bingchenggensis BCW-1] Length = 249 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 20/226 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLGEFRF------EVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYD 112 R L E + + + +++ G + RF E EP ++ Y Sbjct: 64 RGGGELVGRGLPLCTQSETIAPYGSAIVTDYARYTAGTAMLETAERFTDHEGEPAMQQYL 123 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGG 169 +L L + + + LL+++ G+ C G+ + S +GG Sbjct: 124 LLVGALRTLASGEHEPHLIL--DAFLLRSLAVNGYAPSFDNCAKCGMPGPNRFFSVGAGG 181 Query: 170 AVCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTD 210 +C +P AE +++L + L + +T DA + A + + Sbjct: 182 VICGECRVPGSVVPSAEALMLLGALLTGDWETADACEARHAREGSG 227 >gi|254239134|ref|ZP_04932457.1| DNA repair protein RecO [Pseudomonas aeruginosa C3719] gi|126171065|gb|EAZ56576.1| DNA repair protein RecO [Pseudomonas aeruginosa C3719] Length = 233 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 7/143 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTPL-GRLRAVLRGARGKAGA-LARPFVPLEAEWRGRGE---- 63 Query: 68 EFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 LES L + L+ GL L R LP +P E++ L Sbjct: 64 LKTVARLESAGIPNLLNGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRP 123 Query: 127 IGKIFVQIELMLLKNIGFGLDLT 149 I + E LL+ +G+G L Sbjct: 124 IEPLLRAFEWRLLEQLGYGFALD 146 >gi|29654792|ref|NP_820484.1| DNA repair protein [Coxiella burnetii RSA 493] gi|153208695|ref|ZP_01946942.1| DNA repair protein RecO [Coxiella burnetii 'MSU Goat Q177'] gi|154706512|ref|YP_001423901.1| DNA repair protein [Coxiella burnetii Dugway 5J108-111] gi|165919322|ref|ZP_02219408.1| DNA repair protein RecO [Coxiella burnetii RSA 334] gi|212212138|ref|YP_002303074.1| DNA repair protein [Coxiella burnetii CbuG_Q212] gi|212219220|ref|YP_002306007.1| DNA repair protein [Coxiella burnetii CbuK_Q154] gi|1710073|sp|P51838|RECO_COXBU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189039653|sp|A9KFA2|RECO_COXBN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058642|sp|B6J4J7|RECO_COXB1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058643|sp|B6IZ01|RECO_COXB2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|439873|gb|AAA69692.1| putative [Coxiella burnetii] gi|29542060|gb|AAO90998.1| DNA repair protein [Coxiella burnetii RSA 493] gi|120575806|gb|EAX32430.1| DNA repair protein RecO [Coxiella burnetii 'MSU Goat Q177'] gi|154355798|gb|ABS77260.1| DNA repair protein [Coxiella burnetii Dugway 5J108-111] gi|165916982|gb|EDR35586.1| DNA repair protein RecO [Coxiella burnetii RSA 334] gi|212010548|gb|ACJ17929.1| DNA repair protein [Coxiella burnetii CbuG_Q212] gi|212013482|gb|ACJ20862.1| DNA repair protein [Coxiella burnetii CbuK_Q154] Length = 231 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 8/149 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A IL R Y ++ILE++T +GR R+ + R + L+ + + ++W R Sbjct: 8 EPAFILHRRPYSNTSLILELLTPNHGRVCALARSARGLKSRYKGKLELFSPLLISWSGRS 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +F +V + LL L G L R L +P L L+ L K Sbjct: 68 D---LKFLGDVEANGMPYLLEGEALLCGFYLNELLIRLLHHDDPYLRLFHHYQNTLE--K 122 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLTK 150 + + + ++ E LL +G+GL L+ Sbjct: 123 LVNGRLEATLRCFEKQLLDELGYGLPLSC 151 >gi|304316660|ref|YP_003851805.1| DNA repair protein RecO [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778162|gb|ADL68721.1| DNA repair protein RecO [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 248 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 73/191 (38%), Gaps = 17/191 (8%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLV 54 M + + ++I+L R GE + ++ + T+ G+ + ++ + + + G V Sbjct: 1 MKFIKTESIVLKSRLIGESDKVITLFTKTNGKIQAIAKGARNSKSRFLGSSHPFSIGYYV 60 Query: 55 RVNWRSRLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 + + E++ S Y +++ L + + + +Y Sbjct: 61 LFH-------GQNYYYVDQWELIHSFLKIDDDILKLSYASYFADVVYKLLQDDDRNINIY 113 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 ++L L + SV + V L + +G+ ++ CV G L++ SP GG Sbjct: 114 NLLKYSLLLLEKGSVNNDLLAVLFNLKFVTFMGYMPEVDHCVSCGKKDKLVYFSPAKGGV 173 Query: 171 VCRSVGLPYAE 181 +C + + Sbjct: 174 LCNNCKSAVDD 184 >gi|116048688|ref|YP_792512.1| DNA repair protein RecO [Pseudomonas aeruginosa UCBPP-PA14] gi|254245027|ref|ZP_04938349.1| DNA repair protein RecO [Pseudomonas aeruginosa 2192] gi|296390878|ref|ZP_06880353.1| DNA repair protein RecO [Pseudomonas aeruginosa PAb1] gi|313105594|ref|ZP_07791860.1| DNA repair protein RecO [Pseudomonas aeruginosa 39016] gi|122257794|sp|Q02HS4|RECO_PSEAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115583909|gb|ABJ09924.1| DNA repair protein RecO [Pseudomonas aeruginosa UCBPP-PA14] gi|126198405|gb|EAZ62468.1| DNA repair protein RecO [Pseudomonas aeruginosa 2192] gi|310878362|gb|EFQ36956.1| DNA repair protein RecO [Pseudomonas aeruginosa 39016] Length = 233 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 7/143 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTPL-GRLRAVLRGARGKAGA-LARPFVPLEAEWRGRGE---- 63 Query: 68 EFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 LES L + L+ GL L R LP +P E++ L Sbjct: 64 LKTVARLESAGIPNLLNGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRP 123 Query: 127 IGKIFVQIELMLLKNIGFGLDLT 149 I + E LL+ +G+G L Sbjct: 124 IEPLLRAFEWRLLEQLGYGFALD 146 >gi|329934670|ref|ZP_08284711.1| DNA recombination and repair protein RecO [Streptomyces griseoaurantiacus M045] gi|329305492|gb|EGG49348.1| DNA recombination and repair protein RecO [Streptomyces griseoaurantiacus M045] Length = 248 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 95/235 (40%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 + ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 KGSELIGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S SGG Sbjct: 124 LVGGLRTLSRDEHAPHLVL--DAFLLRSLAVNGYAPSFGDCAKCGMPGPNRFFSVASGGV 181 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 VC +P + + +L + L + T DA ++ L +L+ + Sbjct: 182 VCADCRVPGSVVPSPQALELLGALLTGDWATADACEARHVREGSGLVSAYLHWHL 236 >gi|308174316|ref|YP_003921021.1| DNA double strand break repair and homologous recombination factor [Bacillus amyloliquefaciens DSM 7] gi|307607180|emb|CBI43551.1| DNA double strand break repair and homologous recombination factor [Bacillus amyloliquefaciens DSM 7] Length = 255 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGEMNKIVTLLTREHGKIGVMARGARKSASRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG + E++ S L Y + E++P L++++ Sbjct: 59 LMQRTSGLGTLQQGEMILSMRTIREDLFLTAYAAFIAELTDKGTEEKKPNPYLFELILES 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + I +++ +L +G +L CV S + G +C Sbjct: 119 FKRLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSRDGTFHFSVRDNGFICHRCFG 178 Query: 178 --PYA-------EKMLVL 186 PY ++L L Sbjct: 179 KDPYKVPISPQTARLLRL 196 >gi|145300359|ref|YP_001143200.1| DNA repair protein RecO [Aeromonas salmonicida subsp. salmonicida A449] gi|142853131|gb|ABO91452.1| DNA repair protein RecO [Aeromonas salmonicida subsp. salmonicida A449] Length = 235 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 5/146 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A ++ R Y E + ++EV T+ GR R + R ++ +LQ +L+ ++WR + Sbjct: 4 PAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPLKGLLQPFSLLTISWRGK-G 62 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E + H +L LF YGL ++ L P E++D L Sbjct: 63 DLKNLAQVECPD-HSLRLGGDRLF-YGLYLNELVYYLLEAHTPFPEVFDAYARALMALAD 120 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLT 149 + E +LL+ +G+ +D Sbjct: 121 GETPELPLRRFEFLLLQALGYAVDFE 146 >gi|251793348|ref|YP_003008076.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700] gi|247534743|gb|ACS97989.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700] Length = 214 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 11/146 (7%) Query: 23 EVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAK 80 ++ T +GR + ++ R ++ +LQ + + W R G+ + A Sbjct: 2 DLFTEDFGRLSVLAKGVRAKRSMLKGVLQPFTPLLLRWSGR-----GDLKVLTKAEPAAI 56 Query: 81 LL-SSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELML 138 L + LY G + R L +L+ L + + E L Sbjct: 57 ALPLQHVALYSGFYLNELICRVLEPETAYPQLFQQYLHCLTRLAVNQDVEPALRTFEFQL 116 Query: 139 LKNIGFGLDLTKCVVTG--VTQDLLW 162 L+ +G+G+D T C +G V D+ + Sbjct: 117 LRTLGYGIDFTHCAGSGKAVEADMTY 142 >gi|258511946|ref|YP_003185380.1| DNA repair protein RecO [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478672|gb|ACV58991.1| DNA repair protein RecO [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 271 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 65/187 (34%), Gaps = 20/187 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------SHRMQPILQAGNLVRV 56 W +A+++ V YGE++ IL ++T G R G S + Q G V Sbjct: 5 WTTEAVVVRVVRYGERDAILTLLTET-GLVTAMARGGARPVGRLSAAARLCAQ-GTYVLY 62 Query: 57 NWRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDML 114 R +G+ R E+ A Y R +PER + Y Sbjct: 63 QGRG-----MGDVRQAEIARQRRALHEDVVKAAYAAYLCDLASRAIPERPDAPPAAYRQF 117 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV----TQDLLWVSPKSGG 169 L+ + V + + EL + +G G D C+ G T + P+ GG Sbjct: 118 VAVLDGLEADRVPADVLARAFELKVCAWLGVGPDWRVCIRCGAPLVETGEAPRYDPREGG 177 Query: 170 AVCRSVG 176 +C Sbjct: 178 LICPRCA 184 >gi|256787868|ref|ZP_05526299.1| DNA repair protein RecO [Streptomyces lividans TK24] gi|289771752|ref|ZP_06531130.1| DNA repair protein RecO [Streptomyces lividans TK24] gi|289701951|gb|EFD69380.1| DNA repair protein RecO [Streptomyces lividans TK24] Length = 251 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 7 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 66 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 + ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 67 KGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 126 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S SGG+ Sbjct: 127 LVGALRTLARGEHAPNLVL--DAFLLRSLAVNGYAPTFGDCAKCGMPGPNRFFSVGSGGS 184 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 VC +P + + +L + L + T DA ++ L +L+ + Sbjct: 185 VCVDCRVPGSVVPSPQALELLGALLTGDWGTADAAEPRYVREGSGLVSAYLHWHL 239 >gi|328882348|emb|CCA55587.1| DNA recombination and repair protein RecO [Streptomyces venezuelae ATCC 10712] Length = 249 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 78/188 (41%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRTLARGEHAPHLIL--DAFLLRSLAVNGYAPSFEDCAKCGIHGPNRFFSVAAGGV 181 Query: 171 VCRSVGLP 178 +C +P Sbjct: 182 ICGDCRVP 189 >gi|307545608|ref|YP_003898087.1| DNA repair protein RecO [Halomonas elongata DSM 2581] gi|307217632|emb|CBV42902.1| DNA repair protein RecO [Halomonas elongata DSM 2581] Length = 233 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L R Y E + ++E++T +GR R Q R++ +LQ + V W Sbjct: 4 EPAYLLHKRPYRETSALVELLTFHHGRVRAVARGVQRPGSRLRAVLQPFAPLHVTWSGSG 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 R ++ES + + L GL + L R LP P +++ L+ Sbjct: 64 D----LKRLGLMESRGSAAMLVGEGLLCGLYANELLARLLPVEMPVDDVFAFYAAALDAL 119 Query: 122 KIPSVIGKI 130 PS Sbjct: 120 PQPSGRAVA 128 >gi|288941440|ref|YP_003443680.1| DNA repair protein RecO [Allochromatium vinosum DSM 180] gi|288896812|gb|ADC62648.1| DNA repair protein RecO [Allochromatium vinosum DSM 180] Length = 243 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 76/224 (33%), Gaps = 13/224 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQ 64 A +L R YG +++LE++ GR + + +LQ + + R Sbjct: 10 AFVLHRREYGNTSLLLEILGAGQGRCAAIAKGARRPRRTASALLQPFQPLWLAMTGRGEV 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 V E+ L + L G L R L +P L+ L+ Sbjct: 70 R--TLTV-VEEAGAPLALQGASLLAGFYLNELLLRMLARHDPHDALFVFYQSTLSHLAEA 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E LL +G+GL L + V G VT D ++V + C G + Sbjct: 127 DDLETPLRHFECRLLAELGYGLRLDRVVDDGAPVTADAVYVYERE-RGPCYPSGPARGPR 185 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH 226 + ++ + + + A L ++ L+ ++ Sbjct: 186 VSGATLLALAHDEPLAGEQRREART-----LLRHVLEPHLGDRP 224 >gi|219670279|ref|YP_002460714.1| DNA repair protein RecO [Desulfitobacterium hafniense DCB-2] gi|254790519|sp|B8FUK8|RECO_DESHD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219540539|gb|ACL22278.1| DNA repair protein RecO [Desulfitobacterium hafniense DCB-2] Length = 273 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 16/182 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + DA+++ R YGE + +L + +R+YG+ + + + + +AG + L Sbjct: 4 YHADALVIRSREYGESDRLLTLFSREYGKIQAVAKGVRKPKSRQ--RAGAQLFTYAEYLL 61 Query: 63 AQNLGEFRFEVLESH--CAKLLSSSLFLYGLQSIVPL--FRFLPEREPCLELYDML--NI 116 + + L + ++ L LP +P EL+ + ++ Sbjct: 62 HKGKSLDTVNQVSPRESFPHLWTDLDMSMAATAMAELLDLATLP-GQPHPELFTLTFSSL 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCR 173 FL P+++ + L L+ +G+ L +C G + LL+ SP +GG VCR Sbjct: 121 FLVESCDPALVQCTYA---LKLMNYLGYRPRLVECAECGQRVQGERLLF-SPDAGGVVCR 176 Query: 174 SV 175 Sbjct: 177 QC 178 >gi|21220971|ref|NP_626750.1| DNA repair protein RecO [Streptomyces coelicolor A3(2)] gi|6752353|emb|CAB69731.1| conserved hypothetical protein SCC121.13c [Streptomyces coelicolor A3(2)] Length = 251 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 7 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 66 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 + ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 67 KGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 126 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S SGG+ Sbjct: 127 LVGALRTLARGEHAPTLVL--DAFLLRSLAVNGYAPTFGDCAKCGMPGPNRFFSVGSGGS 184 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 VC +P + + +L + L + T DA ++ L +L+ + Sbjct: 185 VCVDCRVPGSVVPSPQALELLGALLTGDWGTADAAEPRYVREGSGLVSAYLHWHL 239 >gi|119370513|sp|Q9L2H3|RECO_STRCO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 248 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 + ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 KGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S SGG+ Sbjct: 124 LVGALRTLARGEHAPTLVL--DAFLLRSLAVNGYAPTFGDCAKCGMPGPNRFFSVGSGGS 181 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 VC +P + + +L + L + T DA ++ L +L+ + Sbjct: 182 VCVDCRVPGSVVPSPQALELLGALLTGDWGTADAAEPRYVREGSGLVSAYLHWHL 236 >gi|83644634|ref|YP_433069.1| DNA repair protein RecO [Hahella chejuensis KCTC 2396] gi|123534040|sp|Q2SL30|RECO_HAHCH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83632677|gb|ABC28644.1| DNA repair protein RecO [Hahella chejuensis KCTC 2396] Length = 238 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 7/160 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP-ILQAGNLVRVNWRSRLAQN 65 A +L R Y E + I++++T G+ ++ G + P LQ + V R + Sbjct: 9 AYVLHSRPYRESSYIVDLITEADGKASAVLKGGGRRKGVPGTLQPFTELEVELGGR-GEL 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 R+E L+ + GL L + L E C +++D L +P Sbjct: 68 KSLIRYETTNIRYP--LAGAALYAGLYLNELLVKLLQPLEGCRKVFDAYKSSLTFLSLPQ 125 Query: 126 VIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 + ++ +E LL +GFG+D TG V ++ + Sbjct: 126 PNLEPGIRELEFALLNELGFGVDFCVESATGDIVKNNIAY 165 >gi|332205069|gb|EGJ19132.1| DNA repair protein RecO [Streptococcus pneumoniae GA47368] Length = 256 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLIKIFTEQVGKRMFFVKHAAQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDK 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|284044557|ref|YP_003394897.1| DNA repair protein RecO [Conexibacter woesei DSM 14684] gi|283948778|gb|ADB51522.1| DNA repair protein RecO [Conexibacter woesei DSM 14684] Length = 248 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 16/182 (8%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L +GE + IL + T +GR + + R + G + + R+ Sbjct: 7 RTEAIVLRSIRFGEADRILHLYTPDHGRVGAIAKGARKTRSRF----GARLEPFFHLRVN 62 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFL--------YGLQSIVPLFRFLPEREPCLELYDMLN 115 +L R ++ A + L ++ + R +P ++ +L Sbjct: 63 LHLS--RGDLHTVTSADTIDPHGPLRERACSLDAASRACDAVTRLFETDDPSPAVFHLLA 120 Query: 116 IFLNCHKIPS--VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + L LL GF L C G + L S +GG VC Sbjct: 121 NELRLLDGDERHSGQAAQLAFRLKLLVAGGFTPQLASCASCGESDHLSGFSGSAGGVVCS 180 Query: 174 SV 175 + Sbjct: 181 AC 182 >gi|89895849|ref|YP_519336.1| hypothetical protein DSY3103 [Desulfitobacterium hafniense Y51] gi|119361456|sp|Q24SV0|RECO_DESHY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|89335297|dbj|BAE84892.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 273 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 16/182 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + DA+++ R YGE + +L + +R+YG+ + + + + +AG + L Sbjct: 4 YHADALVIRSREYGESDRLLTLFSREYGKIQAVAKGVRKPKSRQ--RAGAQLFTYAEYLL 61 Query: 63 AQNLGEFRFEVLESH--CAKLLSSSLFLYGLQSIVPL--FRFLPEREPCLELYDML--NI 116 + + L + ++ L LP +P EL+ + ++ Sbjct: 62 HKGKSLDTVNQVSPRESFPHLWTDLDMSMAATAMAELLDLATLP-GQPHPELFTLTFSSL 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCR 173 FL P+++ + L L+ +G+ L +C G + LL+ SP +GG VCR Sbjct: 121 FLVESCDPALVQCTYA---LKLMNYLGYRPRLVECAECGQRVQGERLLF-SPDAGGVVCR 176 Query: 174 SV 175 Sbjct: 177 QC 178 >gi|170718281|ref|YP_001785298.1| DNA repair protein RecO [Haemophilus somnus 2336] gi|168826410|gb|ACA31781.1| DNA repair protein RecO [Haemophilus somnus 2336] Length = 217 Score = 75.9 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 12/141 (8%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 ++E+ T ++GR + ++ R + +LQ + +NW R GE + ++++ Sbjct: 2 LVELFTEEHGRLTVLAKGARAKRSAWKSLLQPFTPLLLNWSGR-----GELKI-LIKAEA 55 Query: 79 AKL---LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK-IPSVIGKIFVQI 134 L L ++ G + R L +L+ L P I K Sbjct: 56 ISLTLPLQTTALYSGFYVNELIARLLAPETAYPDLFQYYLQCLTALASSPQEIEKSLRTF 115 Query: 135 ELMLLKNIGFGLDLTKCVVTG 155 E LL+ +G+ +D C +G Sbjct: 116 EFQLLEVLGYAVDFCHCAGSG 136 >gi|74318102|ref|YP_315842.1| DNA repair protein RecO [Thiobacillus denitrificans ATCC 25259] gi|90103526|sp|Q3SH52|RECO_THIDA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|74057597|gb|AAZ98037.1| Recombination protein O, RecO [Thiobacillus denitrificans ATCC 25259] Length = 256 Score = 75.9 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 30/194 (15%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 + IL + E +++ EV TR +GR R + + ++ ++Q + + ++W + Sbjct: 17 NESGFILHTYPFKETSVVAEVFTRAHGRVALIARGARRPASALRGLMQPFSPLLLSWFGK 76 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLN 115 ++ H A+ + G + R L + LYD Sbjct: 77 ---------ADLKTLHAAEWQGGLVAPQGRALMCGFYLNELLLRLLARGDAHERLYDRYV 127 Query: 116 IFLNCHKIPSVI---------GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-S 164 L+ + +I + E LL IG+G + +V Sbjct: 128 ETLDQLARSAAASDAERATAFERILRRFEKNLLSEIGYGATFDVEAGGAAIEPGAAYVFQ 187 Query: 165 PKSGGAVCRSVGLP 178 P+ G R+ G P Sbjct: 188 PERGAL--RAAGQP 199 >gi|292492474|ref|YP_003527913.1| DNA repair protein RecO [Nitrosococcus halophilus Nc4] gi|291581069|gb|ADE15526.1| DNA repair protein RecO [Nitrosococcus halophilus Nc4] Length = 249 Score = 75.9 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 21/161 (13%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRSRLA 63 A +L +R Y E + ++E+ T+ YGR + + R + I LQ + ++W R Sbjct: 7 PAYVLHLRPYRETSALVEIFTQDYGRVGLVAKGVRQRRSKAIGLLQPFCPLLLSWVGRSD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--------REPCLELYDMLN 115 ++ A+ L G + + L E R+P L+ + Sbjct: 67 ---------LVTLTGAEAAGRGPALTGEGLVCAFY--LNELLLRLLPRRDPFEALFSVYA 115 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + E LL +G+GL LT T Sbjct: 116 HSLPPLANSQQRQQALRLFERDLLTYLGYGLTLTHEADTHR 156 >gi|254392569|ref|ZP_05007746.1| DNA repair protein recO [Streptomyces clavuligerus ATCC 27064] gi|294812537|ref|ZP_06771180.1| DNA repair protein recO [Streptomyces clavuligerus ATCC 27064] gi|326441010|ref|ZP_08215744.1| DNA repair protein RecO [Streptomyces clavuligerus ATCC 27064] gi|197706233|gb|EDY52045.1| DNA repair protein recO [Streptomyces clavuligerus ATCC 27064] gi|294325136|gb|EFG06779.1| DNA repair protein recO [Streptomyces clavuligerus ATCC 27064] Length = 248 Score = 75.9 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 78/188 (41%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSRFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRALSRGEHAPHLVL--DAFLLRSLAVNGYAPSFDACARCGLPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLP 178 +C +P Sbjct: 182 ICGDCRVP 189 >gi|329120278|ref|ZP_08248946.1| recombination protein O [Neisseria bacilliformis ATCC BAA-1200] gi|327462619|gb|EGF08942.1| recombination protein O [Neisseria bacilliformis ATCC BAA-1200] Length = 256 Score = 75.9 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 17/155 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + A +L + E ++ LE+ +R+YGR R+ + + ++ +L V V+W Sbjct: 10 HEPAFLLAAAPWRESSLRLEMYSRRYGRVSLLARSARKRQSELRGVLVPFVPVSVSW--- 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E H A+ L L GL + + P + +YD L Sbjct: 67 ------YGGAETKTLHRAEWLGGWPQPQGRALLSGLYLNELVLKLTPREDAQPAVYDALA 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L + + E LL +G+ DL Sbjct: 121 QALKSVCTETAHAAALRRFEWRLLTELGYAPDLQS 155 >gi|224825226|ref|ZP_03698332.1| DNA repair protein RecO [Lutiella nitroferrum 2002] gi|224602897|gb|EEG09074.1| DNA repair protein RecO [Lutiella nitroferrum 2002] Length = 242 Score = 75.9 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 83/223 (37%), Gaps = 24/223 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + A +L + Y E +++L+V+TR++GR R + R ++ +L + + W + Sbjct: 8 RQPAYVLHAQPYRETSLLLDVLTREHGRIALVARGARRPRSDLRGVLLPFQPLLLAWFGK 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLN 115 EV H A L GL + L + +P E + + Sbjct: 68 S---------EVRTLHTADWQGGVPQLSGLPLVCGFYLNELLIKLTARDDPHPETFGVYA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSGGAVCR 173 + ++ + + EL L++ +G+ + D+ ++ P+ A+ R Sbjct: 119 EAVRGLASGGLLSSVLRRFELGLVRTLGYAPAFDVDSNGREVEPDVPYLCGPE--QALQR 176 Query: 174 SVGLPYAEKMLVLPSFLWKEEQTIDADSL---KSAFQLTDYFL 213 G P + V+ + D L + A +L FL Sbjct: 177 WQGGPVPAQQQVIEGRILLAMAGGDFSELATRREARRLMRLFL 219 >gi|325136835|gb|EGC59433.1| DNA repair protein RecO [Neisseria meningitidis M0579] Length = 248 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V V+W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 180 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 227 >gi|307707933|ref|ZP_07644408.1| DNA repair protein RecO [Streptococcus mitis NCTC 12261] gi|307615998|gb|EFN95196.1| DNA repair protein RecO [Streptococcus mitis NCTC 12261] Length = 256 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 76/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +C S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECAFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|156975790|ref|YP_001446697.1| recombinational DNA repair protein [Vibrio harveyi ATCC BAA-1116] gi|156527384|gb|ABU72470.1| hypothetical protein VIBHAR_03534 [Vibrio harveyi ATCC BAA-1116] Length = 219 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 17/144 (11%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 IL+V + +YGR + +S R ++ LQ + + W + G + Sbjct: 2 ILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGK-----GSMK----TLRQ 52 Query: 79 AKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFV 132 A+ +S L L+G+ ++ R L P L+ L Sbjct: 53 AEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQSDNPEPGLR 112 Query: 133 QIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G+D C TG Sbjct: 113 RFELALLSSMGYGVDFLHCAGTGE 136 >gi|297626096|ref|YP_003687859.1| DNA repair protein recO (Recombination protein O) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921861|emb|CBL56421.1| DNA repair protein recO (Recombination protein O) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 247 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 10/185 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + I+ +++R +G+ R + S + L+ N V V + Sbjct: 4 YRDEAVVLRTHKLGEADRIITLLSRTHGKVRAVARGVRRTSSKFGGRLEPCNHVDVQFAV 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFLP-EREPCLELYDMLNIFL 118 + ++ + E L + L L+ G + R + E EP L+ Y +L L Sbjct: 64 GRSLDIVT-QVECLHPYGDPLTRDYVLYTTGETMLEVADRLVAVENEPSLQQYRLLVGAL 122 Query: 119 NCHKI-----PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 P + L L G+ L C GV W SP GG VC Sbjct: 123 RVLGQGTSDGPRPATMVLDSYLLRSLAVAGYAPVLDSCAKCGVMGQQEWFSPSIGGMVCS 182 Query: 174 SVGLP 178 P Sbjct: 183 GCRPP 187 >gi|320010909|gb|ADW05759.1| DNA repair protein RecO [Streptomyces flavogriseus ATCC 33331] Length = 248 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 97/235 (41%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + ++S G + RF E EP ++ Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGGGIVSDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRTLARAEHAPNLIL--DAFLLRSLAVNGYAPSFVDCAKCGMPGPNRFFSVAAGGV 181 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 +C +P AE + +L + L + +T DA ++ L +L+ + Sbjct: 182 ICGDCRVPGSVVPSAEAVELLSALLTGDWETADASEARHVREGSGLVSAYLHWHL 236 >gi|239979354|ref|ZP_04701878.1| DNA repair protein RecO [Streptomyces albus J1074] gi|291451229|ref|ZP_06590619.1| DNA repair protein RecO [Streptomyces albus J1074] gi|291354178|gb|EFE81080.1| DNA repair protein RecO [Streptomyces albus J1074] Length = 248 Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ +TR+YGR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITFLTRRYGRVRAVARGVRRTKSKFGARLEPFSHVDVQYFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + ++ + +++ G + RF E +P ++ Y + Sbjct: 64 RGSELIGRGLPLCTQTETIAAYGSGIVTDYDRYTAGTAMLETAERFTDHEGQPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L ++ + + LL+++ G+ L C G+ + S +GG+ Sbjct: 124 LVGGLRTLARGEHAPRLVL--DAFLLRSLAVNGYAPSLGDCARCGMPGPNRFFSVAAGGS 181 Query: 171 VCRSVGLP 178 VC +P Sbjct: 182 VCGECRVP 189 >gi|56478592|ref|YP_160181.1| DNA repair protein RecO [Aromatoleum aromaticum EbN1] gi|62287380|sp|Q5P084|RECO_AZOSE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56314635|emb|CAI09280.1| DNA repair protein recO (Recombination protein O) [Aromatoleum aromaticum EbN1] Length = 239 Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 8/151 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 Q A +L + E ++++E+ +R +GR + + ++ ++ A + ++W Sbjct: 9 QQPAFVLHTYPWRETSLVVEIFSRDHGRVALVAKGARRPMSALRGVIMAFQPLLMDWSGG 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + R E LL+ + G L R + L++ L+ Sbjct: 69 -GEVKTLVRAEWRGGQ--PLLTGRALMCGYYLNELLVRLTAREDAHPALFEAYADALSQL 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGF--GLDLTK 150 V I + EL LL+ +G+ GLDL Sbjct: 126 GRGDVAP-ILRRFELTLLRELGYGIGLDLEG 155 >gi|33593413|ref|NP_881057.1| hypothetical protein BP2429 [Bordetella pertussis Tohama I] gi|33572769|emb|CAE42701.1| hypothetical protein BP2429 [Bordetella pertussis Tohama I] gi|332382822|gb|AEE67669.1| hypothetical protein BPTD_2387 [Bordetella pertussis CS] Length = 195 Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 6/144 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L ++ E ++I++ +R+YG + + ++P+L A + ++W Sbjct: 12 PGYMLHATAWRETSLIVQAFSREYGCIALVAKGAKRPYSVLRPVLSAFQPLLLSWSG-AG 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + R E+ L + L R LP + LYD + L Sbjct: 71 EVKTMTRAEIAGVRP---LGGPALMSAWYMNELLLRLLPCEDAHPVLYDAYDTALTQLSA 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD 147 S + E +LL+ G+GLD Sbjct: 128 GSRAAGALRRFEWILLRETGYGLD 151 >gi|323350852|ref|ZP_08086510.1| recombination protein O [Streptococcus sanguinis VMC66] gi|322122834|gb|EFX94540.1| recombination protein O [Streptococcus sanguinis VMC66] gi|327488721|gb|EGF20521.1| recombination protein O [Streptococcus sanguinis SK1058] Length = 257 Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCYLNPNLPFLLDQFQAVRFSELE 207 >gi|254805524|ref|YP_003083745.1| DNA repair protein RecO [Neisseria meningitidis alpha14] gi|254669066|emb|CBA07573.1| DNA repair protein RecO [Neisseria meningitidis alpha14] Length = 248 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 82/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWIGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 180 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 227 >gi|253999487|ref|YP_003051550.1| DNA repair protein RecO [Methylovorus sp. SIP3-4] gi|253986166|gb|ACT51023.1| DNA repair protein RecO [Methylovorus sp. SIP3-4] Length = 241 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 17/149 (11%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +R +GR + + M+ +LQ+ + W + Sbjct: 13 YVLHTYPFKETSLVVELFSRDFGRVAAVAKGARRPRSAMRGMLQSFQPLLATWSGK---- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR------FLPEREPCLELYDMLNIFLN 119 E+ H + S L L G + + LP + L+ L Sbjct: 69 -----AELKTLHSLEWGSGLLLLQGDALMCGFYMNELLLRLLPREDSHDALFAYYGDTLR 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + EL +L+ +G+ + L Sbjct: 124 TLSQSAEHATSLRRFELRMLQEMGYAVPL 152 >gi|322388507|ref|ZP_08062109.1| recombination protein O [Streptococcus infantis ATCC 700779] gi|321140625|gb|EFX36128.1| recombination protein O [Streptococcus infantis ATCC 700779] Length = 256 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 78/204 (38%), Gaps = 6/204 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV ++ ++ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLAHFLLKVN 63 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L + +++ + Y L + + L+ L L Sbjct: 64 DDGLSYIEDYHEVKTFPKINSDLFVMAYATYVAALADASLQDNQEDAPLFTFLQKTLELM 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + E+ +L G L+ +C S K GG +C + Sbjct: 124 EEGLDYQVLTNIFEIQILTRFGISLNFNECTFCHRVGQAFDFSFKYGGCLCPDHYHEDEK 183 Query: 182 KMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 184 RCHLNPNIPYLLNQFQAIDFETLE 207 >gi|322391156|ref|ZP_08064628.1| recombination protein O [Streptococcus peroris ATCC 700780] gi|321145909|gb|EFX41298.1| recombination protein O [Streptococcus peroris ATCC 700780] Length = 256 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + ++ Sbjct: 6 TSRGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQTKLAPVIQP--LVLARFLMKVN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + L+ L L Sbjct: 64 DDGLSYIE-DYREVMTFPKINSDLFVMAYATYVAALADASLQDNHEDAPLFAFLQKVLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ LL G L+ +C S K GG +C Sbjct: 123 MEEGLDYQVLTNIFEIQLLTRFGISLNFNECTFCHRVGQAFDFSFKYGGCLCPDHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 ++ + P +L + Q ID ++L+ Sbjct: 183 KRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|158320288|ref|YP_001512795.1| DNA repair protein RecO [Alkaliphilus oremlandii OhILAs] gi|172048003|sp|A8MG71|RECO_ALKOO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|158140487|gb|ABW18799.1| DNA repair protein RecO [Alkaliphilus oremlandii OhILAs] Length = 246 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 11/182 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + IL R +GE + IL + TR+ G+ + + + +Q Sbjct: 1 MLITTEGFILKNRKFGETDSILTIFTRKAGKITAIAKGARRPKSNLLAGIQPFCYSEFV- 59 Query: 59 RSRLAQNLGEFRFE--VLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLN 115 L + + + L L Y + + E + L+++ Sbjct: 60 ---LYKGKNMYTVSQCEAKEIFYPLREDLKRLSYASYLVELVEAVTTEGQTNHRLFNLFG 116 Query: 116 IFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLW-VSPKSGGAVCR 173 L K + V+ E+ L+ +G+ L CV + W S GG +C Sbjct: 117 KTLFLLKKSDIEINPIVRAFEIKLMNYLGYKPQLMSCVNCDSKETTAWKFSATEGGLLCS 176 Query: 174 SV 175 S Sbjct: 177 SC 178 >gi|92113757|ref|YP_573685.1| DNA repair protein RecO [Chromohalobacter salexigens DSM 3043] gi|91796847|gb|ABE58986.1| DNA repair protein RecO [Chromohalobacter salexigens DSM 3043] Length = 234 Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 7/141 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L R+Y E + I+E++T GR + Q + + ILQ + + V W Sbjct: 4 EPAFLLHKRAYRETSAIVELLTLGQGRVRAVAQGVQRGGSKARGILQPFSPLHVTWSGNG 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 R +LES + L + L G+ + L R LP P E++ + + L Sbjct: 64 D----LKRLRLLESQGSAALLAGEGLLCGVYANELLARTLPLEYPAGEVFSLYALTLEAL 119 Query: 122 KIPSVIGKIFVQIELMLLKNI 142 P+ ++E+ LL+ + Sbjct: 120 PSPAKRAGALRRLEITLLETL 140 >gi|229031946|ref|ZP_04187933.1| DNA repair protein recO [Bacillus cereus AH1271] gi|229174972|ref|ZP_04302492.1| DNA repair protein recO [Bacillus cereus MM3] gi|228608640|gb|EEK65942.1| DNA repair protein recO [Bacillus cereus MM3] gi|228729410|gb|EEL80400.1| DNA repair protein recO [Bacillus cereus AH1271] Length = 252 Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 80/222 (36%), Gaps = 25/222 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVR 55 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q GN + Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGNFLI 64 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++ LG + + S ++ L Y + + +++ L++ML Sbjct: 65 -----QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEML 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ + + + +L +G C + D + S + GG +C Sbjct: 120 YQTLHYMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSR 179 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF-LNK 215 + + +++ +L +F L++ Sbjct: 180 HAEQ-------------DQYRIPVGEAVHKLLRLFYHFDLHR 208 >gi|315612133|ref|ZP_07887049.1| recombination protein O [Streptococcus sanguinis ATCC 49296] gi|315315796|gb|EFU63832.1| recombination protein O [Streptococcus sanguinis ATCC 49296] Length = 256 Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 78/205 (38%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPDHFHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 ++ + P +L + Q ID ++L+ Sbjct: 183 KRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|239931393|ref|ZP_04688346.1| DNA repair protein RecO [Streptomyces ghanaensis ATCC 14672] gi|291439766|ref|ZP_06579156.1| DNA repair protein RecO [Streptomyces ghanaensis ATCC 14672] gi|291342661|gb|EFE69617.1| DNA repair protein RecO [Streptomyces ghanaensis ATCC 14672] Length = 248 Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 97/235 (41%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 + ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 KGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S SGG+ Sbjct: 124 LVGALRTLARGEHAPHLVL--DAFLLRSLAVNGYAPSFGDCAKCGMPGPNRFFSVASGGS 181 Query: 171 VCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYA 217 +C +P + + +L + L + +T DA ++ L +L+ + Sbjct: 182 LCVDCRVPGSVVPSPQALELLGALLTGDWETADACEARYVREGSGLVSAYLHWHL 236 >gi|313201512|ref|YP_004040170.1| DNA repair protein reco [Methylovorus sp. MP688] gi|312440828|gb|ADQ84934.1| DNA repair protein RecO [Methylovorus sp. MP688] Length = 230 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 17/149 (11%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +R +GR + + M+ +LQ+ + W + Sbjct: 2 YVLHTYPFKETSLVVELFSRDFGRVAAVAKGARRPRSAMRGMLQSFQPLLATWSGK---- 57 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR------FLPEREPCLELYDMLNIFLN 119 E+ H + S L L G + + LP + L+ L Sbjct: 58 -----AELKTLHSLEWGSGLLLLQGDALMCGFYMNELLLRLLPREDSHDALFAYYGDTLR 112 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + EL +L+ +G+ + L Sbjct: 113 TLSQSAEHATSLRRFELRMLQEMGYAVPL 141 >gi|108760610|ref|YP_631289.1| DNA repair protein RecO [Myxococcus xanthus DK 1622] gi|119361467|sp|Q1D7T4|RECO_MYXXD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|108464490|gb|ABF89675.1| DNA repair protein RecO [Myxococcus xanthus DK 1622] Length = 244 Score = 74.8 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 15/184 (8%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR 59 + DDA++L YGE + ++ ++TR++G+ F + R L+ +RV+ Sbjct: 3 RYDDDALVLSSVDYGESDRLVTLLTREHGKLTAFAAGARKSKRRFAGALEPFMRLRVHI- 61 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + R + + + + LY ++ L R + EP EL+ + Sbjct: 62 --VETRGSTVRLDGTDIVAGFYAAREDLSLIARALYAVELCRELTR---DHEPQPELFAL 116 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVC 172 L +L + EL L + G C + G + GGAVC Sbjct: 117 LESYLTRLDAKEAGPTSLLAFELSALAHAGLMPRFDSCSLCGGAPGERPRFDQAHGGAVC 176 Query: 173 RSVG 176 G Sbjct: 177 EPCG 180 >gi|239941031|ref|ZP_04692968.1| DNA repair protein RecO [Streptomyces roseosporus NRRL 15998] gi|239987510|ref|ZP_04708174.1| DNA repair protein RecO [Streptomyces roseosporus NRRL 11379] gi|291444471|ref|ZP_06583861.1| DNA repair protein recO [Streptomyces roseosporus NRRL 15998] gi|291347418|gb|EFE74322.1| DNA repair protein recO [Streptomyces roseosporus NRRL 15998] Length = 248 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 78/188 (41%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVADYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRTLARGEHAPHLIL--DAFLLRSLAVNGYAPSFEDCAKCGMPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLP 178 +C +P Sbjct: 182 ICGDCRVP 189 >gi|71907659|ref|YP_285246.1| DNA repair protein RecO [Dechloromonas aromatica RCB] gi|92087026|sp|Q47EF5|RECO_DECAR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71847280|gb|AAZ46776.1| DNA replication and repair protein RecO [Dechloromonas aromatica RCB] Length = 242 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 20/155 (12%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L + E ++I+EV +R +GR R + ++ +L A + + W + Sbjct: 11 PAYVLHSYPFRETSLIVEVFSRDFGRMALLARGARRPRSAIRGLLMAFQPLEIAWAGK-- 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLEL---YDML 114 EVL A+ L G L LP + +L Y + Sbjct: 69 -------GEVLTLMKAEWQGGLPLLAGEALFCGYYLNELLMHLLPREDAHEQLFASYAKM 121 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 L V E LL+ +G+GL L Sbjct: 122 LALLAADPSGKVREADLRCFEKALLQELGYGLTLN 156 >gi|324990084|gb|EGC22025.1| recombination protein O [Streptococcus sanguinis SK353] Length = 257 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 73/207 (35%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF--RFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S V L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVSALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCYLNPNLPFLLDQFQAVRFSELE 207 >gi|293364584|ref|ZP_06611305.1| recombination protein O [Streptococcus oralis ATCC 35037] gi|307702836|ref|ZP_07639784.1| DNA repair protein RecO [Streptococcus oralis ATCC 35037] gi|291316842|gb|EFE57274.1| recombination protein O [Streptococcus oralis ATCC 35037] gi|307623516|gb|EFO02505.1| DNA repair protein RecO [Streptococcus oralis ATCC 35037] Length = 256 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 78/205 (38%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGIDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPDHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 ++ + P +L + Q ID ++L+ Sbjct: 183 KRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|218768788|ref|YP_002343300.1| DNA repair protein (recombination protein o) [Neisseria meningitidis Z2491] gi|121052796|emb|CAM09142.1| DNA repair protein (recombination protein o) [Neisseria meningitidis Z2491] Length = 264 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 83/229 (36%), Gaps = 24/229 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L LV +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVLVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGG-AVC 172 + + + E LL +G DL + G V P++ V Sbjct: 120 EVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVG 179 Query: 173 RSVGLPYAEKMLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + +P +V P +E A+SL+ A ++T F+ ++ L Sbjct: 180 KGFAVPPHAAGVVAPGQSLIDLREGSFRTAESLQQALKITRLFI-RHLL 227 >gi|229098769|ref|ZP_04229707.1| DNA repair protein recO [Bacillus cereus Rock3-29] gi|229104929|ref|ZP_04235586.1| DNA repair protein recO [Bacillus cereus Rock3-28] gi|229117794|ref|ZP_04247159.1| DNA repair protein recO [Bacillus cereus Rock1-3] gi|228665657|gb|EEL21134.1| DNA repair protein recO [Bacillus cereus Rock1-3] gi|228678503|gb|EEL32723.1| DNA repair protein recO [Bacillus cereus Rock3-28] gi|228684613|gb|EEL38553.1| DNA repair protein recO [Bacillus cereus Rock3-29] Length = 252 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 34/208 (16%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------------PIL 48 M+ + + I++ YGE N I+ + +R++G+ R + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 49 QAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPC 107 Q G LG + + S ++ L Y + + +++ Sbjct: 65 QVG------------SGLGTLQQGEIISTMKEIREDIFLTAYASFVVELTDKATEDKKHN 112 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 L++ML L+ + + + +L +G C + D + S + Sbjct: 113 PYLFEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVRE 172 Query: 168 GGAVCRSVGL--PYA-------EKMLVL 186 GG +C PY K+L L Sbjct: 173 GGFLCSRHAEQDPYRIPVGEAVHKLLRL 200 >gi|117618822|ref|YP_855345.1| DNA repair protein RecO [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560229|gb|ABK37177.1| DNA repair protein RecO [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 235 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 88/240 (36%), Gaps = 15/240 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A ++ R Y E + ++EV T+ GR R + R ++ +LQ L+ + WR + Sbjct: 4 PAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPLKGLLQPFTLLTIAWRGKGD 63 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L H +L LF YGL ++ L P E++D + Sbjct: 64 --LKNLTQVECPDHSLRLGGDRLF-YGLYLNELVYYLLEAHTPFPEVFDAYARTIMALAD 120 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCV--VTGVTQDLLW-VSPKSGGAVCRSVGLPYA 180 + E +LL+ +G+ +D + + +LL+ + G C P Sbjct: 121 GETPELPLRRFEFLLLQALGYAVDFEYAADDESPIQPELLYGFERELGFVACERA--PDP 178 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGKLLEL 239 + + L E D+ L A + ++ ALQ RE FL + L Sbjct: 179 RTLFLGAHLLAFAEGHFDSPPLLQAAKR----FSRLALQPYLGRRQLKSRELFLKRRNSL 234 >gi|332364885|gb|EGJ42653.1| recombination protein O [Streptococcus sanguinis SK355] Length = 257 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVAYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|17865561|sp|Q9JT15|RECO_NEIMA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|6274541|gb|AAF06689.1|AF163663_14 putative DNA repair protein homolog RecO [Neisseria meningitidis] Length = 263 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 83/229 (36%), Gaps = 24/229 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L LV +W Sbjct: 8 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVLVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGG-AVC 172 + + + E LL +G DL + G V P++ V Sbjct: 119 EVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVG 178 Query: 173 RSVGLPYAEKMLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + +P +V P +E A+SL+ A ++T F+ ++ L Sbjct: 179 KGFAVPPHAAGVVAPGQSLIDLREGSFRTAESLQQALKITRLFI-RHLL 226 >gi|325142930|gb|EGC65289.1| DNA repair protein RecO [Neisseria meningitidis 961-5945] Length = 263 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 82/229 (35%), Gaps = 24/229 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 8 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGG-AVC 172 + + + E LL +G DL + G V P++ V Sbjct: 119 EVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVG 178 Query: 173 RSVGLPYAEKMLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + +P +V P +E A+SL+ A ++T F+ ++ L Sbjct: 179 KGFAVPPHAAGVVAPGQSLIDLREGSFRTAESLQQALKITRLFI-RHLL 226 >gi|320354704|ref|YP_004196043.1| DNA repair protein RecO [Desulfobulbus propionicus DSM 2032] gi|320123206|gb|ADW18752.1| DNA repair protein RecO [Desulfobulbus propionicus DSM 2032] Length = 256 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRS-RLA 63 +L + +GE + ++ + +R GR G + + + + + L+ + ++V +R R+ Sbjct: 9 GFVLKIAEHGESDKLVTLYSRDVGRMTGIAKGARKSKQRFVNKLELFSSLKVLYRPPRVH 68 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L E+L + L + + RF E +P LY++L L+ Sbjct: 69 GGLHVLDDAELLNARLPLRLEYRRYAVAIHLSELFLRFTRENDPDAHLYELLRWTLDLLS 128 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT------GVTQDLLWVSPKSGGAVCRSVG 176 + KI V L LL G+ +L +C G T L+ S G +C + Sbjct: 129 VDKAPLKIMVFSYLHLLAASGYRPELDRCGSCRHPITPGRTYTLIAAS---GSLLCDACQ 185 Query: 177 LPYAE 181 P Sbjct: 186 PPQRH 190 >gi|168483659|ref|ZP_02708611.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1873-00] gi|172043032|gb|EDT51078.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1873-00] Length = 256 Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLIKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDK 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|15613932|ref|NP_242235.1| DNA repair protein RecO [Bacillus halodurans C-125] gi|20139774|sp|Q9KD50|RECO_BACHD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|10173985|dbj|BAB05088.1| BH1369 [Bacillus halodurans C-125] Length = 254 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 7/179 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ V TR+YG+ R + R+ + Q + + Sbjct: 1 MFHKAEGIVIRTVDYGESNKIVTVFTREYGKIALMARGAKRPKSRLTAVTQLFTYGMMMF 60 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-CLELYDMLNI 116 + LG E+++S ++ + + + L L E E L+++L Sbjct: 61 QK--NAGLGTLTQGEIIQS-FREVRNDLFRASYVSYVTDLTNKLTEDEKRNPYLFELLYQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 ++ + E+ + G +L +CV T + S K G +C+ Sbjct: 118 TIHYMNEGMDPDVLTRIFEVKMFTVAGIKPELDQCVSCRSTDVPVGFSIKEAGFLCKRC 176 >gi|182438807|ref|YP_001826526.1| DNA repair protein RecO [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779462|ref|ZP_08238727.1| DNA repair protein recO [Streptomyces cf. griseus XylebKG-1] gi|238689003|sp|B1VY58|RECO_STRGG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|178467323|dbj|BAG21843.1| putative DNA recombination and repair protein RecO [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659795|gb|EGE44641.1| DNA repair protein recO [Streptomyces cf. griseus XylebKG-1] Length = 248 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 77/188 (40%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R + +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 RGGELVGRGLPLCTQSETIAPYGGGIVADYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRTLARGEHAPHLIL--DAFLLRSLAVNGYAPSFEDCAKCGMPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLP 178 +C +P Sbjct: 182 ICGDCRVP 189 >gi|121635410|ref|YP_975655.1| DNA repair protein (recombination protein o) [Neisseria meningitidis FAM18] gi|120867116|emb|CAM10883.1| DNA repair protein (recombination protein o) [Neisseria meningitidis FAM18] gi|254671054|emb|CBA07920.1| DNA repair protein RecO [Neisseria meningitidis alpha153] gi|319411027|emb|CBY91426.1| DNA repair protein RecO (recombination protein O) [Neisseria meningitidis WUE 2594] gi|325132871|gb|EGC55549.1| DNA repair protein RecO [Neisseria meningitidis M6190] gi|325138816|gb|EGC61367.1| DNA repair protein RecO [Neisseria meningitidis ES14902] Length = 264 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 82/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 EVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 180 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 227 >gi|261365754|ref|ZP_05978637.1| DNA repair protein RecO [Neisseria mucosa ATCC 25996] gi|288565714|gb|EFC87274.1| DNA repair protein RecO [Neisseria mucosa ATCC 25996] Length = 246 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +EV +R+YGR R+ + + ++ +L V +W Sbjct: 8 HEPIFLLASAPWRESSLWVEVFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYINELMLKLTAREDPIPELYDALE 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + + E LL +GF DL Sbjct: 119 AVMRAVCGENSHTAALRRFEWALLTRLGFAPDL 151 >gi|303254138|ref|ZP_07340252.1| DNA repair protein RecO [Streptococcus pneumoniae BS455] gi|302598892|gb|EFL65924.1| DNA repair protein RecO [Streptococcus pneumoniae BS455] Length = 256 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQILTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHCHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|330828484|ref|YP_004391436.1| DNA repair protein RecO [Aeromonas veronii B565] gi|328803620|gb|AEB48819.1| DNA repair protein RecO [Aeromonas veronii B565] Length = 236 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 5/146 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A ++ R Y E + ++EV T+ GR R + R ++ +LQ L+ + WR + Sbjct: 4 PAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPLKGLLQPFTLLTIAWRGKGD 63 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L H +L LF YGL ++ L P E++D + Sbjct: 64 --LKNLTQVECPDHSLRLGGDRLF-YGLYLNELVYYLLEAHTPFPEVFDAYARAIMALAD 120 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLT 149 + E +LL+ +G+ +D Sbjct: 121 GETPELPLRRFEFLLLQALGYAVDFE 146 >gi|238897757|ref|YP_002923436.1| gap repair protein, part of RecFOR complex [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259563680|sp|C4K3Z5|RECO_HAMD5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229465514|gb|ACQ67288.1| gap repair protein, part of RecFOR complex [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 234 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 8/153 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQN 65 IL RSY E ++IL+++T GR + ++ LQ + + W + A Sbjct: 9 FILHRRSYSETSLILDLLTENEGRISLIAKGALRPRSALKGYLQPFTPLLLRWSGKSAI- 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 E + S L + +FLY GL L R L L+ L Sbjct: 68 KTLCGAEPI-SIAVPL--TGIFLYSGLYVNELLSRLLLPNIDYRALFFDYLDCLEALASA 124 Query: 125 -SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + EL LL ++G+G+D CV TG Sbjct: 125 QDTSERALRRFELALLTHLGYGVDFLHCVETGE 157 >gi|171704547|sp|A1KVH9|RECO_NEIMF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|6449094|gb|AAF08823.1|AF194079_10 recO [Neisseria meningitidis] Length = 263 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 82/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 8 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 119 EVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 179 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 226 >gi|307704643|ref|ZP_07641544.1| DNA repair protein RecO [Streptococcus mitis SK597] gi|307621796|gb|EFO00832.1| DNA repair protein RecO [Streptococcus mitis SK597] Length = 256 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFRENDKLVKIFTEQAGKRMFFVKHTGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRIGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|296136814|ref|YP_003644056.1| DNA repair protein RecO [Thiomonas intermedia K12] gi|294340983|emb|CAZ89378.1| putative DNA repair protein recO (Recombination protein O) [Thiomonas sp. 3As] gi|295796936|gb|ADG31726.1| DNA repair protein RecO [Thiomonas intermedia K12] Length = 266 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 72/221 (32%), Gaps = 31/221 (14%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 ++ +L + E +++L+V +R++GR + + + ++ +L +W R Sbjct: 30 EEPIYVLHSYPWKETSLLLDVFSRRHGRLALVAKGAKRPTSALRAVLLGFQPCHASWSGR 89 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLN 115 EV A+ L GL + L R L + L+D + Sbjct: 90 ---------GEVRTLTRAEWAGGLAPLSGLPLLCGFYFNELLVRLLAREDAHEGLFDAYH 140 Query: 116 IFLNCHKIPSVIGK-----IFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLW-VSPKS 167 + + E LL+ +GF DL T V D + V P Sbjct: 141 AGIAALAQRPHATAGELEPVLRSFEFSLLRELGFLPDLHLEGATSEPVLPDAFYRVDPDH 200 Query: 168 G-GAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 G A S L ++L L E + A Sbjct: 201 GVSACSASDALAVRGEVL-----LALREGPPAEGDVALARA 236 >gi|148987756|ref|ZP_01819219.1| DNA repair protein RecO [Streptococcus pneumoniae SP6-BS73] gi|147926220|gb|EDK77293.1| DNA repair protein RecO [Streptococcus pneumoniae SP6-BS73] Length = 256 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKCMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 METGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDK 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|306826213|ref|ZP_07459547.1| recombination protein O [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431489|gb|EFM34471.1| recombination protein O [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 256 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID D+LK Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFDTLK 207 >gi|330502447|ref|YP_004379316.1| DNA repair protein RecO [Pseudomonas mendocina NK-01] gi|328916733|gb|AEB57564.1| DNA repair protein RecO [Pseudomonas mendocina NK-01] Length = 229 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 7/145 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A +L R Y E + +++ T Q GR +R + ++ I + + + R R Sbjct: 5 AYVLHSRPYKESSALVDFFTAQ-GRIRAVLRAARG-KVGSIARPFAPLELELRGRGE--- 59 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 LES LL + L+ GL L R LP +P + + + L Sbjct: 60 -LKTVGRLESAGIPLLLTGEALFSGLYLNELLIRLLPAEDPHPAMLEHYGLTLQALAAGR 118 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL +G+G L + Sbjct: 119 PLEPLLRAFEWRLLDELGYGFALDR 143 >gi|270291675|ref|ZP_06197891.1| DNA repair protein RecO [Streptococcus sp. M143] gi|270279760|gb|EFA25601.1| DNA repair protein RecO [Streptococcus sp. M143] Length = 256 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEEGLDYQVLTNIFEIQILTRFGLSLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|15899982|ref|NP_344586.1| DNA repair protein RecO [Streptococcus pneumoniae TIGR4] gi|111656988|ref|ZP_01407795.1| hypothetical protein SpneT_02001779 [Streptococcus pneumoniae TIGR4] gi|149004191|ref|ZP_01828988.1| DNA repair protein RecO [Streptococcus pneumoniae SP14-BS69] gi|149006801|ref|ZP_01830487.1| DNA repair protein RecO [Streptococcus pneumoniae SP18-BS74] gi|149010901|ref|ZP_01832206.1| DNA repair protein RecO [Streptococcus pneumoniae SP19-BS75] gi|149026553|ref|ZP_01836607.1| DNA repair protein RecO [Streptococcus pneumoniae SP23-BS72] gi|168486713|ref|ZP_02711221.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1087-00] gi|168492324|ref|ZP_02716467.1| DNA repair protein RecO [Streptococcus pneumoniae CDC0288-04] gi|169832502|ref|YP_001693558.1| DNA repair protein RecO [Streptococcus pneumoniae Hungary19A-6] gi|182683007|ref|YP_001834755.1| DNA repair protein RecO [Streptococcus pneumoniae CGSP14] gi|221230986|ref|YP_002510138.1| DNA repair protein RecO [Streptococcus pneumoniae ATCC 700669] gi|225853664|ref|YP_002735176.1| DNA repair protein RecO [Streptococcus pneumoniae JJA] gi|225855824|ref|YP_002737335.1| DNA repair protein RecO [Streptococcus pneumoniae P1031] gi|225857898|ref|YP_002739408.1| DNA repair protein RecO [Streptococcus pneumoniae 70585] gi|237649912|ref|ZP_04524164.1| DNA repair protein RecO [Streptococcus pneumoniae CCRI 1974] gi|237822595|ref|ZP_04598440.1| DNA repair protein RecO [Streptococcus pneumoniae CCRI 1974M2] gi|303260673|ref|ZP_07346636.1| DNA repair protein RecO [Streptococcus pneumoniae SP-BS293] gi|303260837|ref|ZP_07346786.1| DNA repair protein RecO [Streptococcus pneumoniae SP14-BS292] gi|303263164|ref|ZP_07349087.1| DNA repair protein RecO [Streptococcus pneumoniae BS397] gi|303267607|ref|ZP_07353448.1| DNA repair protein RecO [Streptococcus pneumoniae BS457] gi|303269477|ref|ZP_07355244.1| DNA repair protein RecO [Streptococcus pneumoniae BS458] gi|307126264|ref|YP_003878295.1| DNA repair protein RecO [Streptococcus pneumoniae 670-6B] gi|20139620|sp|Q97TA7|RECO_STRPN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238688354|sp|B1I7I6|RECO_STRPI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691174|sp|B2IR26|RECO_STRPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|14971500|gb|AAK74226.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gi|147757853|gb|EDK64864.1| DNA repair protein RecO [Streptococcus pneumoniae SP14-BS69] gi|147761716|gb|EDK68680.1| DNA repair protein RecO [Streptococcus pneumoniae SP18-BS74] gi|147764537|gb|EDK71467.1| DNA repair protein RecO [Streptococcus pneumoniae SP19-BS75] gi|147929224|gb|EDK80228.1| DNA repair protein RecO [Streptococcus pneumoniae SP23-BS72] gi|168995004|gb|ACA35616.1| DNA repair protein RecO [Streptococcus pneumoniae Hungary19A-6] gi|182628341|gb|ACB89289.1| DNA repair protein RecO [Streptococcus pneumoniae CGSP14] gi|183570327|gb|EDT90855.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1087-00] gi|183573466|gb|EDT93994.1| DNA repair protein RecO [Streptococcus pneumoniae CDC0288-04] gi|220673446|emb|CAR67913.1| DNA repair protein RecO [Streptococcus pneumoniae ATCC 700669] gi|225721562|gb|ACO17416.1| DNA repair protein RecO [Streptococcus pneumoniae 70585] gi|225724122|gb|ACO19975.1| DNA repair protein RecO [Streptococcus pneumoniae JJA] gi|225724427|gb|ACO20279.1| DNA repair protein RecO [Streptococcus pneumoniae P1031] gi|301793351|emb|CBW35714.1| DNA repair protein RecO [Streptococcus pneumoniae INV104] gi|301801005|emb|CBW33670.1| DNA repair protein RecO [Streptococcus pneumoniae INV200] gi|302637674|gb|EFL68160.1| DNA repair protein RecO [Streptococcus pneumoniae SP14-BS292] gi|302638203|gb|EFL68675.1| DNA repair protein RecO [Streptococcus pneumoniae SP-BS293] gi|302641011|gb|EFL71391.1| DNA repair protein RecO [Streptococcus pneumoniae BS458] gi|302642857|gb|EFL73163.1| DNA repair protein RecO [Streptococcus pneumoniae BS457] gi|302646937|gb|EFL77161.1| DNA repair protein RecO [Streptococcus pneumoniae BS397] gi|306483326|gb|ADM90195.1| DNA repair protein RecO [Streptococcus pneumoniae 670-6B] gi|332076495|gb|EGI86957.1| DNA repair protein RecO [Streptococcus pneumoniae GA17545] gi|332204062|gb|EGJ18127.1| DNA repair protein RecO [Streptococcus pneumoniae GA47901] Length = 256 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDK 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|323141986|ref|ZP_08076837.1| DNA repair protein RecO [Phascolarctobacterium sp. YIT 12067] gi|322413518|gb|EFY04386.1| DNA repair protein RecO [Phascolarctobacterium sp. YIT 12067] Length = 253 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 21/186 (11%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 DDA++L V+++ + T+++G+ + + +LQ + + Sbjct: 11 DDALVLHVKNWQTADKYAVCFTKEHGKLRFIAYGARYEKNIHGRLLQPFANLHI------ 64 Query: 63 AQNLGE-----FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE-REPCLELYDMLNI 116 G+ E+L+ + + + + S L L E R P ELY+ML Sbjct: 65 EVQQGQKIDKLRSCELLQMPKSMDMQQ-MAYAAVAS--ELTAVLTEDRVPQPELYEMLGA 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGAVCR 173 L + + + + LL GF LT CV G Q+ W SP GG +C Sbjct: 122 ALAALMQRNPR-LVVLSYAIKLLAATGFAPQLTHCVHCGEAVTAQENAWFSPLQGGLICS 180 Query: 174 SVGLPY 179 S Y Sbjct: 181 SCRSTY 186 >gi|325134814|gb|EGC57450.1| DNA repair protein RecO [Neisseria meningitidis M13399] gi|325144985|gb|EGC67268.1| DNA repair protein RecO [Neisseria meningitidis M01-240013] gi|325205513|gb|ADZ00966.1| DNA repair protein RecO [Neisseria meningitidis M04-240196] Length = 264 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 82/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 EVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 180 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 227 >gi|193214068|ref|YP_001995267.1| DNA repair protein RecO [Chloroherpeton thalassium ATCC 35110] gi|254790516|sp|B3QU22|RECO_CHLT3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|193087545|gb|ACF12820.1| DNA repair protein RecO [Chloroherpeton thalassium ATCC 35110] Length = 259 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 11/190 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNW 58 M + AI+L +YG+++ I+ TR +G+ G V+ ++ + + +L+ GN + + Sbjct: 1 MIRKTQAIVLRTINYGDQSKIVTFFTRSFGKLTGLVKGYRNPKGKFASVLEIGNDLDLVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIF 117 + + + VL + SS L L + L R E + L ++++L+ Sbjct: 61 YKKDTREVQLITEAVLRAPMLGATSSLEQLSALHQTLELIRLTTENDDAHLGVFELLHAT 120 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGAVCR 173 L + F ++ L+ +GF L+ KCV+TG + L PK V Sbjct: 121 LQKINVSRKNHISFFFYFQVQLISLLGFRLNFQKCVLTGKSLSEKAL----PKDARVVLL 176 Query: 174 SVGLPYAEKM 183 + +A ++ Sbjct: 177 AEHGGFALQL 186 >gi|148996442|ref|ZP_01824160.1| DNA repair protein RecO [Streptococcus pneumoniae SP11-BS70] gi|168576928|ref|ZP_02722770.1| DNA repair protein RecO [Streptococcus pneumoniae MLV-016] gi|194397697|ref|YP_002036757.1| DNA repair protein RecO [Streptococcus pneumoniae G54] gi|307066717|ref|YP_003875683.1| recombinational DNA repair ATPase [Streptococcus pneumoniae AP200] gi|238690829|sp|B5E5I5|RECO_STRP4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|147757017|gb|EDK64056.1| DNA repair protein RecO [Streptococcus pneumoniae SP11-BS70] gi|183577428|gb|EDT97956.1| DNA repair protein RecO [Streptococcus pneumoniae MLV-016] gi|194357364|gb|ACF55812.1| DNA repair protein RecO [Streptococcus pneumoniae G54] gi|306408254|gb|ADM83681.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus pneumoniae AP200] gi|332201965|gb|EGJ16034.1| DNA repair protein RecO [Streptococcus pneumoniae GA41317] Length = 256 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKCMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|124265845|ref|YP_001019849.1| DNA replication and repair protein RecO [Methylibium petroleiphilum PM1] gi|124258620|gb|ABM93614.1| DNA replication and repair protein RecO [Methylibium petroleiphilum PM1] Length = 274 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 8/157 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L + E ++IL++ TR++GR + + +++ +L ++V + R Sbjct: 28 PAYLLHRYDWSESSLILDLFTREHGRVAVAAKGAKRPYSQLRAVLLPFQRLQVAYGVRRP 87 Query: 64 QNLGEFRFEVLESH----CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + L++ +L + L G L + L ++P L+D L Sbjct: 88 REGDGGEVQPLKTAEWAGGPAMLGGAALLTGFYLNELLMKLLARQDPHPALFDAYAHTLP 147 Query: 120 CHKIPSVI--GKIFVQIELMLLKNIGFGLDLTKCVVT 154 EL+LL+ IG +L + +T Sbjct: 148 ALGASDDARVAAALRGFELVLLREIGLLPELGRVTLT 184 >gi|119897935|ref|YP_933148.1| DNA repair protein RecO [Azoarcus sp. BH72] gi|166221882|sp|A1K606|RECO_AZOSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119670348|emb|CAL94261.1| DNA repair protein RecO (recombination protein O) [Azoarcus sp. BH72] Length = 243 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 A +L + E ++I+EV +R +GR + + + +L A + ++W Sbjct: 12 AWVLHTLPWRETSLIVEVFSRDHGRLALVAKGARRPHSAFRGVLMAFQPLLMDWSG---- 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIFL 118 EV A+ L G + L + P +P L+ + Sbjct: 68 -----GGEVRTLVRAEWQGGQPLLTGQALLCGYYLNELLVKLTPRDDPHPNLFVAYADAV 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + Q EL LL+ +G+G++L Sbjct: 123 RELGLGRPPPPVLRQFELALLQELGYGIEL 152 >gi|288916968|ref|ZP_06411340.1| DNA repair protein RecO [Frankia sp. EUN1f] gi|288351677|gb|EFC85882.1| DNA repair protein RecO [Frankia sp. EUN1f] Length = 305 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 85/220 (38%), Gaps = 29/220 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR- 59 ++D+ ++L + E + ++ V+TR+ GR + + S R L+ G V + Sbjct: 2 YRDEGVVLRTMPFAEADRVVTVLTRRNGRVRAVAKGVRRTSSRFGARLEPGTYVDLQLHE 61 Query: 60 SRL------AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R A LG + + + + L++ L ER+P L+ + Sbjct: 62 GRSLDTVTQADILGAYGATIAQEYARYT----AAAVMLETAERLTSE--ERQPAFRLFLL 115 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+G+ L +C + G + +S SGG Sbjct: 116 LVGGLRTLAAGERTPSLVL--DAFLLRSLTVSGYGMALDECALCGESGPHHSLSVASGGV 173 Query: 171 VCRSV-------GLPYAEKMLVLPSFLWKEEQTIDADSLK 203 VC P A ++L L + +A ++ Sbjct: 174 VCPECRPRGAVSTSPAAVRLLA--DLLHGDWDGAEATDVR 211 >gi|255019673|ref|ZP_05291752.1| DNA repair protein RecO [Acidithiobacillus caldus ATCC 51756] gi|254970896|gb|EET28379.1| DNA repair protein RecO [Acidithiobacillus caldus ATCC 51756] Length = 248 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 4/158 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRL 62 +D A +L + + +++LEV+T +GR R + R L+AG + WR R Sbjct: 6 EDHAFVLHRYPFSDSSLVLEVITAGHGRLGLLARGARRPRSALGGLEAGRPFVLRWRGRG 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L E A+L L + R +P EL+ L Sbjct: 66 E--LPTL-VSADEVAPARLPGPWQGLCLFYVNELVLRLTVRNDPVPELFAAYAEVLEDLW 122 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL 160 + + E LL+ +G+ DL C V G L Sbjct: 123 AGARATWHLRRFEQRLLRALGWAADLPYCTVCGTAWKL 160 >gi|325695245|gb|EGD37145.1| recombination protein O [Streptococcus sanguinis SK150] Length = 257 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|332360251|gb|EGJ38065.1| recombination protein O [Streptococcus sanguinis SK1056] Length = 257 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|302878422|ref|YP_003846986.1| DNA repair protein RecO [Gallionella capsiferriformans ES-2] gi|302581211|gb|ADL55222.1| DNA repair protein RecO [Gallionella capsiferriformans ES-2] Length = 241 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 17/158 (10%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 A +L + E +++L+V +R+YGR R + R ++ +L + +R++W + Sbjct: 13 AFVLHCHPFRETSLLLDVYSREYGRMAIVARGARRPRSALRGVLMSFQPLRLSWFGK--- 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIFL 118 EV H A+ +L G + L L + +L+D L Sbjct: 70 ------GEVRTLHSAEWQGGQPYLQGTALMCGFYLNELLINLLARDDAHEQLFDYYRATL 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + E LL+ +G+ L+L +G Sbjct: 124 YRLAHETDHAATLRCFEKHLLQELGYALNLETEAASGS 161 >gi|332363629|gb|EGJ41409.1| recombination protein O [Streptococcus sanguinis SK49] Length = 257 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTSLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|217970711|ref|YP_002355945.1| DNA repair protein RecO [Thauera sp. MZ1T] gi|217508038|gb|ACK55049.1| DNA repair protein RecO [Thauera sp. MZ1T] Length = 252 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 5/155 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 Q A +L + E ++I+E+ R++GR + + +++ +L A + ++W Sbjct: 10 QQPAWVLHTYPWRETSLIVEIFAREHGRVALVAKGARRPHSQLRGVLLAFQPLWMDWSGG 69 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + R E LL + G L R +P L+D + Sbjct: 70 -GEVKTLVRAEWQGGQ--PLLIGRALICGYYLNELLVRLTAREDPHPRLFDAYAEAVRAL 126 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 I + EL LL+ +G+ L +G Sbjct: 127 GRGEAESPILRRFELALLQELGYEAGLANEGDSGE 161 >gi|228993040|ref|ZP_04152963.1| DNA repair protein recO [Bacillus pseudomycoides DSM 12442] gi|228999090|ref|ZP_04158672.1| DNA repair protein recO [Bacillus mycoides Rock3-17] gi|229006638|ref|ZP_04164272.1| DNA repair protein recO [Bacillus mycoides Rock1-4] gi|228754499|gb|EEM03910.1| DNA repair protein recO [Bacillus mycoides Rock1-4] gi|228760707|gb|EEM09671.1| DNA repair protein recO [Bacillus mycoides Rock3-17] gi|228766688|gb|EEM15328.1| DNA repair protein recO [Bacillus pseudomycoides DSM 12442] Length = 252 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 20/201 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVR 55 M+ + + I++ YGE N I+ + +R+ G+ R + R+ I Q G+ + Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASISQLMMHGHFLI 64 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++ LG + E++ S L Y + + +++ L++ML Sbjct: 65 -----QMGSGLGTLQQGEIISSMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEML 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + L+ + + + +L +G C + D + S + GG +C Sbjct: 120 HQTLHYMCEGVDAEVLSLIYQTKMLPVLGMHPYFDTCAICHQEADFVAFSVREGGFLCSR 179 Query: 175 VGL--PYA-------EKMLVL 186 PY K+L L Sbjct: 180 HAQQDPYRIPVGEAVHKLLRL 200 >gi|168493730|ref|ZP_02717873.1| DNA repair protein RecO [Streptococcus pneumoniae CDC3059-06] gi|183576233|gb|EDT96761.1| DNA repair protein RecO [Streptococcus pneumoniae CDC3059-06] Length = 256 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDD 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|229019522|ref|ZP_04176339.1| DNA repair protein recO [Bacillus cereus AH1273] gi|229025764|ref|ZP_04182163.1| DNA repair protein recO [Bacillus cereus AH1272] gi|228735472|gb|EEL86068.1| DNA repair protein recO [Bacillus cereus AH1272] gi|228741778|gb|EEL91961.1| DNA repair protein recO [Bacillus cereus AH1273] Length = 252 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 39/229 (17%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------------PIL 48 M+ + + I++ YGE N I+ + +R++G+ R + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSREFGKVSAMARGAKKPKSRLAAVSQLMTHGHFLI 64 Query: 49 QAGNLVRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC 107 Q G LG + E++ S L Y I + +++ Sbjct: 65 QIG------------SGLGTLQQGEIISSMKEIREDIFLTAYASFIIELTDKATEDKKNN 112 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 L++ML L+ + + + +L +G C + D + S + Sbjct: 113 PYLFEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVRE 172 Query: 168 GGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF-LNK 215 GG +C + + +++ +L +F L++ Sbjct: 173 GGFLCSRHAEQ-------------DQYRIPVGEAVHKLLRLFFHFDLHR 208 >gi|256372044|ref|YP_003109868.1| DNA repair protein RecO [Acidimicrobium ferrooxidans DSM 10331] gi|256008628|gb|ACU54195.1| DNA repair protein RecO [Acidimicrobium ferrooxidans DSM 10331] Length = 249 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 75/181 (41%), Gaps = 8/181 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN-W 58 ++D A++L GE++ + ++TR++G+ VR ++ R++ I+Q ++ V W Sbjct: 4 RYRDLAVVLRTWPLGERDRLALLLTREHGKVRATVRGARAARSRLRGIVQPSAVLDVECW 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNI 116 R R + + + + + ++ L L E + L+ +L Sbjct: 64 RGRELDGVAQAQLVAANL-AGRGDLDPDTVGWCYELLDLADGLSE-DGHGDDALFALLAR 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L ++F + L ++ GFG L +C G +L + P S A C + G Sbjct: 122 GLGLLVEAPSR-ELFAALTLRAVQLAGFGPSLDRCGSCGAEGELTRIDPASQQARCDACG 180 Query: 177 L 177 Sbjct: 181 G 181 >gi|312863966|ref|ZP_07724203.1| DNA repair protein RecO [Streptococcus vestibularis F0396] gi|311100532|gb|EFQ58738.1| DNA repair protein RecO [Streptococcus vestibularis F0396] Length = 257 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 10/206 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y E + ++++ T Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTV-ND 63 Query: 64 QNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L + E + + + S Y L ++ + + +L+ L L Sbjct: 64 EGLSFIEDYSQAESFKEITSDIFKLSYATY-LAALT--DAAIADGVVDAQLFAFLERTLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G L+ +CV S K G +C + Sbjct: 121 LMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEED 180 Query: 180 AEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L Q + + L+ Sbjct: 181 ERRSHLDPNVPYLLDRFQGLSFEELR 206 >gi|146306509|ref|YP_001186974.1| DNA repair protein RecO [Pseudomonas mendocina ymp] gi|145574710|gb|ABP84242.1| DNA replication and repair protein RecO [Pseudomonas mendocina ymp] Length = 229 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 7/145 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A +L R Y E + +++ T Q GR +R + ++ I + + + R R Sbjct: 5 AYVLHSRPYKESSALVDFFTVQ-GRVRAVLRAARG-KVGSIARPFAPLELELRGRGE--- 59 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 LES LL S L+ GL L R LP +P + + + L Sbjct: 60 -LKTVGRLESAGIPLLLSGEALFSGLYLNELLIRLLPAEDPHPVMLEHYGLTLQALAADR 118 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL +G+G L + Sbjct: 119 PLEPLLRAFEWRLLDELGYGFALDR 143 >gi|309800334|ref|ZP_07694504.1| DNA repair protein RecO [Streptococcus infantis SK1302] gi|308116043|gb|EFO53549.1| DNA repair protein RecO [Streptococcus infantis SK1302] Length = 256 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 78/205 (38%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEEGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 ++ + P +L + Q I+ ++L+ Sbjct: 183 KRCHLNPNIPYLLNQFQAINFETLE 207 >gi|262281673|ref|ZP_06059442.1| DNA repair protein recO [Streptococcus sp. 2_1_36FAA] gi|262262127|gb|EEY80824.1| DNA repair protein recO [Streptococcus sp. 2_1_36FAA] Length = 259 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 17/213 (7%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRV 56 M A++L R++ E + ++++ T Q G+ + FV++ + ++ P++Q NL+ Sbjct: 1 MQSITSKALVLYNRNFREDDKLVKIFTEQAGKRMFFVKHATNSKLSPVIQPLTLANLLMK 60 Query: 57 NWRSRLAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 L + + + L + Y +P+ +P L+ Sbjct: 61 V----NDDGLSYIQDYQDVQPFTRINSDLF---IMAYATYVAALADASIPDSQPDAALFA 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L + + E+ +L G L+ +CV T S K G +C Sbjct: 114 FLTKTLELMEEGLDHEILTNIFEVQILSRFGVSLNFHECVFCHRTGLPFDFSFKFSGVLC 173 Query: 173 RSVGLPYAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q ++ +L+ Sbjct: 174 PDHYREDDRRCHLHPNIPFLLDQFQAVEYSTLE 206 >gi|157150562|ref|YP_001449353.1| DNA repair protein RecO [Streptococcus gordonii str. Challis substr. CH1] gi|189039774|sp|A8AU93|RECO_STRGC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157075356|gb|ABV10039.1| DNA repair protein RecO [Streptococcus gordonii str. Challis substr. CH1] Length = 260 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 17/213 (7%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRV 56 M A++L R++ E + ++++ T Q G+ + FV++ + ++ P++Q NL+ Sbjct: 2 MQSITSKALVLYNRNFREDDKLVKIFTEQAGKRMFFVKHATNSKLSPVIQPLTLANLLMK 61 Query: 57 NWRSRLAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 L + + + L + Y +P+ +P L+ Sbjct: 62 V----NDDGLSYIQDYQDVQPFTRINSDLF---IMAYATYVAALADASIPDSQPDAALFA 114 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L + + E+ +L G L+ +CV T S K G +C Sbjct: 115 FLTKTLELMEEGLDHEILTNIFEVQILSRFGVSLNFHECVFCHRTGLPFDFSFKFSGVLC 174 Query: 173 RSVGLPYAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q ++ +L+ Sbjct: 175 PDHYREDDRRCHLHPNIPFLLDQFQAVEYSTLE 207 >gi|297194472|ref|ZP_06911870.1| DNA repair protein recO [Streptomyces pristinaespiralis ATCC 25486] gi|197718717|gb|EDY62625.1| DNA repair protein recO [Streptomyces pristinaespiralis ATCC 25486] Length = 248 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 78/188 (41%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDM 113 R ++ +G + E + + +++ G + RF E EP ++ Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFADHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRSLSRGEHAPHLVL--DAFLLRSLAVNGYAPSFDDCARCGLPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLP 178 +C +P Sbjct: 182 ICGDCRVP 189 >gi|322378207|ref|ZP_08052691.1| DNA repair protein RecO [Streptococcus sp. M334] gi|321280837|gb|EFX57853.1| DNA repair protein RecO [Streptococcus sp. M334] Length = 256 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 78/205 (38%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ + E+ +L G L+ +CV S K G +C Sbjct: 123 MEVGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|332077345|gb|EGI87806.1| DNA repair protein RecO [Streptococcus pneumoniae GA41301] Length = 256 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDASLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|294788250|ref|ZP_06753493.1| DNA repair protein RecO [Simonsiella muelleri ATCC 29453] gi|294483681|gb|EFG31365.1| DNA repair protein RecO [Simonsiella muelleri ATCC 29453] Length = 251 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 18/181 (9%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQN 65 +L + + E ++ +E +R YGR R+ ++ ++ +L + +W + Sbjct: 13 FLLSTKPWRENSLWVEAFSRDYGRVALLARSARTRGSELRGVLIPFVPLSASWYGKE--- 69 Query: 66 LGEFRFEVLESHCAKLLS---SSLFLYGLQSI---VPLFRFLPEREPCLELYDMLNIFLN 119 E+ H A+ L ++ L + +P ++Y L + Sbjct: 70 ------ELKTLHRAEWLGGWAQPHSRALFSAMYVNELLMKLTAREDPHDDIYAALYRVMQ 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 Q E LL +G D + + + + ++ AVC VG + Sbjct: 124 SICTQENHVAALRQFEYALLNTLGVAPDFSLDSNNQLIESEKYYWIRAEEAVCH-VGESF 182 Query: 180 A 180 Sbjct: 183 R 183 >gi|116750901|ref|YP_847588.1| recombination protein O, RecO [Syntrophobacter fumaroxidans MPOB] gi|171460804|sp|A0LP01|RECO_SYNFM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116699965|gb|ABK19153.1| Recombination protein O, RecO [Syntrophobacter fumaroxidans MPOB] Length = 250 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 23/166 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRS- 60 + +AIIL R +GE + ++ + TR GR G + + R + L+ +LV + +R Sbjct: 5 RTEAIILNTRDHGESDRLVGLYTRSGGRLQGIAKGARRSRKRFANTLEPCSLVELQFREK 64 Query: 61 ---------RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 +L + R E++ A L+S + +PE +P EL+ Sbjct: 65 GTLVWLESCKLLEPFLSLRTELIRWGIAALISE-----------IVIEMVPEGDPQPELF 113 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 ++L L + + +G+ L C + G + Sbjct: 114 ELLKETLRQLCEDKDSLNVALLFIFRFQDKMGYLPALENCGICGRS 159 >gi|229013518|ref|ZP_04170652.1| DNA repair protein recO [Bacillus mycoides DSM 2048] gi|229061991|ref|ZP_04199317.1| DNA repair protein recO [Bacillus cereus AH603] gi|229135123|ref|ZP_04263925.1| DNA repair protein recO [Bacillus cereus BDRD-ST196] gi|229169046|ref|ZP_04296762.1| DNA repair protein recO [Bacillus cereus AH621] gi|228614455|gb|EEK71564.1| DNA repair protein recO [Bacillus cereus AH621] gi|228648352|gb|EEL04385.1| DNA repair protein recO [Bacillus cereus BDRD-ST196] gi|228717300|gb|EEL68973.1| DNA repair protein recO [Bacillus cereus AH603] gi|228747755|gb|EEL97624.1| DNA repair protein recO [Bacillus mycoides DSM 2048] Length = 252 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R++G+ R + R+ I Q Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIYSREFGKVSAMARGAKKPKSRLAAISQLMTHGHFLI 64 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + E++ S L Y I + +++ L++ML Sbjct: 65 Q--MGSGLGTLQQGEIISSMKEIREDIFLTAYASFIIELTDKATEDKKHNPYLFEMLYQT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 123 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 182 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 183 QDPYRIPVGEAVHKLLRL 200 >gi|163942054|ref|YP_001646938.1| DNA repair protein RecO [Bacillus weihenstephanensis KBAB4] gi|229470329|sp|A9VHS5|RECO_BACWK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|163864251|gb|ABY45310.1| DNA repair protein RecO [Bacillus weihenstephanensis KBAB4] Length = 248 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R++G+ R + R+ I Q Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIYSREFGKVSAMARGAKKPKSRLAAISQLMTHGHFLI 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + E++ S L Y I + +++ L++ML Sbjct: 61 Q--MGSGLGTLQQGEIISSMKEIREDIFLTAYASFIIELTDKATEDKKHNPYLFEMLYQT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 119 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 178 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 179 QDPYRIPVGEAVHKLLRL 196 >gi|320106411|ref|YP_004182001.1| DNA repair protein RecO [Terriglobus saanensis SP1PR4] gi|319924932|gb|ADV82007.1| DNA repair protein RecO [Terriglobus saanensis SP1PR4] Length = 245 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 10/178 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 QD+AI+L + E ++++ + TR GR G R+ R + L+ VR NW Sbjct: 3 ERQDEAIVLRTWPFQEADLLVSLFTRHQGRVKGVARHAMRSRRRFGGALEPMTYVRANWA 62 Query: 60 SRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + Q L FE+L S + + + L LPE+ P +++ + + Sbjct: 63 EKPRQELVRLNSFEILWSPLREPVDYARSAALSVVAEVLESALPEQAPEDDVFRLALTTI 122 Query: 119 NCHKIPSVIGKI--FVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVC 172 ++ V + F+ LL G+ DL+ C V G + SP GA C Sbjct: 123 ERMQVGEVWLPVTYFLLWVTRLL---GWMPDLSSCAVCGESLRGKGFFYSPARDGATC 177 >gi|148985379|ref|ZP_01818584.1| DNA repair protein RecO [Streptococcus pneumoniae SP3-BS71] gi|147922337|gb|EDK73457.1| DNA repair protein RecO [Streptococcus pneumoniae SP3-BS71] gi|301799221|emb|CBW31737.1| DNA repair protein RecO [Streptococcus pneumoniae OXC141] Length = 256 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|15676358|ref|NP_273494.1| DNA repair protein (recombination protein o) [Neisseria meningitidis MC58] gi|17865562|sp|Q9K0W0|RECO_NEIMB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|7225672|gb|AAF40884.1| DNA repair protein RecO [Neisseria meningitidis MC58] gi|316985790|gb|EFV64733.1| DNA repair protein RecO [Neisseria meningitidis H44/76] gi|325140961|gb|EGC63468.1| DNA repair protein RecO [Neisseria meningitidis CU385] gi|325199634|gb|ADY95089.1| DNA repair protein RecO [Neisseria meningitidis H44/76] Length = 263 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 83/229 (36%), Gaps = 24/229 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V V+W Sbjct: 8 HEPVFMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWVGGWRQPQGRALFGGLYVNELVLKLTAREDPVPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGG-AVC 172 + + + E LL +G DL + G V P++ V Sbjct: 119 EVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVG 178 Query: 173 RSVGLPYAEKMLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + +P +V P +E A+SL+ A ++T F+ ++ L Sbjct: 179 KGFAVPPHAAGVVAPGQSLIDLREGSFRTAESLQQALKITRLFI-RHLL 226 >gi|270283981|ref|ZP_05965342.2| DNA repair protein RecO [Bifidobacterium gallicum DSM 20093] gi|270277851|gb|EFA23705.1| DNA repair protein RecO [Bifidobacterium gallicum DSM 20093] Length = 258 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 72/192 (37%), Gaps = 14/192 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR- 59 ++D+ I+L GE + ++ ++TR +G+ + + + + L+ V + Sbjct: 22 YRDEGIVLRTMKLGEADRVITLLTRDHGKVRAVAKGVRRTKSRFGARLEPFMRVDLLLNE 81 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREP----CLELYDM 113 R + + E + + + + IV + L E EP L Sbjct: 82 GRTFDAI--RQAESVSVYAGAITADYDRYRAATIIVEVINDLASTEHEPVGAQYPLLAGA 139 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 LN P +I +V L + G+ L CVV G L S +SGG +C Sbjct: 140 LNALATARHEPELISNSYV---LRAIAMAGWTPRLDSCVVCGRVDQLTHFSARSGGVMCA 196 Query: 174 SVGLPYAEKMLV 185 + P A ++ Sbjct: 197 TDRTPDAIRIQP 208 >gi|307706918|ref|ZP_07643719.1| DNA repair protein RecO [Streptococcus mitis SK321] gi|307617710|gb|EFN96876.1| DNA repair protein RecO [Streptococcus mitis SK321] Length = 256 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRIGQAFDFSFKYGACLCPDHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|296133899|ref|YP_003641146.1| DNA repair protein RecO [Thermincola sp. JR] gi|296032477|gb|ADG83245.1| DNA repair protein RecO [Thermincola potens JR] Length = 250 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 71/189 (37%), Gaps = 19/189 (10%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLV 54 M ++ DA++L VR + E + I+ + T G+ + + R + +Q GN + Sbjct: 2 MRLYKTDALVLRVRDFSEADRIVTLYTYSRGKVQAIAKGSRKTKSRKRGAVQPFTYGNFL 61 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDM 113 RS L + E ES + L + L + L F E EP ++ Sbjct: 62 LYQGRS-LDT---ITQCEPKES-FSHLREDLVKLAYSTYLTELVDGFTAEGEPNEQV--F 114 Query: 114 LNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCV-VTGVTQDLLW---VSPKSG 168 L + + + + V+ EL LL +G+ L CV G S + G Sbjct: 115 LLLLTTFYLLLKDNPGLLVRAFELKLLNILGYCPQLESCVHCHGPVAGNAAKVRFSSRLG 174 Query: 169 GAVCRSVGL 177 G +C Sbjct: 175 GVLCDKCSG 183 >gi|152976729|ref|YP_001376246.1| DNA repair protein RecO [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189039649|sp|A7GSZ3|RECO_BACCN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|152025481|gb|ABS23251.1| DNA repair protein RecO [Bacillus cytotoxicus NVH 391-98] Length = 248 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 15/214 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R++G+ R + R+ I Q Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISVMARGAKKPKSRLASISQLMTHGHFLI 60 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + E++ S L Y + + +++ L++ML Sbjct: 61 Q--MGSGLGTLQQGEMISSMKEIREDIFLTAYASFIVELTDKATEDKKNNPYLFEMLYQT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 119 LHYMCDGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHQETDFVAFSVREGGFLCFRHAE 178 Query: 178 --PYA-------EKMLVL-PSFLWKEEQTIDADS 201 PY K+L L F + Sbjct: 179 QDPYRIPVGEAVHKLLRLFYHFDLGRLGNVSVKD 212 >gi|327463376|gb|EGF09695.1| recombination protein O [Streptococcus sanguinis SK1057] Length = 257 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|325689108|gb|EGD31115.1| recombination protein O [Streptococcus sanguinis SK115] Length = 257 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|228910132|ref|ZP_04073952.1| DNA repair protein recO [Bacillus thuringiensis IBL 200] gi|228954582|ref|ZP_04116607.1| DNA repair protein recO [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071801|ref|ZP_04205016.1| DNA repair protein recO [Bacillus cereus F65185] gi|229081558|ref|ZP_04214056.1| DNA repair protein recO [Bacillus cereus Rock4-2] gi|229180575|ref|ZP_04307917.1| DNA repair protein recO [Bacillus cereus 172560W] gi|229192507|ref|ZP_04319470.1| DNA repair protein recO [Bacillus cereus ATCC 10876] gi|228591084|gb|EEK48940.1| DNA repair protein recO [Bacillus cereus ATCC 10876] gi|228602999|gb|EEK60478.1| DNA repair protein recO [Bacillus cereus 172560W] gi|228701763|gb|EEL54251.1| DNA repair protein recO [Bacillus cereus Rock4-2] gi|228711396|gb|EEL63356.1| DNA repair protein recO [Bacillus cereus F65185] gi|228805239|gb|EEM51833.1| DNA repair protein recO [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228849649|gb|EEM94483.1| DNA repair protein recO [Bacillus thuringiensis IBL 200] Length = 252 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 20/201 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVR 55 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q G + Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGQFLI 64 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++ LG + + S ++ L Y + + +++ L++ML Sbjct: 65 -----QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEML 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ + + + +L +G C + D + S + GG +C Sbjct: 120 YQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSR 179 Query: 175 VGL--PYA-------EKMLVL 186 PY K+L L Sbjct: 180 HAEQDPYRIPVGEAVHKLLRL 200 >gi|206971346|ref|ZP_03232297.1| DNA repair protein RecO [Bacillus cereus AH1134] gi|206734118|gb|EDZ51289.1| DNA repair protein RecO [Bacillus cereus AH1134] Length = 248 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 20/201 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVR 55 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q G + Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGQFLI 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++ LG + + S ++ L Y + + +++ L++ML Sbjct: 61 -----QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEML 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ + + + +L +G C + D + S + GG +C Sbjct: 116 YQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSR 175 Query: 175 VGL--PYA-------EKMLVL 186 PY K+L L Sbjct: 176 HAEQDPYRIPVGEAVHKLLRL 196 >gi|125716910|ref|YP_001034043.1| DNA repair protein RecO [Streptococcus sanguinis SK36] gi|166221914|sp|A3CJY8|RECO_STRSV RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|125496827|gb|ABN43493.1| DNA repair protein recO, putative [Streptococcus sanguinis SK36] gi|328944823|gb|EGG38984.1| recombination protein O [Streptococcus sanguinis SK1087] Length = 257 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|309378286|emb|CBX23074.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 263 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 83/229 (36%), Gaps = 24/229 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V V+W Sbjct: 8 HEPVFMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWVGGWRQPQGRALFGGLYVNELVLKLTAREDPVPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGG-AVC 172 + + + E LL +G DL + G V P++ V Sbjct: 119 KVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVG 178 Query: 173 RSVGLPYAEKMLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + +P +V P +E A+SL+ A ++T F+ ++ L Sbjct: 179 KGFAVPPHAAGVVAPGQSLIDLREGSFRTAESLQQALKITRLFI-RHLL 226 >gi|329894311|ref|ZP_08270181.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC3088] gi|328923107|gb|EGG30430.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC3088] Length = 237 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 11/155 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI----LQAGNLVRV 56 M Q A +L R + E + I+++ T + GR V+ + R+ LQ + V Sbjct: 3 MGIQQPAFLLRKRPFQESSEIVDLFTPERGRVSCVVKGAKRKRLGGSLSQRLQLFRPLVV 62 Query: 57 NWRSRLAQNLGEFR--FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++ R G+ + + E H L F + L R L + E EL+ Sbjct: 63 RFQGR-----GDLKTLLDAEELHEPYTLFGEGFYAAHYANELLLRVLQQEESYAELFADY 117 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 L + S + E +L+ +G DL+ Sbjct: 118 ASLLEVLEADSSPRAPIRRFEWSILQTLGAEPDLS 152 >gi|324992721|gb|EGC24642.1| recombination protein O [Streptococcus sanguinis SK405] Length = 257 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 EMMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|73748418|ref|YP_307657.1| recombination protein RecO [Dehalococcoides sp. CBDB1] gi|92087028|sp|Q3ZWX7|RECO_DEHSC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|73660134|emb|CAI82741.1| recombination protein RecO [Dehalococcoides sp. CBDB1] Length = 253 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 65/190 (34%), Gaps = 35/190 (18%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++ AII+ GE + IL ++T G GF ++ + + S+ Sbjct: 6 DFKTKAIIVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTK----------------SK 49 Query: 62 LAQNLGEFRFEVLESHCAKLLSS-----------------SLFLYGLQSIVPLFRFLPER 104 L+ +L + + K + + L + + F PE Sbjct: 50 LSGHLELLCYSEVSLARGKAIDTITGSQTIQSFLNIRNSLQLSAMAFYACELAYHFSPEE 109 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLW 162 ++ +L L S E+ LL + G+ +L +C + + Sbjct: 110 AANPAMFQLLLSTLEELDNGSQPELCLKYFEINLLASSGYKPELRECANCHKKLQATINY 169 Query: 163 VSPKSGGAVC 172 SP+SGG +C Sbjct: 170 YSPESGGVIC 179 >gi|325128807|gb|EGC51667.1| DNA repair protein RecO [Neisseria meningitidis N1568] Length = 264 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 81/233 (34%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWGGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 180 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 227 >gi|297539122|ref|YP_003674891.1| DNA repair protein RecO [Methylotenera sp. 301] gi|297258469|gb|ADI30314.1| DNA repair protein RecO [Methylotenera sp. 301] Length = 245 Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 7/144 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +GR + + R M+ +LQ+ + W +L Sbjct: 16 YVLHTYPFKETSLVVELFAYGFGRVATTAKGARRPRSAMRGMLQSFQPLLATWSGKLE-- 73 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LE LL L G L R LP +P L++ + L Sbjct: 74 --LKTLHSLEWGSGLLLLKGEALMCGFYLNELLLRLLPREDPHESLFEYYSATLKILANG 131 Query: 125 SVIGKIFVQIELMLLKNIGFGLDL 148 + + EL LL+ +G+ + L Sbjct: 132 ENLATTLRRFELKLLQELGYAIPL 155 >gi|147669198|ref|YP_001214016.1| DNA repair protein RecO [Dehalococcoides sp. BAV1] gi|289432466|ref|YP_003462339.1| DNA repair protein RecO [Dehalococcoides sp. GT] gi|189039655|sp|A5FRN7|RECO_DEHSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146270146|gb|ABQ17138.1| DNA replication and repair protein RecO [Dehalococcoides sp. BAV1] gi|288946186|gb|ADC73883.1| DNA repair protein RecO [Dehalococcoides sp. GT] Length = 253 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 64/190 (33%), Gaps = 35/190 (18%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++ AII+ GE + IL ++T G GF ++ + S+ Sbjct: 6 DFKTKAIIVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTT----------------SK 49 Query: 62 LAQNLGEFRFEVLESHCAKLLSS-----------------SLFLYGLQSIVPLFRFLPER 104 L+ +L + + K + + L + + F PE Sbjct: 50 LSGHLELLCYSEVSLARGKAIDTITGSQTIQSFLNIRNSLQLSAMAFYACELAYHFSPEE 109 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLW 162 L+ +L L S E+ LL + G+ +L +C + + Sbjct: 110 AANPALFQLLLSTLEELDNGSQPELCLKYFEINLLASSGYKPELRECANCHKKLQATINY 169 Query: 163 VSPKSGGAVC 172 SP+SGG +C Sbjct: 170 YSPESGGVIC 179 >gi|229086867|ref|ZP_04219027.1| DNA repair protein recO [Bacillus cereus Rock3-44] gi|228696442|gb|EEL49267.1| DNA repair protein recO [Bacillus cereus Rock3-44] Length = 252 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + II+ YGE N I+ + +R++G+ R + R+ I Q Sbjct: 5 MFQKVEGIIIRTTDYGETNKIVTIFSREFGKVSAMARGAKKPKSRLASISQLMTHGHFLI 64 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + E++ S L Y + + +++ L++ML Sbjct: 65 Q--MGSGLGTLQQGEIISSMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 123 LHYMCEGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHHEADFVAFSVREGGFLCSHHAE 182 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 183 QDPYRIPVGEAVHKLLRL 200 >gi|195977176|ref|YP_002122420.1| DNA repair protein RecO [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|238689840|sp|B4U5G6|RECO_STREM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|195973881|gb|ACG61407.1| DNA recombination and repair protein RecO [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 256 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 77/210 (36%), Gaps = 11/210 (5%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L ++Y E + ++++ T G+ + FV++ ++ P++Q + Sbjct: 1 MRIQRSLGIVLYNKNYREDDKLVKIFTEAAGKRMFFVKHIGRSKLAPVVQPLTAADFLLK 60 Query: 60 SRLAQNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 +L + E S Y L +P+ EP +L+ L Sbjct: 61 I-NDSSLSYIEDYNQVEAYRHINEDFFRLSYASYVLALA---DAAIPDNEPDPQLFAFLK 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + E+ +L G ++ CV T S K G +C Sbjct: 117 KTLDLIEEGLDYDILTNIFEIQILDRFGVRMNFHDCVFCHSTNLPFDFSHKYSGVLCPQH 176 Query: 176 GLPYAEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L QTI+ D LK Sbjct: 177 YHEDEGRYGLDPNVIYLINRFQTINIDELK 206 >gi|331265463|ref|YP_004325093.1| DNA repair protein RecO [Streptococcus oralis Uo5] gi|326682135|emb|CBY99751.1| DNA repair protein RecO [Streptococcus oralis Uo5] Length = 256 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 78/205 (38%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + F+++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFIKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDSPLFAFLKKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGIDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPDHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 ++ + P +L + Q ID ++L+ Sbjct: 183 KRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|225869508|ref|YP_002745455.1| DNA repair protein RecO [Streptococcus equi subsp. equi 4047] gi|225698912|emb|CAW91910.1| DNA repair protein RecO [Streptococcus equi subsp. equi 4047] Length = 256 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 79/217 (36%), Gaps = 11/217 (5%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L ++Y E + ++++ T G+ + FV++ ++ P++Q + Sbjct: 1 MRIQRSLGIVLYNKNYREDDKLVKIFTEAAGKRMFFVKHIGRSKLAPVVQPLTAADFLLK 60 Query: 60 SRLAQNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 +L + E S Y L +P+ EP +L+ L Sbjct: 61 I-NDSSLSYIEDYNQVEAYRHINEDFFRLSYASYVLALA---DAAIPDNEPDPQLFAFLK 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + E+ +L G ++ CV T S K G +C Sbjct: 117 KTLDLMEEGLDYDILTNIFEVQILDRFGVRMNFHDCVFCHRTNLPFDFSHKYSGVLCPQH 176 Query: 176 GLPYAEKMLVLPS--FLWKEEQTIDADSLKSAFQLTD 210 + + P+ +L QT++ D LK+ T Sbjct: 177 YHEDERRYGLDPNVIYLLNRFQTLNIDELKTISVNTG 213 >gi|322517630|ref|ZP_08070495.1| recombination protein O [Streptococcus vestibularis ATCC 49124] gi|322123707|gb|EFX95292.1| recombination protein O [Streptococcus vestibularis ATCC 49124] Length = 257 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 10/206 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y E + ++++ T Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTV-ND 63 Query: 64 QNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L + E + + + S Y L ++ + + +L+ L L Sbjct: 64 EGLSFIEDYSQAESFKEITSDIFKLSYATY-LAALT--DAAIADGVVDAQLFAFLKKTLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G L+ +CV S K G +C + Sbjct: 121 LMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEED 180 Query: 180 AEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L Q + + L+ Sbjct: 181 ERRSHLDPNVPYLLDRFQGLSFEELR 206 >gi|226226896|ref|YP_002761002.1| DNA repair protein RecO [Gemmatimonas aurantiaca T-27] gi|226090087|dbj|BAH38532.1| DNA repair protein RecO [Gemmatimonas aurantiaca T-27] Length = 249 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 87/246 (35%), Gaps = 38/246 (15%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR--VNWRSRLA 63 DAI+L V Y E + IL ++TR+ G R +S R + G V +++L Sbjct: 7 DAIVLHVADYMESSRILRLVTRESGVVSVLARGARSSRKRF----GAAVDLFAEGQAQLQ 62 Query: 64 QNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 G F+V + LS F G R + + EP +Y++L L Sbjct: 63 TKPGRDLHTLVSFDVTRARAGLALSLVRFSAGSAIAEVALRLIHD-EPAPMVYELLADGL 121 Query: 119 NCHKIPSVI----GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW---VSPKSGGAV 171 + + V ML+ +GF L C D ++GG + Sbjct: 122 DRLATADDAHATSTALGVLW--MLISEVGFRPSLDACAECHTPLDPAASARFHHRAGGTL 179 Query: 172 CRSVGLPYAEKMLV----LPS--------FLWKEEQTIDADSLKSAFQLTDYFLNKYALQ 219 C G ++ LP +L + TI + ++ +L FL+++ Sbjct: 180 CDRCG-----RLSPGGRLLPPEAIHTVRLWLENQVPTIADNDARAHQRLLREFLSQHLPD 234 Query: 220 HNIIHC 225 + Sbjct: 235 RRPLRA 240 >gi|15902080|ref|NP_357630.1| DNA repair protein RecO [Streptococcus pneumoniae R6] gi|116517190|ref|YP_815471.1| DNA repair protein RecO [Streptococcus pneumoniae D39] gi|225860077|ref|YP_002741586.1| DNA repair protein RecO [Streptococcus pneumoniae Taiwan19F-14] gi|298230683|ref|ZP_06964364.1| DNA repair protein RecO [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254791|ref|ZP_06978377.1| DNA repair protein RecO [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501826|ref|YP_003723766.1| DNA repair protein RecO [Streptococcus pneumoniae TCH8431/19A] gi|42559474|sp|Q8DRN4|RECO_STRR6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|122279548|sp|Q04N32|RECO_STRP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|15457567|gb|AAK98840.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077766|gb|ABJ55486.1| DNA repair protein RecO [Streptococcus pneumoniae D39] gi|225726945|gb|ACO22796.1| DNA repair protein RecO [Streptococcus pneumoniae Taiwan19F-14] gi|298237421|gb|ADI68552.1| DNA repair protein RecO [Streptococcus pneumoniae TCH8431/19A] gi|327390451|gb|EGE88791.1| DNA repair protein RecO [Streptococcus pneumoniae GA04375] Length = 256 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGTCLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|116626995|ref|YP_819614.1| DNA repair protein RecO [Streptococcus thermophilus LMD-9] gi|122268400|sp|Q03N04|RECO_STRTD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116100272|gb|ABJ65418.1| DNA replication and repair protein RecO [Streptococcus thermophilus LMD-9] Length = 257 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 10/206 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +IL R+Y E + ++++ T+Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGVILFNRNYRENDKLVKIFTKQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTV-ND 63 Query: 64 QNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L + E + + + S Y L ++ + + EL+ L L Sbjct: 64 EGLSFIEDYSQAESFKEITSDIFKLSYATY-LAALT--DAAIADGVVDAELFAFLEKTLV 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G L+ +CV S K G +C + Sbjct: 121 LMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEED 180 Query: 180 AEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L Q + + L+ Sbjct: 181 ERRSHLDPNVPYLLDRFQGLSFEELR 206 >gi|289166952|ref|YP_003445219.1| hypothetical protein smi_0052 [Streptococcus mitis B6] gi|288906517|emb|CBJ21349.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 256 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHVGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDASLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRIGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|253996998|ref|YP_003049062.1| DNA repair protein RecO [Methylotenera mobilis JLW8] gi|253983677|gb|ACT48535.1| DNA repair protein RecO [Methylotenera mobilis JLW8] Length = 248 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 7/144 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +R++GR + + M+ +LQA + W +L Sbjct: 15 YVLHTYPFKETSLVVELFSREFGRVATTAKGARRPRSAMRGMLQAFQPMLATWSGKLE-- 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LE + LL L G L R LP +P L+ L Sbjct: 73 --LKTLHGLEWNGCLLLLQGEALMCGFYLNELLLRLLPREDPHEALFAYYAETLKALASE 130 Query: 125 SVIGKIFVQIELMLLKNIGFGLDL 148 + + EL L+ +G+ + L Sbjct: 131 QHLATTLRRFELKFLQELGYAIPL 154 >gi|134300314|ref|YP_001113810.1| DNA repair protein RecO [Desulfotomaculum reducens MI-1] gi|172044328|sp|A4J7D2|RECO_DESRM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|134053014|gb|ABO50985.1| DNA replication and repair protein RecO [Desulfotomaculum reducens MI-1] Length = 256 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 74/199 (37%), Gaps = 27/199 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---------- 50 ++ DAI+L R E + IL V + Q G+ R + +Q Sbjct: 4 YKLDAIVLKSRDMREADKILTVYSIQRGKQRIVAHGAAKPNSRKRGAVQPFCFSEFMLHR 63 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 G + ++ L + E R+++ A ++ L F+ E EP L Sbjct: 64 GREIDAISQAELKEGFAEIRYDLDRLTAAAYITE-----------LLDGFVAEGEPNQNL 112 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSG 168 + +L L+ + + I E LL G DLT C V G + + + + G Sbjct: 113 FSLLYSALHLIAVGNS-EMILRGFEAKLLGFSGLQPDLTNCSVCGAEIRETKVSFAVQQG 171 Query: 169 GAVCRSVGLPYAEKMLVLP 187 G +C+ + +++L Sbjct: 172 GILCKDCAT-HEKRILKFS 189 >gi|77918211|ref|YP_356026.1| RecO-domain-containing DNA repair protein [Pelobacter carbinolicus DSM 2380] gi|90103523|sp|Q3A8N7|RECO_PELCD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|77544294|gb|ABA87856.1| DNA replication and repair protein RecO [Pelobacter carbinolicus DSM 2380] Length = 258 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 9/160 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 DA++L YGE + I+ + + + G G R + R + L+ + V + W+SR Sbjct: 5 SSDAVVLHHFDYGEADRIVTLFSLEKGLIKGIARQARKSRKRFGAALEPFSTVHMRWQSR 64 Query: 62 LAQNLGEFR-FEVLESHCAK---LLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++L + E+++ LL+ +L YG + + L E +YD+L F Sbjct: 65 SGRDLVTLQDAELIDLRSGLRHNLLAMALAAYGCELVENLVG---ETGAQPPVYDLLTAF 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 L + + +EL LL G+ L C G + Sbjct: 122 LTHVNHHGGSEEARLLLELRLLCLSGYAPHLVHCCKCGAS 161 >gi|255065035|ref|ZP_05316890.1| DNA repair protein RecO [Neisseria sicca ATCC 29256] gi|255050456|gb|EET45920.1| DNA repair protein RecO [Neisseria sicca ATCC 29256] Length = 262 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +EV +R+YGR R+ + + ++ +L V +W Sbjct: 24 HEPVFLLASAPWRESSLWVEVFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 80 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 81 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYINELMLKLTTREDPIPELYDALE 134 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + S + E LL +GF DL Sbjct: 135 AVMRAVCGESGHTAALRRFEWTLLNRLGFAPDL 167 >gi|312959175|ref|ZP_07773694.1| DNA repair protein [Pseudomonas fluorescens WH6] gi|311286945|gb|EFQ65507.1| DNA repair protein [Pseudomonas fluorescens WH6] Length = 228 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R + + Sbjct: 9 PAYVLHSRAYRETSALVDFLTPQ-GRLRAVLRSARGKAGT-LARPFVALDVEFRGKGELK 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + + L+ GL L R LP +P ++D L Sbjct: 67 NVG--RLESVGTSA--WLNGDALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEG 122 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G +L Sbjct: 123 RPLEPLLRAFEWRLLDDLGYGFELAN 148 >gi|332975247|gb|EGK12147.1| recombination protein O [Kingella kingae ATCC 23330] Length = 242 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 17/148 (11%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQN 65 +L + + E ++ LEV ++ YGR R+ ++ ++ +L + V+W + Sbjct: 11 FVLSSKPWRETSLWLEVFSQNYGRVALLARSARTRGSELRGVLVPFVPISVSWFGKE--- 67 Query: 66 LGEFRFEVLESHCAKLLS------SSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 E+ H A+ L + + + + + +P +Y L + Sbjct: 68 ------ELKTIHRAEWLGGWAQPKNRALFSAMYANELVLKLTVREDPNPAIYQALQQLMQ 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLD 147 + E LL +G+ D Sbjct: 122 QIAQATSHTAALRYFEWQLLNALGYAPD 149 >gi|322376091|ref|ZP_08050601.1| DNA repair protein RecO [Streptococcus sp. C300] gi|321279041|gb|EFX56084.1| DNA repair protein RecO [Streptococcus sp. C300] Length = 256 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 78/205 (38%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQP--LVLAIFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGIDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPDHFHEDE 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 ++ + P +L + Q ID ++L+ Sbjct: 183 KRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|325697191|gb|EGD39077.1| recombination protein O [Streptococcus sanguinis SK160] Length = 257 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 73/207 (35%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAVKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNDGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ FL + Q + L+ Sbjct: 181 DERRCHLNPNLLFLLDQFQAVRFSELE 207 >gi|228941463|ref|ZP_04104014.1| DNA repair protein recO [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228960563|ref|ZP_04122212.1| DNA repair protein recO [Bacillus thuringiensis serovar pakistani str. T13001] gi|228974394|ref|ZP_04134963.1| DNA repair protein recO [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980987|ref|ZP_04141290.1| DNA repair protein recO [Bacillus thuringiensis Bt407] gi|229048017|ref|ZP_04193593.1| DNA repair protein recO [Bacillus cereus AH676] gi|229111771|ref|ZP_04241319.1| DNA repair protein recO [Bacillus cereus Rock1-15] gi|229146883|ref|ZP_04275248.1| DNA repair protein recO [Bacillus cereus BDRD-ST24] gi|228636711|gb|EEK93176.1| DNA repair protein recO [Bacillus cereus BDRD-ST24] gi|228671765|gb|EEL27061.1| DNA repair protein recO [Bacillus cereus Rock1-15] gi|228723474|gb|EEL74843.1| DNA repair protein recO [Bacillus cereus AH676] gi|228778778|gb|EEM27042.1| DNA repair protein recO [Bacillus thuringiensis Bt407] gi|228785444|gb|EEM33454.1| DNA repair protein recO [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228799163|gb|EEM46131.1| DNA repair protein recO [Bacillus thuringiensis serovar pakistani str. T13001] gi|228818244|gb|EEM64318.1| DNA repair protein recO [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 252 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 65 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 123 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 182 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 183 QDPYRIPVGEAVHKLLRL 200 >gi|296504792|ref|YP_003666492.1| DNA repair protein RecO [Bacillus thuringiensis BMB171] gi|296325844|gb|ADH08772.1| DNA repair protein RecO [Bacillus thuringiensis BMB171] gi|326942080|gb|AEA17976.1| DNA repair protein RecO [Bacillus thuringiensis serovar chinensis CT-43] Length = 248 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 61 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 119 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 178 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 179 QDPYRIPVGEAVHKLLRL 196 >gi|332289406|ref|YP_004420258.1| DNA repair protein RecO [Gallibacterium anatis UMN179] gi|330432302|gb|AEC17361.1| DNA repair protein RecO [Gallibacterium anatis UMN179] Length = 220 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 10/141 (7%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRF-EVLESH 77 ++++ T YG + ++ R ++ +LQ + + W R G + E+ Sbjct: 2 LVDLFTEHYGCITLLAKGARAKRSPLKSLLQPFTPLLLRWSGR-----GTLKILTKAEAI 56 Query: 78 CAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI-PSVIGKIFVQIE 135 L ++ LY G L R L + EL+ L + + E Sbjct: 57 SVTLPMQTVALYSGFYVNELLVRTLEQETAYPELFHEYLRCLTGLAANGDQVEATLRRFE 116 Query: 136 LMLLKNIGFGLDLTKCVVTGV 156 MLLK +G+G+D C +G Sbjct: 117 FMLLKALGYGIDFEHCAGSGE 137 >gi|257093155|ref|YP_003166796.1| DNA repair protein RecO [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045679|gb|ACV34867.1| DNA repair protein RecO [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 238 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 18/152 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V +R +GR R + R ++ +L A + + W R Sbjct: 11 PAFVLHAYPYSETSLIIDVFSRDFGRVALLARGARRPRSVLRGVLLAFQPLELAWAGR-- 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIF 117 EV A+ L G L LP + L+ + Sbjct: 69 -------GEVQTLMKAEWQGGQPLLAGKSLFCGYYLNELLMNLLPREDAHARLFAVYAET 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 L + E LL+ +G+GL L Sbjct: 122 LRRFADGAQ-EADLRCFERALLQELGYGLLLE 152 >gi|228923050|ref|ZP_04086343.1| DNA repair protein recO [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836683|gb|EEM82031.1| DNA repair protein recO [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 252 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 65 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 123 LHYMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 182 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 183 QDPYRIPVGEAVHKLLRL 200 >gi|295695441|ref|YP_003588679.1| DNA repair protein RecO [Bacillus tusciae DSM 2912] gi|295411043|gb|ADG05535.1| DNA repair protein RecO [Bacillus tusciae DSM 2912] Length = 261 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 70/191 (36%), Gaps = 15/191 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M Q + I+L YGE + I+ ++T + G+ R + R++ ++Q LVR + Sbjct: 1 MNVQVEGIVLRGVDYGETHRIVTLLTPEIGKVGAMARGAKRPQSRLRALVQP--LVRGTF 58 Query: 59 R-SRLAQNLGEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLN 115 + Q + R + + + L+ Y + + RF+ E P +Y+ Sbjct: 59 SLAYRGQGMAIIR-QGQWLEGYRAIQEDLWKHAYAGYAAELVDRFVEEATPDPGVYEFFR 117 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 +L + EL + + G L +C G +V S Sbjct: 118 QWLEALAAGKDAEILTRLFELHVCEWAGVRPVLDRCAGCGAAVG--YV-----RMFDLSG 170 Query: 176 GLPYAEKMLVL 186 G P ++ L Sbjct: 171 GGPLCDRCFDL 181 >gi|229588603|ref|YP_002870722.1| DNA repair protein RecO [Pseudomonas fluorescens SBW25] gi|229360469|emb|CAY47326.1| DNA repair protein [Pseudomonas fluorescens SBW25] Length = 229 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 7/145 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-QN 65 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R + +N Sbjct: 11 AYVLHSRAYRETSALVDFLTPQ-GRLRAVLRSARGKAGT-LARPFVALDVEFRGKGELKN 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G R E + + L+ GL L R LP +P ++D L Sbjct: 69 VG--RLESVGTSA--WLNGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLIALAEGR 124 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G +L Sbjct: 125 PLEPLLRAFEWRLLDDLGYGFELNN 149 >gi|294664537|ref|ZP_06729882.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605699|gb|EFF49005.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 240 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVNWRS 60 + +L VR++ E ++++EV+T Q+GR R Q R ++ LQ L++ + Sbjct: 5 HERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQFSAVQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L + R + A L+ L G L R P +P ELY + Sbjct: 65 RGE--LAQLR-QADALDTAPRLAGDTMLAGFYISELLLRLAPRNDPVPELYACYAQVRSH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +L+ +GF DL Sbjct: 122 LASDLPLAWGLRRFERDVLEGLGFAFDL 149 >gi|320529425|ref|ZP_08030513.1| DNA repair protein RecO [Selenomonas artemidis F0399] gi|320138391|gb|EFW30285.1| DNA repair protein RecO [Selenomonas artemidis F0399] Length = 242 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 9/186 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGN---LVRVN 57 M + + IILG +++GE + ++ V TR+ G R + L AG V + Sbjct: 1 MLYTAEGIILGAKNWGEADKVMTVFTRERGMLRAAAFG--CRRPRSAL-AGAMQMFVHAD 57 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNI 116 ++ L + V+ +H AKL + L + + R FLPE P + +D L Sbjct: 58 FQLAEGPRLETVKTAVVRAHHAKLSADLTALAYATFVAEVVREFLPEGVPDEQFFDRLAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSV 175 L + + + L +L G G +C+ G + + GGA+C Sbjct: 118 ILTAFETRNPRITALAAV-LQILSAAGLGQTYERCLHCGTEITGNAFFHAREGGALCAGC 176 Query: 176 GLPYAE 181 AE Sbjct: 177 RTADAE 182 >gi|40063416|gb|AAR38227.1| DNA repair protein RecO [uncultured marine bacterium 580] Length = 236 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 57/149 (38%), Gaps = 17/149 (11%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQN 65 +L + E ++I+E+ ++ +GR + + ++ +LQ+ + +W Sbjct: 14 YVLHTYPFKETSLIVEIFSKAFGRVSLVAKGARRPKSALRGMLQSFQALEASWSG----- 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL------FRFLPEREPCLELYDMLNIFLN 119 +G E+ H L + G I R LP+ + L+D + + Sbjct: 69 IG----ELKTLHGIDWCDQYLPMEGNSLICGFYLNELLLRLLPKEDNYESLFDFYHTTME 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 IG + EL LL +G+ + L Sbjct: 125 NLSQGVNIGVTLRRFELKLLLELGYEVVL 153 >gi|269218573|ref|ZP_06162427.1| DNA repair protein RecO [Actinomyces sp. oral taxon 848 str. F0332] gi|269211684|gb|EEZ78024.1| DNA repair protein RecO [Actinomyces sp. oral taxon 848 str. F0332] Length = 243 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D+AI+L GE + I+ +R++G+ G + + + + L+ ++V + + Sbjct: 4 YRDEAIVLRTHDLGEADRIITFFSRRHGKMRGVAKGVRRTKSRFGARLEPFSMVDLQLYE 63 Query: 60 SR-LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R L + + + + + E EP Y +L+ + Sbjct: 64 GRTLDVVTEAATLNPYGRSIGRDYDAYTCACVIAEVADKLAAI-EEEPDQAHYLLLHGAI 122 Query: 119 NCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + V L + G+GL L +C V G + L +SGG VC Sbjct: 123 HALATGAHRPALVVDSYILRAMALHGWGLSLYECAVCGRGEGLAAFHLQSGGVVCSDC 180 >gi|322386409|ref|ZP_08060039.1| recombination protein O [Streptococcus cristatus ATCC 51100] gi|321269633|gb|EFX52563.1| recombination protein O [Streptococcus cristatus ATCC 51100] Length = 265 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 8/201 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA--GNLVRVNWRSRLAQN 65 +IL R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 10 LILYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAAELLMKIN---DDG 66 Query: 66 LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 L ++ +ES+ + Y + + +P L+ L L+ Sbjct: 67 LSYIEDYQAVESYGQIKDDLFVMAYASYVAALADASIQDNQPDPALFAFLQKTLDLMNQG 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L G L+ CV T S + GG +C + Sbjct: 127 LDYEVLTNIFEIQILSRFGVSLNFHDCVFCHRTGLPFDFSFQYGGVLCPDHYHKDDHRSH 186 Query: 185 VLP--SFLWKEEQTIDADSLK 203 + P FL + Q + L+ Sbjct: 187 LNPNIPFLLNQFQAVQFSELE 207 >gi|313818468|gb|EFS56182.1| DNA repair protein RecO [Propionibacterium acnes HL046PA2] Length = 443 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 18/179 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D A++L GE + I+ +++R++G L R + S + L NLV + + Sbjct: 21 YRDQAVVLRTHKLGEADRIVSMLSREHGNILPLARGIRRTSSKFGARLDPFNLVDLQLVQ 80 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 R + E L + A L SLF + +P +REP Y +L Sbjct: 81 GRNLD--VVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGA 138 Query: 118 LNCHKI--------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 L P ++ ++ L L G+ DL CV G SP G Sbjct: 139 LRVLGQGTTDGPRPPEMVLDSYL---LRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLG 194 >gi|254519864|ref|ZP_05131920.1| DNA repair protein RecO [Clostridium sp. 7_2_43FAA] gi|226913613|gb|EEH98814.1| DNA repair protein RecO [Clostridium sp. 7_2_43FAA] Length = 246 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 17/183 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNWRSR 61 A+++ + + E + ++ + T G+ + + + + + L G V +S Sbjct: 8 AVVIKTKEFKENDKLVWLYTNNLGKITAIAKGARKSKSKLLSLTLPLCYGEYVLFKGKS- 66 Query: 62 LAQNLGEFRFEV--LESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL 118 F + + + LL + L I L + E E L+ + Sbjct: 67 ------LFNLQEGKITNSFQGLLDNLDKLTYSSYICELIDICVEEGEVNEGLFKDFLTCM 120 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSVG 176 ++ ++ ++ EL LLK G+GL+L CV + ++S G VC Sbjct: 121 YLLNTDALDYEMLIRSFELRLLKATGYGLNLESCVSCRKKISVSNYISLSHYGGVCEECS 180 Query: 177 LPY 179 + Sbjct: 181 REH 183 >gi|237734395|ref|ZP_04564876.1| recombination protein O [Mollicutes bacterium D7] gi|229382625|gb|EEO32716.1| recombination protein O [Coprobacillus sp. D7] Length = 253 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 93/238 (39%), Gaps = 28/238 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW--RSRL 62 ++L + Y E +++L + T YG+ + + + P Q L + RS L Sbjct: 16 GLVLKNKPYKENDMLLWIYTHDYGKLALIAKGVKKLKSKNAPSCQTITLSEFTFIPRSGL 75 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + +E L Y +++F + +P +Y+ L + L + Sbjct: 76 SN---LIKGAPVEYFRYIKEDIELEAYASYFCEFVYKFTKDNDPDETIYNTLLLALRSLQ 132 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 +++ +++ G L++ +CV G + VS SGG VC+ Y +K Sbjct: 133 TGYNPKLVYLLFNAFIMEKTGSSLEVDQCVSCGRLDHISGVSIHSGGFVCQECIGMYDQK 192 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 + V + F+ ++NK+ L+ I L EN + +L+ ++ Sbjct: 193 LTV---------------DVLKGFR----YINKWQLE--NIDMLHLEENIIDELMPIM 229 >gi|167755647|ref|ZP_02427774.1| hypothetical protein CLORAM_01162 [Clostridium ramosum DSM 1402] gi|167704586|gb|EDS19165.1| hypothetical protein CLORAM_01162 [Clostridium ramosum DSM 1402] Length = 248 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 93/238 (39%), Gaps = 28/238 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW--RSRL 62 ++L + Y E +++L + T YG+ + + + P Q L + RS L Sbjct: 11 GLVLKNKPYKENDMLLWIYTHDYGKLALIAKGVKKLKSKNAPSCQTITLSEFTFIPRSGL 70 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + +E L Y +++F + +P +Y+ L + L + Sbjct: 71 SN---LIKGAPVEYFRYIKEDIELEAYASYFCEFVYKFTKDNDPDETIYNTLLLALRSLQ 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 +++ +++ G L++ +CV G + VS SGG VC+ Y +K Sbjct: 128 TGYNPKLVYLLFNAFIMEKTGSSLEVDQCVSCGRLDHISGVSIHSGGFVCQECIGMYDQK 187 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 + V + F+ ++NK+ L+ I L EN + +L+ ++ Sbjct: 188 LTV---------------DVLKGFR----YINKWQLE--NIDMLHLEENIIDELMPIM 224 >gi|302391465|ref|YP_003827285.1| DNA repair protein RecO [Acetohalobium arabaticum DSM 5501] gi|302203542|gb|ADL12220.1| DNA repair protein RecO [Acetohalobium arabaticum DSM 5501] Length = 251 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 10/183 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++ +AI+L E + I+ + TRQ+G+ + + + AG++ + L Sbjct: 4 YKTEAIVLKYYELKEADKIIVLYTRQHGKVQAVANGARKTKSR---LAGSVELFTYSDFL 60 Query: 63 ---AQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 ++L + E++ S + Y + + F + E L+ +L L Sbjct: 61 LYQGKSLSTISQTEIINSFASLRDDLFKMAYASYVVEVVNEFTVDEEKNEPLFALLLATL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGAVCRSV 175 + EL LL +G+ L CV D + S K GG VC Sbjct: 121 YMLDRGEELELATRFFELRLLNLLGYRPQLDACVDCDLDLAKIDKVKFSSKLGGVVCADC 180 Query: 176 GLP 178 L Sbjct: 181 ALE 183 >gi|228902821|ref|ZP_04066966.1| DNA repair protein recO [Bacillus thuringiensis IBL 4222] gi|228967363|ref|ZP_04128398.1| DNA repair protein recO [Bacillus thuringiensis serovar sotto str. T04001] gi|228792398|gb|EEM39965.1| DNA repair protein recO [Bacillus thuringiensis serovar sotto str. T04001] gi|228856830|gb|EEN01345.1| DNA repair protein recO [Bacillus thuringiensis IBL 4222] Length = 252 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKISAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 65 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 123 LHYMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 182 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 183 QDPYRIPVGEAVHKLLRL 200 >gi|218899464|ref|YP_002447875.1| recombination protein O [Bacillus cereus G9842] gi|226737855|sp|B7IYE9|RECO_BACC2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218545290|gb|ACK97684.1| recombination protein O [Bacillus cereus G9842] Length = 248 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKISAMARGAKKPKSRLASVSQLMTHGHFLI 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 61 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 119 LHYMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 178 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 179 QDPYRIPVGEAVHKLLRL 196 >gi|75761899|ref|ZP_00741824.1| DNA repair protein recO [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490607|gb|EAO53898.1| DNA repair protein recO [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 257 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 10 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKISAMARGAKKPKSRLASVSQLMTHGHFLI 69 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 70 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 127 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 128 LHYMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 187 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 188 QDPYRIPVGEAVHKLLRL 205 >gi|332365387|gb|EGJ43150.1| recombination protein O [Streptococcus sanguinis SK1059] Length = 257 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + +P L+ L L Sbjct: 63 -NDDGLSYIE-DYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 EMMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|77457223|ref|YP_346728.1| DNA repair protein RecO [Pseudomonas fluorescens Pf0-1] gi|92087032|sp|Q3KHL7|RECO_PSEPF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|77381226|gb|ABA72739.1| DNA repair protein [Pseudomonas fluorescens Pf0-1] Length = 229 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 7/145 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R + + Sbjct: 10 PAYVLHSRAYRETSALVDFLTPQ-GRLRAVLRSARGKAGT-LARPFVPLEVEFRGKGELK 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + + A + GL L R LP +P ++D L Sbjct: 68 NVG--RMESVGN--ATWMVGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEG 123 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLT 149 + + E LL ++G+G L Sbjct: 124 RPLEPLLRSFEWRLLDDLGYGFSLN 148 >gi|126667177|ref|ZP_01738151.1| DNA repair protein RecO [Marinobacter sp. ELB17] gi|126628333|gb|EAZ98956.1| DNA repair protein RecO [Marinobacter sp. ELB17] Length = 239 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 11/156 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 Q+ ++ R + E ++ ++V T YGR R + + ++ LQ+ + ++W R Sbjct: 7 QEPGYVIHRRPWRETSLQVDVFTLNYGRVDLIARGASTSKSPLKAQLQSFQPLLLDWVGR 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 G ++ A +L+ S L+ G L R LP +P L+ + Sbjct: 67 G----GLKTLTQVDVRHAPVLAQSQALFSGFYLNELLQRILPAADPYPLLFAAYLDAMAE 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGF----GLDLTKCV 152 + + + + E L +G+ L C Sbjct: 123 LAAAAELEPVLRRFERSLALALGYDFAWDLATDSCA 158 >gi|327468022|gb|EGF13512.1| recombination protein O [Streptococcus sanguinis SK330] Length = 257 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHASKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + + ++ LF+ S L + + L+ L L Sbjct: 63 -NDDGLSYIK-DYQNVVTYHRINEDLFIMAYASYVAALADASLQDNQSDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|294626961|ref|ZP_06705552.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598821|gb|EFF42967.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 240 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVNWRS 60 + +L VR++ E ++++EV+T Q+GR R Q R ++ LQ L++ + Sbjct: 5 HERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQFSAVQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L + R + A L+ L G L R P +P ELY + Sbjct: 65 RGE--LAQLR-QAEALDTAPRLAGDTMLAGFYISELLLRLAPRNDPVPELYACYAQVRSH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +LK +GF DL Sbjct: 122 LASDLPLAWGLRRFERDVLKGLGFAFDL 149 >gi|319941432|ref|ZP_08015760.1| hypothetical protein HMPREF9464_00979 [Sutterella wadsworthensis 3_1_45B] gi|319805052|gb|EFW01882.1| hypothetical protein HMPREF9464_00979 [Sutterella wadsworthensis 3_1_45B] Length = 366 Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 7/147 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 +L R + E +++++V+T +GR R + ++ +L + + + W + + Sbjct: 125 GFVLHARPWSESSMVVDVLTAHFGRVFLVARGAKRPGSNLRGLLTPFSPLALTWTGK-KE 183 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--K 122 + E L + A L L G + R + L+ L+ + Sbjct: 184 AKVLTQAEWLGALAA--LRDEALLSGFYVNELVLRLTEREDVHPGLFQSYVHVLSALADE 241 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLT 149 P+V E LL + G+GL L Sbjct: 242 DPAVRQTGLRSFEAELLAHCGWGLALE 268 >gi|328954021|ref|YP_004371355.1| DNA repair protein recO [Desulfobacca acetoxidans DSM 11109] gi|328454345|gb|AEB10174.1| DNA repair protein recO [Desulfobacca acetoxidans DSM 11109] Length = 265 Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 72/193 (37%), Gaps = 17/193 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRSRLAQ 64 A+IL + YGE + ++ +T GR ++ + + + L+ +LV+ + ++ Sbjct: 8 ALILKTQDYGEADRLVVFLTPDEGRVTALAKHARKSKRRFANCLEPFSLVQAIYTAKPNL 67 Query: 65 NLGEF-RFEVLESHCA--KLLSSSLFLYGLQ----SIVPLFRFLPEREPCLELYDMLNIF 117 L R E++E+ + L + L IV L E L+ L Sbjct: 68 ELARLDRGELVEAFPELRRSLDTLAAAACLTETAMEIVGAIDNLAE------LFAALQSS 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD-LLWVSPKSGGAVCRSV- 175 L + + LL G+G C V D L+W S GG VC S Sbjct: 122 LTHLATGLPSWSLLCSYLIRLLALAGYGPSWQTCQVCRRNTDGLVWFSLNKGGIVCSSCL 181 Query: 176 GLPYAEKMLVLPS 188 G E++ L Sbjct: 182 GQSQGERLYPLHP 194 >gi|261401395|ref|ZP_05987520.1| DNA repair protein RecO [Neisseria lactamica ATCC 23970] gi|269208616|gb|EEZ75071.1| DNA repair protein RecO [Neisseria lactamica ATCC 23970] Length = 263 Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 79/229 (34%), Gaps = 24/229 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V V+W Sbjct: 8 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWVGGWRQPQGRALFGGLYVNELVLKLTAREDPVPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGG-AVC 172 + + + E LL +G DL + G V P++ V Sbjct: 119 EVMEAVCCKAAYIGDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVG 178 Query: 173 RSVGLPYAEKMLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + +P + P + SL+ A ++T F+ ++ L Sbjct: 179 KGFAVPPHAAGVTAPGQSLIDLRAGSFGSGQSLQDALKITRLFI-RHLL 226 >gi|325208739|gb|ADZ04191.1| DNA repair protein RecO [Neisseria meningitidis NZ-05/33] Length = 264 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L + V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 180 RDTDALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 227 >gi|229129575|ref|ZP_04258545.1| DNA repair protein recO [Bacillus cereus BDRD-Cer4] gi|229152498|ref|ZP_04280690.1| DNA repair protein recO [Bacillus cereus m1550] gi|228631106|gb|EEK87743.1| DNA repair protein recO [Bacillus cereus m1550] gi|228653892|gb|EEL09760.1| DNA repair protein recO [Bacillus cereus BDRD-Cer4] Length = 252 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGSKKPKSRLASVSQLMTHGHFLI 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 65 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 123 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 182 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 183 QDPYRIPVGEAVHKLLRL 200 >gi|30022376|ref|NP_834007.1| DNA repair protein RecO [Bacillus cereus ATCC 14579] gi|218231111|ref|YP_002369105.1| DNA repair protein RecO [Bacillus cereus B4264] gi|42559457|sp|Q818G3|RECO_BACCR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737856|sp|B7HCS2|RECO_BACC4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|29897934|gb|AAP11208.1| DNA repair protein recO [Bacillus cereus ATCC 14579] gi|218159068|gb|ACK59060.1| recombination protein O [Bacillus cereus B4264] Length = 248 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGSKKPKSRLASVSQLMTHGHFLI 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 61 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 119 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 178 Query: 178 --PYA-------EKMLVL 186 PY K+L L Sbjct: 179 QDPYRIPVGEAVHKLLRL 196 >gi|269836984|ref|YP_003319212.1| DNA repair protein RecO [Sphaerobacter thermophilus DSM 20745] gi|269786247|gb|ACZ38390.1| DNA repair protein RecO [Sphaerobacter thermophilus DSM 20745] Length = 276 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 8/190 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++ +A++L R GE + IL + T ++G+ + + ++ L+ + + Sbjct: 33 YRTEAVVLRRRDLGEADRILTLFTARHGKLRVVAKGVRRPQSKLAGHLEPCARTSLLLAQ 92 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + ++++ + A + Y L E +P YD L Sbjct: 93 GRNLDII--TQAQLVKPYRALRENEISIAYAGYFADLLDALTVEAQPNPAAYDALVSAFE 150 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL--WVSPKSGGAVCRSVGL 177 I EL LL GF +L +C G T + + S ++GG +C Sbjct: 151 MLDRGLDPFVIARIFELHLLTVTGFRPELYRCAGCGETLEPVVNAFSAEAGGVLCPVCRQ 210 Query: 178 PYAEKMLVLP 187 + L LP Sbjct: 211 A-QPQALPLP 219 >gi|325202743|gb|ADY98197.1| DNA repair protein RecO [Neisseria meningitidis M01-240149] Length = 263 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L + V +W Sbjct: 8 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 119 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 179 RDTDALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 226 >gi|253700038|ref|YP_003021227.1| DNA repair protein RecO [Geobacter sp. M21] gi|251774888|gb|ACT17469.1| DNA repair protein RecO [Geobacter sp. M21] Length = 217 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 5/167 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L + +GE + I+ T + G+ G R + + + L+A +++ L Sbjct: 12 EAIVLRLTDFGEADRIVTFFTLEQGKLQGVARGAKRSKKRFAGALEAFAHLKLQLH--LG 69 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCHK 122 +L + S + S + + L L P+ EP L+ +L +L Sbjct: 70 NSLPTLSSADIVSIFPGIRSDLVKIGSAAYACELVERLTPDEEPAPRLFRLLYCYLERLD 129 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + LLK +G+ DL ++ T LL ++ ++G Sbjct: 130 QDPPSASDRRFFAVNLLKILGYQPDLKVRGISEETARLLALAMQTGR 176 >gi|237798715|ref|ZP_04587176.1| DNA repair protein RecO [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806148|ref|ZP_04592852.1| DNA repair protein RecO [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021568|gb|EGI01625.1| DNA repair protein RecO [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027261|gb|EGI07316.1| DNA repair protein RecO [Pseudomonas syringae pv. oryzae str. 1_6] Length = 227 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P ++D L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFDHYAATLIALALG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|213965771|ref|ZP_03393963.1| DNA repair protein RecO [Corynebacterium amycolatum SK46] gi|213951530|gb|EEB62920.1| DNA repair protein RecO [Corynebacterium amycolatum SK46] Length = 249 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 22/192 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------SHRMQPILQAGNLVRV 56 ++D A+++ GE + I+ + TR +G G + + R+ P + V + Sbjct: 5 YRDRALVVRRYDLGEADRIIVLFTRDHGLVRGVAKGVRRAKSRFGSRLSPFVDV--NVNI 62 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER------EPCLEL 110 R L+ + + + A L+ + ER P EL Sbjct: 63 YPRRGLST---IAGADTVRTWAAPLVDDYAR---YTCACAVLDV-AERIVGEEQVPAPEL 115 Query: 111 YDMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 +D+ L+ + + L + G+ L +C G SP GG Sbjct: 116 WDLATQSLDDIAARRHRPDLLLTSYILRAMAQAGWQPSLFECAGCGKAGPHHAFSPALGG 175 Query: 170 AVCRSVGLPYAE 181 AVC + P A+ Sbjct: 176 AVCTNCRPPGAD 187 >gi|330811508|ref|YP_004355970.1| DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379616|gb|AEA70966.1| DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 229 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 7/144 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-QN 65 A +L R+Y E + +++ +T Q GR +R + + + + V +R R +N Sbjct: 11 AYVLHSRAYRESSALVDFLTPQ-GRLRAVLRGARGKAGT-LARPFVPLEVEFRGRGELKN 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G R E + A L+ GL L R LP +P ++D L Sbjct: 69 VG--RME--SNGVAAWLNGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGR 124 Query: 126 VIGKIFVQIELMLLKNIGFGLDLT 149 + + E LL ++G+G L Sbjct: 125 PLEPLLRSFEWRLLDDLGYGFALN 148 >gi|330722062|gb|EGG99980.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC2047] Length = 234 Score = 72.1 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 5/141 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A +L R Y E ++I++ + GR VR + + +LQ + ++W + Sbjct: 9 QAYVLHTRHYRETSLIVDFLVPDVGRISAVVRGARRPKSPQRSLLQPFGRLLISWYGKGE 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L + ++ L +LF G+ L R + EPC L+ L + Sbjct: 69 --LKTLKVLESDNQLVGLRGRALF-SGMYLNELLVRLIKAEEPCETLFVNYQQALFELRE 125 Query: 124 PSVIGKIFVQIELMLLKNIGF 144 + + + E LL+ +G+ Sbjct: 126 AESVEPVLRRFERQLLQTLGY 146 >gi|269925917|ref|YP_003322540.1| DNA repair protein RecO [Thermobaculum terrenum ATCC BAA-798] gi|269789577|gb|ACZ41718.1| DNA repair protein RecO [Thermobaculum terrenum ATCC BAA-798] Length = 254 Score = 72.1 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 13/196 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVRVN 57 ++ AI+L +GE L T +G+ + + ++ L+ LV + Sbjct: 6 YKTQAIVLRRFDFGETGRQLIAFTPDFGKISLIAKGTKKPTSKLAGHLEPLTLTQLVVAS 65 Query: 58 WRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R N+ + ++S S + +GL L R + E EP E++ + Sbjct: 66 GR-----NIDTVTQAQTIKSFANVRSDSRVIPFGLIVAELLDRMIAEGEPNREIWALAVD 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRS 174 L + K ++ LL G+ +L C G V + ++ S +GG VCR Sbjct: 121 TLERLNNTNDPWKPVTYFQVRLLILAGYQPELKVCSRCGQDVAPESVYFSLSAGGMVCRE 180 Query: 175 VGLPYAEKMLVLPSFL 190 ++V P+ + Sbjct: 181 CSKGDPTAVVVSPNVI 196 >gi|325203553|gb|ADY99006.1| DNA repair protein RecO [Neisseria meningitidis M01-240355] Length = 263 Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L + V +W Sbjct: 8 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 119 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 179 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 226 >gi|325686323|gb|EGD28353.1| recombination protein O [Streptococcus sanguinis SK72] Length = 257 Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 70/206 (33%), Gaps = 10/206 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 L ++ + ++ + Y L + P L+ L L Sbjct: 63 -NDDGLSYIEDYQDVVTYNRINEDLFIMAYASYVAALADASLQDNHPDPVLFAFLQKTLE 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + E+ +L G L+ C T S K G +C Sbjct: 122 LMNSGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQD 181 Query: 180 AEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 182 ERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|327472025|gb|EGF17464.1| recombination protein O [Streptococcus sanguinis SK408] Length = 257 Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHASKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + ++ LF+ S L + + L+ L L Sbjct: 63 -NDDGLSYIE-DYQNVVTYHRINEDLFIMAYASYVAALADASLQDNQSDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|228987548|ref|ZP_04147667.1| DNA repair protein recO [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772280|gb|EEM20727.1| DNA repair protein recO [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 252 Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 19/219 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 5 MFQKVEGIVIRTIDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 65 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 123 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF-LNK 215 + + +++ +L +F L++ Sbjct: 183 Q-------------DQYRIPVGEAVHKLLRLFYHFDLHR 208 >gi|55820130|ref|YP_138572.1| DNA repair protein RecO [Streptococcus thermophilus LMG 18311] gi|55822019|ref|YP_140460.1| DNA repair protein RecO [Streptococcus thermophilus CNRZ1066] gi|67461284|sp|Q5M209|RECO_STRT1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67461290|sp|Q5M6K1|RECO_STRT2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|55736115|gb|AAV59757.1| DNA repair protein [Streptococcus thermophilus LMG 18311] gi|55738004|gb|AAV61645.1| DNA repair protein [Streptococcus thermophilus CNRZ1066] Length = 257 Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 10/206 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + IL R+Y E + ++++ T+Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGFILFNRNYRENDKLVKIFTKQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTV-ND 63 Query: 64 QNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L + E + + + S Y L ++ + + +L+ L L Sbjct: 64 EGLSFIEDYSQAESFKEITSDIFKLSYATY-LAALT--DAAIADGVVDAQLFAFLEKTLV 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G L+ +CV S K G +C + Sbjct: 121 LMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEED 180 Query: 180 AEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L Q + + L+ Sbjct: 181 ERRSHLDPNVPYLLDRFQGLSFEELR 206 >gi|307243730|ref|ZP_07525870.1| DNA repair protein RecO [Peptostreptococcus stomatis DSM 17678] gi|306492939|gb|EFM64952.1| DNA repair protein RecO [Peptostreptococcus stomatis DSM 17678] Length = 248 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 13/178 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRSRLA 63 I+L Y +K++IL + TR+YG+ + Q + + + Q + N R + Sbjct: 7 QGIVLRAVKYRDKDLILTIFTRKYGKVSAIAKGAQGQKSRFLSASQLFSYNNYNMR-KQK 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL----N 119 ++ + ++S + F Y I + + E +P L+++L L Sbjct: 66 DMFTLYQADNIKSFYNISMDFESFSYASFIIKLVEANIVEGQPNNRLFELLAQTLFLYSE 125 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW--VSPKSGGAVCRSV 175 +++ F+ L + +G+ L +C + G ++L + S + GG VC + Sbjct: 126 KIDNKNLVLDAFL---LKFVDYMGYRPQLDRCTICG-NKNLKYAVFSVEDGGLVCNNC 179 >gi|57234637|ref|YP_181322.1| recombination protein RecO [Dehalococcoides ethenogenes 195] gi|92087027|sp|Q3Z8X7|RECO_DEHE1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|57225085|gb|AAW40142.1| recombination protein RecO [Dehalococcoides ethenogenes 195] Length = 253 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 71/195 (36%), Gaps = 39/195 (20%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++ AII+ GE + IL ++T G GF ++ + + S+ Sbjct: 6 DFKTRAIIVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTK----------------SK 49 Query: 62 LAQNLGEFRFEVLESHCAKLLS---------------SSLFLYGLQS-IVPLF-RFLPER 104 L+ +L F + + K + SSL L + + L F PE Sbjct: 50 LSGHLELFCYSEVSLARGKAIDTVTGSQTIQSFLNIRSSLQLSAMAFYVCELAFHFSPEE 109 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL--- 161 ++ +L L + E+ LL+ G+ +L +C Q LL Sbjct: 110 SANPAIFQLLLSTLEELDNTTQAELCTKYFEIHLLEMSGYKPELRECANCH--QKLLATT 167 Query: 162 -WVSPKSGGAVCRSV 175 + SP+SGG +C Sbjct: 168 NYFSPESGGIICPDC 182 >gi|330898517|gb|EGH29936.1| DNA repair protein RecO [Pseudomonas syringae pv. japonica str. M301072PT] Length = 209 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALSLG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 GPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|312277442|gb|ADQ62099.1| DNA repair protein recO [Streptococcus thermophilus ND03] Length = 257 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 10/206 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + IL R+Y E + ++++ T+Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGFILFNRNYRENDKLVKIFTKQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTV-ND 63 Query: 64 QNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L + E + + + S Y L ++ + + +L+ L L Sbjct: 64 EGLSFIEDYSQAESFKEITSDIFKLSYATY-LAALT--DAAIADGVVDAQLFAFLEKTLV 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G L+ +CV S K G +C + Sbjct: 121 LMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEED 180 Query: 180 AEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L Q + + L+ Sbjct: 181 ERRSHLDPNVPYLLDRFQGLSFEELR 206 >gi|30264368|ref|NP_846745.1| DNA repair protein RecO [Bacillus anthracis str. Ames] gi|47778304|ref|YP_021168.2| DNA repair protein RecO [Bacillus anthracis str. 'Ames Ancestor'] gi|49187194|ref|YP_030446.1| DNA repair protein RecO [Bacillus anthracis str. Sterne] gi|49481310|ref|YP_038354.1| DNA repair protein RecO [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141205|ref|YP_085625.1| DNA repair protein RecO [Bacillus cereus E33L] gi|165872031|ref|ZP_02216671.1| recombination protein O [Bacillus anthracis str. A0488] gi|167634555|ref|ZP_02392875.1| recombination protein O [Bacillus anthracis str. A0442] gi|167638589|ref|ZP_02396865.1| recombination protein O [Bacillus anthracis str. A0193] gi|170687502|ref|ZP_02878719.1| recombination protein O [Bacillus anthracis str. A0465] gi|170707433|ref|ZP_02897887.1| recombination protein O [Bacillus anthracis str. A0389] gi|177653249|ref|ZP_02935501.1| recombination protein O [Bacillus anthracis str. A0174] gi|190566916|ref|ZP_03019832.1| recombination protein O [Bacillus anthracis Tsiankovskii-I] gi|196039289|ref|ZP_03106595.1| recombination protein O [Bacillus cereus NVH0597-99] gi|196046321|ref|ZP_03113547.1| recombination protein O [Bacillus cereus 03BB108] gi|217961788|ref|YP_002340358.1| DNA repair protein RecO [Bacillus cereus AH187] gi|218905435|ref|YP_002453269.1| recombination protein O [Bacillus cereus AH820] gi|225866279|ref|YP_002751657.1| DNA repair protein RecO [Bacillus cereus 03BB102] gi|227817074|ref|YP_002817083.1| DNA repair protein RecO [Bacillus anthracis str. CDC 684] gi|229603091|ref|YP_002868587.1| DNA repair protein RecO [Bacillus anthracis str. A0248] gi|254684055|ref|ZP_05147915.1| DNA repair protein RecO [Bacillus anthracis str. CNEVA-9066] gi|254721889|ref|ZP_05183678.1| DNA repair protein RecO [Bacillus anthracis str. A1055] gi|254736403|ref|ZP_05194109.1| DNA repair protein RecO [Bacillus anthracis str. Western North America USA6153] gi|254741441|ref|ZP_05199128.1| DNA repair protein RecO [Bacillus anthracis str. Kruger B] gi|254750879|ref|ZP_05202918.1| DNA repair protein RecO [Bacillus anthracis str. Vollum] gi|254757793|ref|ZP_05209820.1| DNA repair protein RecO [Bacillus anthracis str. Australia 94] gi|301055791|ref|YP_003794002.1| DNA repair protein RecO [Bacillus anthracis CI] gi|42559458|sp|Q81LT9|RECO_BACAN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61214838|sp|Q634P2|RECO_BACCZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61215015|sp|Q6HDM2|RECO_BACHK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737854|sp|B7JN23|RECO_BACC0 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737857|sp|B7HPJ7|RECO_BACC7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790509|sp|C3P8K4|RECO_BACAA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790510|sp|C3L5Q1|RECO_BACAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790511|sp|C1ESJ2|RECO_BACC3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|30259026|gb|AAP28231.1| DNA repair protein RecO [Bacillus anthracis str. Ames] gi|47552009|gb|AAT33643.2| recombination protein O [Bacillus anthracis str. 'Ames Ancestor'] gi|49181121|gb|AAT56497.1| recombination protein O [Bacillus anthracis str. Sterne] gi|49332866|gb|AAT63512.1| recombination protein O (DNA repair protein) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974674|gb|AAU16224.1| recombination protein O (DNA repair protein O) [Bacillus cereus E33L] gi|164712162|gb|EDR17699.1| recombination protein O [Bacillus anthracis str. A0488] gi|167513437|gb|EDR88807.1| recombination protein O [Bacillus anthracis str. A0193] gi|167530007|gb|EDR92742.1| recombination protein O [Bacillus anthracis str. A0442] gi|170127677|gb|EDS96550.1| recombination protein O [Bacillus anthracis str. A0389] gi|170668697|gb|EDT19443.1| recombination protein O [Bacillus anthracis str. A0465] gi|172081531|gb|EDT66603.1| recombination protein O [Bacillus anthracis str. A0174] gi|190561907|gb|EDV15876.1| recombination protein O [Bacillus anthracis Tsiankovskii-I] gi|196022791|gb|EDX61472.1| recombination protein O [Bacillus cereus 03BB108] gi|196029916|gb|EDX68517.1| recombination protein O [Bacillus cereus NVH0597-99] gi|217063057|gb|ACJ77307.1| recombination protein O [Bacillus cereus AH187] gi|218539840|gb|ACK92238.1| recombination protein O [Bacillus cereus AH820] gi|225789516|gb|ACO29733.1| DNA repair protein RecO [Bacillus cereus 03BB102] gi|227007270|gb|ACP17013.1| DNA repair protein RecO [Bacillus anthracis str. CDC 684] gi|229267499|gb|ACQ49136.1| DNA repair protein RecO [Bacillus anthracis str. A0248] gi|300377960|gb|ADK06864.1| DNA repair protein RecO [Bacillus cereus biovar anthracis str. CI] gi|324328202|gb|ADY23462.1| DNA repair protein RecO [Bacillus thuringiensis serovar finitimus YBT-020] Length = 248 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 19/219 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 61 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 119 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 178 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF-LNK 215 + + +++ +L +F L++ Sbjct: 179 Q-------------DQYRIPVGEAVHKLLRLFYHFDLHR 204 >gi|65321671|ref|ZP_00394630.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Bacillus anthracis str. A2012] gi|228916930|ref|ZP_04080492.1| DNA repair protein recO [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929341|ref|ZP_04092366.1| DNA repair protein recO [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935618|ref|ZP_04098433.1| DNA repair protein recO [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948011|ref|ZP_04110297.1| DNA repair protein recO [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093367|ref|ZP_04224474.1| DNA repair protein recO [Bacillus cereus Rock3-42] gi|229123836|ref|ZP_04253030.1| DNA repair protein recO [Bacillus cereus 95/8201] gi|229141035|ref|ZP_04269578.1| DNA repair protein recO [Bacillus cereus BDRD-ST26] gi|229157912|ref|ZP_04285986.1| DNA repair protein recO [Bacillus cereus ATCC 4342] gi|229163243|ref|ZP_04291198.1| DNA repair protein recO [Bacillus cereus R309803] gi|229186537|ref|ZP_04313699.1| DNA repair protein recO [Bacillus cereus BGSC 6E1] gi|229198424|ref|ZP_04325130.1| DNA repair protein recO [Bacillus cereus m1293] gi|228585124|gb|EEK43236.1| DNA repair protein recO [Bacillus cereus m1293] gi|228596968|gb|EEK54626.1| DNA repair protein recO [Bacillus cereus BGSC 6E1] gi|228620306|gb|EEK77177.1| DNA repair protein recO [Bacillus cereus R309803] gi|228625571|gb|EEK82324.1| DNA repair protein recO [Bacillus cereus ATCC 4342] gi|228642468|gb|EEK98756.1| DNA repair protein recO [Bacillus cereus BDRD-ST26] gi|228659657|gb|EEL15303.1| DNA repair protein recO [Bacillus cereus 95/8201] gi|228690023|gb|EEL43824.1| DNA repair protein recO [Bacillus cereus Rock3-42] gi|228811701|gb|EEM58036.1| DNA repair protein recO [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824058|gb|EEM69875.1| DNA repair protein recO [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830355|gb|EEM75967.1| DNA repair protein recO [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842754|gb|EEM87840.1| DNA repair protein recO [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 252 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 19/219 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 65 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 123 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF-LNK 215 + + +++ +L +F L++ Sbjct: 183 Q-------------DQYRIPVGEAVHKLLRLFYHFDLHR 208 >gi|47567862|ref|ZP_00238570.1| DNA repair protein RecO [Bacillus cereus G9241] gi|118479468|ref|YP_896619.1| DNA repair protein RecO [Bacillus thuringiensis str. Al Hakam] gi|222097743|ref|YP_002531800.1| DNA repair protein reco [Bacillus cereus Q1] gi|47555539|gb|EAL13882.1| DNA repair protein RecO [Bacillus cereus G9241] gi|118418693|gb|ABK87112.1| DNA replication and repair protein RecO [Bacillus thuringiensis str. Al Hakam] gi|221241801|gb|ACM14511.1| recombination protein O [Bacillus cereus Q1] Length = 257 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 19/219 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 10 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 69 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S ++ L Y + + +++ L++ML Sbjct: 70 Q--MGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQT 127 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 128 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 187 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF-LNK 215 + + +++ +L +F L++ Sbjct: 188 Q-------------DQYRIPVGEAVHKLLRLFYHFDLHR 213 >gi|313667834|ref|YP_004048118.1| DNA repair protein (recombination protein o) [Neisseria lactamica ST-640] gi|313005296|emb|CBN86729.1| DNA repair protein (recombination protein o) [Neisseria lactamica 020-06] Length = 263 Score = 71.7 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 79/229 (34%), Gaps = 24/229 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 8 HEPVFMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWVGGWRQPQGRALFGGLYVNELVLKLTAREDPVPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGG-AVC 172 + + + E LL +G DL + G V P++ V Sbjct: 119 EVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVG 178 Query: 173 RSVGLPYAEKMLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + +P +V P + SL+ A ++T F+ ++ L Sbjct: 179 KGFAVPPHAAGVVAPGQSLIDLRAGSFGSGQSLQDALKITRLFI-RHLL 226 >gi|228476695|ref|ZP_04061364.1| DNA repair protein RecO [Streptococcus salivarius SK126] gi|228251644|gb|EEK10741.1| DNA repair protein RecO [Streptococcus salivarius SK126] Length = 257 Score = 71.7 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 78/207 (37%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 + ++L R+Y E + ++++ T Q G+ + FVR G S ++ ++Q L + + Sbjct: 5 ESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGSGKLSAVIQP--LTIAEFMMTVN 62 Query: 63 AQNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L + E + + + S Y L S+ + + +L+ L L Sbjct: 63 DEGLSFIEDYSQAESFKEITSDIFKLSYATY-LASLT--DAAIADGVADAQLFAFLEKTL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + E+ +L G L+ +CV S K G +C + Sbjct: 120 ELMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYAE 179 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L Q + + L+ Sbjct: 180 DERRSHLNPNVPYLLDRFQGLSFEELR 206 >gi|148995010|ref|ZP_01823970.1| DNA repair protein RecO [Streptococcus pneumoniae SP9-BS68] gi|168489499|ref|ZP_02713698.1| DNA repair protein RecO [Streptococcus pneumoniae SP195] gi|147926892|gb|EDK77940.1| DNA repair protein RecO [Streptococcus pneumoniae SP9-BS68] gi|183572045|gb|EDT92573.1| DNA repair protein RecO [Streptococcus pneumoniae SP195] gi|332075692|gb|EGI86159.1| DNA repair protein RecO [Streptococcus pneumoniae GA17570] Length = 256 Score = 71.7 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 76/205 (37%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQNLTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDK 182 Query: 181 EKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q ID ++L+ Sbjct: 183 RRCHLNPNIPYLLNQFQAIDFETLE 207 >gi|325198870|gb|ADY94326.1| DNA repair protein RecO [Neisseria meningitidis G2136] Length = 248 Score = 71.7 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 32/233 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L + V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 + A+ G + L+ +E A+SL+ A ++T F+ ++ L Sbjct: 180 RDTDALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKITRLFI-RHLL 227 >gi|225867639|ref|YP_002743587.1| DNA repair protein RecO [Streptococcus equi subsp. zooepidemicus] gi|225700915|emb|CAW97592.1| DNA repair protein RecO [Streptococcus equi subsp. zooepidemicus] Length = 256 Score = 71.7 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 11/210 (5%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L ++Y E + ++++ T G+ + FV++ ++ P++Q + Sbjct: 1 MRIQRSLGIVLYNKNYREDDKLVKIFTEAAGKRMFFVKHIGRSKLAPVVQPLTAADFLLK 60 Query: 60 SRLAQNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 +L + E S Y L +P+ EP L+ L Sbjct: 61 I-NDSSLSYIEDYNQVEAYRHINEDFFRLSYASYVLALA---DAAIPDNEPDPHLFAFLK 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + +E+ +L G ++ CV T S K G +C Sbjct: 117 KTLDLMEEGLDYDILTNILEIQILDRFGVRMNFHDCVFCHRTNLPFDFSHKYSGVLCPQH 176 Query: 176 GLPYAEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L QTI+ D L+ Sbjct: 177 YHEDEGRYGLDPNVIYLLNRFQTINIDELR 206 >gi|319440589|ref|ZP_07989745.1| DNA repair protein RecO [Corynebacterium variabile DSM 44702] Length = 257 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 14/191 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW- 58 ++D+A ++ GE + I+ ++TR +G G + + + + L V V Sbjct: 5 NYRDEAFVVRTHDLGEADQIIVLLTRHHGIVRGVAKGVRRTKSRFGARLDRFCRVDVLIY 64 Query: 59 ----RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRF-----LPEREPCL 108 R+++ L + ++ +++ Y +++ + E E Sbjct: 65 PGRNRAKIDGGLATLSDTAAVRTYAPPIVADVDRYYAAVAMLEIAELTVRGDYGEGEDAT 124 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 ++D+L+ L + + + ++ L +L+ G+ L C G P + Sbjct: 125 RIFDLLDAALGDLGVSPLPPRTQADRLVLQVLEVAGWAPSLVDCAQCGARGPHRAFHPHA 184 Query: 168 GGAVCRSVGLP 178 GGAVC P Sbjct: 185 GGAVCVRCRPP 195 >gi|213420940|ref|ZP_03354006.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 222 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 22 LEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCA 79 L+V T + GR + +S R ++ LQ + + + R EV A Sbjct: 2 LDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLRYSGR---------GEVKTLRSA 52 Query: 80 KLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY-DMLNIFLNCHKIPSVIGKIFV 132 + +S +L L G+ L+ R L EL+ D LN Sbjct: 53 EAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQALAGTTGSPEPALR 112 Query: 133 QIELMLLKNIGFGLDLTKCVVTGVTQD 159 + EL LL ++G+G++ T C +G D Sbjct: 113 RFELALLGHLGYGVNFTHCAGSGERVD 139 >gi|330950054|gb|EGH50314.1| DNA repair protein RecO [Pseudomonas syringae Cit 7] Length = 227 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALSLG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|227546836|ref|ZP_03976885.1| recombinational DNA repair protein (RecF pathway) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|317481606|ref|ZP_07940642.1| recombination protein O [Bifidobacterium sp. 12_1_47BFAA] gi|322691535|ref|YP_004221105.1| DNA repair protein RecO [Bifidobacterium longum subsp. longum JCM 1217] gi|227212798|gb|EEI80679.1| recombinational DNA repair protein (RecF pathway) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|316916966|gb|EFV38352.1| recombination protein O [Bifidobacterium sp. 12_1_47BFAA] gi|320456391|dbj|BAJ67013.1| DNA repair protein RecO [Bifidobacterium longum subsp. longum JCM 1217] Length = 239 Score = 71.3 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 9/190 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVLIAE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIF 117 R + E + ++ A + + IV L E E Y +L Sbjct: 64 GRSLD--VVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKLASTEHEQLPNQYRLLIGA 121 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 LN S + + L G+ L CVV G + ++S SGG +C + Sbjct: 122 LNALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAE-PAYLSIASGGVMCEADH 180 Query: 177 LPYAEKMLVL 186 A ++ Sbjct: 181 TTDARRIAPF 190 >gi|25028739|ref|NP_738793.1| DNA repair protein RecO [Corynebacterium efficiens YS-314] gi|259507800|ref|ZP_05750700.1| DNA repair protein RecO [Corynebacterium efficiens YS-314] gi|23494025|dbj|BAC18993.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164593|gb|EEW49147.1| DNA repair protein RecO [Corynebacterium efficiens YS-314] Length = 242 Score = 71.3 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 66/174 (37%), Gaps = 7/174 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 ++D A+++ +GE + I+ ++TR +G G + + + + LQ + V + Sbjct: 6 YRDRALVVRTHDFGEADRIVVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYP 65 Query: 60 SRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R NL + + + + ++ +I+ + + E L+D L Sbjct: 66 GR---NLSTISGADTVGYYASGIIDDFKRYSAASAILEIASSIAPMEQGPYLFDATTAAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + + L + + G+ L C G P +GGAVC Sbjct: 123 QRMQNAEHPVLLLDEYMLRAMDHAGWAPSLFDCAQCGRPGPHTAFHPGAGGAVC 176 >gi|324995748|gb|EGC27659.1| recombination protein O [Streptococcus sanguinis SK678] gi|327460128|gb|EGF06467.1| recombination protein O [Streptococcus sanguinis SK1] Length = 257 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q NL+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHASKSKLAPVIQPLTAANLLMKI--- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFL 118 L + ++ LF+ S L + + L+ L L Sbjct: 63 -NDDGLSYIE-DYQNVVTYHRINEDLFIMAYASYVAALADASLQDNQSDPALFAFLQKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L G L+ C T S K G +C Sbjct: 121 ELMNNGLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQ 180 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P FL + Q + L+ Sbjct: 181 DERRCHLNPNLPFLLDQFQAVRFSELE 207 >gi|254284014|ref|ZP_04958982.1| DNA repair protein RecO [gamma proteobacterium NOR51-B] gi|219680217|gb|EED36566.1| DNA repair protein RecO [gamma proteobacterium NOR51-B] Length = 246 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 11/154 (7%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRN----GQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L RSYG+ ++LEV T + GR + + +LQ + + LA Sbjct: 1 MLHRRSYGDNGLLLEVFTHETGRLSAVAKGVHRRSRGGAKSGLLQPFTPLLIT----LAG 56 Query: 65 NLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 N + +ES A L + L L R LP+ +P +L+ L K Sbjct: 57 NSDLKQLRQIESAGANLRLDREAMISALYVNELLVRLLPKFDPQPQLFADYGSSLQDMKA 116 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + E LL+ +G+ +L+ C V G + Sbjct: 117 GG-NEPVLRRFEWRLLEALGYQPNLS-CDVLGES 148 >gi|56459916|ref|YP_155197.1| recombinational DNA repair protein RecO, RecF pathway [Idiomarina loihiensis L2TR] gi|61214745|sp|Q5R108|RECO_IDILO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56178926|gb|AAV81648.1| Recombinational DNA repair protein RecO, RecF pathway [Idiomarina loihiensis L2TR] Length = 234 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 8/168 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 A++L Y E ++IL++ T GR + + + + + Q + ++ R Sbjct: 5 ALVLHRWDYQETSLILDLFTEDKGRVRVVAKGAKRPKSPWRGLAQPFMPLLAEFQGRSD- 63 Query: 65 NLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L E ++ LL G + R +P EL++ L Sbjct: 64 -LKTLTLLEPQQTTQKLLLQGDKLYSGFYLNELIQRLVPTEAEAPELFESYLSALQNMTN 122 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSG 168 + Q E LL+++G D TG + P G Sbjct: 123 SERVEPALRQFEWQLLQHLGAAFDWHYDADTGNVLSDSKWCYFIPDHG 170 >gi|283779528|ref|YP_003370283.1| DNA repair protein RecO [Pirellula staleyi DSM 6068] gi|283437981|gb|ADB16423.1| DNA repair protein RecO [Pirellula staleyi DSM 6068] Length = 251 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 56/156 (35%), Gaps = 11/156 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR----- 61 AI+L V + E +++ + T +G+ + + P N + + +R Sbjct: 8 AIVLRVVDFSETSVVTTLFTEHFGKVSALAKGAR-RPKGPF---ENAIDLLAVARIVFIR 63 Query: 62 -LAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L LE S LY G L +P EL+ N L Sbjct: 64 KSSDALDLLTEAKLERRFRSAERSLERLYAGFYLAELLTEMTDTGDPHPELFHASNRVLA 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 S + + IEL L+++G LT+C + G Sbjct: 124 ELDAGSPVAPLVAGIELFALRDLGHLPLLTECAICG 159 >gi|114775463|ref|ZP_01451031.1| DNA repair protein RecO [Mariprofundus ferrooxydans PV-1] gi|114553574|gb|EAU55955.1| DNA repair protein RecO [Mariprofundus ferrooxydans PV-1] Length = 228 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 15/159 (9%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 DD ++L + E ++I ++T +GR R + + + L + + WR Sbjct: 3 EISDDGLLLRRIPFSETSLICHILTAGHGRITVMARGARRPKSIFRATLAPLYRLHITWR 62 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNI 116 R +G S +L+ S L L+ I + +P EL++ L++ Sbjct: 63 PGR--SGMGTLT---DISRGEQLVDESRMLPALELIAVSSTLFQDGDPHGYHELHEALSL 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + H +++ +L+ G+ DL+ C + G Sbjct: 118 LADRHADEGQCAALWL-----MLERAGWLGDLSHCWLCG 151 >gi|289676658|ref|ZP_06497548.1| DNA repair protein RecO [Pseudomonas syringae pv. syringae FF5] gi|302186919|ref|ZP_07263592.1| DNA repair protein RecO [Pseudomonas syringae pv. syringae 642] Length = 227 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALSLG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|70728455|ref|YP_258204.1| DNA repair protein RecO [Pseudomonas fluorescens Pf-5] gi|92087031|sp|Q4KHS9|RECO_PSEF5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|68342754|gb|AAY90360.1| DNA repair protein RecO [Pseudomonas fluorescens Pf-5] Length = 229 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 7/145 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-QN 65 A +L R+Y E + +++ +T Q GR +RN + + + + V +R R +N Sbjct: 11 AYVLHSRAYRESSALVDFLTPQ-GRLRAVLRNARGKAGT-LARPFVPLEVEFRGRGELKN 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G R E + A L+ GL L R LP +P ++D L Sbjct: 69 VG--RME--SAGIAAWLNGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGR 124 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G L Sbjct: 125 PLEPLLRAFEWRLLDDLGYGFALDS 149 >gi|197119173|ref|YP_002139600.1| DNA repair protein RecO [Geobacter bemidjiensis Bem] gi|197088533|gb|ACH39804.1| DNA repair protein RecO [Geobacter bemidjiensis Bem] Length = 217 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 70/204 (34%), Gaps = 27/204 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI------------LQAG 51 + +AI+L +GE + I+ T + G+ G R + + + LQ G Sbjct: 10 EAEAIVLRFTDFGEADRIVTFFTLEQGKLQGVARGAKRSKKRFAGALEQFAHLKLQLQQG 69 Query: 52 NLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLEL 110 N + + + S + + + L L P+ EP L Sbjct: 70 NSLATLSSA------------DIVSIFPGIRGDLVKIGCAAYACELVERLTPDEEPAPRL 117 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG- 169 + +L +L + LLK +G+ DL ++ T LL ++ ++G Sbjct: 118 FRLLYCYLERLNEAPPSPSDRRFFAVNLLKILGYQPDLQVRGISEQTARLLALAMQTGRF 177 Query: 170 -AVCRSVGLPYAEKMLVLPSFLWK 192 A+ +L+ P+ Sbjct: 178 GAISFPEPELREADLLLNPAIDLH 201 >gi|332284934|ref|YP_004416845.1| DNA repair protein RecO [Pusillimonas sp. T7-7] gi|330428887|gb|AEC20221.1| DNA repair protein RecO [Pusillimonas sp. T7-7] Length = 194 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 18/149 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 +L + E ++I++ TR +G + + ++P+L A + ++W Sbjct: 13 GYLLHSAPWRETSLIVQAFTRHHGVVALVAKGAKRPYSVLRPVLSAFQPLALSWSG---- 68 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLNIFL 118 EV A+ + L G + L R LP +P LY+ ++ L Sbjct: 69 -----ANEVKTLTRAESMGIR-KLGGQAYMSAWYMNELLLRLLPREDPHPVLYEAYDVAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 + + E +LL G+G++ Sbjct: 123 QRLALQRSAASALRRFEWILLNETGYGIE 151 >gi|261855984|ref|YP_003263267.1| DNA repair protein RecO [Halothiobacillus neapolitanus c2] gi|261836453|gb|ACX96220.1| DNA repair protein RecO [Halothiobacillus neapolitanus c2] Length = 241 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 12/217 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA--GNLVRVNWRSRLAQ 64 A +L R + + ++++E T +GR + R ++ + L+ + + R Sbjct: 4 AYVLHTRPWRDTSLLVEWFTEDFGRLTTYQRGARNRGKKSPLRPMAFQCLHMMLVGRGD- 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L SL + G L R L +EP L+D+ L P Sbjct: 63 -MKTATQIESAGRAHLLQGQSLAV-GFYLNELLMRALHRQEPAPVLFDIYARHLAELAGP 120 Query: 125 SVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRSVGLPYA 180 SV V+ E LL +G G+D T Q W++P+ G R G P A Sbjct: 121 SVDFGTVVRGFERDLLAELGVGIDWQSTADTQEPIDQQAQYWLAPEEGILQHRGRGYPVA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 +L + + DA + A L L + Sbjct: 181 GNIL---KAIADNQTLADAGDRRQARNLLQSLLAPHV 214 >gi|161870627|ref|YP_001599800.1| DNA repair protein (recombination protein o) [Neisseria meningitidis 053442] gi|161596180|gb|ABX73840.1| DNA repair protein (recombination protein o) [Neisseria meningitidis 053442] Length = 264 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADSTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + A+ G + L+ +E A+SL+ A ++T Sbjct: 180 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 219 >gi|20532233|sp|Q97JI4|RECO_CLOAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|325508710|gb|ADZ20346.1| DNA repair protein RecO [Clostridium acetobutylicum EA 2018] Length = 247 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 66/183 (36%), Gaps = 11/183 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQA---GNLVRVN 57 ++ ++L + E + I+ + T + G+ R + +R + PI GN V Sbjct: 4 FKSRGVVLKSQDINENDKIIWIFTEKMGKISVIARGAKKNRSKYLPITINFCFGNFVFFK 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 +S + N G E+++S L Y + + E E +L+ Sbjct: 64 GKSMFSLNEG----EIIDSFQEFLSDFDTLTYCSYLCELIDISMAEGESNRDLFKEFVST 119 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSV 175 K + + EL LL+ G+ L+L C + ++S K G +C Sbjct: 120 FYLIKNKVGDIETLSRAFELKLLRYTGYNLNLDYCSKCKKRINSASYISYKYYGGICGDC 179 Query: 176 GLP 178 Sbjct: 180 SKE 182 >gi|306832521|ref|ZP_07465661.1| recombination protein O [Streptococcus bovis ATCC 700338] gi|304425279|gb|EFM28405.1| recombination protein O [Streptococcus bovis ATCC 700338] Length = 251 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 74/211 (35%), Gaps = 13/211 (6%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R+Y E + ++++ T G+H+ FV++ R ++Q + + Sbjct: 1 MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTAAKFILK 60 Query: 60 SRLAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDML 114 L E + A L S Y + L +P+ +L+ Sbjct: 61 I-NDTGLSFIEDYKEVESFKEINADLFRLSYASY----VTALADAAVPDGVADPQLFTFF 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 N L+ + + E+ LL+ G L+ +C S K G +C Sbjct: 116 NKTLSLMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRIGLPFDFSHKYSGLLCPE 175 Query: 175 --VGLPYAEKMLVLPSFLWKEEQTIDADSLK 203 Y + +L Q I D LK Sbjct: 176 HYGKDDYRSHLDPNVLYLVDRFQAIHFDELK 206 >gi|332799069|ref|YP_004460568.1| DNA repair protein recO [Tepidanaerobacter sp. Re1] gi|332696804|gb|AEE91261.1| DNA repair protein recO [Tepidanaerobacter sp. Re1] Length = 254 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 16/182 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG-------NLVR 55 ++ DAI+LG R+ GE + IL + + G+ R + PIL AG N + Sbjct: 4 YRTDAIVLGYRNLGEADKILTLFSPDKGKIHAVARGVR-RPRNPIL-AGSQLFSYSNFLI 61 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + R NL + E+ ES + YGL L P + EL+ Sbjct: 62 LEGR-----NLDTISQCEIKESFYKIRQNLESMAYGLYFAELLRVSTPLEDKNQELFRFF 116 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCR 173 + + I + E+ L+ GF +L +CV G D ++ S GG +C Sbjct: 117 LKTMYLLQKWENIEILSRIYEVKLMAIQGFAPELFQCVGCGRKSFDKIYFSTAMGGILCH 176 Query: 174 SV 175 Sbjct: 177 DC 178 >gi|49483814|ref|YP_041038.1| recombination protein O [Staphylococcus aureus subsp. aureus MRSA252] gi|257425691|ref|ZP_05602115.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 55/2053] gi|257428352|ref|ZP_05604750.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 65-1322] gi|257430989|ref|ZP_05607369.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 68-397] gi|257433677|ref|ZP_05610035.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus E1410] gi|257436591|ref|ZP_05612635.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus M876] gi|282904148|ref|ZP_06312036.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C160] gi|282905975|ref|ZP_06313830.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus Btn1260] gi|282908885|ref|ZP_06316703.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus WW2703/97] gi|282914373|ref|ZP_06322159.1| DNA repair protein RecO family protein [Staphylococcus aureus subsp. aureus M899] gi|282919342|ref|ZP_06327077.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C427] gi|282924667|ref|ZP_06332335.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C101] gi|283958330|ref|ZP_06375781.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus A017934/97] gi|293503447|ref|ZP_06667294.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 58-424] gi|293510464|ref|ZP_06669170.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus M809] gi|293531004|ref|ZP_06671686.1| DNA repair protein RecO family protein [Staphylococcus aureus subsp. aureus M1015] gi|295428144|ref|ZP_06820776.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus EMRSA16] gi|56749561|sp|Q6GGD4|RECO_STAAR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49241943|emb|CAG40638.1| putative recombination protein O [Staphylococcus aureus subsp. aureus MRSA252] gi|257271385|gb|EEV03531.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 55/2053] gi|257275193|gb|EEV06680.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 65-1322] gi|257278419|gb|EEV09055.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 68-397] gi|257281770|gb|EEV11907.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus E1410] gi|257283942|gb|EEV14065.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus M876] gi|282313502|gb|EFB43897.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C101] gi|282317152|gb|EFB47526.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C427] gi|282321554|gb|EFB51879.1| DNA repair protein RecO family protein [Staphylococcus aureus subsp. aureus M899] gi|282327149|gb|EFB57444.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331267|gb|EFB60781.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus Btn1260] gi|282595766|gb|EFC00730.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C160] gi|283790479|gb|EFC29296.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus A017934/97] gi|290920272|gb|EFD97338.1| DNA repair protein RecO family protein [Staphylococcus aureus subsp. aureus M1015] gi|291095113|gb|EFE25378.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 58-424] gi|291466828|gb|EFF09348.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus M809] gi|295128502|gb|EFG58136.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus EMRSA16] Length = 250 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ ++G + + ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNKWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDVAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKYDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|330957805|gb|EGH58065.1| DNA repair protein RecO [Pseudomonas syringae pv. maculicola str. ES4326] Length = 227 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 7/145 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T G +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-RGLFRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P ++D L Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFDHYAATLLALASG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLT 149 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMD 146 >gi|257893052|ref|ZP_05672705.1| recombination protein O [Enterococcus faecium 1,231,408] gi|260559559|ref|ZP_05831739.1| recombination protein O [Enterococcus faecium C68] gi|293559429|ref|ZP_06675968.1| DNA repair protein RecO [Enterococcus faecium E1162] gi|314939539|ref|ZP_07846767.1| DNA repair protein RecO [Enterococcus faecium TX0133a04] gi|314942706|ref|ZP_07849532.1| DNA repair protein RecO [Enterococcus faecium TX0133C] gi|314948956|ref|ZP_07852322.1| DNA repair protein RecO [Enterococcus faecium TX0082] gi|314953303|ref|ZP_07856231.1| DNA repair protein RecO [Enterococcus faecium TX0133A] gi|314993383|ref|ZP_07858748.1| DNA repair protein RecO [Enterococcus faecium TX0133B] gi|314995733|ref|ZP_07860822.1| DNA repair protein RecO [Enterococcus faecium TX0133a01] gi|257829431|gb|EEV56038.1| recombination protein O [Enterococcus faecium 1,231,408] gi|260074227|gb|EEW62549.1| recombination protein O [Enterococcus faecium C68] gi|291606643|gb|EFF36038.1| DNA repair protein RecO [Enterococcus faecium E1162] gi|313590005|gb|EFR68850.1| DNA repair protein RecO [Enterococcus faecium TX0133a01] gi|313592048|gb|EFR70893.1| DNA repair protein RecO [Enterococcus faecium TX0133B] gi|313594646|gb|EFR73491.1| DNA repair protein RecO [Enterococcus faecium TX0133A] gi|313598571|gb|EFR77416.1| DNA repair protein RecO [Enterococcus faecium TX0133C] gi|313641175|gb|EFS05755.1| DNA repair protein RecO [Enterococcus faecium TX0133a04] gi|313644615|gb|EFS09195.1| DNA repair protein RecO [Enterococcus faecium TX0082] Length = 270 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 20/182 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ Q+ + P L Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVY----- 60 Query: 62 LAQNLGEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYD 112 +G FR E L + H + + +FL YG + + + + + L+ Sbjct: 61 ----IGNFRSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQ 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I E+ +L+ G T CVV G T+ S KSGG +C Sbjct: 117 FTQQALQRMDQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKSGGVIC 176 Query: 173 RS 174 Sbjct: 177 EK 178 >gi|166712831|ref|ZP_02244038.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzicola BLS256] Length = 240 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRVNWRS 60 + +L VR++ E ++++EV+T Q+GR R + ++ LQ L++ + Sbjct: 5 HERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQFSAVQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L + R + A L L G L R P +P ELY Sbjct: 65 RGE--LAQLR-QAEALDTAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYAQARTH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +L+ +GF DL Sbjct: 122 LAADLPLAWGLRRFERDVLEGLGFAFDL 149 >gi|58581480|ref|YP_200496.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623410|ref|YP_450782.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577280|ref|YP_001914209.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzae PXO99A] gi|67461245|sp|Q5H1R0|RECO_XANOR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361498|sp|Q2P4L9|RECO_XANOM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238689547|sp|B2SRX5|RECO_XANOP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|58426074|gb|AAW75111.1| DNA repair protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367350|dbj|BAE68508.1| DNA repair protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521732|gb|ACD59677.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzae PXO99A] Length = 240 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRVNWRS 60 + +L VR++ E ++++EV+T Q+GR R + ++ LQ L++ + Sbjct: 5 HERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQFSAVQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L + R + A L L G L R P +P ELY Sbjct: 65 RGE--LAQLR-QAEALDTAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYTQARTH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +L+ +GF DL Sbjct: 122 LAADLPLAWGLRRFERDVLEGLGFAFDL 149 >gi|21230732|ref|NP_636649.1| DNA repair protein RecO [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769272|ref|YP_244034.1| DNA repair protein RecO [Xanthomonas campestris pv. campestris str. 8004] gi|188992423|ref|YP_001904433.1| DNA repair protein RecO [Xanthomonas campestris pv. campestris str. B100] gi|42559486|sp|Q8PB50|RECO_XANCP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|81304769|sp|Q4USF9|RECO_XANC8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229485575|sp|B0RX25|RECO_XANCB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|21112326|gb|AAM40573.1| DNA repair protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574604|gb|AAY50014.1| DNA repair protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734183|emb|CAP52391.1| Putative DNA repair protein [Xanthomonas campestris pv. campestris] Length = 241 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 10/150 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRVN--W 58 + +L R++ E ++++EV+T Q+GR R + ++ LQ L++ Sbjct: 5 HERGFVLHARAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQFTAVQ 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R LAQ + E +++ +LL ++ L G L R P P EL+D Sbjct: 65 RGELAQ---LRQAEAIDT-APRLLGEAM-LAGFYISELLLRLAPRHAPVPELFDCYAQAR 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + Q E +L +GFG DL Sbjct: 120 AHLASGAALAWGLRQFERDVLDGLGFGFDL 149 >gi|119503990|ref|ZP_01626071.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2080] gi|119459993|gb|EAW41087.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2080] Length = 259 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 79/205 (38%), Gaps = 18/205 (8%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNWRS 60 + A +L R+YG+ +++++ GR V+ G+ +LQ + V Sbjct: 6 EPAWLLHRRNYGDSGFLVDILGLNSGRISAVVKGGRRKARGGSYAGVLQPFTPLLVATSG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + R E+ + + L+ G L R LP+ C L+ + ++ Sbjct: 66 R-GELKTLSRLEL--AGASIDLAGERVFSGFYLNELLVRLLPKFVSCPTLFALYGGTIDA 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVGLP- 178 + + ELMLL+ +G+GL + ++ + G + R+ GL Sbjct: 123 LVVTE-AELDLRKFELMLLEELGYGLRFDTDANNDPIEAASAYLYDPTAGFLPRAFGLEG 181 Query: 179 -YA-------EKMLVLPSFLWKEEQ 195 + +++L + +L+ + Sbjct: 182 AWKKEGRLQGDQLLNMADWLFNGDG 206 >gi|308388650|gb|ADO30970.1| DNA repair protein (recombination protein o) [Neisseria meningitidis alpha710] Length = 248 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + A+ G + L+ +E A+SL+ A ++T Sbjct: 180 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 219 >gi|91775219|ref|YP_544975.1| DNA repair protein RecO [Methylobacillus flagellatus KT] gi|91775363|ref|YP_545119.1| DNA repair protein RecO [Methylobacillus flagellatus KT] gi|91709206|gb|ABE49134.1| DNA repair protein RecO [Methylobacillus flagellatus KT] gi|91709350|gb|ABE49278.1| DNA replication and repair protein RecO [Methylobacillus flagellatus KT] Length = 244 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 18/151 (11%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +R++GR + + M+ +LQA ++ W + Sbjct: 15 YVLHTYPFKETSLVVELFSREFGRVAAVAKGARRPRSAMRGMLQAFQPLQATWSGK---- 70 Query: 66 LGEFRFEVLESH-----CAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 E+ H LL L G L R LP + L+D + L Sbjct: 71 -----AELKNLHSMEWGAGLLLLRGEALMCGFYLNELLLRLLPREDGHDALFDYYSQTLR 125 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLT 149 V + + EL +L+ +G+ + L Sbjct: 126 ILAQDQVPVATTLRRFELRMLQELGYAVPLE 156 >gi|149178097|ref|ZP_01856692.1| probable DNA repair protein recO [Planctomyces maris DSM 8797] gi|148843017|gb|EDL57385.1| probable DNA repair protein recO [Planctomyces maris DSM 8797] Length = 248 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 7/154 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---- 59 + + +++ + + E + ++ TR +G+ + R++ +A + R Sbjct: 5 KTEGVVIRLADFSESSKVITWFTRDFGKTAALAKGA--KRLKSSFEAAIDLLATCRIVFI 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFL 118 + + L L + S LY I L L E +P ELYD L Sbjct: 63 RKSSGGLDILTEAQLVNRFRPYPGSLSNLYVGYYIAELLDALTEEYDPHPELYDAACEVL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 + K ++ EL +L+ IG C Sbjct: 123 RHLQEHDDFQKSLIKFELTILEEIGQLPQFEYCA 156 >gi|116333399|ref|YP_794926.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus brevis ATCC 367] gi|122269914|sp|Q03SC7|RECO_LACBA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116098746|gb|ABJ63895.1| DNA replication and repair protein RecO [Lactobacillus brevis ATCC 367] Length = 260 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 12/176 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQA---GNLVRVNWRS 60 I+L R Y E++ +++ T+++G+ + VR + +M + G+ V Sbjct: 9 HGILLFRRDYAERDFLIKFFTQEFGKKMFLVRGAKKRGFKMVADILPFTVGSYVGDI--- 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 L R E+ + +S+ +F Y + + P+ +P + Y + L Sbjct: 66 -ADDGLSYIRT-ARETRQFQDISADIFKNAYATYIMSLVDTAFPDSQPLPDWYHRVQRAL 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + +E+ L+ G L C V G S GG +C++ Sbjct: 124 TLIDDGVNAAIVTNIMEIQLMPAFGVAPQLQGCAVCGRNDLPFDYSESYGGLLCQA 179 >gi|282911204|ref|ZP_06319006.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus WBG10049] gi|282324899|gb|EFB55209.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus WBG10049] Length = 250 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ + R ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEYGAKVPLMAR--RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNKWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDVAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKYDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|307329119|ref|ZP_07608286.1| DNA repair protein RecO [Streptomyces violaceusniger Tu 4113] gi|306885314|gb|EFN16333.1| DNA repair protein RecO [Streptomyces violaceusniger Tu 4113] Length = 252 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 15/189 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR GR R + + + L+ + V V + S Sbjct: 7 FRDDGIVLRTQKLGEADRIISLLTRNNGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 66 Query: 61 R-----LAQNLGEFR-FEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYD 112 R + + L E + + +++ G + RF E EP ++ Y Sbjct: 67 RGGGELIGRGLPLCTQSETIAPYGGSIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYL 126 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGG 169 +L L + + + LL+++ G+ C G+ + S +GG Sbjct: 127 LLVGALRTLAAGEHQPHLVL--DAFLLRSLAVNGYAPSFNDCAKCGMPGPNRFFSVGAGG 184 Query: 170 AVCRSVGLP 178 +C +P Sbjct: 185 VICGECRVP 193 >gi|320105079|ref|YP_004180670.1| DNA repair protein RecO [Isosphaera pallida ATCC 43644] gi|319752361|gb|ADV64121.1| DNA repair protein RecO [Isosphaera pallida ATCC 43644] Length = 257 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 9/156 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A+++ E + +L V +R+ G+ + + P A +L+ V + + Sbjct: 8 ALVIRSTEVFETSKVLTVFSRELGKVSAIAKGAR-RLKSPFHSALDLLSVC--DMVLIHK 64 Query: 67 GEFRFEV-----LESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNC 120 G ++ LE L + LY + L L E P +L++ + L Sbjct: 65 GTDALDLVTEATLEERFDALKTDLEALYAGYYVAELLDGLTEHHVPHPKLFEAARVTLRH 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + ++ EL LL+ +G L CV G Sbjct: 125 LADSRLRRHRVLRFELALLRELGHAPALENCVHCGR 160 >gi|257068870|ref|YP_003155125.1| DNA replication and repair protein RecO [Brachybacterium faecium DSM 4810] gi|256559688|gb|ACU85535.1| DNA replication and repair protein RecO [Brachybacterium faecium DSM 4810] Length = 244 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 4/180 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDAI+L GE + I+ ++TR++G+ + + R L+ LV V + Sbjct: 6 YRDDAIVLRTHPLGEADRIITLLTRRHGKVRAVAKGVRRTGSRFGARLEPFTLVDVQLHA 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE-REPCLELYDMLNIFLN 119 + + + F + R E +P + ML L Sbjct: 66 GRSLHTVTQVVTIEAFAVGISAEYGRFTAASAMLETTDRLTDEFVDPNQRGFLMLVGALR 125 Query: 120 CHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + L L G+ +L C G + ++GG VC P Sbjct: 126 AMAEGRIPPPLVLDSFLLRTLAVSGWAPELRVCASCGADGPHHAIDIRAGGLVCTPCRRP 185 >gi|254521728|ref|ZP_05133783.1| DNA repair protein RecO [Stenotrophomonas sp. SKA14] gi|219719319|gb|EED37844.1| DNA repair protein RecO [Stenotrophomonas sp. SKA14] Length = 239 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 18/159 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M D +L R+Y E ++++EV++ Q+GR R + + ++ LQ +R + Sbjct: 2 MIEDDTGFVLHARAYRETSLLVEVLSAQHGRIGLLARGVSTAKGQVLRAALQPLQWIRFS 61 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSS------LFLYGLQSIVPLFRFLPEREPCLELY 111 AQ G E+ + A+ L ++ L G R P ++P ELY Sbjct: 62 -----AQQRG----ELAQLRAAEALDAAPRLVGQAMLAGFYLSELTLRLAPRQDPLPELY 112 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 + + + + E LL +G G +L Sbjct: 113 LAYGEARARLAVGAGLAWTLRRFERELLSALGLGFELDS 151 >gi|262040301|ref|ZP_06013552.1| DNA repair protein RecO [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330007688|ref|ZP_08306027.1| DNA repair protein RecO [Klebsiella sp. MS 92-3] gi|259042410|gb|EEW43430.1| DNA repair protein RecO [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535369|gb|EGF61851.1| DNA repair protein RecO [Klebsiella sp. MS 92-3] Length = 225 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 18/144 (12%) Query: 22 LEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCA 79 L+V T + GR + +S R ++ LQ + V + R EV A Sbjct: 2 LDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRFGGR---------GEVKTLRSA 52 Query: 80 KLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLNCHKIPSVIGK-IFV 132 + +S +L L G+ L+ R L EL+ + S + Sbjct: 53 EAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHCIQALAGASGSPEPALR 112 Query: 133 QIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G+D C +G Sbjct: 113 RFELALLGHLGYGVDFLHCAGSGE 136 >gi|161502269|ref|YP_001569381.1| hypothetical protein SARI_00299 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863616|gb|ABX20239.1| hypothetical protein SARI_00299 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 222 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 22 LEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCA 79 L+V T + GR + +S R ++ LQ + + + R EV A Sbjct: 2 LDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLRYSGR---------GEVKTLRSA 52 Query: 80 KLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY-DMLNIFLNCHKIPSVIGKIFV 132 + +S +L L G+ L+ R L EL+ D LN + Sbjct: 53 EAVSLALPLNGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQALAGTTGSPEPVLR 112 Query: 133 QIELMLLKNIGFGLDLTKCVVTGVTQD 159 + EL LL ++G+G++ T C +G D Sbjct: 113 RFELALLGHLGYGVNFTHCAGSGEQVD 139 >gi|121605950|ref|YP_983279.1| DNA repair protein RecO [Polaromonas naphthalenivorans CJ2] gi|166221904|sp|A1VRT0|RECO_POLNA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120594919|gb|ABM38358.1| DNA repair protein RecO [Polaromonas naphthalenivorans CJ2] Length = 249 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 55/161 (34%), Gaps = 19/161 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 + A +L + E ++IL+V TR +GR R + S +PIL + V + Sbjct: 8 NEPAYVLHRYDWSESSLILDVFTRHHGRVALVARGAKKPSSSFRPILLPLQPLHVAFGG- 66 Query: 62 LAQNLGEFRFEVLESHCAKLL------SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ A+ S L G L R L +P L+D Sbjct: 67 --------DAEIRNLKSAEWQGGHVMPSGDALLSGYYLNELLMRLLARDDPHPLLFDAYA 118 Query: 116 IFLNCH--KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + P + EL LL+ IG L T Sbjct: 119 ATVQLLASQNPDTLQLALRAFELRLLQGIGLLPRLDAETAT 159 >gi|147677232|ref|YP_001211447.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum SI] gi|189039660|sp|A5D3W7|RECO_PELTS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146273329|dbj|BAF59078.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum SI] Length = 256 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 66/175 (37%), Gaps = 9/175 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-R 59 ++ DAI+L R GE + IL + +R++GR R + +Q R R Sbjct: 4 YKADAIVLRARDCGEGDKILTLYSREHGRIKAMAHGVSKPTSRKRGAVQPFTRSRFLLRR 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFL 118 R + + E +E+ L S + + L L PE EP L L + + Sbjct: 64 GRELDTVS--QCEGVET-FPFLRESLERIGYASYVAELVEALTPEGEPNESL-FFLLLDV 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVC 172 + EL + +G+ L +C G L+ S GGAVC Sbjct: 120 LRLLAGGDAEMLARAFELKVAALLGYCPVLERCSHCQGALAGPLFFSSSLGGAVC 174 >gi|302038212|ref|YP_003798534.1| putative DNA repair protein RecO [Candidatus Nitrospira defluvii] gi|300606276|emb|CBK42609.1| putative DNA repair protein RecO [Candidatus Nitrospira defluvii] Length = 252 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 5/175 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 AI+L R +G+ + I+ T + G+ G R + R+ +++ L +++ + Sbjct: 8 AIVLHSRKWGDADRIVTFYTMRLGKLRGVARGARRLKSRLGGMIEPFTLCQLDLFEKPGD 67 Query: 65 NLGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 +L L+ AK L + + + + E +P +++ML L Sbjct: 68 SLYRISQVALDEPFAKFRDDLTLMTAAGRMVNLVSAVMAEGDPEPRVFEMLESGLRTLLE 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVG 176 + ++ LL GF +C G L SP +GG VC Sbjct: 128 SRDAAWTTLLFQIRLLGMTGFRPQTEQCATCGQVHRSPLPQFSPMAGGIVCERCA 182 >gi|145296238|ref|YP_001139059.1| DNA repair protein RecO [Corynebacterium glutamicum R] gi|140846158|dbj|BAF55157.1| hypothetical protein [Corynebacterium glutamicum R] Length = 242 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 9/181 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 ++D A+++ +GE + I+ ++TR +G G + + + + LQ + V + Sbjct: 6 FRDRALVVKTHDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYP 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIF 117 R + + + + + ++ +I+ + L E +P L++ Sbjct: 66 GRKLSTISGA--DTVGYYASGIIEDFTRYSCASAILEIATHLAGLENDPH--LFEETTRA 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + + L + + G+ L C G P GGAVC Sbjct: 122 LKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGRPGPHNAFHPGIGGAVCLYCRP 181 Query: 178 P 178 P Sbjct: 182 P 182 >gi|256419508|ref|YP_003120161.1| DNA repair protein RecO [Chitinophaga pinensis DSM 2588] gi|256034416|gb|ACU57960.1| DNA repair protein RecO [Chitinophaga pinensis DSM 2588] Length = 243 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 10/155 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP---ILQAGNLVR-- 55 M + I+L YG+ + I+ + T +G V +S + + + Q GN++ Sbjct: 1 MLHKTRGIVLRTVKYGDTSAIVNIFTELFGVQSYMVNGVRSSKPKAKGNLFQPGNILEMV 60 Query: 56 -VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++ + Q + EF+ + + + + L I L + L E E ++LY Sbjct: 61 VYHYEQKTIQRISEFK--LGYIYTSLHFNIVKNTVALYMIELLQKSLREPEQQVDLYYFA 118 Query: 115 NIFLNCHKIP--SVIGKIFVQIELMLLKNIGFGLD 147 L + + I + L L +++GF L+ Sbjct: 119 EQALQALDMAPLGIAANIPLYFTLKLAEHLGFRLN 153 >gi|239620813|ref|ZP_04663844.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516389|gb|EEQ56256.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 249 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 9/190 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 14 YRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVLIAE 73 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIF 117 R + E + ++ A + + IV + E E Y +L Sbjct: 74 GRSLD--VVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKIASTEHEQLPNQYRLLIGA 131 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 LN S + + L G+ L CVV G + ++S SGG +C + Sbjct: 132 LNALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAE-PAYLSIASGGVMCEADH 190 Query: 177 LPYAEKMLVL 186 A ++ Sbjct: 191 TTDARRIAPF 200 >gi|59801847|ref|YP_208559.1| hypothetical protein NGO1509 [Neisseria gonorrhoeae FA 1090] gi|194099318|ref|YP_002002416.1| RecO [Neisseria gonorrhoeae NCCP11945] gi|239999576|ref|ZP_04719500.1| RecO [Neisseria gonorrhoeae 35/02] gi|240014753|ref|ZP_04721666.1| RecO [Neisseria gonorrhoeae DGI18] gi|240017201|ref|ZP_04723741.1| RecO [Neisseria gonorrhoeae FA6140] gi|240113375|ref|ZP_04727865.1| RecO [Neisseria gonorrhoeae MS11] gi|240116279|ref|ZP_04730341.1| RecO [Neisseria gonorrhoeae PID18] gi|240118566|ref|ZP_04732628.1| RecO [Neisseria gonorrhoeae PID1] gi|240121276|ref|ZP_04734238.1| RecO [Neisseria gonorrhoeae PID24-1] gi|240128777|ref|ZP_04741438.1| RecO [Neisseria gonorrhoeae SK-93-1035] gi|260439907|ref|ZP_05793723.1| RecO [Neisseria gonorrhoeae DGI2] gi|268595389|ref|ZP_06129556.1| DNA repair protein recO [Neisseria gonorrhoeae 35/02] gi|268599448|ref|ZP_06133615.1| DNA repair protein [Neisseria gonorrhoeae MS11] gi|268601944|ref|ZP_06136111.1| DNA repair protein [Neisseria gonorrhoeae PID18] gi|268604274|ref|ZP_06138441.1| DNA repair protein [Neisseria gonorrhoeae PID1] gi|268687160|ref|ZP_06154022.1| DNA repair protein [Neisseria gonorrhoeae SK-93-1035] gi|291043181|ref|ZP_06568904.1| DNA repair protein recO [Neisseria gonorrhoeae DGI2] gi|8134656|sp|Q9ZHY2|RECO_NEIG1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238693224|sp|B4RQ94|RECO_NEIG2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|4105531|gb|AAD05426.1| RecO [Neisseria gonorrhoeae] gi|59718742|gb|AAW90147.1| putative DNA recombination protein O [Neisseria gonorrhoeae FA 1090] gi|193934608|gb|ACF30432.1| RecO [Neisseria gonorrhoeae NCCP11945] gi|268548778|gb|EEZ44196.1| DNA repair protein recO [Neisseria gonorrhoeae 35/02] gi|268583579|gb|EEZ48255.1| DNA repair protein [Neisseria gonorrhoeae MS11] gi|268586075|gb|EEZ50751.1| DNA repair protein [Neisseria gonorrhoeae PID18] gi|268588405|gb|EEZ53081.1| DNA repair protein [Neisseria gonorrhoeae PID1] gi|268627444|gb|EEZ59844.1| DNA repair protein [Neisseria gonorrhoeae SK-93-1035] gi|291012787|gb|EFE04770.1| DNA repair protein recO [Neisseria gonorrhoeae DGI2] gi|317164827|gb|ADV08368.1| hypothetical protein NGTW08_1406 [Neisseria gonorrhoeae TCDC-NG08107] Length = 247 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V+W Sbjct: 8 HEPVFMLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPASVSW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWMGGWRQPQGRALFSGLYVNELVLKLTAREDPMSELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 119 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + GA+ G + L+ +E A+SL+ A ++T Sbjct: 179 RDTGALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 218 >gi|270307942|ref|YP_003330000.1| recombinational DNA repair protein (RecF pathway) [Dehalococcoides sp. VS] gi|270153834|gb|ACZ61672.1| recombinational DNA repair protein (RecF pathway) [Dehalococcoides sp. VS] Length = 262 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 39/195 (20%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++ AI++ GE + IL ++T G GF ++ + + S+ Sbjct: 6 DFKTRAIVVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTK----------------SK 49 Query: 62 LAQNLGEFRFEVLESHCAKLLS---------------SSLFLYGLQS-IVPLF-RFLPER 104 L+ +L + + K + +SL L + + L F PE Sbjct: 50 LSGHLELLCYSEVSLARGKAIDTITGSQTIQSFLNIRNSLQLSAMAFYVCELAYHFSPEE 109 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG----VTQDL 160 ++ +L L S EL LL+N G+ +L +C T + Sbjct: 110 SANPSIFQLLLSTLEELDNESQAELCIKYFELHLLENSGYKPELRECANCHKKLLATTN- 168 Query: 161 LWVSPKSGGAVCRSV 175 + S +SGG +C S Sbjct: 169 -YYSSESGGIICPSC 182 >gi|317401888|gb|EFV82495.1| hypothetical protein HMPREF0005_00527 [Achromobacter xylosoxidans C54] Length = 202 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 56/150 (37%), Gaps = 18/150 (12%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L ++ E ++I++ +R +G + + ++P+L A + ++W Sbjct: 19 PGYMLHATAWRETSLIVQTFSRDHGCVAMVAKGAKRPYSVLRPVLSAFQPLLLSWTG--- 75 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR------FLPEREPCLELYDMLNIF 117 EV A+++ L G + + LP + L+D ++ Sbjct: 76 ------NGEVKTLTRAEIMGVR-ALNGTALMSAWYMNELLLRLLPREDAHPLLFDAYDMA 128 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L + + E LL+ G+G+D Sbjct: 129 LQQLSGGTRAAGALRRFEWTLLRETGYGVD 158 >gi|283770642|ref|ZP_06343534.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus H19] gi|283460789|gb|EFC07879.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus H19] Length = 250 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ ++G + + ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAIDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNQWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|302534318|ref|ZP_07286660.1| DNA repair protein RecO [Streptomyces sp. C] gi|302443213|gb|EFL15029.1| DNA repair protein RecO [Streptomyces sp. C] Length = 248 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 72/188 (38%), Gaps = 14/188 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHADVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R + +G + E++ + + + +++ E E + Y + Sbjct: 64 RGSDLVGRSLPLCTQTEIIAPYGNGIATDYARYTAGTAMLETAERFTENEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ S +GG Sbjct: 124 LVGALRTLSRGEHEPHLIL--DAFLLRSLAVNGYAPSFEDCAKCGIHGPNRHFSVAAGGV 181 Query: 171 VCRSVGLP 178 +C +P Sbjct: 182 ICGDCRVP 189 >gi|325915830|ref|ZP_08178129.1| DNA replication and repair protein RecO [Xanthomonas vesicatoria ATCC 35937] gi|325537951|gb|EGD09648.1| DNA replication and repair protein RecO [Xanthomonas vesicatoria ATCC 35937] Length = 240 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN--W 58 + +L VR++ E ++++EV+T QYGR R Q R ++ LQ L++ Sbjct: 5 HEHGFVLHVRAWRETSVLVEVLTEQYGRVGLLARGVQGPRKQALRAALQPLQLIQFTAVQ 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R LAQ + E L++ +L+ + L G L R P + ELY Sbjct: 65 RGELAQ---LRQAEALDT-APRLVGERM-LAGFYISELLLRLAPRNDSVPELYACYAQAR 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +L+ +GF DL Sbjct: 120 AHLASDLSLAWSLRRFERDVLEGLGFAFDL 149 >gi|261391960|emb|CAX49424.1| DNA repair protein RecO (recombination protein O) [Neisseria meningitidis 8013] Length = 247 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 8 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 119 EVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + A+ G + L+ +E A+SL+ A ++T Sbjct: 179 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 218 >gi|240081161|ref|ZP_04725704.1| RecO [Neisseria gonorrhoeae FA19] gi|240124109|ref|ZP_04737065.1| RecO [Neisseria gonorrhoeae PID332] gi|240126274|ref|ZP_04739160.1| RecO [Neisseria gonorrhoeae SK-92-679] gi|254494292|ref|ZP_05107463.1| DNA repair protein recO [Neisseria gonorrhoeae 1291] gi|268597271|ref|ZP_06131438.1| DNA repair protein recO [Neisseria gonorrhoeae FA19] gi|268682733|ref|ZP_06149595.1| DNA repair protein recO [Neisseria gonorrhoeae PID332] gi|268684857|ref|ZP_06151719.1| DNA repair protein recO [Neisseria gonorrhoeae SK-92-679] gi|226513332|gb|EEH62677.1| DNA repair protein recO [Neisseria gonorrhoeae 1291] gi|268551059|gb|EEZ46078.1| DNA repair protein recO [Neisseria gonorrhoeae FA19] gi|268623017|gb|EEZ55417.1| DNA repair protein recO [Neisseria gonorrhoeae PID332] gi|268625141|gb|EEZ57541.1| DNA repair protein recO [Neisseria gonorrhoeae SK-92-679] Length = 247 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V+W Sbjct: 8 HEPVFMLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPASVSW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWMGGWRQPQGRALFSGLYVNELVLKLTAREDPMSELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 119 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + GA+ G + L+ +E A+SL+ A ++T Sbjct: 179 RDTGALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 218 >gi|225872266|ref|YP_002753721.1| DNA repair protein RecO [Acidobacterium capsulatum ATCC 51196] gi|225794025|gb|ACO34115.1| DNA repair protein RecO [Acidobacterium capsulatum ATCC 51196] Length = 251 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 67/168 (39%), Gaps = 12/168 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 ++I+L E ++++ + TR+ G+ G ++G R + L+ V ++ + Sbjct: 7 ESIVLKSWPLHEADLVVSLFTREAGKIKGIAKSGAKSRRRFGGALEPMTHVLASYVEKPR 66 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 Q L E++ S + + + L LP+ +P ++ ++ L + Sbjct: 67 QELVRLDACEIVTSPLSDPMDYARAAALAFYTEVLEEALPDHDPQEVIFRLVLSVLAHTR 126 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 ++ + L + + +G+ DLT C V P +G A Sbjct: 127 QGAIWMPV-TYFALWMPRLLGWLPDLTHCAVCDE--------PLTGRA 165 >gi|23336019|ref|ZP_00121248.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Bifidobacterium longum DJO10A] gi|23464726|ref|NP_695329.1| DNA repair protein RecO [Bifidobacterium longum NCC2705] gi|189438981|ref|YP_001954062.1| DNA repair protein RecO [Bifidobacterium longum DJO10A] gi|312132421|ref|YP_003999760.1| reco [Bifidobacterium longum subsp. longum BBMN68] gi|322689574|ref|YP_004209308.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis 157F] gi|42559479|sp|Q8G7Y4|RECO_BIFLO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238692037|sp|B3DQ65|RECO_BIFLD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|23325293|gb|AAN23965.1| hypothetical protein BL0100 [Bifidobacterium longum NCC2705] gi|189427416|gb|ACD97564.1| Recombinational DNA repair protein [Bifidobacterium longum DJO10A] gi|291516146|emb|CBK69762.1| DNA replication and repair protein RecO [Bifidobacterium longum subsp. longum F8] gi|311772908|gb|ADQ02396.1| RecO [Bifidobacterium longum subsp. longum BBMN68] gi|320460910|dbj|BAJ71530.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis 157F] Length = 239 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 9/190 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVLIAE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIF 117 R + E + ++ A + + IV + E E Y +L Sbjct: 64 GRSLD--VVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKIASTEHEQLPNQYRLLIGA 121 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 LN S + + L G+ L CVV G + ++S SGG +C + Sbjct: 122 LNALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAE-PAYLSIASGGVMCEADH 180 Query: 177 LPYAEKMLVL 186 A ++ Sbjct: 181 TTDARRIAPF 190 >gi|254382925|ref|ZP_04998281.1| DNA repair protein recO [Streptomyces sp. Mg1] gi|194341826|gb|EDX22792.1| DNA repair protein recO [Streptomyces sp. Mg1] Length = 248 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 91/235 (38%), Gaps = 22/235 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGAGLEPFSHADVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + +++ + +++ +++ E E + Y + Sbjct: 64 RGSELIGRSLPLCTQTQIIAPYGNGIVTDYARYTAGTAMLETAERFTENEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+++ G+ C G+ S +GG Sbjct: 124 LVGALRTLSRGEHEPHLIL--DAFLLRSLAVNGYAPSFDDCAKCGIHGPNRHFSVAAGGV 181 Query: 171 VCRSVG-----LPYAEKMLVLPSFL---WKEEQTIDADSLKSAFQLTDYFLNKYA 217 +C +P +E + +L + L W +A ++ L +L+ + Sbjct: 182 ICGDCRVPGSVVPSSEAIALLSALLTGDWGHADACEARHVREGSGLVSAYLHWHL 236 >gi|293398514|ref|ZP_06642692.1| DNA repair protein RecO [Neisseria gonorrhoeae F62] gi|291610985|gb|EFF40082.1| DNA repair protein RecO [Neisseria gonorrhoeae F62] Length = 247 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V+W Sbjct: 8 HEPVFMLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPASVSW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWMGGWRQPQGRALFSGLYVNELVLKLTAREDPMSELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 119 KVMEAVCGEANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + GA+ G + L+ +E A+SL+ A ++T Sbjct: 179 RDTGALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 218 >gi|294669325|ref|ZP_06734404.1| DNA repair protein RecO [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308735|gb|EFE49978.1| DNA repair protein RecO [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 244 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ LEV +R+YGR R+ + + ++ IL + +W Sbjct: 10 HEPVFLLNAVPWRESSLRLEVFSRRYGRVALLARSARKRQSELRGILVPFVPIDASW--- 66 Query: 62 LAQNLGEFRFEVLESHCAKLLS------SSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ L GL +++ +P +LYD L Sbjct: 67 ------YGNTELKTLHRAEWLGGWSQPQGRALFSGLYLNELVWKLTAREDPHPKLYDALA 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E LL +G+ DL Sbjct: 121 EAHREICTRNNHVAALRRFEWRLLTELGYAPDL 153 >gi|312196054|ref|YP_004016115.1| DNA repair protein RecO [Frankia sp. EuI1c] gi|311227390|gb|ADP80245.1| DNA repair protein RecO [Frankia sp. EuI1c] Length = 243 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 12/178 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR- 59 ++D+ ++L GE + I+ + TR+ GR + + S R L+ V + Sbjct: 4 YRDEGVVLRTMPLGEADRIVTLFTRRNGRVRAVAKGVRRTSSRFGARLEPAMYVDLQLHQ 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS--SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + + ++L S+ A L + + EREP L L+ +L Sbjct: 64 GRSLDTV--TQADLLGSYGAVLATDYARHTAAAVMLETAERLTSEEREPALRLFLLLVGG 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + ++ LL+ + G+G+ L C G VS GG VC Sbjct: 122 LRTLASGEHPPGLV--MDAFLLRALAVSGYGMALDDCARCGEPGPHPSVSVAGGGVVC 177 >gi|226943501|ref|YP_002798574.1| DNA repair protein RecO [Azotobacter vinelandii DJ] gi|226718428|gb|ACO77599.1| DNA repair protein RecO [Azotobacter vinelandii DJ] Length = 230 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 5/145 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A IL R Y E +++ + T Q GR +R+ + + + + + + R R ++ Sbjct: 5 PAFILHSRPYRESSVLADFFTPQ-GRLRAAMRSARG-KSGSLARPFVPLELVLRGR-SEL 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 R E S + L+ + GL L R LP +P L++ ++ L+ + Sbjct: 62 KSVARLESNGS--PRWLTGASLFSGLYLNELLIRLLPPEDPFPSLFEHYSLTLDALAVGR 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL +G+G L + Sbjct: 120 PLEPLLRAFEWRLLVELGYGFSLDR 144 >gi|42739353|gb|AAS43279.1| recombination protein O [Bacillus cereus ATCC 10987] Length = 257 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 74/219 (33%), Gaps = 19/219 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 10 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKXPKSRLASVSQLMTHGHFLI 69 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S + L Y + ++ L++ML Sbjct: 70 Q--MGSGLGTLQQGEIISTMKEFREDIFLTAYASFIXELTDKQXXDKXHNPYLFEMLYQT 127 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 128 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 187 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF-LNK 215 + + +++ +L +F L++ Sbjct: 188 Q-------------DQYRIPVGEAVHKLLRLFYHFDLHR 213 >gi|40063136|gb|AAR37983.1| DNA repair protein RecO [uncultured marine bacterium 561] Length = 259 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 78/205 (38%), Gaps = 18/205 (8%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNWRS 60 + A +L R+YG+ +++++ GR V+ G+ +LQ + V Sbjct: 6 EPAWLLHRRNYGDSGFLVDILGLNSGRISAVVKGGRRKARGGSFAGVLQPFTPLLVATSG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + R E+ + L+ G L R LP+ C L+ + ++ Sbjct: 66 R-GELKTLSRLEL--AGAGVELAGERVFSGFYLNELLVRLLPKFVSCPTLFALYGGTIDA 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVGLPY 179 + + + ELMLL+ +G+GL + ++ + G + R+ G Sbjct: 123 L-VATEAELDLRKFELMLLEELGYGLRFDMDANNDPIEAANAYLYDPTAGFLPRAFGFDD 181 Query: 180 A---------EKMLVLPSFLWKEEQ 195 A +++L + +L+ + Sbjct: 182 AWKKESRLQGDQLLNMADWLFNGDG 206 >gi|326333985|ref|ZP_08200215.1| DNA repair protein RecO [Nocardioidaceae bacterium Broad-1] gi|325948264|gb|EGD40374.1| DNA repair protein RecO [Nocardioidaceae bacterium Broad-1] Length = 242 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 8/182 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+AI+L GE + I+ ++TR +GR + + + L+ V + + Sbjct: 4 YRDEAIVLRTHKLGEADRIITMLTRHHGRVRAVAKGVRRTTSRWGSRLEPFTHVDLQFAE 63 Query: 60 SRLAQNLGEFRFEVLES-HCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 R + + E L H L + G + R + E EP + Y +L Sbjct: 64 GRNLDTI--TQAETLTLFHAGIGLDYDRYTAGTAMLETADRLVHEEGEPAPQQYLLLVGG 121 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + + L L G+ C G+ W + GGA+C + Sbjct: 122 LRVLAQGDRLPRHVLDSYLLRSLAVAGYAPSFEACARCGLEGPHRWFNVSMGGALCTTCR 181 Query: 177 LP 178 +P Sbjct: 182 VP 183 >gi|148981905|ref|ZP_01816563.1| DNA repair protein RecO [Vibrionales bacterium SWAT-3] gi|145960706|gb|EDK26048.1| DNA repair protein RecO [Vibrionales bacterium SWAT-3] Length = 222 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 17/144 (11%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 IL++ + ++GR + +S R ++ LQ + + W + + Sbjct: 2 ILDIFSEEFGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNSS---------MKTLRQ 52 Query: 79 AKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFV 132 A+ +S L L G+ ++ R L P L+ L Sbjct: 53 AEPISLGLPLTGINLYSAMYVNELIGRVLMAEVPMPALFHDYLHALTELAHNENPEPALR 112 Query: 133 QIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +G+G+D C TG Sbjct: 113 RFELALLSAMGYGVDFLHCAGTGE 136 >gi|33597817|ref|NP_885460.1| hypothetical protein BPP3293 [Bordetella parapertussis 12822] gi|33602719|ref|NP_890279.1| hypothetical protein BB3744 [Bordetella bronchiseptica RB50] gi|33574246|emb|CAE38578.1| hypothetical protein BPP3293 [Bordetella parapertussis] gi|33577161|emb|CAE35718.1| hypothetical protein BB3744 [Bordetella bronchiseptica RB50] Length = 195 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 6/144 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L ++ E ++I++ +R+YG + + ++P+L A + ++W Sbjct: 12 PGYMLHATAWRETSLIVQAFSREYGCIALVAKGAKRPYSVLRPVLSAFQPLLLSWSG-AG 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + R E+ L + L R LP + LYD + L Sbjct: 71 EVKTMTRAEIAGVRP---LGGPALMSAWYMNELLLRLLPREDAHPVLYDAYDTALTQLSA 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD 147 S + E +LL+ G+GLD Sbjct: 128 GSRAAGALRRFEWILLRETGYGLD 151 >gi|302333242|gb|ADL23435.1| putative recombinational DNA repair protein (RecF pathway) [Staphylococcus aureus subsp. aureus JKD6159] Length = 250 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ ++G + + ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNQWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|282916836|ref|ZP_06324594.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus D139] gi|282319323|gb|EFB49675.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus D139] Length = 250 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ ++G + + ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNQWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|82751169|ref|YP_416910.1| recombination protein [Staphylococcus aureus RF122] gi|119361488|sp|Q2YT13|RECO_STAAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|82656700|emb|CAI81127.1| probable recombination protein [Staphylococcus aureus RF122] Length = 250 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ ++G + + ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNQWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|15924556|ref|NP_372090.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus Mu50] gi|15927146|ref|NP_374679.1| hypothetical protein SA1395 [Staphylococcus aureus subsp. aureus N315] gi|156979884|ref|YP_001442143.1| hypothetical protein SAHV_1553 [Staphylococcus aureus subsp. aureus Mu3] gi|257793642|ref|ZP_05642621.1| DNA repair protein RecO [Staphylococcus aureus A9781] gi|258411058|ref|ZP_05681338.1| DNA repair protein RecO [Staphylococcus aureus A9763] gi|258420138|ref|ZP_05683093.1| DNA repair protein RecO [Staphylococcus aureus A9719] gi|258423994|ref|ZP_05686876.1| DNA repair protein RecO [Staphylococcus aureus A9635] gi|258437398|ref|ZP_05689382.1| DNA repair protein recO [Staphylococcus aureus A9299] gi|258443604|ref|ZP_05691943.1| DNA repair protein recO [Staphylococcus aureus A8115] gi|258446811|ref|ZP_05694965.1| DNA repair protein recO [Staphylococcus aureus A6300] gi|258448725|ref|ZP_05696837.1| DNA repair protein recO [Staphylococcus aureus A6224] gi|258453542|ref|ZP_05701520.1| DNA repair protein recO [Staphylococcus aureus A5937] gi|282893067|ref|ZP_06301301.1| DNA repair protein RecO [Staphylococcus aureus A8117] gi|282928199|ref|ZP_06335804.1| DNA repair protein RecO [Staphylococcus aureus A10102] gi|295406689|ref|ZP_06816494.1| DNA repair protein RecO [Staphylococcus aureus A8819] gi|297245729|ref|ZP_06929594.1| DNA repair protein RecO [Staphylococcus aureus A8796] gi|54039036|sp|P65986|RECO_STAAN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54041796|sp|P65985|RECO_STAAM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221911|sp|A7X2W3|RECO_STAA1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13701364|dbj|BAB42658.1| SA1395 [Staphylococcus aureus subsp. aureus N315] gi|14247337|dbj|BAB57728.1| similar to DNA repair protein RecO [Staphylococcus aureus subsp. aureus Mu50] gi|156722019|dbj|BAF78436.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257787614|gb|EEV25954.1| DNA repair protein RecO [Staphylococcus aureus A9781] gi|257840208|gb|EEV64672.1| DNA repair protein RecO [Staphylococcus aureus A9763] gi|257843849|gb|EEV68243.1| DNA repair protein RecO [Staphylococcus aureus A9719] gi|257845615|gb|EEV69647.1| DNA repair protein RecO [Staphylococcus aureus A9635] gi|257848603|gb|EEV72591.1| DNA repair protein recO [Staphylococcus aureus A9299] gi|257851010|gb|EEV74953.1| DNA repair protein recO [Staphylococcus aureus A8115] gi|257854386|gb|EEV77335.1| DNA repair protein recO [Staphylococcus aureus A6300] gi|257858003|gb|EEV80892.1| DNA repair protein recO [Staphylococcus aureus A6224] gi|257864273|gb|EEV87023.1| DNA repair protein recO [Staphylococcus aureus A5937] gi|282590006|gb|EFB95088.1| DNA repair protein RecO [Staphylococcus aureus A10102] gi|282764385|gb|EFC04511.1| DNA repair protein RecO [Staphylococcus aureus A8117] gi|285817248|gb|ADC37735.1| DNA recombination and repair protein RecO [Staphylococcus aureus 04-02981] gi|294968436|gb|EFG44460.1| DNA repair protein RecO [Staphylococcus aureus A8819] gi|297177380|gb|EFH36632.1| DNA repair protein RecO [Staphylococcus aureus A8796] gi|329727140|gb|EGG63596.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 21172] gi|329733186|gb|EGG69523.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 21193] Length = 250 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ ++G + + ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNQWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|21283247|ref|NP_646335.1| hypothetical protein MW1518 [Staphylococcus aureus subsp. aureus MW2] gi|49486401|ref|YP_043622.1| putative recombination protein O [Staphylococcus aureus subsp. aureus MSSA476] gi|38258613|sp|Q8NWB5|RECO_STAAW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56749514|sp|Q6G901|RECO_STAAS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|21204687|dbj|BAB95383.1| MW1518 [Staphylococcus aureus subsp. aureus MW2] gi|49244844|emb|CAG43305.1| putative recombination protein O [Staphylococcus aureus subsp. aureus MSSA476] Length = 250 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ ++G + + ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNQWRG-----MGTLNSVDVISQHYKLQMDLFVSSYASLAAETIERSMDEGDIAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|161511021|ref|NP_980671.2| DNA repair protein RecO [Bacillus cereus ATCC 10987] gi|61215101|sp|Q730N8|RECO_BACC1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 248 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 74/219 (33%), Gaps = 19/219 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M+ + + I++ YGE N I+ + +R+ G+ R + R+ + Q Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKXPKSRLASVSQLMTHGHFLI 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + LG + + S + L Y + ++ L++ML Sbjct: 61 Q--MGSGLGTLQQGEIISTMKEFREDIFLTAYASFIXELTDKQXXDKXHNPYLFEMLYQT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + + +L +G C + D + S + GG +C Sbjct: 119 LHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAE 178 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF-LNK 215 + + +++ +L +F L++ Sbjct: 179 Q-------------DQYRIPVGEAVHKLLRLFYHFDLHR 204 >gi|296454502|ref|YP_003661645.1| DNA repair protein RecO [Bifidobacterium longum subsp. longum JDM301] gi|296183933|gb|ADH00815.1| DNA repair protein RecO [Bifidobacterium longum subsp. longum JDM301] Length = 239 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 11/179 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVLIAE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL---YDMLNI 116 R + E + ++ A + + IV L E +L Y +L Sbjct: 64 GRSLD--VVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKLASTE-HEQLTNQYRLLIG 120 Query: 117 FLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN S + + L G+ L CVV G + ++S SGG +C + Sbjct: 121 ALNALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAE-PAYLSIASGGVMCEA 178 >gi|310659077|ref|YP_003936798.1| DNA double strand break repair/recombination protein [Clostridium sticklandii DSM 519] gi|308825855|emb|CBH21893.1| DNA double strand break repair and homologous recombination factor [Clostridium sticklandii] Length = 248 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 78/182 (42%), Gaps = 9/182 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I++ YGE + IL +++++ G+ F + S R++ L + + + Sbjct: 1 MQIETEGIVVKTVKYGEADTILTIVSQKLGKITVFTK--ASKRVKSPLMSASQIFAYSNF 58 Query: 61 RLAQNLGEF---RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 L G + R E+++++ F Y + + + E + ++L+++L Sbjct: 59 VLTHQSGSYRLQRVELIKNYYKISTDLDKFFYASYFMELSEKLMIEHQTNIKLFNLLKDT 118 Query: 118 LNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCR 173 L+ ++ EL +L+ GF ++ KC G+ + + S GG +C+ Sbjct: 119 LDILLELDTQKLELMRIVYELKILECSGFKPEVLKCANCGIIQLERSRYFSIIEGGIICK 178 Query: 174 SV 175 Sbjct: 179 DC 180 >gi|157144499|ref|YP_001451818.1| hypothetical protein CKO_00217 [Citrobacter koseri ATCC BAA-895] gi|157081704|gb|ABV11382.1| hypothetical protein CKO_00217 [Citrobacter koseri ATCC BAA-895] Length = 225 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 22 LEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCA 79 L+V T + GR + +S R ++ LQ + + + R EV A Sbjct: 2 LDVFTEESGRVRLVAKGARSKRSSLKGALQPFTPLLLRFGGR---------GEVKTLRSA 52 Query: 80 KLLSSSLFLYGLQSIVPLF------RFLPEREPCLELY-DMLNIFLNCHKIPSVIGKIFV 132 + +S +L L G+ L+ R L EL+ D LN + Sbjct: 53 EAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQSLAGATGSPEPALR 112 Query: 133 QIELMLLKNIGFGLDLTKCVVTGVTQD 159 + EL LL ++G+G+D C +G T D Sbjct: 113 RFELALLGHLGYGVDFLHCAGSGETVD 139 >gi|26988168|ref|NP_743593.1| DNA repair protein RecO [Pseudomonas putida KT2440] gi|38258497|sp|Q88MY3|RECO_PSEPK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|24982902|gb|AAN67057.1|AE016334_6 DNA repair protein RecO [Pseudomonas putida KT2440] Length = 227 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 5/145 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ T Q GR +R +S + +++ + V R R Sbjct: 8 PAYVLHSRAYKETSALVDFFTPQ-GRMRAVLRRARS-KGGSLVRPFVSLEVELRGRGE-- 63 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L A L +LF GL L R LP P +++ + L Sbjct: 64 LKNVSRMDSTGIAAWLHGDALF-SGLYLNELLMRLLPAEAPFPTIFEHYTLTLQALAEGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL +G+ L + Sbjct: 123 PLEPLLRSFEWRLLDELGYAFSLNQ 147 >gi|148549492|ref|YP_001269594.1| DNA repair protein RecO [Pseudomonas putida F1] gi|166221906|sp|A5W8F0|RECO_PSEP1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148513550|gb|ABQ80410.1| DNA replication and repair protein RecO [Pseudomonas putida F1] Length = 227 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ T Q GR +R + + +++ L+ + R R + Sbjct: 8 PAYVLHSRAYKETSALVDFFTPQ-GRMRAVLRRARG-KGGSLVRPFVLLELELRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G + S A L GL L R LP P +++ + L Sbjct: 66 NVGR----MDSSGIAAWLHGDALFSGLYLNELLMRLLPAEAPFPAIFEHYTLTLQALAEG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL +G+ L++ Sbjct: 122 RPLEPLLRSFEWRLLDELGYAFSLSQ 147 >gi|296269159|ref|YP_003651791.1| DNA repair protein RecO [Thermobispora bispora DSM 43833] gi|296091946|gb|ADG87898.1| DNA repair protein RecO [Thermobispora bispora DSM 43833] Length = 260 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 95/238 (39%), Gaps = 15/238 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L + GE + I+ ++T++ G+ G + + + R L+ V + + Sbjct: 4 YRDEGVVLRTQKLGEADRIITILTKRTGKVRGVAKGIRRTTSRFGARLEPFTHVDLQLHA 63 Query: 61 -RLAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIF 117 R + E L + A + + + G+ + R E+EP L L+ +L Sbjct: 64 GRSLD--VITQAETLHPYGQAIVRDYARYTAGMAMLETADRLAAAEKEPALRLFLLLVGG 121 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS-- 174 L + ++ + L L G+ LT C G + + + +GGAVC + Sbjct: 122 LRTLAEGAHEPRLVLDAFLLRSLAVAGYAPALTACARCGG-EAVQAFAIAAGGAVCGACR 180 Query: 175 ---VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR 229 +P + ++ + L + T D + + + F+ +Y H LR Sbjct: 181 PPGAAVPAPGTLELMNALLRGDWATADGSEPRQRSECSG-FVARYLQWHLEHGIRSLR 237 >gi|57651959|ref|YP_186463.1| RecO family DNA repair protein [Staphylococcus aureus subsp. aureus COL] gi|87162406|ref|YP_494221.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|151221681|ref|YP_001332503.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus str. Newman] gi|161509794|ref|YP_001575453.1| recombination protein RecO [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140014|ref|ZP_03564507.1| recombination protein RecO [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258450605|ref|ZP_05698667.1| RecO family DNA repair protein [Staphylococcus aureus A5948] gi|262049141|ref|ZP_06022018.1| hypothetical protein SAD30_0298 [Staphylococcus aureus D30] gi|262051226|ref|ZP_06023450.1| hypothetical protein SA930_1657 [Staphylococcus aureus 930918-3] gi|282920115|ref|ZP_06327840.1| DNA repair protein RecO [Staphylococcus aureus A9765] gi|294848597|ref|ZP_06789343.1| DNA repair protein RecO [Staphylococcus aureus A9754] gi|62287350|sp|Q5HFJ4|RECO_STAAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361487|sp|Q2FGF7|RECO_STAA3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|172048906|sp|A6QHA9|RECO_STAAE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189039773|sp|A8Z4A5|RECO_STAAT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|57286145|gb|AAW38239.1| DNA repair protein RecO family [Staphylococcus aureus subsp. aureus COL] gi|87128380|gb|ABD22894.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|150374481|dbj|BAF67741.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus str. Newman] gi|160368603|gb|ABX29574.1| recombination protein RecO [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861763|gb|EEV84562.1| RecO family DNA repair protein [Staphylococcus aureus A5948] gi|259160863|gb|EEW45883.1| hypothetical protein SA930_1657 [Staphylococcus aureus 930918-3] gi|259162810|gb|EEW47375.1| hypothetical protein SAD30_0298 [Staphylococcus aureus D30] gi|282594463|gb|EFB99448.1| DNA repair protein RecO [Staphylococcus aureus A9765] gi|294824623|gb|EFG41046.1| DNA repair protein RecO [Staphylococcus aureus A9754] gi|329728390|gb|EGG64827.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 21189] Length = 250 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ ++G + + ++ +++ LQA G Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H + + Y + + R + E + Y Sbjct: 59 IYNQWRG-----MGTLNSVDVISQHYKLQMDLYVSSYAALAAETIERSMDEGDIAPYNYQ 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGA 170 +L L + + + V + L +K GF +C V+G DL+ S K GA Sbjct: 114 LLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGA 173 Query: 171 VCRSVG 176 + R Sbjct: 174 ISRQEA 179 >gi|297569283|ref|YP_003690627.1| DNA repair protein RecO [Desulfurivibrio alkaliphilus AHT2] gi|296925198|gb|ADH86008.1| DNA repair protein RecO [Desulfurivibrio alkaliphilus AHT2] Length = 269 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 17/214 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A+IL VRS+GE + I+ R+ G+ G + Q R++ + + + ++ Sbjct: 8 AVILAVRSHGEADKIVTFCGRETGKRNGIAKGAQRSRIRFVNKLELFSLLELSYEEGRSS 67 Query: 67 GEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHK 122 G R E+LE A + L + L + L E +P +L+ +L L Sbjct: 68 GLVRIDQAELLEPFAA-IRGDYLKYAAASLVGELLQAWLEEADPDPQLFSLLLWVLQTIA 126 Query: 123 IPSV--------IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ----DLLWVSPKSGGA 170 + I V EL LL +G+ L C T + S GG Sbjct: 127 GDATKDRNPSRNIMAAVVFFELKLLDLLGYRPGLEACRQCHGTALPAGESYHFSLAGGGL 186 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKS 204 +C + A + +LP L + A L + Sbjct: 187 ICPACNRQRASRHNLLPLSLATAKILAKAQELAN 220 >gi|268315979|ref|YP_003289698.1| DNA repair protein RecO [Rhodothermus marinus DSM 4252] gi|262333513|gb|ACY47310.1| DNA repair protein RecO [Rhodothermus marinus DSM 4252] Length = 254 Score = 69.0 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 4/154 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + +AI+L YGE ++I + TR GR + + R LQ + ++V + Sbjct: 1 MIVRTEAIVLRTLPYGETSLIASLFTRAKGRLSMMAKGARLPGSRFGGTLQPPSCLQVVF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 R + L + +L L +V L LP EP E ++ Sbjct: 61 YYRPTRELQTLSESSFAQYLPELGRDLEKLTLSLRMVELAHALLPPEEPMPEFFETFWQV 120 Query: 118 LNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTK 150 L P+ + +L L +GF + + Sbjct: 121 LARLDATPTRAWNLLPWFQLRLAAALGFAPRIER 154 >gi|171057287|ref|YP_001789636.1| DNA repair protein RecO [Leptothrix cholodnii SP-6] gi|170774732|gb|ACB32871.1| DNA repair protein RecO [Leptothrix cholodnii SP-6] Length = 256 Score = 69.0 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 12/157 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVR-VNWRSRLA 63 A +L + E ++ILE+ TR+ GR + + +++ +L + R+ Sbjct: 13 AYVLHHHDWSESSLILELFTRELGRISAVAKGAKRPYSQLRCVLLPFQRLNIALGSKRIE 72 Query: 64 QNLGEFRFEVLES----HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++L S + + L G+ L R L ++P L+D L Sbjct: 73 DG---AEVQLLRSAEWAGGGAMPGGAALLAGMHLNEILLRGLARQDPHPHLFDAYAATLP 129 Query: 120 CHKIPSVIG--KIFVQIELMLLKNIGFGLDLTKCVVT 154 P G E+ LL + G +L T Sbjct: 130 ALSGPDDAGVAAALRAFEIRLLSDSGVLPELHLVTAT 166 >gi|164686275|ref|ZP_02210305.1| hypothetical protein CLOBAR_02713 [Clostridium bartlettii DSM 16795] gi|164601877|gb|EDQ95342.1| hypothetical protein CLOBAR_02713 [Clostridium bartlettii DSM 16795] Length = 254 Score = 69.0 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 85/239 (35%), Gaps = 25/239 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L Y E ++IL + TR+ G+ + R + L + V L + Sbjct: 7 QGIVLRAVKYKENDLILTIFTRKLGKISAIAKGA--RRTKSALLSSCQVFAYSTFTLKKQ 64 Query: 66 LGEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +R E+++S +F Y I + + + L+ +L L Sbjct: 65 GNMYRVTQTEIIKSFYEISYDLDIFSYATYIIQLIDYNVEDEVTNNRLFILLAQTLYLLA 124 Query: 123 IPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLPY 179 + +F++ EL L+ IGF + +C G + + GG +C + Sbjct: 125 KEEI-DIVFIKDVFELKFLEYIGFKPIVNRCSNCGSKNLNNSVFNIYEGGVICENCRE-- 181 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 L++ ID ++ +L +Y LN L N L K+L+ Sbjct: 182 ----------LFEYNMKIDLTTI----RLMEYILNNDILTCNKAKVSKYIVKELDKILK 226 >gi|213691677|ref|YP_002322263.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254790513|sp|B7GQ05|RECO_BIFLI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|213523138|gb|ACJ51885.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457768|dbj|BAJ68389.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 239 Score = 69.0 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 9/178 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L E + I+ V+TR +G+ + + + + L+ V + Sbjct: 4 YRDEGVVLRTSKLAEADRIITVLTRDHGKIRAVAKGVRRTKSRFGARLEPFMRVDLLIAE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIF 117 R + + E + ++ A ++ IV L ERE + Y +L Sbjct: 64 GRSLDTVSQA--ESIAAYGAAIVGDYAAYEAANVIVETIDKLVGTERERMTDQYRLLIGA 121 Query: 118 LNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 LN + + + L G+ L CVV G ++S SGG +C + Sbjct: 122 LNALAKRAHAPQAIGCSYVMRALALAGWTPRLGTCVVCGAA-APAYLSIASGGVMCEA 178 >gi|325920675|ref|ZP_08182585.1| DNA replication and repair protein RecO [Xanthomonas gardneri ATCC 19865] gi|325548865|gb|EGD19809.1| DNA replication and repair protein RecO [Xanthomonas gardneri ATCC 19865] Length = 240 Score = 69.0 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRVNWRS 60 + +L VR + E ++++EV+T Q GR R + ++ LQ L++ Sbjct: 5 NERGFVLHVRPWRETSLLVEVLTEQQGRVGLLARGVHAPRKQALRAALQPLQLIQFTAMQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L + R + A L+ L G L R P +P EL+D Sbjct: 65 RGE--LAQLR-QAEALDTAPRLAGETMLAGFYISELLLRLAPRNDPVPELFDCYARARAH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + Q E +L +GF DL Sbjct: 122 LASNLPLAWGLRQFERDVLDGLGFAFDL 149 >gi|297590890|ref|ZP_06949528.1| recombination protein O [Staphylococcus aureus subsp. aureus MN8] gi|297575776|gb|EFH94492.1| recombination protein O [Staphylococcus aureus subsp. aureus MN8] gi|315195468|gb|EFU25855.1| putative recombination protein O [Staphylococcus aureus subsp. aureus CGS00] Length = 248 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ ++G + + ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L Sbjct: 60 KWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDVAPYNYQLLQ 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKYDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|227432224|ref|ZP_03914220.1| recombination protein O [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351997|gb|EEJ42227.1| recombination protein O [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 259 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 6/184 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR-SRLA 63 I+L R Y + ++++ ++T YG R + ++ Q +V + + Sbjct: 6 GIVLYTRQYKDNDLLVRILTETYGMRTFLARGAKKATSKLSAGTQPYTIVTFDGALPKRE 65 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 LG + ++ + ++L+ I L E E Y+ L + L Sbjct: 66 TGLGYMNDVQDIKVY-SRLIEDIEANAYAALIASLIDASFEEGEKITRWYNQLYVALQKL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL +G +L +TG S K G + + + Sbjct: 125 DEGLDPQIIANIFEIQLLVPLGVAPNLRADPITGQVDGKFDYSEKYNGIISENHFNLDDQ 184 Query: 182 KMLV 185 ++++ Sbjct: 185 RLML 188 >gi|78485081|ref|YP_391006.1| DNA repair protein RecO [Thiomicrospira crunogena XCL-2] gi|78363367|gb|ABB41332.1| DNA replication and repair protein RecO [Thiomicrospira crunogena XCL-2] Length = 246 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 23/160 (14%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH-----RMQPILQAGNLVRV 56 + A +L R Y E ++++ T ++G+ ++ +S Q LQ + + Sbjct: 4 DIEQQAFVLHRRPYRETSLLVTFFTPEFGKQNAVIKGVRSSSKTAQAKQAWLQPFQGLNI 63 Query: 57 NWRS---RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--- 110 +WR R + + + E L + GL L+R L L Sbjct: 64 SWRDKANRSSDLVSLRQLEPNHVRFP--LGGEGSICGLYLNELLYRLL-----YPSLEVS 116 Query: 111 -----YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFG 145 Y L + + Q E LL +G+ Sbjct: 117 GLFGEYQQALYDLALAEDRYQQAWVLRQFEFALLSELGYA 156 >gi|315640638|ref|ZP_07895744.1| recombination protein O [Enterococcus italicus DSM 15952] gi|315483666|gb|EFU74156.1| recombination protein O [Enterococcus italicus DSM 15952] Length = 257 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 6/174 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG--NLVRVNWRSR 61 + +IL +++ EK+ ++++ T G+ + +VR + P LQ + S+ Sbjct: 5 ESKGLILFAKNHKEKDKLVKIFTESAGKQMFYVRGAH-RKNNP-LQPAIMPFTEATYISQ 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ F H + L +FL Y + + +R LY L L+ Sbjct: 63 FSEQGLSFLHAAKHIHPFRHLQEDIFLAGYATYLLNLADAAIEDRVYDPHLYQFLKEALH 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 I E+ +L+ G + C + G T S K G +C Sbjct: 123 FIDEGKDAEIITNIFEVQVLQRFGVQFEWQHCAICGETHGKFDFSSKYSGVLCE 176 >gi|269956964|ref|YP_003326753.1| DNA repair protein RecO [Xylanimonas cellulosilytica DSM 15894] gi|269305645|gb|ACZ31195.1| DNA repair protein RecO [Xylanimonas cellulosilytica DSM 15894] Length = 258 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 8/182 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR- 59 ++DDAI+L GE + I+ ++TR+ G+ G + + S R L+ +V V Sbjct: 13 YRDDAIVLRTHKLGEADRIVTLLTRENGKVRGVAKGVRRTSSRFGARLEPFMVVDVQLHV 72 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFL-PEREPCLELYDMLNIF 117 R + + E + ++ + L+ G + R + EREP ++ Y +L Sbjct: 73 GRSLDTV--TQVETIGAYARTICEDYVLYTAGAPMLEAADRLVEAEREPAVQQYWLLAGA 130 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + L L G+ T C G S +GGAVC Sbjct: 131 LRALAQRDHAPSLVLDSYLLRALAVAGWAPSFTDCARCGEPGPHHSFSVATGGAVCSRCR 190 Query: 177 LP 178 P Sbjct: 191 PP 192 >gi|78046935|ref|YP_363110.1| DNA repair protein RecO [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325926992|ref|ZP_08188267.1| DNA replication and repair protein RecO [Xanthomonas perforans 91-118] gi|90103527|sp|Q3BVV3|RECO_XANC5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78035365|emb|CAJ23010.1| putative DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542651|gb|EGD14118.1| DNA replication and repair protein RecO [Xanthomonas perforans 91-118] Length = 240 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 10/150 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVNWRS 60 + +L VR++ E ++++EV+T Q+GR R Q R ++ LQ L++ + Sbjct: 5 HERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQFSAVQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD--MLNIFL 118 R L + R + A L L G L R P +P ELY Sbjct: 65 RGE--LAQLR-QAEALDTAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYAQARTY 121 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 +P G + E +L +GF DL Sbjct: 122 LASDLPLAWG--LRRFERDVLDGLGFAFDL 149 >gi|330937655|gb|EGH41560.1| DNA repair protein RecO [Pseudomonas syringae pv. pisi str. 1704B] Length = 199 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A + R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVSHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALSLG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|116617892|ref|YP_818263.1| DNA replication and repair protein RecO [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271907|sp|Q03Y32|RECO_LEUMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116096739|gb|ABJ61890.1| DNA replication and repair protein RecO [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 259 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 6/172 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR-SRLA 63 I+L R Y + ++++ ++T YG R + ++ Q +V + + Sbjct: 6 GIVLYTRQYKDNDLLVRILTETYGMRTFLARGAKKATSKLSAGTQPYTIVTFDGALPKRE 65 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCH 121 LG + ++ + ++L+ I L E E Y+ L + L Sbjct: 66 TGLGYMNDVQDIKVY-SRLIEDIEANAYAALIASLIDASFEEGEKITRWYNQLYVALQKL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 I E+ LL +G +L +TG S K G + Sbjct: 125 DEGLDPQIIANIFEIQLLVPLGVAPNLRADPITGQVDGKFDYSEKYNGIISE 176 >gi|194366745|ref|YP_002029355.1| DNA repair protein RecO [Stenotrophomonas maltophilia R551-3] gi|238693485|sp|B4SRK8|RECO_STRM5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194349549|gb|ACF52672.1| DNA repair protein RecO [Stenotrophomonas maltophilia R551-3] Length = 239 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 85/239 (35%), Gaps = 27/239 (11%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRV 56 M +DD +L R+Y E ++++EV++ Q+GR R + + ++ LQ +R Sbjct: 1 MLIEDDTGFVLHARAYRETSLLVEVLSAQHGRIGVLARGVSTAKGQVLRAALQPLQWIRF 60 Query: 57 N--WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + R LAQ G + A L L G R P ++P ELY Sbjct: 61 SALQRGELAQLRGAEALD-----AAPRLVGQAMLAGFYLSELTLRLAPRQDPLPELYLAY 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW---VSPKSG--G 169 + + + + E LL ++G G +L G D + P+ G Sbjct: 116 GEARARLGVGAGLAWTLRRFERELLTSLGLGFELDS-ASDGQPIDPAARYELDPQEGAQR 174 Query: 170 AVCRSVGLPYAE----KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIH 224 + G A +L L ++ DA L S L + L + Sbjct: 175 LLSERAGERRAAATGSALLAL-----AADEEPDAADLASLRLPMRRVLAHH-LGPRGLK 227 >gi|319945960|ref|ZP_08020210.1| recombination protein O [Streptococcus australis ATCC 700641] gi|319748025|gb|EFW00269.1| recombination protein O [Streptococcus australis ATCC 700641] Length = 259 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 2/170 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + I+L R Y E + ++++ T Q G+ + FV++ R+ ++Q L + + Sbjct: 6 ESRGIVLYHRDYREDDKLVKIFTEQAGKLMFFVKHANRSRLNSMIQPLTLADMYLKI-TD 64 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L ++S Y + + +R+P L+ L L Sbjct: 65 DGLSYIEDIHEVQSFQGINQDLFRLSYATYILALADASIQDRQPDPALFAFLEQTLQLMD 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + E+ +L G L++ +C V S + GG +C Sbjct: 125 RGLDYEILTNIFEMQILSRFGVALNVHECCVCHRVGLPFDFSFRLGGVLC 174 >gi|119361493|sp|Q2LVI1|RECO_SYNAS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 259 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 3/154 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRSR 61 + + +L SY + ++I+ TR +G+ R + R + +L+ + + + Sbjct: 8 KTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARGARKSRKRFVNVLEPFCCSSLLFSRK 67 Query: 62 LAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L +V+ S L I + F E +P EL+++L FL Sbjct: 68 QRDQLAWLESCQVINEFPEIRKSLDRTLLASYLIDLVDHFSIEEKPGRELFELLRSFLLL 127 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + ++ E+ LK G+ L C++ Sbjct: 128 IEEGDTSERLLRFFEIRHLKLTGYAPALDCCMIC 161 >gi|308234875|ref|ZP_07665612.1| DNA repair protein RecO [Gardnerella vaginalis ATCC 14018] Length = 244 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 18/182 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 + D+A++L GE + I+ ++T+++G+ + + + + L+ V + Sbjct: 4 YNDEAVVLKTFPLGEADRIVVMLTKKHGKIRAVAKGVRKIKSRFGARLEPFMRVNALFAT 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-----LFRFLPEREPCLELYDML 114 R + + VL S A+ + + LY S++ L + + Y++L Sbjct: 64 GRTFDVVSQA---VLVSAYAESICADYDLYSRASMIAEIADDLVSSSAQYQDSCMQYNLL 120 Query: 115 NIFLNC----HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L+ IG +V L LK G+ L +CVV DL + S SGG Sbjct: 121 VAALSALSRGLHSADSIGFSYV---LRALKLAGWSPMLNECVVCATKDDLSYFSSCSGGV 177 Query: 171 VC 172 +C Sbjct: 178 MC 179 >gi|311114387|ref|YP_003985608.1| recombination protein O [Gardnerella vaginalis ATCC 14019] gi|310945881|gb|ADP38585.1| recombination protein O [Gardnerella vaginalis ATCC 14019] Length = 247 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 18/182 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 + D+A++L GE + I+ ++T+++G+ + + + + L+ V + Sbjct: 7 YNDEAVVLKTFPLGEADRIVVMLTKKHGKIRAVAKGVRKIKSRFGARLEPFMRVNALFAT 66 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-----LFRFLPEREPCLELYDML 114 R + + VL S A+ + + LY S++ L + + Y++L Sbjct: 67 GRTFDVVSQA---VLVSAYAESICADYDLYSRASMIAEIADDLVSSSAQYQDSCMQYNLL 123 Query: 115 NIFLNC----HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L+ IG +V L LK G+ L +CVV DL + S SGG Sbjct: 124 VAALSALSRGLHSADSIGFSYV---LRALKLAGWSPMLNECVVCATKDDLSYFSSCSGGV 180 Query: 171 VC 172 +C Sbjct: 181 MC 182 >gi|83589465|ref|YP_429474.1| DNA replication and repair protein RecO [Moorella thermoacetica ATCC 39073] gi|119361465|sp|Q2RKV8|RECO_MOOTA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83572379|gb|ABC18931.1| DNA replication and repair protein RecO [Moorella thermoacetica ATCC 39073] Length = 267 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 15/184 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 +Q + I+L R Y E + +L ++TR +G+ V+ + + L++G RSR Sbjct: 5 FQAEGIVLKSRDYQETDQLLTILTRTHGKLEAIVKGV--RKPRSSLRSGTQQLC--RSRF 60 Query: 63 ----AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++L EV E + Y + + + +Y +L Sbjct: 61 LFYAGKSLATVTQCEVQEIYGPLRQDLKRLAYAYYLVEIADGVVMPGQVNQAMYLLLQQG 120 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCR 173 L + + + E LK +G L C + + ++P +GGA+C Sbjct: 121 LEALGE--LEPALVARAFEARTLKLLGLAPRLEACALCQRELKGNGRVAIAPAAGGALCP 178 Query: 174 SVGL 177 Sbjct: 179 ECRG 182 >gi|20532223|sp|Q8XIU9|RECO_CLOPE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 246 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 17/183 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQA---GNLVRVNWRS- 60 +I+ + Y E + +L + T + G+ + + + + + G+ + + Sbjct: 8 GVIIKAQDYKENDKLLWIFTEKMGKITAIAKGAKKSKSKLFSLTHPLCYGDYLLFKGKGL 67 Query: 61 -RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 RL++ + + L+ L Y + L + E LY L Sbjct: 68 YRLSEGK-------IRTSFQTSLTDLEKLTYASYLCELIDISLQDEEENFNLYKEFITCL 120 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSVG 176 ++ ++ ++ EL LLK G+GL CV + ++S + G VC Sbjct: 121 YLINTEAISYELLIRAFELKLLKYTGYGLRFDNCVFCKNKLSVSNYISLRYFGGVCDKCP 180 Query: 177 LPY 179 + Sbjct: 181 KEH 183 >gi|257869128|ref|ZP_05648781.1| DNA repair protein recO [Enterococcus gallinarum EG2] gi|257803292|gb|EEV32114.1| DNA repair protein recO [Enterococcus gallinarum EG2] Length = 260 Score = 68.6 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 20/179 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG--NLVRVNWRSRLAQ 64 I+L R + EK+ ++++ T G+ + +V+ + P L + + Sbjct: 10 GILLFTRDHKEKDKLVKIFTESAGKQMFYVKGAH-RKNNP-LTPALLSYTEATY------ 61 Query: 65 NLGEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLN 115 +G R E L + H + + +FL Y + + +R LY L+ Sbjct: 62 -IGNIRSEGLSFLNNAKDIHSFRKIQGDIFLAGYATYLLNLADSAIDDRVYDPNLYHFLH 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + I E+ LL+ G T C V G T+ S K G +C Sbjct: 121 EALQLMDTDNDAEIITNIFEIQLLQRFGVSPIWTHCAVCGQTEGRFDYSSKYNGVICEK 179 >gi|21242080|ref|NP_641662.1| DNA repair protein RecO [Xanthomonas axonopodis pv. citri str. 306] gi|42559487|sp|Q8PMU8|RECO_XANAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|21107487|gb|AAM36198.1| DNA repair protein [Xanthomonas axonopodis pv. citri str. 306] Length = 240 Score = 68.6 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVNWRS 60 + +L VR++ E ++++EV+T Q+GR R Q R ++ LQ L++ + Sbjct: 5 HERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQFSAVQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L + R + A L+ L G L R P +P ELY Sbjct: 65 RGE--LAQLR-QAEALDTAPRLAGDTMLAGFYIGELLLRLAPRHDPVPELYACYAQARRH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +L+ +GF DL Sbjct: 122 LASDLPLAWGLRRFERDVLEGLGFAFDL 149 >gi|69247286|ref|ZP_00604287.1| Recombination protein O, RecO [Enterococcus faecium DO] gi|257879931|ref|ZP_05659584.1| recombination protein O [Enterococcus faecium 1,230,933] gi|258616602|ref|ZP_05714372.1| DNA repair protein RecO, putative [Enterococcus faecium DO] gi|261208623|ref|ZP_05923060.1| recombination protein O [Enterococcus faecium TC 6] gi|289566738|ref|ZP_06447152.1| DNA repair protein RecO [Enterococcus faecium D344SRF] gi|294616319|ref|ZP_06696112.1| DNA repair protein RecO [Enterococcus faecium E1636] gi|68194908|gb|EAN09378.1| Recombination protein O, RecO [Enterococcus faecium DO] gi|257814159|gb|EEV42917.1| recombination protein O [Enterococcus faecium 1,230,933] gi|260077125|gb|EEW64845.1| recombination protein O [Enterococcus faecium TC 6] gi|289161459|gb|EFD09345.1| DNA repair protein RecO [Enterococcus faecium D344SRF] gi|291590833|gb|EFF22549.1| DNA repair protein RecO [Enterococcus faecium E1636] Length = 270 Score = 68.6 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 70/182 (38%), Gaps = 20/182 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQA-------GNLV 54 + +IL R+Y EK+ ++++ T G+ + +++ Q+ + P L GN Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVYIGNF- 64 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYD 112 L++ L V + H + + +FL YG + + + + + L+ Sbjct: 65 -------LSEGLSFLSS-VKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQ 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 117 FTQQALQRMDQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVIC 176 Query: 173 RS 174 Sbjct: 177 EK 178 >gi|284990196|ref|YP_003408750.1| DNA repair protein RecO [Geodermatophilus obscurus DSM 43160] gi|284063441|gb|ADB74379.1| DNA repair protein RecO [Geodermatophilus obscurus DSM 43160] Length = 263 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 12/178 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D+ I+L + GE + I+ V+TR++G+ + + + + L+ + V + + Sbjct: 9 YRDEGIVLRTQKLGEADRIVTVLTRRHGKVRAVAKGVRRTKSKFGARLEPFSHVDLQFYT 68 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIF 117 R + + E + ++ +++ + G + R E EP L L+ ++ Sbjct: 69 GRTLDIVSQA--ESIRAYGQSIVTDYPAYTAGTAVLETADRLTAEEKEPSLRLFLLVIGA 126 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + + + LL+ + G+ L C G S +GG VC Sbjct: 127 LRALSERTHPAGLVL--DAFLLRAMSVAGWEPALGGCARCGEEGPHRHFSVPAGGMVC 182 >gi|300768137|ref|ZP_07078042.1| recombination protein O [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494201|gb|EFK29364.1| recombination protein O [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 262 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 12/189 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQA---GNLV-RVNWRS 60 I+L R Y E++++++ +T +YG+ + F+R + +M L G V + Sbjct: 11 GILLFRRDYRERDMLIKFLTAEYGKKMFFIRGARRRGFKMAAELLPFTMGEYVGDLR--- 67 Query: 61 RLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 Q L + ++ +L Y + + P+ +P Y L L Sbjct: 68 --DQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDVAFPDNQPVGRWYQQLTSALQ 125 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +E+ LL+ G +L C V G + L S GG +C+ Sbjct: 126 LIDQDVAPALVANVVEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLLCQQHWHLD 185 Query: 180 AEKMLVLPS 188 ++ P+ Sbjct: 186 PHRLHASPA 194 >gi|85860059|ref|YP_462261.1| DNA repair protein [Syntrophus aciditrophicus SB] gi|85723150|gb|ABC78093.1| DNA repair protein [Syntrophus aciditrophicus SB] Length = 277 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 3/154 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRSR 61 + + +L SY + ++I+ TR +G+ R + R + +L+ + + + Sbjct: 26 KTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARGARKSRKRFVNVLEPFCCSSLLFSRK 85 Query: 62 LAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L +V+ S L I + F E +P EL+++L FL Sbjct: 86 QRDQLAWLESCQVINEFPEIRKSLDRTLLASYLIDLVDHFSIEEKPGRELFELLRSFLLL 145 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + ++ E+ LK G+ L C++ Sbjct: 146 IEEGDTSERLLRFFEIRHLKLTGYAPALDCCMIC 179 >gi|167767682|ref|ZP_02439735.1| hypothetical protein CLOSS21_02217 [Clostridium sp. SS2/1] gi|317499139|ref|ZP_07957416.1| DNA repair protein RecO [Lachnospiraceae bacterium 5_1_63FAA] gi|167710699|gb|EDS21278.1| hypothetical protein CLOSS21_02217 [Clostridium sp. SS2/1] gi|291560816|emb|CBL39616.1| DNA replication and repair protein RecO [butyrate-producing bacterium SSC/2] gi|316893552|gb|EFV15757.1| DNA repair protein RecO [Lachnospiraceae bacterium 5_1_63FAA] Length = 240 Score = 68.2 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 8/179 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-W 58 + ++L + GE + + ++T++ GR F R + Q Q + + Sbjct: 4 EIKVTGMVLQAGNIGEYDKRIVLLTKERGRISAFARGAKKATSQYAAACQPFTFGEFSLY 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 + + NL E ++ L +Y L +L E LE+ +L Sbjct: 64 EGKNSFNLMWAGVE---NYFDTLKKDLDLIYYASYFCELASYLTRENNDELEILKLLYQT 120 Query: 118 LNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + ++ ++ E+ +L G G++ ++CV G +DL+W + G VC Sbjct: 121 LRALEKKTIDIELVRCIYEIKILALYGIGIEASRCVKCGSREDLIWFDARESGVVCNKC 179 >gi|323440464|gb|EGA98176.1| recombination protein [Staphylococcus aureus O11] gi|323443238|gb|EGB00856.1| recombination protein [Staphylococcus aureus O46] Length = 248 Score = 68.2 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ ++G + + ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L+ Sbjct: 60 QWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLD 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|239996016|ref|ZP_04716540.1| DNA repair protein RecO [Alteromonas macleodii ATCC 27126] Length = 237 Score = 68.2 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 18/156 (11%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 W + A +L R Y E + I++ T + GR + ++ + + +LQ +R+ Sbjct: 4 EWLN-AYVLHRRPYRETSYIVDFFTLEEGRVSAVAKGVKNSKSDKKSLLQPFQHLRLQLS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDM 113 + E+ + +S S+ L G ++ R +P +++ Sbjct: 63 GKS---------ELKNLRHVESVSPSINLVGTALFCAMYVNELTNRVMPAGLASDGVHNA 113 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 L + I Q E LL +G D T Sbjct: 114 YENALLSLRDECDIEVTLRQFEFALLDEMGLLPDFT 149 >gi|190575412|ref|YP_001973257.1| DNA repair protein RecO [Stenotrophomonas maltophilia K279a] gi|229485574|sp|B2FPX7|RECO_STRMK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190013334|emb|CAQ46968.1| putative DNA repair protein RecO [Stenotrophomonas maltophilia K279a] Length = 239 Score = 68.2 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 18/159 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M D +L R+Y E ++++EV++ Q+GR R + + ++ LQ +R + Sbjct: 2 MIEDDTGFVLHARAYRETSLLVEVLSAQHGRVGLLARGVSTAKGQVLRAALQPLQWIRFS 61 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSS------LFLYGLQSIVPLFRFLPEREPCLELY 111 AQ G E+ + A+ L ++ L G R P ++P ELY Sbjct: 62 -----AQQRG----ELAQLRGAEALDAAPRLVGQAMLAGFYLSELTLRLAPRQDPLPELY 112 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 + + + + E LL +G G +L Sbjct: 113 LAYGEARARLAVGAGLAWTLRRFERELLTALGLGFELDS 151 >gi|312437965|gb|ADQ77036.1| recombination protein O [Staphylococcus aureus subsp. aureus TCH60] Length = 248 Score = 68.2 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ + R ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEYGAKVPLMAR--RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L Sbjct: 60 KWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDVAPYNYQLLQ 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKYDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|28378609|ref|NP_785501.1| DNA repair protein RecO [Lactobacillus plantarum WCFS1] gi|254556824|ref|YP_003063241.1| DNA repair protein RecO [Lactobacillus plantarum JDM1] gi|38258515|sp|Q88VS1|RECO_LACPL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28271445|emb|CAD64350.1| DNA repair protein RecO [Lactobacillus plantarum WCFS1] gi|254045751|gb|ACT62544.1| DNA repair protein RecO [Lactobacillus plantarum JDM1] Length = 258 Score = 68.2 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 12/189 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQA---GNLV-RVNWRS 60 I+L R Y E++++++ +T +YG+ + F+R + +M L G V + Sbjct: 7 GILLFRRDYRERDMLIKFLTAEYGKKMFFIRGARRRGFKMAAELLPFTMGEYVGDLR--- 63 Query: 61 RLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 Q L + ++ +L Y + + P+ +P Y L L Sbjct: 64 --DQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDVAFPDNQPVGRWYQQLTSALQ 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +E+ LL+ G +L C V G + L S GG +C+ Sbjct: 122 LIDQDVAPALVANVVEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLLCQQHWHLD 181 Query: 180 AEKMLVLPS 188 ++ P+ Sbjct: 182 PHRLHASPA 190 >gi|221632230|ref|YP_002521451.1| DNA repair protein RecO [Thermomicrobium roseum DSM 5159] gi|221155865|gb|ACM04992.1| DNA repair protein RecO [Thermomicrobium roseum DSM 5159] Length = 278 Score = 68.2 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 25/187 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ---SH---------RMQPILQA 50 ++ +AI+L R GE + IL + T + G+ + + S R Q +L Sbjct: 18 YRTEAIVLRRRDLGEADRILTLFTPKAGKLRVIAKGIRRPQSRLAGHLDLFVRTQVLLAR 77 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 G + + +++L + R E + A L+ R + +P L Sbjct: 78 GRELDIVTQAQLVEPFTGLRREPWRAGWAGYLADLT-----------DRATVDEDPQPAL 126 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSG 168 YD+L L + + E+ LL +G+ +L C G +T L +P G Sbjct: 127 YDLLLECLRLLAELPDPFAVVRRFEMRLLVLLGYQPELVVCPHCGKQLTPGRLAFAPDHG 186 Query: 169 GAVCRSV 175 G +C Sbjct: 187 GILCGEC 193 >gi|221135231|ref|ZP_03561534.1| DNA repair protein RecO [Glaciecola sp. HTCC2999] Length = 242 Score = 68.2 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 67/176 (38%), Gaps = 29/176 (16%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L R+Y E + ++++++ + G+ R +S + + +LQ + + Sbjct: 11 GFVLHRRAYQESSFLVDILSLEAGKIRCVARGMRSAKSDRKSVLQPFQPIACELTGKS-- 68 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLEL----YDML 114 E+ A+ S+ L G+ + R LP PC ++ Y+ L Sbjct: 69 -------ELKSVKNAENTDKSIPLQHTSLFCGMYLNELINRVLPSNIPCPDIVNDYYETL 121 Query: 115 NIFLNCHKIPSVIGKI----FVQIELMLLKNIGFGLDLTKCVV---TGVTQDLLWV 163 K S + EL LL +G+ DL+ C V T + D+ +V Sbjct: 122 KQLHTSQKFNSTLQPHQEAQLRCFELNLLAELGYLPDLS-CEVRTQTAIEDDMDYV 176 >gi|169351080|ref|ZP_02868018.1| hypothetical protein CLOSPI_01859 [Clostridium spiroforme DSM 1552] gi|169292142|gb|EDS74275.1| hypothetical protein CLOSPI_01859 [Clostridium spiroforme DSM 1552] Length = 250 Score = 68.2 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 75/183 (40%), Gaps = 9/183 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVRVNWRS 60 + ++L + Y E ++++ + T+ YG+ R + + P Q G + R Sbjct: 12 EGLVLKNKPYKESDMLVWIYTKTYGKMALIARGVKKMKSKNAPACQTISLGEYL-FIPRK 70 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L+ + V++ L Y I +++++ + +P E Y+ L + L Sbjct: 71 GLST---LIKGSVIDYFVHIKEDIELEAYASYFIEYVYKYILDNDPDEECYNNLLLALKY 127 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +++ +LK G L++ +C V G + + +S SGG VC+ Y Sbjct: 128 LNSGYDPRLVYLLFNAYILKATGCALEVEQCSVCGDSSHIAGISISSGGFVCKECLGMYD 187 Query: 181 EKM 183 ++ Sbjct: 188 MRL 190 >gi|34497524|ref|NP_901739.1| DNA repair protein RecO [Chromobacterium violaceum ATCC 12472] gi|42559446|sp|Q7NWC1|RECO_CHRVO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|34103379|gb|AAQ59741.1| DNA repair protein [Chromobacterium violaceum ATCC 12472] Length = 245 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 60/155 (38%), Gaps = 17/155 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + IL + Y E +++LEV++R +GR R+ + R ++ +L + ++W + Sbjct: 9 KQPGYILHTQPYRETSLLLEVLSRDHGRFSLVARSARRPRSDLRGVLLPFQPLTLSWFGK 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP------LFRFLPEREPCLELYDMLN 115 E+ H A L GL + + + +P + + + Sbjct: 69 ---------GELRTLHAADWDGGVRALTGLPLVCGFYLNELMMKLTARDDPEPRAFSVYD 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 + + + + EL L + +G+ L++ Sbjct: 120 RAVRELAGGAPLSTALRRYELRLAQVLGYAPALSR 154 >gi|257890446|ref|ZP_05670099.1| recombination protein O [Enterococcus faecium 1,231,410] gi|294618703|ref|ZP_06698236.1| DNA repair protein RecO [Enterococcus faecium E1679] gi|257826806|gb|EEV53432.1| recombination protein O [Enterococcus faecium 1,231,410] gi|291595046|gb|EFF26390.1| DNA repair protein RecO [Enterococcus faecium E1679] Length = 270 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ Q+ + P L Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVY----- 60 Query: 62 LAQNLGEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYD 112 +G FR E L + H + + +FL YG + + + + + L+ Sbjct: 61 ----IGNFRSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQ 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 117 FTQQALQRMDQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVIC 176 Query: 173 RS 174 Sbjct: 177 EK 178 >gi|260061484|ref|YP_003194564.1| DNA repair protein [Robiginitalea biformata HTCC2501] gi|88785616|gb|EAR16785.1| DNA repair protein [Robiginitalea biformata HTCC2501] Length = 239 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 7/153 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQP-ILQAGNLVR- 55 M AI+L YGE ++I+ + T GR ++ R ++P Q + Sbjct: 1 MPTSTKAIVLSSLKYGESSLIVRMYTEASGRQTYMLKGILKRRKGGLRPGFFQPLTQLEI 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDML 114 V+ R LG R ++ A + S L L + E E EL+ L Sbjct: 61 VSGTVR-PGRLGYLREALIAYPYATVHSDIRKGAIALFLSEVLSESIREEETNPELFSYL 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L I ++ + L + +GF D Sbjct: 120 EHTLQWLDQHQRIANFHIRFLMGLTRYLGFYPD 152 >gi|257865834|ref|ZP_05645487.1| recombination protein O [Enterococcus casseliflavus EC30] gi|257872169|ref|ZP_05651822.1| recombination protein O [Enterococcus casseliflavus EC10] gi|257875462|ref|ZP_05655115.1| recombination protein O [Enterococcus casseliflavus EC20] gi|257799768|gb|EEV28820.1| recombination protein O [Enterococcus casseliflavus EC30] gi|257806333|gb|EEV35155.1| recombination protein O [Enterococcus casseliflavus EC10] gi|257809628|gb|EEV38448.1| recombination protein O [Enterococcus casseliflavus EC20] Length = 257 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 67/177 (37%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 I+L + + EK+ ++++ T G+ + +V+ + P+ +++ A + Sbjct: 8 GILLFSKDHKEKDKLVKIFTESAGKQMFYVKGAH-RKNNPL----APALLSYTE--ATYM 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNIF 117 G + E L + H + + S +F+ Y + + +R LY L+ Sbjct: 61 GTIKTEGLSFLNNAKDIHPFRTIQSDIFIAGYATYLLNLADSAIDDRVYDPHLYQFLHEA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + I E+ +L G + T C + G T S K G +C Sbjct: 121 LQLMDQENDAEIITNIFEIQILHRFGITPNWTHCAICGKTDGRFDYSSKYSGILCEQ 177 >gi|257898047|ref|ZP_05677700.1| recombination protein O [Enterococcus faecium Com15] gi|257835959|gb|EEV61033.1| recombination protein O [Enterococcus faecium Com15] Length = 270 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ Q+ + P L Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVY----- 60 Query: 62 LAQNLGEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYD 112 +G FR E L + H + + +FL YG + + + + + L+ Sbjct: 61 ----IGNFRSEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQ 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 117 FTQQALQRMDQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVIC 176 Query: 173 R 173 Sbjct: 177 E 177 >gi|257886867|ref|ZP_05666520.1| recombination protein O [Enterococcus faecium 1,141,733] gi|293568653|ref|ZP_06679968.1| DNA repair protein RecO [Enterococcus faecium E1071] gi|293571623|ref|ZP_06682644.1| DNA repair protein RecO [Enterococcus faecium E980] gi|257822921|gb|EEV49853.1| recombination protein O [Enterococcus faecium 1,141,733] gi|291588613|gb|EFF20446.1| DNA repair protein RecO [Enterococcus faecium E1071] gi|291608293|gb|EFF37594.1| DNA repair protein RecO [Enterococcus faecium E980] Length = 272 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ Q+ + P L Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVY----- 60 Query: 62 LAQNLGEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYD 112 +G FR E L + H + + +FL YG + + + + + L+ Sbjct: 61 ----IGNFRSEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQ 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 117 FTQQALQRMDQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVIC 176 Query: 173 R 173 Sbjct: 177 E 177 >gi|313500337|gb|ADR61703.1| RecO [Pseudomonas putida BIRD-1] Length = 227 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 5/143 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ T Q GR +R + + +++ + V R R Sbjct: 8 PAYVLHSRAYKETSALVDFFTPQ-GRMRAVLRRARG-KGGSLVRPFVSLEVELRGRGE-- 63 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L A L +LF GL L R LP P L++ + L Sbjct: 64 LKNVSRMDSTGIAAWLHGDALF-SGLYLNELLMRLLPAEAPFPALFEHYTLTLQALSAGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDL 148 + + E LL +G+ L Sbjct: 123 PLEPLLRSFEWRLLDELGYAFSL 145 >gi|320548079|ref|ZP_08042359.1| recombination protein O [Streptococcus equinus ATCC 9812] gi|320447321|gb|EFW88084.1| recombination protein O [Streptococcus equinus ATCC 9812] Length = 251 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 7/208 (3%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R+Y E + ++++ T G+H+ FVR+ R ++Q L + Sbjct: 1 MQTKETYGLVLYNRNYREDDKLVKIFTETDGKHMFFVRHAGKSRFNSVIQP--LTIAKFI 58 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 ++ N F + E K +++ L L + L +P+ +L+ LN Sbjct: 59 VKINDNGLSFIEDYKEVASFKEINADLFKLSYASYVTSLADAAVPDNVADSQLFAFLNKT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + E+ +L+ G L+L +C S K G +C Sbjct: 119 LSLMEEGLDYEILTNIFEIQILERFGISLNLHECAFCHRVGLPFDFSHKYTGLLCPEHYA 178 Query: 178 PYAEKMLVLPS--FLWKEEQTIDADSLK 203 + V P+ +L Q I D LK Sbjct: 179 KDEHRSHVDPNMLYLLDRFQAIQFDELK 206 >gi|307710078|ref|ZP_07646522.1| DNA repair protein RecO [Streptococcus mitis SK564] gi|307619058|gb|EFN98190.1| DNA repair protein RecO [Streptococcus mitis SK564] Length = 256 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 8/205 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ ++Q LV + R+ Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLASVIQP--LVLARFLLRIN 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + E ++S L Y L + + L+ L L Sbjct: 64 DDGLSYIE-DYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLEL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + E+ +L G L+ +CV S K G +C Sbjct: 123 MEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDE 182 Query: 181 E--KMLVLPSFLWKEEQTIDADSLK 203 + +L + Q ID ++L+ Sbjct: 183 RCCHLNPNIPYLLNQFQAIDFETLE 207 >gi|257882781|ref|ZP_05662434.1| recombination protein O [Enterococcus faecium 1,231,502] gi|257884089|ref|ZP_05663742.1| recombination protein O [Enterococcus faecium 1,231,501] gi|294622999|ref|ZP_06701888.1| DNA repair protein RecO [Enterococcus faecium U0317] gi|257818439|gb|EEV45767.1| recombination protein O [Enterococcus faecium 1,231,502] gi|257819927|gb|EEV47075.1| recombination protein O [Enterococcus faecium 1,231,501] gi|291597555|gb|EFF28717.1| DNA repair protein RecO [Enterococcus faecium U0317] Length = 270 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ Q+ + P L Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVY----- 60 Query: 62 LAQNLGEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYD 112 +G FR E L + H + + +FL YG + + + + + L+ Sbjct: 61 ----IGNFRSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQ 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 117 FTQQALQRMDQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVIC 176 Query: 173 R 173 Sbjct: 177 E 177 >gi|298694848|gb|ADI98070.1| probable recombination protein [Staphylococcus aureus subsp. aureus ED133] Length = 248 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ ++G + + ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L Sbjct: 60 QWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQ 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|148268050|ref|YP_001246993.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus JH9] gi|150394118|ref|YP_001316793.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus JH1] gi|253316041|ref|ZP_04839254.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732219|ref|ZP_04866384.1| recombination protein RecO [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733184|ref|ZP_04867349.1| recombination protein RecO [Staphylococcus aureus subsp. aureus TCH130] gi|255006352|ref|ZP_05144953.2| DNA repair protein RecO [Staphylococcus aureus subsp. aureus Mu50-omega] gi|269203194|ref|YP_003282463.1| RecO family DNA repair protein [Staphylococcus aureus subsp. aureus ED98] gi|296275812|ref|ZP_06858319.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus MR1] gi|147741119|gb|ABQ49417.1| DNA replication and repair protein RecO [Staphylococcus aureus subsp. aureus JH9] gi|149946570|gb|ABR52506.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus JH1] gi|253724008|gb|EES92737.1| recombination protein RecO [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728724|gb|EES97453.1| recombination protein RecO [Staphylococcus aureus subsp. aureus TCH130] gi|262075484|gb|ACY11457.1| RecO family DNA repair protein [Staphylococcus aureus subsp. aureus ED98] gi|312829954|emb|CBX34796.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129844|gb|EFT85834.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus CGS03] Length = 248 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ ++G + + ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L Sbjct: 60 QWRG-----MGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQ 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|19553482|ref|NP_601484.1| DNA repair protein RecO [Corynebacterium glutamicum ATCC 13032] gi|62391125|ref|YP_226527.1| DNA repair protein RecO [Corynebacterium glutamicum ATCC 13032] gi|21325055|dbj|BAB99677.1| Recombinational DNA repair protein [Corynebacterium glutamicum ATCC 13032] gi|41326464|emb|CAF20626.1| Recombinational DNA repair protein (RecF pathway) [Corynebacterium glutamicum ATCC 13032] Length = 242 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 7/180 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 ++D A+++ +GE + I+ ++TR +G G + + + + LQ + V + Sbjct: 6 FRDRALVVKTYDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYP 65 Query: 60 SR-LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R L+ G S + + + I L E +P L++ L Sbjct: 66 GRKLSTISGADTVGYYASGIIEDFTRYSCASAILEIATHIAGL-ENDPH--LFEETTRAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + L + + G+ L C G P GGAVC P Sbjct: 123 KNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGRPGPHNAFHPGVGGAVCLYCRPP 182 >gi|169830679|ref|YP_001716661.1| DNA repair protein RecO [Candidatus Desulforudis audaxviator MP104C] gi|238688218|sp|B1I1S7|RECO_DESAP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169637523|gb|ACA59029.1| DNA repair protein RecO [Candidatus Desulforudis audaxviator MP104C] Length = 249 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 63/179 (35%), Gaps = 9/179 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW- 58 +Q +AI+L + E + L ++TR G+ + + R + +Q R Sbjct: 3 QYQTEAIVLRASAVREADRTLVLLTRDRGKLRVWAHGAARPTSRKRGAVQPFCRSRFLLE 62 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIF 117 R R + E LE A L + L + L F E + +Y +L Sbjct: 63 RGREID--VVRQAEALEEFPA-LHADLEALALAGYVCELAEGFAAEGQAEPGIYGLLLQV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW-VSPKSGGAVCRSV 175 L G E +L GFG +L C G + SP GG +CR Sbjct: 120 LRRLAE-DKSGLPVRFFEARILALTGFGPELGSCAGCGAQPVVPARFSPALGGVLCRGC 177 >gi|260220753|emb|CBA28633.1| DNA repair protein recO [Curvibacter putative symbiont of Hydra magnipapillata] Length = 249 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 21/171 (12%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A +L + E ++ILEV TR YGR + + +PIL + V + Sbjct: 9 EPAFVLHRYDWSESSLILEVFTRHYGRVALVAKGVKKPTSSFRPILLPLQPLHVAFGG-- 66 Query: 63 AQNLGEFRFEVLESHCAKLL------SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 E+ A+ + L G L L +P EL+D+ Sbjct: 67 -------DAEIRTLRSAEWQGGHVMPTGDALLSGYYLNELLITLLARDDPHAELFDIYAQ 119 Query: 117 FLNCH--KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLWV 163 + + V+ EL+LL+ +GF L +T + D+ +V Sbjct: 120 VVRVISSEHGEVLQAALRTFELLLLREVGFLPQLDAQTMTLAPLQADVRYV 170 >gi|254672798|emb|CBA06905.1| DNA repair protein RecO [Neisseria meningitidis alpha275] Length = 248 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L + V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + A+ G + L+ +E A+SL+ A ++T Sbjct: 180 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 219 >gi|297207715|ref|ZP_06924150.1| recombination protein O [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911796|ref|ZP_07129239.1| recombination protein O [Staphylococcus aureus subsp. aureus TCH70] gi|296887732|gb|EFH26630.1| recombination protein O [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886042|gb|EFK81244.1| recombination protein O [Staphylococcus aureus subsp. aureus TCH70] Length = 248 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ ++G + + ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L Sbjct: 60 QWRG-----MGTLNSVDVISQHYKLQMDLFVSSYASLAAETIERSMDEGDIAPYNYQLLQ 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|325130814|gb|EGC53548.1| DNA repair protein RecO [Neisseria meningitidis OX99.30304] Length = 247 Score = 67.5 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L + V +W Sbjct: 8 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + + E LL +G DL G + D + V P Sbjct: 119 KVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + A+ G + L+ +E A+SL+ A ++T Sbjct: 179 EDADALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 218 >gi|256396146|ref|YP_003117710.1| DNA repair protein RecO [Catenulispora acidiphila DSM 44928] gi|256362372|gb|ACU75869.1| DNA repair protein RecO [Catenulispora acidiphila DSM 44928] Length = 243 Score = 67.5 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 9/179 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW--- 58 +D+ ++L R+ GE + I+ +TR GR + + S + L+ V V Sbjct: 5 RDEGVVLRTRNLGEADRIITFLTRDRGRVRAVAKGVRRTSSKFGSRLEPFTFVDVQIFEK 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIF 117 R +L + E L ++ L+S Q+++ L E + P ++ Y +L Sbjct: 65 HGR-DLHLVT-QAETLAAYGGTLVSDYPAYTAGQAMLETAERLSEDDVPAVQQYLLLVGG 122 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L G + L L G+ C G + + +GGAVC Sbjct: 123 LRTLASGEHSAGLVLDAFLLRSLAIAGYAPSFEDCARCGDPGAHRFFNLPAGGAVCSDC 181 >gi|308180765|ref|YP_003924893.1| DNA repair protein RecO [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046256|gb|ADN98799.1| DNA repair protein RecO [Lactobacillus plantarum subsp. plantarum ST-III] Length = 258 Score = 67.5 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 69/184 (37%), Gaps = 12/184 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQA---GNLV-RVNWRS 60 I+L R Y E++++++ +T +YG+ + F+R + +M L G V + Sbjct: 7 GILLFRRDYRERDMLIKFLTAEYGKKMFFIRGARRRGFKMAAELLPFTMGEYVGDLR--- 63 Query: 61 RLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 Q L + ++ +L Y + + P+ +P Y L L Sbjct: 64 --DQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDVAFPDNQPVGRWYQQLTSALQ 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +E+ LL+ G +L C V G + L S GG +C+ Sbjct: 122 LIDQDVAPALVANVVEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLLCQQHWHLD 181 Query: 180 AEKM 183 ++ Sbjct: 182 PHRL 185 >gi|197122960|ref|YP_002134911.1| DNA repair protein RecO [Anaeromyxobacter sp. K] gi|238689872|sp|B4UG90|RECO_ANASK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|196172809|gb|ACG73782.1| DNA repair protein RecO [Anaeromyxobacter sp. K] Length = 254 Score = 67.5 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 65/176 (36%), Gaps = 7/176 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRL-A 63 ++L YGE + ++ ++T + G+ F R ++ R + L+ L+ R R + Sbjct: 8 GVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVRERSGS 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCHK 122 LG V+ L + L R L + +P EL+++L +L+ Sbjct: 68 DLLGLDSVSVVRG-FGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVAYLDALD 126 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVG 176 EL L+ G L C G V + + GGA+C Sbjct: 127 AGPPRPAALRAFELGALRAAGLMPRLDACARCGAPVGEGPVRFDAGEGGALCAGCA 182 >gi|220917752|ref|YP_002493056.1| DNA repair protein RecO [Anaeromyxobacter dehalogenans 2CP-1] gi|254790505|sp|B8JDE1|RECO_ANAD2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219955606|gb|ACL65990.1| DNA repair protein RecO [Anaeromyxobacter dehalogenans 2CP-1] Length = 254 Score = 67.5 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 65/176 (36%), Gaps = 7/176 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRL-A 63 ++L YGE + ++ ++T + G+ F R ++ R + L+ L+ R R + Sbjct: 8 GVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVRERSGS 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCHK 122 LG V+ L + L R L + +P EL+++L +L+ Sbjct: 68 DLLGLDSVSVVRG-FGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVAYLDALD 126 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVG 176 EL L+ G L C G V + + GGA+C Sbjct: 127 AGPPRPAALRAFELGALRAAGLMPRLDACARCGAPVGEGPVRFDAGEGGALCAGCA 182 >gi|255292115|dbj|BAH90592.1| DNA repair protein RecO [uncultured bacterium] gi|255292993|dbj|BAH90090.1| DNA repair protein RecO [uncultured bacterium] Length = 266 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 82/233 (35%), Gaps = 20/233 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D+A++L GE + I+ ++R++G+ R + S + L+ V V + Sbjct: 24 YRDEAVVLRTHKLGEADRIITFLSRRHGKVRAAARGVRRTSSKFGARLEPFTHVDVQFAN 83 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIF 117 R + + + E + + L S + G + R + E +P ++ + +L Sbjct: 84 GRSLEIV--AQVESIRAFGEPLSRDFSRWTAGQAMLETADRLVTEEGQPAVQQFLLLVGA 141 Query: 118 LNCHKIPSVIGK-----IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + G I L L G+ T C G SP +GG VC Sbjct: 142 LRVLNEGTTDGPRETSTILDSYLLRSLAVAGYAPTFTDCAKCGSPGPHRAFSPAAGGVVC 201 Query: 173 RSVG-----LPYAEKMLVLPSFLWK---EEQTIDADSLKSAFQLTDYFLNKYA 217 P + L + L + + ++ LT F + Sbjct: 202 GVCRPPGSVQPRPATLAYLTALLVGDWPATRDATPEVVREGSGLTAAFTTWHL 254 >gi|91789483|ref|YP_550435.1| DNA repair protein RecO [Polaromonas sp. JS666] gi|119361471|sp|Q126K5|RECO_POLSJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91698708|gb|ABE45537.1| DNA repair protein RecO [Polaromonas sp. JS666] Length = 249 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 19/160 (11%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L + E ++ILE+ TRQYGR R + S +PIL + + + Sbjct: 9 EPAYVLHRYDWSESSLILEIFTRQYGRVALVARGAKKPSSSFRPILLPLQPLHIAFGG-- 66 Query: 63 AQNLGEFRFEVLESHCAKLL------SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 E+ A+ + L G L R L +P L+D + Sbjct: 67 -------DAEIRTLKSAEWQGGHVMPTGDALLSGYYLNELLMRLLARDDPHPVLFDAYSA 119 Query: 117 FLNCHKIPSV--IGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + SV + EL LL++IG L T Sbjct: 120 TVQLLASQSVDTLQLALRAFELRLLRDIGLLPLLDAETAT 159 >gi|289670318|ref|ZP_06491393.1| DNA repair protein RecO [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 240 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRVNWRS 60 + +L VR++ E ++++EV+T Q+GR R + H ++ LQ L++ + Sbjct: 5 HERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKHALRAALQPLQLIQFSAVQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L + R + A L L G L R P + ELY Sbjct: 65 RGE--LAQLR-QAEALDTAPRLVGETMLAGFYISELLLRLAPRNDSVPELYACYAQARTH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +L+ +GF DL Sbjct: 122 LASNLPLAWGLRRFERDVLEGLGFAFDL 149 >gi|114320505|ref|YP_742188.1| DNA repair protein RecO [Alkalilimnicola ehrlichii MLHE-1] gi|119361445|sp|Q0A8Y9|RECO_ALHEH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114226899|gb|ABI56698.1| DNA replication and repair protein RecO [Alkalilimnicola ehrlichii MLHE-1] Length = 247 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 8/144 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNWRSRLAQ 64 A +L R + E ++I+E+ +R +GR R G+ S R + +L+ + V +W+ R + Sbjct: 10 PAWVLHRRPWSESSLIVELFSRDFGRIGAVARGGRNSRRWRGLLEPFSPVLASWQGR-GE 68 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 E + A + + G L R L +P EL+ + LN Sbjct: 69 LRSLVAAEPDGARPAL--AGAALASGFYLNELLLRLLRRDDPHPELHPLYGDTLNRLPDE 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDL 148 E LL+ +G+GL L Sbjct: 127 ----AALRGFECRLLEALGYGLLL 146 >gi|304380845|ref|ZP_07363505.1| recombination protein O [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304340572|gb|EFM06506.1| recombination protein O [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 248 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ ++G + + ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L Sbjct: 60 QWRG-----MGTLNSVDVISQHYKLQMDLYVSSYAALAAETIERSMDEGDIAPYNYQLLQ 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|88195374|ref|YP_500178.1| hypothetical protein SAOUHSC_01667 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|284024625|ref|ZP_06379023.1| hypothetical protein Saura13_08540 [Staphylococcus aureus subsp. aureus 132] gi|87202932|gb|ABD30742.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|269941056|emb|CBI49440.1| putative recombination protein O [Staphylococcus aureus subsp. aureus TW20] gi|302751397|gb|ADL65574.1| putative recombinational DNA repair protein (RecF pathway) [Staphylococcus aureus subsp. aureus str. JKD6008] gi|315198739|gb|EFU29067.1| hypothetical protein CGSSa01_09464 [Staphylococcus aureus subsp. aureus CGS01] gi|320140549|gb|EFW32403.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus MRSA131] gi|320144086|gb|EFW35855.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus MRSA177] gi|329314242|gb|AEB88655.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus T0131] Length = 248 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ ++G + + ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L Sbjct: 60 QWRG-----MGTLNSVDVISQHYKLQMDLYVSSYAALAAETIERSMDEGDIAPYNYQLLQ 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|332140213|ref|YP_004425951.1| DNA repair protein RecO [Alteromonas macleodii str. 'Deep ecotype'] gi|254790504|sp|B4RXN1|RECO_ALTMD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|327550235|gb|AEA96953.1| DNA repair protein RecO [Alteromonas macleodii str. 'Deep ecotype'] Length = 234 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 18/157 (11%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR 59 W + A +L R Y E + I++ + + GR + ++ + + +LQ +R+ Sbjct: 4 EWLN-AYVLHRRPYRETSYIVDFFSLEEGRISAVAKGVKNSKSDKKSLLQPFQHLRLQLS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDM 113 + + + ++ S+ L G ++ R +P+ +Y Sbjct: 63 GKSD---------LKNLRHVESVAPSISLTGTALFCAMYVNELTNRIMPQGLASDGVYSA 113 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L + + I Q+E LL +G D T Sbjct: 114 YEAALLALRDEADIEVTLRQLEFALLDEMGLLPDFTS 150 >gi|289662801|ref|ZP_06484382.1| DNA repair protein RecO [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 240 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 57/148 (38%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRVNWRS 60 + +L R++ E ++++EV+T Q+GR R + H ++ LQ L++ + Sbjct: 5 HERGFVLHARAWRETSLLVEVLTEQHGRVGLLARGVHGPRKHALRAALQPLQLIQFSAVQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L + R + A L L G L R P + ELY Sbjct: 65 RGE--LAQLR-QAEALDTAPRLVGETMLAGFYISELLLRLAPRNDSVPELYACYAQARTH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +L+ +GF DL Sbjct: 122 LASNLPLAWGLRRFERDVLEGLGFAFDL 149 >gi|167630515|ref|YP_001681014.1| DNA repair protein reco [Heliobacterium modesticaldum Ice1] gi|238687862|sp|B0TAF3|RECO_HELMI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167593255|gb|ABZ85003.1| DNA repair protein reco [Heliobacterium modesticaldum Ice1] Length = 273 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 84/229 (36%), Gaps = 23/229 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVRVN 57 ++ A++L RSYGE + +L ++TR+ G+ + + R++ Q LV Sbjct: 4 YRAQALVLRSRSYGEADRLLTLLTRERGKLSAIAKGVRKPTSRLRAGTQPLTHSQLVLYE 63 Query: 58 WRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + NL E +ES A F + + R P+ D+ + Sbjct: 64 GK-----NLQTVTQAEPVESFAALHGDVVRFSHASSMAELVDRLSPD---HSGA-DLFPL 114 Query: 117 FLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLL------WVSPKSG 168 L + SV V +L LL +G+ +L+ C+ G ++ SP+ G Sbjct: 115 LLTGWHLLSVFPGDLVACLFQLRLLDRLGYCPELSLCLDCGEPVEIADSGPWPAYSPEMG 174 Query: 169 GAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 G V ++E L+ P L + D L ++ Sbjct: 175 GLVGNCCRHRHSEMGLIAPGALALLRHLLQMDPRDLGRLRVGPKLLRHV 223 >gi|253754669|ref|YP_003027809.1| DNA repair protein RecO [Streptococcus suis BM407] gi|251817133|emb|CAZ54854.1| DNA repair protein RecO [Streptococcus suis BM407] Length = 260 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 11/210 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + ++L R++ E + ++++ T + G+ + FV++ ++ +Q + Sbjct: 1 MERIETRGLVLYNRNFREDDKLVKIFTEKAGKRMFFVKHASKSKLVASIQPLTYADFIVK 60 Query: 60 SRLAQNLGE----FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 L + + ++ + S Y L L ++ L+ L Sbjct: 61 I-NDDGLSYIEDFHQVQPFKNINGDIFKLSYATYILALA---DAALQDKVYDPALFAFLV 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + E+ LL G L+ +C S K G +C Sbjct: 117 KTLDLMESGLDYEVLTNIFEIQLLGRFGISLNFHECAFCHRVGLPFAYSYKYSGVLCPQH 176 Query: 176 GLPYAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q I D L+ Sbjct: 177 YQQDERRAYLDPNVPYLLDQFQAISFDELE 206 >gi|28871357|ref|NP_793976.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato str. DC3000] gi|213971117|ref|ZP_03399236.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato T1] gi|301381866|ref|ZP_07230284.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato Max13] gi|302063244|ref|ZP_07254785.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato K40] gi|302132834|ref|ZP_07258824.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38258467|sp|Q87XG3|RECO_PSESM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28854608|gb|AAO57671.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato str. DC3000] gi|213924106|gb|EEB57682.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato T1] gi|330877433|gb|EGH11582.1| DNA repair protein RecO [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964518|gb|EGH64778.1| DNA repair protein RecO [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015603|gb|EGH95659.1| DNA repair protein RecO [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 227 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|66047176|ref|YP_237017.1| DNA repair protein RecO [Pseudomonas syringae pv. syringae B728a] gi|75500899|sp|Q4ZPE3|RECO_PSEU2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|63257883|gb|AAY38979.1| Recombination protein O, RecO [Pseudomonas syringae pv. syringae B728a] gi|330973034|gb|EGH73100.1| DNA repair protein RecO [Pseudomonas syringae pv. aceris str. M302273PT] Length = 227 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|322436218|ref|YP_004218430.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX9] gi|321163945|gb|ADW69650.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX9] Length = 248 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 71/164 (43%), Gaps = 19/164 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L + E ++++ + TR++G+ G R+ R + L+ V+ W R Sbjct: 12 EAIVLRTWPFHEADLLVSLFTREFGKVKGIARHAMRSRRRFGGALEPMTHVKATWAERPK 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSL-------FLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 Q E++ +++SS + L GL+ + + LP+ ++ + Sbjct: 72 Q-------ELVRLDAFEIMSSPMTAKIDFVRLAGLELVAEVLDELPDGAVEDAVFRLALA 124 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL 160 ++ V + L + + +G+ +L +CVV G +DL Sbjct: 125 VTGAMEVGRVWMPV-TYFCLWMTRLMGWMPELGRCVVCG--EDL 165 >gi|317125251|ref|YP_004099363.1| DNA replication and repair protein RecO [Intrasporangium calvum DSM 43043] gi|315589339|gb|ADU48636.1| DNA replication and repair protein RecO [Intrasporangium calvum DSM 43043] Length = 242 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 86/246 (34%), Gaps = 25/246 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 ++D+AI+L GE + I+ ++TR GR + + + + L+ G +V V + Sbjct: 4 YRDEAIVLRTHKLGEADRIITMLTRTRGRVRAVAKGVRRTKSRFGSRLEPGMVVDVQCYE 63 Query: 60 SRLAQNLGEFR-FEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R NL E L S+ + + + + E EP + Y +L Sbjct: 64 GR---NLDTVTQVETLASYGDVIARDYAAWTAASAMLETSIQLTEEHEPQAQQYLLLAGA 120 Query: 118 L----NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L PS++ F+ L L G+ C G + ++GGAVC Sbjct: 121 LRALSERVHDPSLVLDAFL---LRSLAVAGWAPSFHDCARCGAEGPQRAFNVQAGGAVCP 177 Query: 174 SVG-----LPYAEKMLVLPSFLWKEEQTIDADS---LKSAFQLTDYFLNKYALQHNIIHC 225 P E +L + L + DA + L FL + + Sbjct: 178 LCRPPGSSAPAPETFALLAALLSGDWDVADASDDRQRRQGSGLVAAFLQWHL--ERGVRS 235 Query: 226 HLLREN 231 L E Sbjct: 236 LRLVER 241 >gi|262196745|ref|YP_003267954.1| DNA repair protein RecO [Haliangium ochraceum DSM 14365] gi|262080092|gb|ACY16061.1| DNA repair protein RecO [Haliangium ochraceum DSM 14365] Length = 275 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 14/182 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR-------VNW 58 + +IL YG+ ++I+ + TR +GR R + + + G + Sbjct: 9 EGVILRAVPYGDADLIVTLYTRDFGRLSALGRAARKSKRRF----GGALDMFTLSEVALR 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R+R ++ + S+ A L F + + P P L ++L Sbjct: 65 RARSSELWTLESAQPRRSYSALALDVGTFAHASYGTELVRELSPVEAPDEPLLELLLALY 124 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLW-VSPKSGGAVCRSV 175 + ++ EL LL +G L +C G + W P GG C + Sbjct: 125 EELERDGAHAQVLRAFELALLDALGMAPVLDRCAACGRSDVGARAWLFDPGRGGLCCPTC 184 Query: 176 GL 177 G Sbjct: 185 GA 186 >gi|319787578|ref|YP_004147053.1| DNA repair protein RecO [Pseudoxanthomonas suwonensis 11-1] gi|317466090|gb|ADV27822.1| DNA repair protein RecO [Pseudoxanthomonas suwonensis 11-1] Length = 244 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 9/154 (5%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRV 56 M + + A +L R + E ++++EV++ +GR R S + ++ LQ L + Sbjct: 1 MRIEGETAFVLHARPWRETSLLVEVLSEGHGRLGLVARGVGSPKRQVLRAALQP--LQHI 58 Query: 57 NWRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + + LA L + R E L+S A L + L + R P ++P +L+D Sbjct: 59 RFDAVLAGELAQLRGAEALDS--APRLCGQVQLAAFYLNELVLRLAPRQDPLPDLFDAYA 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + E LL +G G +L Sbjct: 117 RTRAALVEGGSLAWTLRRFERDLLGALGVGFELD 150 >gi|289550663|ref|YP_003471567.1| DNA recombination and repair protein RecO [Staphylococcus lugdunensis HKU09-01] gi|315658158|ref|ZP_07911030.1| recombination protein O [Staphylococcus lugdunensis M23590] gi|289180195|gb|ADC87440.1| DNA recombination and repair protein RecO [Staphylococcus lugdunensis HKU09-01] gi|315496487|gb|EFU84810.1| recombination protein O [Staphylococcus lugdunensis M23590] Length = 251 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 15/194 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG-RHLGFVRNGQSHRM--QPILQA---GNLV 54 M + II+ YGE + ++ ++ ++G + VR + + Q Q G + Sbjct: 1 MLMKQKGIIIKSVDYGESDKVITIL-NEHGAKVPLMVRRAKKAKSGFQAHTQLFVYGLFI 59 Query: 55 RVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 WR +G +V+ H L Y S + + + ++E Y++ Sbjct: 60 YNQWRG-----MGTLNSIDVINQHYELRLDLYTHSYASLSAEIIDKAMDDQEISKYYYEL 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAV 171 L+ L + + + L + GF + CV+TG T +L+ S K GA+ Sbjct: 115 LHFVLTKITAGTSAQLMSIITMLKCMHKYGFSANFNHCVITGSTNPSNLIGYSFKFHGAI 174 Query: 172 CRSVGLPYAEKMLV 185 + +L+ Sbjct: 175 SQEAAYRDPHALLI 188 >gi|90416442|ref|ZP_01224373.1| DNA repair protein recO (Recombination protein O) [marine gamma proteobacterium HTCC2207] gi|90331641|gb|EAS46869.1| DNA repair protein recO (Recombination protein O) [marine gamma proteobacterium HTCC2207] Length = 242 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 19/166 (11%) Query: 1 MYWQ-DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRV 56 M + + +L Y + ++++++ T +GR + + Q I + Sbjct: 1 MRIEAEPGFLLHSTPYRDTSLLVDLYTANHGRVRCVAKGFRKPNKQGINRSIFPYTEHHF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY------GLQSIVPLFRFLPEREPCLEL 110 +W+ R E+ A ++ + +FL GL +R L E++ L Sbjct: 61 SWQGR---------GELKTLTKADVVQAPVFLKQECLFTGLYINELFYRLLQEQDIHQYL 111 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 Y F+ Q+E+ LL+ +G+GL L TG Sbjct: 112 YQQYQQFMAILCGAQPDEVHLRQLEMTLLEELGYGLVLDCEGQTGT 157 >gi|71733200|ref|YP_276082.1| DNA repair protein RecO [Pseudomonas syringae pv. phaseolicola 1448A] gi|289628146|ref|ZP_06461100.1| DNA repair protein RecO [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649888|ref|ZP_06481231.1| DNA repair protein RecO [Pseudomonas syringae pv. aesculi str. 2250] gi|298488679|ref|ZP_07006708.1| DNA recombination and repair protein RecO [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|92087030|sp|Q48EV5|RECO_PSE14 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71553753|gb|AAZ32964.1| DNA repair protein RecO [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156752|gb|EFH97843.1| DNA recombination and repair protein RecO [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325570|gb|EFW81632.1| DNA repair protein RecO [Pseudomonas syringae pv. glycinea str. B076] gi|320327144|gb|EFW83158.1| DNA repair protein RecO [Pseudomonas syringae pv. glycinea str. race 4] gi|330871239|gb|EGH05948.1| DNA repair protein RecO [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330879242|gb|EGH13391.1| DNA repair protein RecO [Pseudomonas syringae pv. glycinea str. race 4] gi|330989030|gb|EGH87133.1| DNA repair protein RecO [Pseudomonas syringae pv. lachrymans str. M301315] Length = 227 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|327540470|gb|EGF27055.1| DNA repair protein recO [Rhodopirellula baltica WH47] Length = 276 Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 13/179 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS-----R 61 AI+L + E ++I+ ++T+ GR + R++ + G+L ++ + + Sbjct: 8 AIVLRTVDFSETSLIVTLLTKDLGRISALAKGA--RRLKGPFE-GSLDLLSVCAITLIDK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNC 120 L L S L+ I + R L + +P EL+DM + Sbjct: 65 PGDTLDLLTESKLRRRFRGAQRSLERLHAGYYIAEMLRLLVDDDDPHRELFDMTLSAMGM 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD----LLWVSPKSGGAVCRSV 175 + K + + L+ +G +C V G + S GG VC + Sbjct: 125 IDGEGHVAKTLLAFDAQCLRLLGHSPATQRCTVCGRDAERSRRRASFSLVGGGVVCENC 183 >gi|322374257|ref|ZP_08048789.1| DNA repair protein RecO [Streptococcus sp. C150] gi|321276861|gb|EFX53934.1| DNA repair protein RecO [Streptococcus sp. C150] Length = 257 Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 77/207 (37%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 + ++L R+Y E + ++++ T Q G+ + FVR G + ++ ++Q L + + Sbjct: 5 ESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGAGKLSAVIQP--LTIAEFMMTVN 62 Query: 63 AQNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L + E + + + S Y L ++ + + +L+ L L Sbjct: 63 DEGLSFIEDYSQAESFKEITSDIFKLSYATY-LAALT--DAAIADGMVDEQLFAFLEKTL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + E+ +L G L+ +CV S K G +C + Sbjct: 120 ELMEEGLDYEILTNIFEVQVLDRFGVKLNFHECVFCHRVGLPFDFSYKYSGLLCPNHYAE 179 Query: 179 YAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L Q + L+ Sbjct: 180 DERRSHLDPNVPYLLDRFQGLSFKELR 206 >gi|289642684|ref|ZP_06474824.1| DNA repair protein RecO [Frankia symbiont of Datisca glomerata] gi|289507514|gb|EFD28473.1| DNA repair protein RecO [Frankia symbiont of Datisca glomerata] Length = 243 Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 8/179 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D+ ++L E + I+ V+TR+ GR + + S R L+ G V + + Sbjct: 4 YRDEGVVLRTTPLAEADRIITVLTRRTGRIRAVAKGVRRTSSRFGARLEPGTYVDLQLYE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS--SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + + ++L + A + S + ER+P + L+ +L Sbjct: 64 GRSLDTV--TQADILSPYGAVIASDYPRHTAAAVMLETAERLTSEERQPAMRLFLLLVGG 121 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + + L L G+G+ L C G S +GG VC Sbjct: 122 LRTLAQGERAPSLVLDAFLLRALTIAGYGMALADCAHCGDPGPHHAFSVPAGGVVCPEC 180 >gi|257486566|ref|ZP_05640607.1| DNA repair protein RecO [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010048|gb|EGH90104.1| DNA repair protein RecO [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 227 Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R LP +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDG 147 >gi|32473195|ref|NP_866189.1| DNA repair protein recO [Rhodopirellula baltica SH 1] gi|32397874|emb|CAD73875.1| probable DNA repair protein recO [Rhodopirellula baltica SH 1] Length = 276 Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 13/179 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS-----R 61 AI+L + E ++I+ ++T+ GR + R++ + G+L ++ + + Sbjct: 8 AIVLRTVDFSETSLIVTLLTKDLGRISALAKGA--RRLKGPFE-GSLDLLSVCAITLIDK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNC 120 L L S L+ I + R L + +P EL+DM + Sbjct: 65 PGDTLDLLTESKLRRRFRGAQRSLERLHAGYYIAEMLRLLVDDDDPHRELFDMTLSAMGM 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD----LLWVSPKSGGAVCRSV 175 + K + + L+ +G +C V G + S GG VC + Sbjct: 125 IDGEGHVAKTLLAFDAQCLRLLGHSPATQRCTVCGRDAERSRRRASFSLVGGGVVCENC 183 >gi|222152223|ref|YP_002561398.1| DNA repair protein RecO [Streptococcus uberis 0140J] gi|222113034|emb|CAR40355.1| DNA repair protein RecO [Streptococcus uberis 0140J] Length = 257 Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 8/201 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R+Y E + ++++ T G+ + FV+N ++ ++Q L ++ +L + Sbjct: 8 GLVLYNRNYREDDKLVKIFTETSGKRMFFVKNVGKSKLASVIQP--LTIADFMMKLNE-K 64 Query: 67 GEFRFE---VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 G E ++++ Y + + + E L+ L L+ + Sbjct: 65 GLSYIEDYNSVQNYPKINQDLFKLSYASYLLALADAAISDNESDPHLFVFLKKTLDLMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ +CV T S K G +C + Sbjct: 125 GLDYEVLTNIFEIQVLDRFGLHLNFNECVFCHRTGLPFDFSHKYSGLLCPQHFHEDLHRS 184 Query: 184 LVLPS--FLWKEEQTIDADSL 202 + P+ +L + Q+I L Sbjct: 185 HLDPNVIYLLNQFQSIHFSDL 205 >gi|227551967|ref|ZP_03982016.1| recombination protein RecO [Enterococcus faecium TX1330] gi|257895441|ref|ZP_05675094.1| recombination protein O [Enterococcus faecium Com12] gi|293378308|ref|ZP_06624477.1| DNA repair protein RecO [Enterococcus faecium PC4.1] gi|227178872|gb|EEI59844.1| recombination protein RecO [Enterococcus faecium TX1330] gi|257832006|gb|EEV58427.1| recombination protein O [Enterococcus faecium Com12] gi|292643172|gb|EFF61313.1| DNA repair protein RecO [Enterococcus faecium PC4.1] Length = 272 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ Q+ + P L Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVY----- 60 Query: 62 LAQNLGEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYD 112 +G FR E L + H + + +FL YG + + + + + L+ Sbjct: 61 ----IGNFRSEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQ 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 117 FTQQALQRMDQGDDAEIITNIFEVQILQRFGITPIWTHCVVCGETKGKFDYSSKYGGVIC 176 Query: 173 R 173 Sbjct: 177 E 177 >gi|255659364|ref|ZP_05404773.1| DNA repair protein RecO [Mitsuokella multacida DSM 20544] gi|260848448|gb|EEX68455.1| DNA repair protein RecO [Mitsuokella multacida DSM 20544] Length = 246 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 82/220 (37%), Gaps = 27/220 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 +Q +A++LG +++G+ + ++ T++ G R + L AG + ++ L Sbjct: 4 YQTEAVVLGSKNWGDADKMMTFFTKERGLVRAAAFG--CRRPRSPL-AGGMQMFSY---L 57 Query: 63 AQNLGEFR-FEVLES----HCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLN 115 L E R + + + LS L S V L FLPE +P ++ L Sbjct: 58 DLQLSEGRRVDTVRQCLLRRHYRKLSEDLTAMAYGSFVAEFLREFLPEGQPEPRMFAALL 117 Query: 116 IFLNCHKIPS----VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGA 170 L+ + + + ++ L++ G L CV G + S GG Sbjct: 118 DILDAFERRNPRVTAVAAVY-----QLMEFTGLQLRYENCVHCGRKIEGDAAFSMHEGGV 172 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSA-FQLT 209 +CR P A+ P L + + +L+ Sbjct: 173 LCRDCATPDAK---AFPEELRHFIVGLRDFDWQRGELRLS 209 >gi|283470844|emb|CAQ50055.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus ST398] Length = 248 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLVRV 56 + II+ YGE + I+ ++ ++G + + ++ +++ LQA G + Sbjct: 2 RQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMAR-RAKKVKTGLQAQTQLFVYGLFIYN 59 Query: 57 NWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 WR +G +V+ H + + Y + + R + E + Y +L Sbjct: 60 QWRG-----MGTLNSVDVISQHYKLQMDLYVSSYSSLAAETIERSMDEGDIAPYNYQLLQ 114 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 115 FVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISR 174 Query: 174 SVG 176 Sbjct: 175 QEA 177 >gi|188587696|ref|YP_001920269.1| DNA repair protein RecO [Clostridium botulinum E3 str. Alaska E43] gi|188497977|gb|ACD51113.1| DNA repair protein RecO [Clostridium botulinum E3 str. Alaska E43] Length = 249 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 74/189 (39%), Gaps = 21/189 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVN 57 ++ A+I+ + + E + ++ + T + G+ + + + + L G + Sbjct: 7 FESKAVIIKSQDFKENDKLVWLYTEELGKIAAIAKGAKKSKNKTFSITLPLCYGEYM--- 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAK--LLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDML 114 L + + + +S + LL + L + L P+ E +++ L Sbjct: 64 ----LYKGKNLYTIQEGKSINSFQGLLENLDKLTYSSYLCELIDICTPDDEKNKQIFIDL 119 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL---WVSPKSGGA 170 ++ ++ V+ EL LLKN G+ L+L C + + ++ ++S + G Sbjct: 120 VTTFYLLDTNALEYELLVRAFELKLLKNTGYSLELDNCCMC--KKKIISSNYISLSNYGG 177 Query: 171 VCRSVGLPY 179 VC Y Sbjct: 178 VCDECPKEY 186 >gi|227495129|ref|ZP_03925445.1| DNA repair protein RecO [Actinomyces coleocanis DSM 15436] gi|226831581|gb|EEH63964.1| DNA repair protein RecO [Actinomyces coleocanis DSM 15436] Length = 244 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 12/212 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR- 59 ++D+ I+L GE + I+ ++T +G + + + + L+ +V Sbjct: 5 YRDEGIVLRTHKLGEADRIITLLTHHHGVKRVVAKGVRRTTSKFGSRLEPFTVVDAQIHI 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R L + E + + ++ +V L E + ++Y +L L+ Sbjct: 65 GRSLDVLN--QVESIRQYGLQIAQDYDKYMRASVLVETAERLSEDDASPQMYLLLLGALH 122 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV--- 175 + + L + G+ C + G + +SGGAVC Sbjct: 123 ALATGRYPADLVMNSFLLRAMALSGWAPSFWDCALCGANGPSQYFHLQSGGAVCLECRPP 182 Query: 176 --GLPYAEKMLVLPSFLWKE-EQTIDADSLKS 204 P AE M +L L + E + ++ Sbjct: 183 GSAAPSAEAMRLLGELLSGDWEAALTSEDFAR 214 >gi|331004917|ref|ZP_08328331.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC1989] gi|330421267|gb|EGG95519.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC1989] Length = 229 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 59/152 (38%), Gaps = 9/152 (5%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-----SHRMQPILQAGNLVRVNWRSRLA 63 +L R Y + +++++++++ +G+ R + S + +LQ + ++W + Sbjct: 1 MLHTRPYRDTSLLVDILSQSHGKLTLIARGARKTSKSSQNPRHLLQPFMPLSLSWTGK-- 58 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L + L+ L+ + + L L E +P ++Y L+ Sbjct: 59 GTLKTLTTMEAAAPAIPLIGHHLY-SAMYANELLVYLLQEGDPNEDIYVHYEKLLSMLSN 117 Query: 124 PSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVT 154 + ++ E LL +G+ + + T Sbjct: 118 TQYSIEAALRQFEFALLAVLGYEIGFSHDAET 149 >gi|325569849|ref|ZP_08145843.1| recombination protein O [Enterococcus casseliflavus ATCC 12755] gi|325156972|gb|EGC69140.1| recombination protein O [Enterococcus casseliflavus ATCC 12755] Length = 257 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 68/177 (38%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 I+L + + EK+ ++++ T G+ + +V+ + P+ +++ A + Sbjct: 8 GILLFSKDHKEKDKLVKIFTESAGKQMFYVKGAH-RKNNPL----APALLSYTE--ATYM 60 Query: 67 GEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNIF 117 G + E L + H + + S +F+ Y + + +R LY L+ Sbjct: 61 GTIKTEGLSFLNNAKDIHPFRTIQSDIFIAGYATYLLNLADSAIDDRVYDPHLYQFLHEA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ + I E+ +L G + T C + G T S K G +C Sbjct: 121 LHLMDQGNDAEIITNIFEIQILHRFGITPNWTHCAICGKTDGRFDYSSKYSGILCEQ 177 >gi|288904245|ref|YP_003429466.1| DNA repair and homologous recombination RecO [Streptococcus gallolyticus UCN34] gi|306830272|ref|ZP_07463443.1| recombination protein O [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977221|ref|YP_004286937.1| DNA repair protein recO [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288730970|emb|CBI12514.1| putative DNA repair and homologous recombination RecO [Streptococcus gallolyticus UCN34] gi|304427519|gb|EFM30620.1| recombination protein O [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177149|emb|CBZ47193.1| DNA repair protein recO [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 251 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 13/211 (6%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R+Y E + ++++ T G+H+ FV++ R ++Q + + + Sbjct: 1 MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTVAKFILK 60 Query: 60 SRLAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDML 114 L + + A L S Y + L +P+ +L+ + Sbjct: 61 I-NDTGLSFIEDYKEVDSFKEINADLFKLSYASY----VTALADAAVPDGVADPQLFAFV 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 N L+ + + E+ LL+ G L+ +C S K G +C Sbjct: 116 NKTLSLMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRVGLPFDFSHKYSGLLCPE 175 Query: 175 --VGLPYAEKMLVLPSFLWKEEQTIDADSLK 203 Y + +L Q I D LK Sbjct: 176 HYGKDDYRSHLDPNVLYLVDRFQAIHFDELK 206 >gi|160933321|ref|ZP_02080709.1| hypothetical protein CLOLEP_02166 [Clostridium leptum DSM 753] gi|156867198|gb|EDO60570.1| hypothetical protein CLOLEP_02166 [Clostridium leptum DSM 753] Length = 254 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M D +I+ +S GE + ++ V+TR+ G FVR ++ + + A + + + S Sbjct: 1 MQINTDGLIIREQSIGESDRLVTVLTREQGILRAFVRGAKAMKSRS---ASSTQLLCY-S 56 Query: 61 RLAQNLGEFRF-----EVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PER-EPCLELYDM 113 RL+ G ++ E +E + L + L Q L L PE+ E L + Sbjct: 57 RLSIYEGREKYIIDEAEPIEVFFS-LRTDFEKLSLAQYFCELALALAPEKMEAGDFLRLV 115 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVC 172 LN K +I +E+ +L GF DL C G + D ++ K G C Sbjct: 116 LNALYFLGKGKLPAAQIKAIVEMRMLSLAGFMPDLVCCAQCGAYEADQMYFMVKQGSLYC 175 Query: 173 RSV 175 S Sbjct: 176 GSC 178 >gi|251780100|ref|ZP_04823020.1| DNA repair protein RecO [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084415|gb|EES50305.1| DNA repair protein RecO [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 249 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 74/189 (39%), Gaps = 21/189 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVN 57 ++ A+I+ + + E + ++ + T + G+ + + + + L G + Sbjct: 7 FESKAVIIKSQDFKENDKLVWLYTEELGKIAAIAKGAKKSKNKTFSITLPLCYGEYM--- 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAK--LLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDML 114 L + + + +S + LL + L + L P+ E +++ L Sbjct: 64 ----LYKGKNLYTIQEGKSINSFQGLLENLDKLTYSSYLCELIDICTPDDEKNKQIFIDL 119 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL---WVSPKSGGA 170 ++ ++ V+ EL LLKN G+ L+L C + + ++ ++S + G Sbjct: 120 VTTFYLLDTNALEYELLVRAFELKLLKNTGYSLELDNCCMC--KKKIISSNYISLSNYGG 177 Query: 171 VCRSVGLPY 179 VC Y Sbjct: 178 VCGECPKEY 186 >gi|330999957|ref|ZP_08323655.1| DNA repair protein RecO [Parasutterella excrementihominis YIT 11859] gi|329573364|gb|EGG54976.1| DNA repair protein RecO [Parasutterella excrementihominis YIT 11859] Length = 234 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 53/146 (36%), Gaps = 8/146 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVNWRS 60 Q A +L + E ++I+E TR YGR V G M + +L + V++ Sbjct: 13 QQPAFVLHTYPWRETSLIVEFFTRDYGRIP-LVARGAKRPMSQYRGLLNPFCPLAVSYSG 71 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + R E + ++ + + L R LP EP L+ + L Sbjct: 72 K-GEVKNLTRCEWYGTIP---MNEKVLMSAFYINELLVRLLPRGEPEPSLFTIYYDTLKK 127 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGL 146 + E LK +G+ L Sbjct: 128 LALEKDYLVPLRYFERDFLKVLGYAL 153 >gi|119026173|ref|YP_910018.1| DNA repair protein RecO [Bifidobacterium adolescentis ATCC 15703] gi|166221885|sp|A1A2K3|RECO_BIFAA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118765757|dbj|BAF39936.1| DNA repair protein recO [Bifidobacterium adolescentis ATCC 15703] Length = 246 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 21/186 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAG---NLVRVN 57 +QD+ ++L GE + IL ++TR +G+ + + + + L+ L+ Sbjct: 4 YQDEGVVLRTAKLGEADRILTLLTRDHGKVRAVAKGVRRTKSRFGGRLEPFMRVALLIAE 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYD--- 112 RS L + E + ++ + + I L E+EP + Y Sbjct: 64 GRS-LD---VVSQAESIAAYAGPICADFQAYTAANVICETADKLVATEKEPAVAQYRLVL 119 Query: 113 -MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLL-WVSPKSG 168 LN PS IG +V L L G+ L CVV G ++ L + S +G Sbjct: 120 GALNALAKHAHEPSTIGDSYV---LRALAIAGWTPRLRVCVVCGEPISSALSWYFSIPAG 176 Query: 169 GAVCRS 174 G +C + Sbjct: 177 GLMCAA 182 >gi|300788452|ref|YP_003768743.1| DNA repair protein RecO [Amycolatopsis mediterranei U32] gi|299797966|gb|ADJ48341.1| DNA repair protein RecO [Amycolatopsis mediterranei U32] Length = 292 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 80/205 (39%), Gaps = 19/205 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D ++L GE + I+ ++TR++G+ + + S R L+ V V + Sbjct: 5 YRDTGVVLRTHKLGEADRIVTLLTRRHGKVRAVAKGVRRTSSRFGARLEPFGHVDVQFYT 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYD----M 113 R + E +++ L++ +I L E EP L+LY Sbjct: 65 GRTLD--VITQVETVDAFQLPLVADYQSYTAASAIAETADRLSAEEGEPVLKLYLLVVGA 122 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + + S++ F L + G+ LT+C G+ S +GG++C+ Sbjct: 123 LRALADGTRDSSLVLDAFF---LRAMSYAGWAPALTECARCGLPGPHTAFSVAAGGSMCQ 179 Query: 174 SVG-----LPYAEKMLVLPSFLWKE 193 P E + +L + L E Sbjct: 180 DCRIAGCVHPAPEVLALLTALLHGE 204 >gi|224282594|ref|ZP_03645916.1| DNA repair protein RecO [Bifidobacterium bifidum NCIMB 41171] gi|313139752|ref|ZP_07801945.1| DNA repair protein RecO [Bifidobacterium bifidum NCIMB 41171] gi|313132262|gb|EFR49879.1| DNA repair protein RecO [Bifidobacterium bifidum NCIMB 41171] Length = 260 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 35/213 (16%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTAKLGEADRIVTLLTRSHGKVRAVAKGVRRVKSRFGGRLEPFMRVDVLIAT 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIF 117 R + E + ++ A + + +V L E E + Y +L Sbjct: 64 GRTLD--VVSQVESISAYAAPICADYGAYGIANVMVETADKLVSAEGERAVAQYRLLVGG 121 Query: 118 LNCH----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG------------------ 155 LN + IG+ +V L L G+ L CVV G Sbjct: 122 LNALARHAHPATAIGESYV---LRALALAGWTPRLHSCVVCGRHVAVSPVAGESGDDGGA 178 Query: 156 ---VTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++ SP +GG +C + P A+++ Sbjct: 179 GESRMSGPMFFSPSAGGLMCSTDRTPDAKRIDP 211 >gi|332994406|gb|AEF04461.1| DNA repair protein RecO [Alteromonas sp. SN2] Length = 236 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 17/152 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 A +L R+Y E + I++ T + G+ + ++ + + +LQ +++ + Sbjct: 8 AFVLHRRAYRETSYIVDFFTLEQGKVSAVAKGVRNSKSDKKSLLQPFQALKLQLAGKSD- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFL 118 + + + S+ L G ++ R +P +++ L Sbjct: 67 --------LKNLRHVESTAPSINLVGTPLFCAMYLNELTNRIMPAGLASDAVFEAYGQAL 118 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 I + EL LL +G D T+ Sbjct: 119 TALFSDDDIEITLRKFELSLLDEMGLLPDFTE 150 >gi|28199178|ref|NP_779492.1| DNA repair protein RecO [Xylella fastidiosa Temecula1] gi|182681909|ref|YP_001830069.1| DNA repair protein RecO [Xylella fastidiosa M23] gi|32129944|sp|Q87C04|RECO_XYLFT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691045|sp|B2I606|RECO_XYLF2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28057284|gb|AAO29141.1| DNA repair protein RecO [Xylella fastidiosa Temecula1] gi|182632019|gb|ACB92795.1| DNA repair protein RecO [Xylella fastidiosa M23] gi|307578164|gb|ADN62133.1| DNA repair protein RecO [Xylella fastidiosa subsp. fastidiosa GB514] Length = 243 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 7/161 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVNWRS 60 + A +L VR + E ++++EV+T+ YGR R Q + ++ LQ +R + Sbjct: 5 HEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRFSAIQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R LG+ R + A L L L R +P P ELY + Sbjct: 65 RGE--LGQLR-QAEALDTAPRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRER 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + + EL +L+ +G G +L C G D Sbjct: 122 LRTNDSLAWSLRLFELDILETLGVGFNLE-CDANGTPLDPA 161 >gi|119713401|gb|ABL97463.1| DNA repair protein RecO [uncultured marine bacterium HF130_81H07] Length = 238 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 66/168 (39%), Gaps = 12/168 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + AI+L ++ E ++I T +YG R +S + + I G + + + Sbjct: 5 RFSSKAILLHSANFRESSLIGTFFTDEYGLIKLVARGARSKKNKLSNIKVPGAIFEIEFG 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF-- 117 + + E+++S K S+L +Y L + R + P ++ L Sbjct: 65 GK-GDLKNLYTCEIIDSIIIK--ESNLKIY-LYLNEIIIRTIEPEAPVKSIFKSLISLYK 120 Query: 118 -LNCHKIPSVIGKIFVQIELMLLKNIG--FGLDLTKCVVTGVTQDLLW 162 + + P+ + EL L+ +G F L L + +DL++ Sbjct: 121 DIQLSESPTERELKLRKFELDLISELGYEFSLTLDSKGKK-IKEDLIY 167 >gi|311063922|ref|YP_003970647.1| DNA repair protein RecO [Bifidobacterium bifidum PRL2010] gi|310866241|gb|ADP35610.1| RecO DNA repair protein [Bifidobacterium bifidum PRL2010] Length = 260 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 35/213 (16%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTAKLGEADRIVTLLTRSHGKVRAVAKGVRRVKSRFGGRLEPFMRVDVLIAT 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIF 117 R + E + ++ A + + +V L E E + Y +L Sbjct: 64 GRTLD--VVSQVESISAYAAPICADYGAYGIANVMVETADKLVSAEGERAVAQYRLLVGG 121 Query: 118 LNCH----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT------------------- 154 LN + IG+ +V L L G+ L CVV Sbjct: 122 LNALARHAHPATAIGESYV---LRALALAGWTPRLHSCVVCGRHVAVSPVAGESGDDGGA 178 Query: 155 --GVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 G ++ SP +GG +C + P A+++ Sbjct: 179 GEGRMSGPMFFSPSAGGLMCSTDRTPDAKRIDP 211 >gi|42559449|sp|Q7USC2|RECO_RHOBA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 270 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 13/179 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS-----R 61 AI+L + E ++I+ ++T+ GR + R++ + G+L ++ + + Sbjct: 2 AIVLRTVDFSETSLIVTLLTKDLGRISALAKGA--RRLKGPFE-GSLDLLSVCAITLIDK 58 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNC 120 L L S L+ I + R L + +P EL+DM + Sbjct: 59 PGDTLDLLTESKLRRRFRGAQRSLERLHAGYYIAEMLRLLVDDDDPHRELFDMTLSAMGM 118 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD----LLWVSPKSGGAVCRSV 175 + K + + L+ +G +C V G + S GG VC + Sbjct: 119 IDGEGHVAKTLLAFDAQCLRLLGHSPATQRCTVCGRDAERSRRRASFSLVGGGVVCENC 177 >gi|86157729|ref|YP_464514.1| DNA replication and repair protein RecO [Anaeromyxobacter dehalogenans 2CP-C] gi|119361446|sp|Q2IQJ8|RECO_ANADE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|85774240|gb|ABC81077.1| DNA replication and repair protein RecO [Anaeromyxobacter dehalogenans 2CP-C] Length = 254 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 64/176 (36%), Gaps = 7/176 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRL-A 63 ++L YGE + ++ ++T + G+ F R ++ R + L+ L+ R R + Sbjct: 8 GVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVRERSGS 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCHK 122 LG V+ L + L R L + +P EL+D+L +L Sbjct: 68 DLLGLDSVSVVRG-FGALRGDLGRIACAGYAAELARELVRDHQPHDELFDLLVAYLGALD 126 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVG 176 EL L+ G L C G V + + GGA+C Sbjct: 127 AAPPRPAALRAFELGALRAAGLMPRLDACARCGAPVGEGPVRFDAGEGGALCGGCA 182 >gi|325285977|ref|YP_004261767.1| DNA repair protein RecO [Cellulophaga lytica DSM 7489] gi|324321431|gb|ADY28896.1| DNA repair protein RecO [Cellulophaga lytica DSM 7489] Length = 239 Score = 65.9 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 11/155 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRV 56 M AI+L YG+ ++I++ T G ++ S + Q + + Sbjct: 1 MQVTTKAIVLSALKYGDNSLIVKAYTLSDGLKSYLLKGVLSSKKGKVKAAYFQPLTQLEL 60 Query: 57 NWRSRLAQNLGEFRF--EVLESHCAKLLSSSLFLYGLQ--SIVPLFRFLPEREPCLELYD 112 + +N G E S+ + L S++ + L L E EP L++ Sbjct: 61 I---AVHKNKGTLESVREAKTSYHYQTLHSNIAKNAMTQFLAEMLSNSLLEEEPNENLFN 117 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 + L S I + L + K +GF D Sbjct: 118 YIEAALQWLDTESQIANFHLHFLLSITKYLGFYPD 152 >gi|303257005|ref|ZP_07343019.1| DNA repair protein RecO [Burkholderiales bacterium 1_1_47] gi|302860496|gb|EFL83573.1| DNA repair protein RecO [Burkholderiales bacterium 1_1_47] Length = 235 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 53/146 (36%), Gaps = 8/146 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVNWRS 60 Q A +L + E ++I+E TR YGR V G M + +L + V++ Sbjct: 14 QQPAFVLHTYPWRETSLIVEFFTRDYGRIP-LVARGAKRPMSQYRGLLNPFCPLAVSYSG 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + R E + ++ + + L R LP EP L+ + L Sbjct: 73 K-GEVKNLTRCEWYGTIP---MNEKVLMSAFYINELLVRLLPRGEPEPSLFTIYYDTLKK 128 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGL 146 + E LK +G+ L Sbjct: 129 LALEKDYLVPLRYFERDFLKVLGYAL 154 >gi|254429213|ref|ZP_05042920.1| DNA repair protein RecO [Alcanivorax sp. DG881] gi|196195382|gb|EDX90341.1| DNA repair protein RecO [Alcanivorax sp. DG881] Length = 225 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 84/233 (36%), Gaps = 22/233 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ R + ++ +++ GR VR G R P+L + V + Sbjct: 11 AWLIHRRPFRNTSLTVDLFLPALGRIGAVVRGG---RKDPLLAPFTPLWVALKPSGE--- 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + E +L+ + LY G L R L +P ++ + L+ + + Sbjct: 65 -MYSLRACEPRGNRLMLTGKALYCGFYLNELLTRLLHRDDPNPSVWPLYEQALSDLQTQT 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRSVGLPYAEK 182 Q EL +L+ IG+G+ L + V G + L ++P+ G A + G Sbjct: 124 PFDITLRQFELAVLEQIGYGIALDQ-DVHGHGLDPEALYQLNPEQGLAKTETGGGYAGAD 182 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +L + + S ++A L + L + RE F K Sbjct: 183 LLAI------AQGDWHPASRRAALSLCRHLLAPHL----GNRPLKSRELFREK 225 >gi|294791413|ref|ZP_06756570.1| DNA repair protein RecO [Scardovia inopinata F0304] gi|294457884|gb|EFG26238.1| DNA repair protein RecO [Scardovia inopinata F0304] Length = 244 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 74/196 (37%), Gaps = 24/196 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR-VNWRSR 61 ++D ++L GE + I+ ++T +G+ + + + G+ + W Sbjct: 4 YRDQGVVLRTIKLGEADRIITILTAHHGKIRAVAHGVRRAKSRF----GSRLEPFMWDDL 59 Query: 62 LAQNLGEFRFEVLE-----SHCAKLLSSSLFLYGLQSIVP--LFRFLPE--------REP 106 L G + + S A L+ + Y S++ + + + + R+ Sbjct: 60 LIAQ-GRHDLDTISQAVVISPYASLIVGTYEAYLSASVIVETVDKMITDLRQTGISQRQQ 118 Query: 107 CLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + L P +I +V L L G+ L CVV G + + S + Sbjct: 119 YTLVIGALAALAEGKHSPQMIENSYV---LRALSLAGWTPRLDSCVVCGRRDQVEYFSTE 175 Query: 167 SGGAVCRSVGLPYAEK 182 +GGA+C + LP + K Sbjct: 176 AGGAMCLTHRLPRSHK 191 >gi|154488980|ref|ZP_02029829.1| hypothetical protein BIFADO_02289 [Bifidobacterium adolescentis L2-32] gi|154083117|gb|EDN82162.1| hypothetical protein BIFADO_02289 [Bifidobacterium adolescentis L2-32] Length = 246 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 21/186 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAG---NLVRVN 57 +QD+ ++L GE + IL ++TR +G+ + + + + L+ L+ Sbjct: 4 YQDEGVVLRTAKLGEADRILTLLTRDHGKVRAVAKGVRRTKSRFGGRLEPFMRVALLIAE 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYD--- 112 RS L + E + ++ + + I L E+EP Y Sbjct: 64 GRS-LD---VVSQAESIAAYAGPICADFQAYTAANVICETADKLVATEKEPAAAQYRLVL 119 Query: 113 -MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLL-WVSPKSG 168 LN S IG +V L L G+ L CVV G ++ L + S +G Sbjct: 120 GALNALAKHAHDSSAIGDSYV---LRALAIAGWTPRLRVCVVCGEPISSTLSWYFSIPAG 176 Query: 169 GAVCRS 174 G +C + Sbjct: 177 GLMCAA 182 >gi|296130029|ref|YP_003637279.1| DNA repair protein RecO [Cellulomonas flavigena DSM 20109] gi|296021844|gb|ADG75080.1| DNA repair protein RecO [Cellulomonas flavigena DSM 20109] Length = 243 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 10/180 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR++G+ + + + L+ V V Sbjct: 4 YRDEAIVLRTHKLGEADRIVTLLTREHGKVRAVGKGVRRTTSRFGSRLEPFMHVDVQLS- 62 Query: 61 RLAQNL-GEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFL--PEREPCLELYDMLNI 116 +NL + E L + + +S LY + +++ L EREP ++ Y +L Sbjct: 63 -TGRNLDVVTQVETLGPY-GRHISEDYALYTVGTAMLETAERLVEAEREPAVQQYRLLVG 120 Query: 117 FLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + + L L G+ T C G +P GGAVC + Sbjct: 121 AVRALATRAHAPGLVLDSYLLRALAVAGWAPSFTDCARCGEPGPHHAFAPAVGGAVCLTC 180 >gi|119716162|ref|YP_923127.1| DNA repair protein RecO [Nocardioides sp. JS614] gi|171704605|sp|A1SI05|RECO_NOCSJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119536823|gb|ABL81440.1| DNA replication and repair protein RecO [Nocardioides sp. JS614] Length = 244 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 70/189 (37%), Gaps = 15/189 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNW 58 M ++D+AI+L GE + I+ ++TRQ GR + + + L+ V + Sbjct: 1 MLYRDEAIVLRTHKLGEADRIVTLLTRQRGRVRAVAKGVRRTTSRFGSRLEPFTHVDLQ- 59 Query: 59 RSRLAQ--NLGEFR-FEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLP-EREPCLELYDM 113 LA+ NL E L L L + G + R + EREP ++ + + Sbjct: 60 ---LAEGRNLDTITQAETLTPFSKGLGLDYDRYTAGTVMLETADRLVAEEREPSVQQFLL 116 Query: 114 LNIFLNCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGG 169 L L ++ L L G+ C G W +P GG Sbjct: 117 LVGGLRAMVAGEHAPGQVLDSYLLRSLAVAGYAPSFEHCARCGTLSAEGAHRWFNPSMGG 176 Query: 170 AVCRSVGLP 178 +C + +P Sbjct: 177 MLCSTCRVP 185 >gi|261378403|ref|ZP_05982976.1| DNA repair protein RecO [Neisseria cinerea ATCC 14685] gi|296315083|ref|ZP_06865024.1| DNA repair protein RecO [Neisseria polysaccharea ATCC 43768] gi|269145175|gb|EEZ71593.1| DNA repair protein RecO [Neisseria cinerea ATCC 14685] gi|296837987|gb|EFH21925.1| DNA repair protein RecO [Neisseria polysaccharea ATCC 43768] Length = 246 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 17/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V V+W Sbjct: 8 HEPVFMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSW--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 65 ------YGSQELKTLHRAEWVGGWRQPQGRALFGGLYVNELVLKLTAREDPMPELYDALA 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + + E LL +G DL Sbjct: 119 EVMKAVCCEADHVADLRRFEWKLLTALGVAPDL 151 >gi|331269997|ref|YP_004396489.1| DNA repair protein RecO [Clostridium botulinum BKT015925] gi|329126547|gb|AEB76492.1| DNA repair protein RecO [Clostridium botulinum BKT015925] Length = 238 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 11/175 (6%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQA---GNLVRVNWRSRLA 63 +L + Y E + ++ + T + G+ + + ++ + + QA G V R + Sbjct: 1 MLKTQDYKENDKLVWLFTEKIGKICAIAKGAKKNKSKFMSSTQAFCFGEYVLF--RGKSL 58 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 N+ E ++++S L YG + L + E EL+ K Sbjct: 59 YNINE--IDIIDSFQDLLKDMDTITYGSYFCELILIALEQEESNRELFKDFIKSFYFIKN 116 Query: 124 PSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVG 176 ++ +I + EL LL G+G D KC + G ++S + G VC Sbjct: 117 KAMDLEILARTFELKLLNATGYGFDFEKCCICGKKINKSNYLSIQYYGGVCSDCT 171 >gi|283782940|ref|YP_003373694.1| DNA repair protein RecO [Gardnerella vaginalis 409-05] gi|298253428|ref|ZP_06977220.1| DNA repair protein RecO [Gardnerella vaginalis 5-1] gi|283442174|gb|ADB14640.1| DNA repair protein RecO [Gardnerella vaginalis 409-05] gi|297532823|gb|EFH71709.1| DNA repair protein RecO [Gardnerella vaginalis 5-1] Length = 248 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 69/209 (33%), Gaps = 62/209 (29%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++D+A++L GE + I+ ++T+++G+ + + RL Sbjct: 4 YRDEAVVLRTFPLGEADRIVVLLTKRHGKVRAVAKGVR--------------------RL 43 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 G R E L LL+ L + V + + E Y+ N+ L Sbjct: 44 KSRFGG-RLEPL-MRVDLLLAQGKSLDVVSQAVSIAAYAGEICADYTSYEYANVMLEVVD 101 Query: 123 -------------------------------------IPSVIGKIFVQIELMLLKNIGFG 145 P IG ++ L L G+ Sbjct: 102 LLVSNEYTDEYRREYQDTLGQYRLLTAALLSLSKHKHSPDAIGVSYI---LRALSLAGWS 158 Query: 146 LDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L CVV G +DL + SP +GG +C S Sbjct: 159 PRLQACVVCGKNEDLCYFSPCAGGMMCAS 187 >gi|312864401|ref|ZP_07724634.1| DNA repair protein RecO [Streptococcus downei F0415] gi|311100122|gb|EFQ58333.1| DNA repair protein RecO [Streptococcus downei F0415] Length = 251 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 72/210 (34%), Gaps = 11/210 (5%) Query: 1 MYWQD-DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R+Y E + ++++ T G+ + FV++ ++ ++Q L + Sbjct: 1 MQTKESRGLVLFNRNYREDDKLVKIFTETAGKRMFFVKHISRSKLASVIQPLTLADFLMK 60 Query: 60 SRLAQNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 L E ++ + L Y + + + + L+ L Sbjct: 61 I-NEDGLSYLDDYREVETFKTINEDIF---LLAYASYLVALADAAIEDGQHDALLFAFLV 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + + E+ +L+ G L+ CV S K G +C Sbjct: 117 KTLELMEQGLDYEILTNIFEVQILERFGVRLNFHDCVFCHRVGLPFDFSYKYSGLLCPQH 176 Query: 176 GL--PYAEKMLVLPSFLWKEEQTIDADSLK 203 Y + +L QTI + L+ Sbjct: 177 YEKDSYRSHLDPNVPYLLDRFQTISFEDLQ 206 >gi|118581288|ref|YP_902538.1| DNA repair protein RecO [Pelobacter propionicus DSM 2379] gi|166221903|sp|A1AT10|RECO_PELPD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118503998|gb|ABL00481.1| DNA replication and repair protein RecO [Pelobacter propionicus DSM 2379] Length = 246 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 65/180 (36%), Gaps = 3/180 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 A +L YG+ + I+ + T ++GR F R ++ R + L+ + + + Sbjct: 7 QAYVLSTLDYGDSDRIVALFTLEHGRIKAFARRARNSRRRFGAALEIFARIEAHVEIKQG 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 G + E+ + Y L + + PE P L+ +L +L+ + Sbjct: 67 GLSGLRQAEIDCIYPGIRGDLGRIAYALYACELVDAMTPEGHPLPRLFRLLAAYLDRLEA 126 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ LL +G+ L C G D + G VCR+ + Sbjct: 127 YPASEQERRFFEINLLNILGYRPSLEACSRCGTPFDDRGALLLDDGELVCRACTGHGRDM 186 >gi|260903905|ref|ZP_05912227.1| DNA repair protein RecO [Brevibacterium linens BL2] Length = 242 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 24/219 (10%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWR 59 ++D+ I+L GE + I+ V+TR +G + + + + L+ LV Sbjct: 3 NYRDEGIVLQGHKLGEADRIVTVLTRSHGLIRAVAKGIRRTKSRFGSRLEPFMLVD---- 58 Query: 60 SRLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL-YDM 113 L ++G + E++E + + + + E EP + + Sbjct: 59 --LQCHVGRSLDIVTQVELIEPFARGIGADYDAYSAASVMAETAARITEVEPQSRTHFLL 116 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + ++ + + LL+ + G+ L C G S GGA Sbjct: 117 LVSAIRSLCNGEHPPRLAL--DAYLLRAMSVAGWAPSLLDCAQCGSPGPHRAFSASLGGA 174 Query: 171 VCRS-----VGLPYAEKMLVLPSFLWKEEQTIDADSLKS 204 VC + LP + + + + L + + ++ L Sbjct: 175 VCTTCRPSGAALPDTDALEHMAALLSGDWERAESSDLHD 213 >gi|149910153|ref|ZP_01898799.1| DNA repair protein RecO [Moritella sp. PE36] gi|149806739|gb|EDM66703.1| DNA repair protein RecO [Moritella sp. PE36] Length = 242 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 56/151 (37%), Gaps = 7/151 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 A +L R + E +++++ T G+ R G+ + ILQ L+ + + + Sbjct: 6 AFVLHRRPFKESSLLIDFFTINDGKISLVGRAGRGRKNSQSAILQPFTLLNIAYAGK--G 63 Query: 65 NLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L R E + + LS L+R L + EL+ L Sbjct: 64 GLKSMRQVEAVSNSLP--LSGRHLYASFYLNELLYRLLASEQANPELFSHYQNALLALAK 121 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + + E L++ +G+ L+ C T Sbjct: 122 QQPLEPLLREFEFNLMQCLGYIGALSYCADT 152 >gi|146317683|ref|YP_001197395.1| DNA repair protein RecO [Streptococcus suis 05ZYH33] gi|146319875|ref|YP_001199586.1| DNA repair protein RecO [Streptococcus suis 98HAH33] gi|223932387|ref|ZP_03624390.1| DNA repair protein RecO [Streptococcus suis 89/1591] gi|253750945|ref|YP_003024086.1| DNA repair protein RecO [Streptococcus suis SC84] gi|253752844|ref|YP_003025984.1| DNA repair protein RecO [Streptococcus suis P1/7] gi|302023128|ref|ZP_07248339.1| DNA repair protein RecO [Streptococcus suis 05HAS68] gi|330831873|ref|YP_004400698.1| DNA repair protein RecO [Streptococcus suis ST3] gi|166221913|sp|A4VYJ7|RECO_STRS2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221915|sp|A4VSA6|RECO_STRSY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145688489|gb|ABP88995.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus suis 05ZYH33] gi|145690681|gb|ABP91186.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus suis 98HAH33] gi|223899068|gb|EEF65426.1| DNA repair protein RecO [Streptococcus suis 89/1591] gi|251815234|emb|CAZ50798.1| DNA repair protein RecO [Streptococcus suis SC84] gi|251819089|emb|CAR44123.1| DNA repair protein RecO [Streptococcus suis P1/7] gi|292557486|gb|ADE30487.1| Recombination protein O [Streptococcus suis GZ1] gi|319757194|gb|ADV69136.1| DNA repair protein RecO [Streptococcus suis JS14] gi|329306096|gb|AEB80512.1| DNA repair protein RecO [Streptococcus suis ST3] Length = 260 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 11/210 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + ++L R++ E + ++++ T + G+ + FV++ ++ +Q + Sbjct: 1 MERIETRGLVLYNRNFREDDKLVKIFTEKAGKRMFFVKHASKSKLVASIQPLTYADFIVK 60 Query: 60 SRLAQNLGE----FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 L + + ++ + S Y L L ++ L+ L Sbjct: 61 I-NDDGLSYIEDFHQVQPFKNINGDIFKLSYATYILALA---DAALQDKVYDPALFAFLV 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + E+ LL G L+ +C S K G +C Sbjct: 117 KTLDLMESGLDYEVLTNIFEIQLLGRFGISLNFHECAFCHRVGLPFDYSYKYSGVLCPQH 176 Query: 176 GLPYAEKMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q I D L+ Sbjct: 177 YQQDERRAYLDPNVPYLLDQFQAISFDELE 206 >gi|182418477|ref|ZP_02949771.1| DNA repair protein RecO [Clostridium butyricum 5521] gi|237666513|ref|ZP_04526498.1| DNA repair protein RecO [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377859|gb|EDT75403.1| DNA repair protein RecO [Clostridium butyricum 5521] gi|237657712|gb|EEP55267.1| DNA repair protein RecO [Clostridium butyricum E4 str. BoNT E BL5262] Length = 249 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 13/181 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNWRSR 61 A+I+ + Y E + ++ T + G+ VR + + + + L G + + Sbjct: 11 AVIIKTQDYRENDKLVWFYTEKLGKITAIVRGAKKSKSKFLSLTLPLCYGEYMVYKGK-- 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNC 120 NL + + + LL++ L + L E E +L+ L L Sbjct: 69 ---NLYTLQEGKIINSFQGLLNNLDKLTYSSYLCELIDIACEENEVNEKLFKDLVTILYL 125 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSVGLP 178 + +I ++ E+ LLK G+ L L C + + ++S S G VC Sbjct: 126 LNTDVLDYEILIRAFEIKLLKATGYSLTLDTCSICRKRLGVSNYISLSSFGGVCEECPKE 185 Query: 179 Y 179 + Sbjct: 186 H 186 >gi|163856076|ref|YP_001630374.1| DNA repair protein RecO [Bordetella petrii DSM 12804] gi|163259804|emb|CAP42105.1| DNA repair protein RecO [Bordetella petrii] Length = 195 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 14/147 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 A +L ++ E ++I++ +R++G + + ++P+L A + ++W + Sbjct: 13 AYMLHATAWRETSLIVQSFSREHGCVALVAKGAKRPYSVLRPVLSAFQPLLLSWSG-AGE 71 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSI----VPLFRFLPEREPCLELYDMLNIFLNC 120 R EV L L S L R LP + L+D + L Sbjct: 72 VKTLTRAEVAGLR-------PLAGTALMSAWYMNELLLRLLPREDAHPALFDAYDTALQQ 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLD 147 + + E LL+ G+G+D Sbjct: 125 LAGGTRAAGALRRFEWTLLRETGYGID 151 >gi|325275442|ref|ZP_08141373.1| DNA repair protein RecO [Pseudomonas sp. TJI-51] gi|324099418|gb|EGB97333.1| DNA repair protein RecO [Pseudomonas sp. TJI-51] Length = 227 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ T Q GR +R + + +++ + + R R + Sbjct: 8 PAYVLHSRAYKETSALVDFFTPQ-GRMRAVLRRARG-KGGSLVRPFVPLELELRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G + + A L GL L R LP P + L++ + L Sbjct: 66 NVGR----MDSAGIAAWLHGDALFSGLYLNELLMRLLPAEAPFVALFEHYALTLQALAEG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL +G+ L++ Sbjct: 122 RPLEPLLRSFEWRLLDELGYAFSLSQ 147 >gi|332686713|ref|YP_004456487.1| DNA recombination and repair protein RecO [Melissococcus plutonius ATCC 35311] gi|332370722|dbj|BAK21678.1| DNA recombination and repair protein RecO [Melissococcus plutonius ATCC 35311] Length = 265 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 10/174 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG--QSHRMQPILQAGNLVRVNWRSRLAQ 64 IIL + + EK+ ++++ T +G+ + V++ +++ + P + R Sbjct: 8 GIILFTKQFKEKDKLVKIFTESHGKLMFLVKDAYRKNNPLIPAILPFTKAVYIGDFR-HD 66 Query: 65 NLGEF--RFEVLESHCAK--LLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L EV + + ++ Y L + + +R LY N L Sbjct: 67 GLSFLNNSKEVTSFRNIQQDIFINAYATYILNLV---DAAIEDRVYDPLLYQFTNQALTA 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + I E+ LL G + C V G T SPK G +C Sbjct: 124 LEEGKDAEIITNIFEVQLLHRFGVIPEWHACAVCGNTNGKFDFSPKYSGILCEK 177 >gi|331698248|ref|YP_004334487.1| DNA repair protein recO [Pseudonocardia dioxanivorans CB1190] gi|326952937|gb|AEA26634.1| DNA repair protein recO [Pseudonocardia dioxanivorans CB1190] Length = 246 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D ++L V+ GE + I+ ++TR++G+ + + R + L+ N V V + Sbjct: 4 YRDTGVVLRVQKLGEADRIVTLLTRRHGKLRAVAKGVRRTRSRWGARLEPFNHVDVQCYT 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIF 117 R + E +++ A ++ + G + R + E EP L +Y +L Sbjct: 64 GRSLD--VVTQAETVDAFGAGIVDDYGRYTAGCAILETADRLVSEEGEPALRVYLLLVGA 121 Query: 118 LNCHK----IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 + PS++ F+ L + + G+ +T+C S GGAVC Sbjct: 122 IRAMAGRERDPSLVLDAFL---LRAMSHAGWAPAITECAKCAEPGPHRAFSVAGGGAVCP 178 Query: 174 SVGLP 178 P Sbjct: 179 RCRPP 183 >gi|158313952|ref|YP_001506460.1| DNA repair protein RecO [Frankia sp. EAN1pec] gi|158109357|gb|ABW11554.1| DNA repair protein RecO [Frankia sp. EAN1pec] Length = 262 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 85/233 (36%), Gaps = 24/233 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR- 59 ++D+ ++L + E + ++ V+TR+ GR R + S R L+ G V + Sbjct: 23 YRDEGVVLRTAPFAEADRVVTVLTRRNGRVRAVARGVRRTSSRFGARLEPGTHVDLQLHE 82 Query: 60 SRL------AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R A LG + + + + L++ L ER+P L L+ + Sbjct: 83 GRSLDTVTQADILGAYGATIAQEYARYT----AAAVMLETAERLTSE--ERQPALRLFLL 136 Query: 114 LNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L + + L L G+G+ L +C + G +S GG VC Sbjct: 137 LVGGLRTLAGGERPPSLVLDAFLLRSLAVSGYGMALDECALCGEPGPHHSLSVPGGGVVC 196 Query: 173 RSV-------GLPYAEKMLV-LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 P A ++L L W + DA + A + +L + Sbjct: 197 PECRPRGAASTSPAAVRLLADLLHGDWDGAEASDARVRREAGGIVAAYLQWHL 249 >gi|313896076|ref|ZP_07829630.1| DNA repair protein RecO [Selenomonas sp. oral taxon 137 str. F0430] gi|312975501|gb|EFR40962.1| DNA repair protein RecO [Selenomonas sp. oral taxon 137 str. F0430] Length = 242 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 13/182 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGN---LVRVN 57 M + + IILG +++GE + ++ V TR+ G R + L AG V + Sbjct: 1 MLYTAEGIILGAKNWGEADKVMTVFTRERGMLRAAAFG--CRRPRSAL-AGAMQMFVHAD 57 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNI 116 ++ L + V+ +H AKL + L + + R FLPE P + +D L Sbjct: 58 FQLAEGPRLETVKTAVVRAHHAKLSADLTALAYATFVAEVVREFLPEGVPDEQFFDRLAE 117 Query: 117 FLNCHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCR 173 L + P V V L +L G +C+ G + GGA+C Sbjct: 118 ILTAFERRNPRVAALAAV---LQILSAAGLRQTYERCLHCGTEITGDAFFHAGEGGALCP 174 Query: 174 SV 175 S Sbjct: 175 SC 176 >gi|312143996|ref|YP_003995442.1| DNA repair protein RecO [Halanaerobium sp. 'sapolanicus'] gi|311904647|gb|ADQ15088.1| DNA repair protein RecO [Halanaerobium sp. 'sapolanicus'] Length = 255 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 10/181 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN-WR 59 ++ +AI+L GE + ++ + T++ G+ R + ++ + ++ Sbjct: 4 FETEAIVLKQFDLGESDRLITLYTKENGKVKAVARGARKGNKSRSGLVLPFSHHHFTLYK 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + E + + + + + R E E L+ +L + L Sbjct: 64 GRSLAKINH--IESIAMNSKLREDLDYMAHASVAAEYIERAGLEFEADQALFSLLAVILE 121 Query: 120 CHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDL---LWVSPKSGGAVCRS 174 +F E LL +G ++ C V G +L V K GG++CR Sbjct: 122 YMNKAEKNELLFYLTVFEAKLLLLLGVKPEIESCTVCGEKINLKGFTAVGVKEGGSICRE 181 Query: 175 V 175 Sbjct: 182 C 182 >gi|148655450|ref|YP_001275655.1| DNA repair protein RecO [Roseiflexus sp. RS-1] gi|172048082|sp|A5USV2|RECO_ROSS1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148567560|gb|ABQ89705.1| DNA repair protein RecO [Roseiflexus sp. RS-1] Length = 283 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 67/207 (32%), Gaps = 39/207 (18%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++ +AII+ GE + ++ ++T GR R + SRL Sbjct: 6 YRTEAIIIRRSDAGEADRLVTILTPL-GRQRVVARGARK----------------LHSRL 48 Query: 63 AQNLGEFRFEVLES----------------HCAKLLSSSLFLYGLQSIVPLFRFLPEREP 106 A ++ F +L +L + + L L E E Sbjct: 49 AGHIELFTHTMLMLAIGRNLHIVTQSSPLDRFERLRTDLERIGAAYYAAELVDRLVEEEA 108 Query: 107 -CLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWV 163 + +L L + I EL LL +G+ L +C G T+ Sbjct: 109 ENKRAFSILLGTLRALNAGAAIDLTLRAYELHLLDALGYRPQLYECAACGAVLTEATNRF 168 Query: 164 SPKSGGAVCRSVGLPYAEKMLVLPSFL 190 SP +GGA+C L LP L Sbjct: 169 SPVTGGALCPDCAGVDR---LALPMSL 192 >gi|304386731|ref|ZP_07369001.1| recombination protein O [Neisseria meningitidis ATCC 13091] gi|304339189|gb|EFM05273.1| recombination protein O [Neisseria meningitidis ATCC 13091] Length = 248 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 31/224 (13%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L + V +W Sbjct: 9 HEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD L Sbjct: 66 ------YGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLKLTAREDPMPELYDALA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLW-------VSP-- 165 + + E LL +G DL G + D + V P Sbjct: 120 KVMEAVCREANHIADLRCFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVC 179 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + A+ G + L+ +E A+SL+ A ++T Sbjct: 180 RDTDALSHEAGAIVEGQSLI----DLREGSFRTAESLQQALKIT 219 >gi|297242778|ref|ZP_06926716.1| DNA repair protein RecO [Gardnerella vaginalis AMD] gi|296888989|gb|EFH27723.1| DNA repair protein RecO [Gardnerella vaginalis AMD] Length = 248 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 68/209 (32%), Gaps = 62/209 (29%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++D+A++L GE + I+ ++T+++G+ + + RL Sbjct: 4 YRDEAVVLRTFPLGEADRIVVLLTKRHGKVRAVAKGVR--------------------RL 43 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 G R E L LL+ L + V + + E Y+ N+ L Sbjct: 44 KSRFGG-RLEPL-MRVDLLLAQGKSLDVVSQAVSIAAYAGEICADYTSYEYANVMLEVVD 101 Query: 123 -------------------------------------IPSVIGKIFVQIELMLLKNIGFG 145 P IG ++ L L G+ Sbjct: 102 LLVSNEYTDEYRREYQDTLGQYRLLTAALLSLSKHKHSPDAIGMSYI---LRALSLAGWS 158 Query: 146 LDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L CVV G +DL + SP GG +C S Sbjct: 159 PRLQACVVCGKNEDLCYFSPCIGGMMCAS 187 >gi|172041007|ref|YP_001800721.1| DNA repair protein RecO [Corynebacterium urealyticum DSM 7109] gi|171852311|emb|CAQ05287.1| DNA repair protein RecO [Corynebacterium urealyticum DSM 7109] Length = 252 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 14/188 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-W 58 ++D+A +L GE ++IL ++TR +G + + + + L + V V + Sbjct: 9 NFRDEAFVLRSYKLGEADLILVLLTRSHGVVRAVAKGIRKTKSRFGARLDRFSKVNVQVY 68 Query: 59 RSRLAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNI 116 R R LG+ L S+ +++ + +++ L + L E ++ L+ Sbjct: 69 RGRS---LGKITDTASLASYAGPIVADVDKYFAGAAMLELAQILSTAEGSSEAVFSSLDA 125 Query: 117 FLNCH-----KIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L P + + L L G+ L C G P++GG+ Sbjct: 126 GLALLAGTDPATPELPPVSVADRFVLHGLAEAGWMPSLVDCAQCGRPGPHRAFHPRAGGS 185 Query: 171 VCRSVGLP 178 VC P Sbjct: 186 VCVLCRPP 193 >gi|293556345|ref|ZP_06674926.1| DNA repair protein RecO [Enterococcus faecium E1039] gi|291601412|gb|EFF31683.1| DNA repair protein RecO [Enterococcus faecium E1039] Length = 270 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ Q+ + P L Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKEIHRQNQPLAPALLPFTEAVY----- 60 Query: 62 LAQNLGEFRFEVL-------ESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYD 112 +G FR E L + H + + +FL YG + + + + + L+ Sbjct: 61 ----IGNFRSEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQ 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 117 FTQQALQRMDQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVIC 176 Query: 173 RS 174 Sbjct: 177 EK 178 >gi|169338088|ref|ZP_02622396.2| DNA repair protein RecO [Clostridium botulinum C str. Eklund] gi|169294393|gb|EDS76526.1| DNA repair protein RecO [Clostridium botulinum C str. Eklund] Length = 242 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 11/174 (6%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQA---GNLVRVNWRSRLA 63 +L + Y E + ++ + T + G+ + + ++ + + Q G V +S + Sbjct: 1 MLKTQDYKENDKLVWLFTEKIGKVCAIAKGAKKNKSKFMSSTQTFCFGEYVLFRGKSLYS 60 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 N E+++S L YG + L + E EL+ K Sbjct: 61 IN----EVEIIDSFQNLLKDMDTITYGSYLCELILIALEQEESDRELFKDFIKSFYFLKN 116 Query: 124 PSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSV 175 ++ +I + E LLK G+G D KC + G ++S + G VC S Sbjct: 117 HAMDLEILARTFEFKLLKATGYGFDFEKCCICGKRINKSNYLSIQYYGGVCDSC 170 >gi|319638209|ref|ZP_07992972.1| DNA repair protein [Neisseria mucosa C102] gi|317400482|gb|EFV81140.1| DNA repair protein [Neisseria mucosa C102] Length = 247 Score = 64.8 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPVFLLASAPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD+L Sbjct: 66 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + + E LL +GF DL Sbjct: 120 ETMKTICCEANHIAALRRFEWTLLTRLGFAPDL 152 >gi|15838839|ref|NP_299527.1| DNA repair protein RecO [Xylella fastidiosa 9a5c] gi|17865569|sp|Q9PB96|RECO_XYLFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|9107402|gb|AAF85047.1|AE004037_8 DNA repair protein RecO [Xylella fastidiosa 9a5c] Length = 243 Score = 64.8 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 7/161 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVNWRS 60 + A +L VR + E ++++EV+T+ YGR R Q + ++ LQ +R + Sbjct: 5 HEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRFSAIQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R LG+ R + A L L L R +P P ELY + Sbjct: 65 RGE--LGQLR-QAEALDTAPRLKGEAMLASFYINELLLRLVPRHAPVNELYLAYSQTRER 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + + E +L+ +G G +L C G D Sbjct: 122 LRTSDSLAWSLRLFEREILETLGVGFNLE-CDANGTPLDPA 161 >gi|187477632|ref|YP_785656.1| DNA repair protein [Bordetella avium 197N] gi|115422218|emb|CAJ48742.1| DNA repair protein [Bordetella avium 197N] Length = 195 Score = 64.8 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 14/147 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 A +L ++ E ++I++ +R++G + + ++P+L A + ++W + Sbjct: 13 AYMLHATAWRETSLIVQSFSREHGCIALVAKGAKRPYSVLRPVLSAFQPLLMSWSGG-GE 71 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSI----VPLFRFLPEREPCLELYDMLNIFLNC 120 R EV H L L S L R LP + L+D L Sbjct: 72 VKTLIRAEVAGVH-------PLGGAALMSAWYMNELLLRLLPREDAHPLLFDAYETALQQ 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLD 147 + + E +LL+ G+G+D Sbjct: 125 LAGGTRAAGALRRFEWVLLRETGYGVD 151 >gi|283769576|ref|ZP_06342472.1| DNA repair protein RecO [Bulleidia extructa W1219] gi|283103844|gb|EFC05230.1| DNA repair protein RecO [Bulleidia extructa W1219] Length = 244 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 5/187 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M Q +L Y EK +I+ ++T++ G+ + + + + LQ V V + Sbjct: 1 MNDQTVGFVLKEVPYQEKAVIVSLLTKE-GKISFIAKGIRNINSKNAAALQLFTKVEVEY 59 Query: 59 RSRLAQNL-GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + L R + L + + + + R + E LY ++ Sbjct: 60 DHREGKELQVLKRAKPLCFYRHVYSDLQISSMASVLVDIVDRLVVLNEDTSNLYILIEKS 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + IFV LL+ GF ++ CV G Q+++ S K GG +C Sbjct: 120 FDLWESNEKANMIFVLSLSTLLQEFGFEPNMDACVHCG-KQEVVSFSSKEGGFLCADHAQ 178 Query: 178 PYAEKML 184 M+ Sbjct: 179 ELRNPMM 185 >gi|187934258|ref|YP_001885108.1| DNA repair protein RecO [Clostridium botulinum B str. Eklund 17B] gi|187722411|gb|ACD23632.1| DNA repair protein RecO [Clostridium botulinum B str. Eklund 17B] Length = 249 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 17/187 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVN 57 ++ A+I+ + + E + ++ + T + G+ + + + + L G + Sbjct: 7 FESKAVIIKSQDFKENDKLVWLYTEELGKIAAIAKGAKKSKNKTFSITLPLCYGEYM--- 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAK--LLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDML 114 L + + + + + LL + L + L P+ E +++ L Sbjct: 64 ----LYKGKNLYTIQEGKIINSFQGLLENLDKLTYSSYLCELIDICTPDDEKNKQIFIDL 119 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVC 172 ++ ++ V+ EL LLKN G+ L+L C + ++S + G VC Sbjct: 120 VTTFYLLDTNALEYELLVRAFELKLLKNTGYSLELDSCCMCKKKIPSSNYISLSNYGGVC 179 Query: 173 RSVGLPY 179 Y Sbjct: 180 DECPKEY 186 >gi|156741638|ref|YP_001431767.1| DNA repair protein RecO [Roseiflexus castenholzii DSM 13941] gi|156232966|gb|ABU57749.1| DNA repair protein RecO [Roseiflexus castenholzii DSM 13941] Length = 266 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 80/223 (35%), Gaps = 29/223 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQP----------ILQA 50 ++ +AII+ GE + +L ++T G+ + + R+ +L Sbjct: 2 YRCEAIIIRRSDSGEADRVLTILTPS-GKQRVIAKGARKIHSRLAGHIELFTHTTLMLAI 60 Query: 51 G-NLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE 109 G NL V S L RFE L + ++ + + R + E Sbjct: 61 GRNLHIVTQSSPLD------RFEHLRADLERI------GAAYYAAELVDRLIAEESENRR 108 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKS 167 +++L L + I EL LL +G+ L +C GV T+ SP + Sbjct: 109 AFELLLGALRALNAGAAIDLTLRAYELHLLDAVGYRPQLYECAACGVRLTEATDRFSPAA 168 Query: 168 GGAVCRSVGLPYAEKM-LVLPSFLWKEEQTIDADSLKSAFQLT 209 GGA+C + + L +F I + +++ Sbjct: 169 GGALCPQCAGADRRALPMRLSTFKLLRYMQIQPPEIAGELRVS 211 >gi|323703323|ref|ZP_08114973.1| DNA repair protein RecO [Desulfotomaculum nigrificans DSM 574] gi|323531686|gb|EGB21575.1| DNA repair protein RecO [Desulfotomaculum nigrificans DSM 574] Length = 256 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---------- 50 ++ DAIIL R E + IL + + Q G+ R + +Q Sbjct: 4 YKLDAIILKSRDMREADKILTLYSIQQGKQRVVAHGAAKPKSRKRGAVQPFCYSSLMLHR 63 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 G + ++ L ++ E R ++ A ++ FL E EP + Sbjct: 64 GKELDSVSQAELKESFPELRTDLDRLAGAAYMAE-----------LADGFLGEGEPNQAI 112 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL----LWVSPK 166 + +L L+ E L+ GF +L C TG Q L + + Sbjct: 113 FGLLLATLHLMAKGDT-QLALRAFEAKLMWLTGFKPELDHC--TGCGQSLTGTKVRFGLR 169 Query: 167 SGGAVCRSVGL 177 GG +C Sbjct: 170 HGGLLCPDCAA 180 >gi|46205206|ref|ZP_00048866.2| COG1381: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 194 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++DDAI+L + GE + I+ ++TR++G+ + + S R L+ LV V + Sbjct: 4 YRDDAIVLRAQKLGEADRIVTLLTREHGKVRAVGKGVRRTSSRFGARLEPFMLVDVQLYA 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREP----CLELYDM 113 R + + E + + ++ L+ G + R + EREP L Sbjct: 64 GRSLDTV--TQAETIGPYARRICEDYGLYTAGAVMLETAERLVADEREPAVQQYWLLAGA 121 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L P ++ ++ L L G+ C G + GGAVC Sbjct: 122 LRALSEHAHAPGLVLDSYL---LRALAVAGWAPSFVDCARCGEPGPHHAFAVAQGGAVCS 178 Query: 174 SVGLP 178 P Sbjct: 179 RCRPP 183 >gi|326803487|ref|YP_004321305.1| DNA repair protein RecO [Aerococcus urinae ACS-120-V-Col10a] gi|326650240|gb|AEA00423.1| DNA repair protein RecO [Aerococcus urinae ACS-120-V-Col10a] Length = 255 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 6/163 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL-QA-GNLVRVNWRSRLA 63 I+L R Y EK++++++ T+ YG+ + FVRN + +L Q VR + + Sbjct: 9 PGIVLYQRPYKEKDLLVKIFTQPYGKRMFFVRNIH--KPNNVLKQPSFAFVRAEYIGTIN 66 Query: 64 QNLGEFRFEVLESHCA-KLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH 121 F EV +S + + L +P+RE L+ L L+ Sbjct: 67 DRGFSFLKEVKSMTFPKHTMSDLEAMAYASYLCHLVDASMPDREVDQVLFTQLEQALDKI 126 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 + I +E+ LL G L C + Q + S Sbjct: 127 ETGFNPAIISNILEVQLLAKFGVMPQLHACQICQEDQGIFDFS 169 >gi|323464339|gb|ADX76492.1| DNA repair protein RecO [Staphylococcus pseudintermedius ED99] Length = 256 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 16/197 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG-RHLGFVRNGQSHR--MQPILQA---GNLV 54 M + II+ YGE + I+ ++ ++G + VR + + +Q Q G + Sbjct: 1 MLVKQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMVRRAKKIKSGLQATTQIFVQGLFI 59 Query: 55 RVNWRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 W+ +G +VL + Y + + R + E +Y + Sbjct: 60 YNQWKG-----MGTLTSVDVLNLNYELRQDIYAHSYASLCLETIDRAMETDEINPTMYRL 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAV 171 L+ + + I + L + GF +DL+KCV+TG T L S K G + Sbjct: 115 LDFTFDRFQQGVSPQLIANIVMLKCMPRFGFDVDLSKCVMTGETNPAKLTHFSFKFDGII 174 Query: 172 CRSVGLPYAEKMLVLPS 188 V + L + Sbjct: 175 ATEVTHRDPHAL-PLSN 190 >gi|296112102|ref|YP_003622484.1| DNA repair protein RecO [Leuconostoc kimchii IMSNU 11154] gi|295833634|gb|ADG41515.1| DNA repair protein RecO [Leuconostoc kimchii IMSNU 11154] Length = 263 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 19/239 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR-SRLA 63 ++L R Y + ++++ ++T G R + + Q LV + Sbjct: 6 GVVLYTRQYKDNDLLVRILTETGGLRTFLARGAKRPKSHLSAATQPYTLVIFEGAFPKRN 65 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNCH 121 Q LG + + ++ +L+ IV L E +P Y+ L + L Sbjct: 66 QGLGYINDIQHITNYP-RLMDDIEANAYAALIVSLLDEIFEEGDPLTRWYNQLVLALQKL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL +G + ++G + S K G + + Sbjct: 125 NEGLDPQIIANIFEIQLLVPLGVAPNWRVDPISGQSDGRFDYSEKYNGIISEAHYELDDH 184 Query: 182 KMLV-------LPSF----LWKEEQTIDADSLKSAF-QLTDYFLNKYA-LQHNIIHCHL 227 ++++ L F L + Q +++ K ++ DY + L+ Sbjct: 185 RLMLDQKTMFYLRQFSVIDLRQINQISVSNTTKRGLQRVIDYIYERQVGLKPRAKTFIE 243 >gi|27468171|ref|NP_764808.1| DNA repair protein RecO [Staphylococcus epidermidis ATCC 12228] gi|57867008|ref|YP_188709.1| RecO family DNA repair protein [Staphylococcus epidermidis RP62A] gi|251810983|ref|ZP_04825456.1| recombination protein RecO [Staphylococcus epidermidis BCM-HMP0060] gi|282876008|ref|ZP_06284875.1| DNA repair protein RecO [Staphylococcus epidermidis SK135] gi|293366473|ref|ZP_06613150.1| DNA repair protein RecO family protein [Staphylococcus epidermidis M23864:W2(grey)] gi|38258560|sp|Q8CP22|RECO_STAES RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67461257|sp|Q5HNY1|RECO_STAEQ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|27315717|gb|AAO04852.1|AE016748_86 DNA repair protein RecO [Staphylococcus epidermidis ATCC 12228] gi|57637666|gb|AAW54454.1| DNA repair protein RecO family [Staphylococcus epidermidis RP62A] gi|251805493|gb|EES58150.1| recombination protein RecO [Staphylococcus epidermidis BCM-HMP0060] gi|281295033|gb|EFA87560.1| DNA repair protein RecO [Staphylococcus epidermidis SK135] gi|291319242|gb|EFE59611.1| DNA repair protein RecO family protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329725324|gb|EGG61807.1| DNA repair protein RecO [Staphylococcus epidermidis VCU144] gi|329737236|gb|EGG73490.1| DNA repair protein RecO [Staphylococcus epidermidis VCU028] Length = 253 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 17/185 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M + II+ YGE + I+ ++ + R ++ +++ LQA + V Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMAR--RAKKVKSGLQANTQLFVYGLF 58 Query: 58 ----WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 WR +G +V+ H L Y + R + E E YD Sbjct: 59 IYNKWRG-----MGTLNSVDVINQHYELQLDLFESSYASLCAETIDRSMEENEVSKYNYD 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGA 170 +L L+ + + V + L + GF C +TG+ L+ S K GA Sbjct: 114 LLQFVLSKINEGTPAQLMSVIVLLKNMSKFGFTASFDHCAITGIQDQSKLIAYSFKFDGA 173 Query: 171 VCRSV 175 + S Sbjct: 174 ISESA 178 >gi|253681466|ref|ZP_04862263.1| DNA repair protein RecO [Clostridium botulinum D str. 1873] gi|253561178|gb|EES90630.1| DNA repair protein RecO [Clostridium botulinum D str. 1873] Length = 238 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 67/175 (38%), Gaps = 11/175 (6%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQA---GNLVRVNWRSRLA 63 +L + Y E + ++ + T + G+ + + ++ + + Q G V R + Sbjct: 1 MLKTQDYKENDKLVWLFTEKIGKVCAIAKGAKKNKSKFMSSTQVFCFGEYVLF--RGKSL 58 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 N+ E ++++S L YG + L + E EL+ K Sbjct: 59 YNINE--IDIIDSFQNLLKDMDTITYGSYFCELILIALEQEESNRELFKDFIKSFYFIKN 116 Query: 124 PSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVG 176 ++ +I + EL LL G+G D KC + G ++S + G VC Sbjct: 117 KAMDLEILARTFELKLLNASGYGFDFQKCCICGKKINKSNYLSIQYYGGVCSECT 171 >gi|331701381|ref|YP_004398340.1| DNA repair protein recO [Lactobacillus buchneri NRRL B-30929] gi|329128724|gb|AEB73277.1| DNA repair protein recO [Lactobacillus buchneri NRRL B-30929] Length = 253 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 28/182 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 I+L ++Y E +++++ +TR++G+ + VR + R M+ + Sbjct: 11 GILLYTKAYREHDLLIKFLTREFGKKMFLVRGAKRPRFKMRSAILPFTY----------- 59 Query: 65 NLGEFRFEVLESHCAKLLSSSLF-------------LYGLQSIVPLFRFLPEREPCLELY 111 G + ++ ES + +L+ Y + + P+ EP Y Sbjct: 60 --GLYGGDIKESGLSYILNDKQLVHFQNISEDITKNAYATYIMSLIDMAYPDGEPIATWY 117 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 D L L I E+ LL G + C + T S GG + Sbjct: 118 DKLLTGLQLIDQGFDEQIITNIFEVQLLNAYGVAPNWVDCTICHRTDLPFDYSEAYGGLL 177 Query: 172 CR 173 C+ Sbjct: 178 CQ 179 >gi|291533047|emb|CBL06160.1| DNA repair protein RecO [Megamonas hypermegale ART12/1] Length = 246 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 29/188 (15%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 + + ++LGV+++G + I+ +++ YG+ + + +Q + + + Sbjct: 4 YTTEVLVLGVKNWGNADKIVTLLSPTYGKITAAAYGCRRPKSPLAASMQPFSWLDIQLSK 63 Query: 61 -------RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYD 112 R ++ G F + L + I L + L E EP E+Y+ Sbjct: 64 GEKMDTVRQCEHKGFF---------SDLYEDLTAMAYASFIAELAKELCSEDEPQAEIYE 114 Query: 113 MLNIFLNCHK--IPSVIGK--IFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKS 167 L L C P + + E G L ++C + G + Sbjct: 115 KLLKILPCLTKFNPRICALASAYQIFE-----YTGCQLHYSQCALCGSKIEGDCHFDAMQ 169 Query: 168 GGAVCRSV 175 GGA+C S Sbjct: 170 GGAICTSC 177 >gi|241760492|ref|ZP_04758585.1| DNA repair protein RecO [Neisseria flavescens SK114] gi|241318996|gb|EER55498.1| DNA repair protein RecO [Neisseria flavescens SK114] Length = 247 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPIFLLASAPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD+L Sbjct: 66 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + + E LL +GF DL Sbjct: 120 ETMKTICCEANHIAALRRFEWTLLTRLGFAPDL 152 >gi|171742448|ref|ZP_02918255.1| hypothetical protein BIFDEN_01560 [Bifidobacterium dentium ATCC 27678] gi|283456466|ref|YP_003361030.1| DNA repair protein RecO [Bifidobacterium dentium Bd1] gi|306822358|ref|ZP_07455737.1| recombination protein O [Bifidobacterium dentium ATCC 27679] gi|309802175|ref|ZP_07696284.1| DNA repair protein RecO [Bifidobacterium dentium JCVIHMP022] gi|171278062|gb|EDT45723.1| hypothetical protein BIFDEN_01560 [Bifidobacterium dentium ATCC 27678] gi|283103100|gb|ADB10206.1| DNA repair protein RecO [Bifidobacterium dentium Bd1] gi|304554356|gb|EFM42264.1| recombination protein O [Bifidobacterium dentium ATCC 27679] gi|308221255|gb|EFO77558.1| DNA repair protein RecO [Bifidobacterium dentium JCVIHMP022] Length = 242 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 17/184 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 +QD+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YQDEGVVLRTAKLGEADRIITLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVDVLVAE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL----PEREP--CLELYDM 113 R + + E + ++ + + I L ER + Sbjct: 64 GRSLDVISQA--ESISAYAGPICADYGAYAAANVIAETADKLVAGEHERMTMQYRLVLGA 121 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD---LLWVSPKSGGA 170 LN + IG +V + L G+ L CVV G D + S +GG Sbjct: 122 LNALAKHAHDSNAIGDSYV---MRALALAGWTPRLRACVVCGDPIDAGRTWYFSIPAGGV 178 Query: 171 VCRS 174 +C + Sbjct: 179 MCSA 182 >gi|606746|gb|AAB59995.1| unknown [Bacillus subtilis] Length = 114 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 5/115 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I+L YGE N I+ ++TR++G+ R + R+ + Q + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQP--FLYGSF 58 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + LG + E++ S L Y + R E++P L++ Sbjct: 59 LMQKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYVAELVDRGTEEKKPNPYLFE 113 >gi|297172258|gb|ADI23236.1| recombinational DNA repair protein (recF pathway) [uncultured nuHF2 cluster bacterium HF0770_13K08] Length = 263 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 17/160 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV--------N 57 D I+L + EK+ IL +T + G+ G + G+S L++GN + Sbjct: 7 DGIVLKTMDFKEKDCILTFLTAKVGKKAGILHGGKS------LRSGNAAKAELFVLNHFE 60 Query: 58 WRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLN 115 + + +L R E+ ES + S FL+ L + +PE + E +D+L Sbjct: 61 FSEKPNMDLVRIRKCELQESFPLVRKNYSKFLHASYFSELLLQCEIPELDSH-EYFDLLK 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 ++ +I + E++LLK +G +L C G Sbjct: 120 NAMSLLSESQTDTEIKLNFEILLLKLLGITPNLEICFQCG 159 >gi|319940341|ref|ZP_08014691.1| DNA repair protein recO [Streptococcus anginosus 1_2_62CV] gi|319810397|gb|EFW06739.1| DNA repair protein recO [Streptococcus anginosus 1_2_62CV] Length = 257 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 74/204 (36%), Gaps = 6/204 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ ++ P++Q LV ++ ++ Sbjct: 6 TSKGLVLYNRNFRENDKLVKIFTEQAGKRMFFVKHARNSKLNPVIQP--LVVADFLMKIN 63 Query: 63 AQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L ++ + + Y + + + E L+ L L Sbjct: 64 DDGLSYIDDYQEVTTFQHINHDLFAMAYATYVVALADTSIQDNEIDSALFAFLQKTLELM 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + E+ +L G L+ +C S G +C Sbjct: 124 EQGLDYEVLTNIFEIQILSRFGISLNFHECCFCHRIGLPFDFSFTYNGVLCPEHYGKDER 183 Query: 182 KMLVLP--SFLWKEEQTIDADSLK 203 + + P +L + Q + L+ Sbjct: 184 RSHLDPNIPYLLDQFQAVQYSELE 207 >gi|261380742|ref|ZP_05985315.1| DNA repair protein RecO [Neisseria subflava NJ9703] gi|284796460|gb|EFC51807.1| DNA repair protein RecO [Neisseria subflava NJ9703] Length = 247 Score = 64.0 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + E ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPVFLLASAPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD+L Sbjct: 66 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + + E LL +GF DL Sbjct: 120 KTMKTICCEANHIATLRRFEWSLLTRLGFAPDL 152 >gi|150015732|ref|YP_001307986.1| DNA repair protein RecO [Clostridium beijerinckii NCIMB 8052] gi|149902197|gb|ABR33030.1| DNA repair protein RecO [Clostridium beijerinckii NCIMB 8052] Length = 249 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 17/183 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-----LQAGNLVRVNWRSR 61 A+I+ + + E + ++ T + G+ VR + + + + L G + +S Sbjct: 11 AVIIKTQDFKENDKLVWFYTEKLGKITAIVRGAKKSKSKFLALTLPLCYGEYMVYKGKS- 69 Query: 62 LAQNLGEFRFEVLE--SHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFL 118 + + + LL+ L + L + E +EL+ L L Sbjct: 70 ------LYTLQEGKIIQSFQGLLNDLHKLTYSSYLCELIDIACTDNEINMELFKTLITTL 123 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVG 176 ++ ++ ++ EL LLK G+ L L C V ++S G +C Sbjct: 124 YLLNTDALDYELLIRAFELRLLKTTGYNLTLNNCSVCRKKISSSNYISLSHYGGICDECP 183 Query: 177 LPY 179 + Sbjct: 184 KEH 186 >gi|294787447|ref|ZP_06752700.1| DNA repair protein RecO [Parascardovia denticolens F0305] gi|315226983|ref|ZP_07868770.1| recombinational DNA repair protein (RecF pathway) [Parascardovia denticolens DSM 10105] gi|294484803|gb|EFG32438.1| DNA repair protein RecO [Parascardovia denticolens F0305] gi|315119433|gb|EFT82566.1| recombinational DNA repair protein (RecF pathway) [Parascardovia denticolens DSM 10105] Length = 248 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 83/220 (37%), Gaps = 19/220 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAG---NLVRVN 57 ++D ++L GE + I+ ++T ++G+ R + R + L+ +L+ Sbjct: 4 YRDQGLVLRAIKLGETDRIITILTSRHGKIRAVARGVRRTRSRFGSRLEPFMRDDLLIAQ 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFLPE-RE----PCLELY 111 R L + V+ ++ K+++ L + + + + + RE + Sbjct: 64 GRKELDT---VSQAVVISAYAPKIVADYEAYLSASVIVEAVDKVVSDLREGSESAHRQYL 120 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 + + L + G+ L C+V G DL + S +SGG + Sbjct: 121 LAVGALAALAAGKRPPALVENSFLLRSVSLAGWTPRLDSCLVCGRQTDLTYFSVESGGVM 180 Query: 172 CRSVGLPYAEKMLV-----LPSFLWKEEQTIDADSLKSAF 206 C+ +P + ++ L + L + + ++A + Sbjct: 181 CKDDHVPGSRRLSPQALFQLRALLMGDWKALEAQTSPEGR 220 >gi|171778348|ref|ZP_02919527.1| hypothetical protein STRINF_00378 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282879|gb|EDT48303.1| hypothetical protein STRINF_00378 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 251 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 10/203 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R+Y E + ++++ T G+H+ FV++ R +Q + + + L Sbjct: 8 GLVLYNRNYREDDKLVKIFTETNGKHMFFVKHASKSRFNSAIQPLTVAKFILKI-NETGL 66 Query: 67 GEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + A L S Y + S+ +P+ +L+ L L + Sbjct: 67 SFIEDYKEVDSFKEINADLFKLSYASY-VTSLA--DAAVPDGVADPQLFAFLKKTLLLME 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS--VGLPYA 180 + E+ +L+ G L+ +C S K G +C + Sbjct: 124 EGLDYEILTNIFEIQILERFGVSLNFHECAFCHRVGLPFDFSHKYSGLLCPEHYAKDEHR 183 Query: 181 EKMLVLPSFLWKEEQTIDADSLK 203 + +L Q I D LK Sbjct: 184 SHLDPNVLYLVDRFQAIQFDDLK 206 >gi|332703854|ref|ZP_08423942.1| DNA repair protein recO [Desulfovibrio africanus str. Walvis Bay] gi|332554003|gb|EGJ51047.1| DNA repair protein recO [Desulfovibrio africanus str. Walvis Bay] Length = 248 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + + +IL V + E + + ++T G F G R + L A NLV Sbjct: 1 MEFTEHGLILKVGRFREYDQWVRLLTPTRGILTAFAFGGSRSRRRFCGCLDALNLVLF-- 58 Query: 59 RSRLAQNLGEFRFEVLESHCA-KLLSSSLFLYGLQSIVPLFRFLPE----REPCLELYDM 113 ++R ++N+ + E L ++L G+ + +FL + +YD+ Sbjct: 59 KARSSRNMAYLQLEESTLLSGYPRLKANLPKLGMAANC--IKFLQAFQLGVDTSRAVYDL 116 Query: 114 LNIFLNCHKIP----SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 L + + GF D C + G Sbjct: 117 TLATLEALDDGGEDQDFWP---LFFRAAVAFESGFAPDFKSCHLCGKN 161 >gi|290579547|ref|YP_003483939.1| putative DNA repair protein [Streptococcus mutans NN2025] gi|254996446|dbj|BAH87047.1| putative DNA repair protein [Streptococcus mutans NN2025] Length = 251 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 83/210 (39%), Gaps = 11/210 (5%) Query: 1 MYWQD-DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R + E + ++++ T G+H+ FVR+ + ++ ++Q L+ N+ Sbjct: 1 MQTKETRGLVLYNRQFREDDKLVKIFTETSGKHMFFVRHATNSKLSSVIQP--LILANFI 58 Query: 60 SRLAQNLGEFRFEVLE--SHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNI 116 ++ + G E + S ++ + L +V L + + L+ L Sbjct: 59 LKINNH-GLSYIEDYKGVSLFKEINADIYKLAYATYLVSLADAAISDAVYDAPLFAFLIK 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW-VSPKSGGAVCRSV 175 L + E+ +L G L+ CV L + S + G +C Sbjct: 118 TLELMDEGLDYEILTNIFEIQILDRFGVQLNFHDCVFCHRV-GLAFDFSHRYSGLLCPEH 176 Query: 176 GL--PYAEKMLVLPSFLWKEEQTIDADSLK 203 PY + +L + QT+ DSLK Sbjct: 177 YEKDPYRSHLDPNVPYLLNQFQTLHFDSLK 206 >gi|289423883|ref|ZP_06425676.1| DNA repair protein RecO [Peptostreptococcus anaerobius 653-L] gi|289155660|gb|EFD04332.1| DNA repair protein RecO [Peptostreptococcus anaerobius 653-L] Length = 248 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 11/177 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 A++L + E +IIL + TR YG+ R Q ++ Q + R + Sbjct: 7 QAVVLKALKFKENDIILTLFTRNYGKVSAIARGAQKPKSKLIATSQVFSYNNYVLR-KQN 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL----N 119 ++ E ++S F Y + + L E + L+ +L L Sbjct: 66 DMYVVYQSESIKSFYNIATDFDAFSYASFIMKLVEGVLVEGQTNNRLFVLLVRTLFLYSE 125 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV-SPKSGGAVCRSV 175 P I F+ + L GF ++ C T V S GG VC Sbjct: 126 GVDNPKFILDAFI---VKFLDYTGFKPNVDACTSCSSTNYRKAVFSISDGGIVCDKC 179 >gi|71274464|ref|ZP_00650752.1| Recombination protein O, RecO [Xylella fastidiosa Dixon] gi|71901685|ref|ZP_00683761.1| Recombination protein O, RecO [Xylella fastidiosa Ann-1] gi|170730566|ref|YP_001775999.1| DNA repair protein RecO [Xylella fastidiosa M12] gi|238687924|sp|B0U3E0|RECO_XYLFM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71164196|gb|EAO13910.1| Recombination protein O, RecO [Xylella fastidiosa Dixon] gi|71728555|gb|EAO30710.1| Recombination protein O, RecO [Xylella fastidiosa Ann-1] gi|167965359|gb|ACA12369.1| DNA repair protein RecO [Xylella fastidiosa M12] Length = 243 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 7/161 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVNWRS 60 + A +L VR + E ++++EV+T+ YGR R Q + ++ LQ +R + Sbjct: 5 HEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRFSAIQ 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R LG+ R + A L L L R +P P ELY + Sbjct: 65 RGE--LGQLR-QAEALDTAPRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQTRER 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + + E +L+ +G G +L C G D Sbjct: 122 LRTNDSLAWSLRLFERDILETLGVGFNLE-CDANGTPLDPA 161 >gi|317472457|ref|ZP_07931780.1| DNA repair protein RecO [Anaerostipes sp. 3_2_56FAA] gi|316900075|gb|EFV22066.1| DNA repair protein RecO [Anaerostipes sp. 3_2_56FAA] Length = 246 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 16/186 (8%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN-W 58 + ++L + GE + + ++T++ GR F R + Q + + Sbjct: 4 EIKVTGLVLNAGNIGEFDKRVTLLTKERGRITAFARGAKKATSPYAAACQPLTFGEFSLY 63 Query: 59 RSRLAQNL-----GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R + NL G + FE ++ L YG E E+ + Sbjct: 64 EGRSSFNLMWADVGHY-FEGVKE------DLLLVSYGSYFCEFASYLTRENNDEKEILKL 116 Query: 114 LNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + L + ++ K+ + E+ L+ G G+++ C G T+DL + SGG +C Sbjct: 117 LYLSLRALEKKTIDPKLIRRVYEIKLMALYGQGMEVFCCTQCGSTEDLSYFDSGSGGILC 176 Query: 173 RSVGLP 178 + Sbjct: 177 SNCTKS 182 >gi|332981251|ref|YP_004462692.1| DNA repair protein RecO [Mahella australiensis 50-1 BON] gi|332698929|gb|AEE95870.1| DNA repair protein RecO [Mahella australiensis 50-1 BON] Length = 244 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 70/180 (38%), Gaps = 9/180 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L Y E + IL + +++ G+ + + + + ++ + V ++ L Sbjct: 5 KTEAIVLKHMDYLEADRILVLFSKELGKIHAIAKGSRRPKSRFLMASEIFVLADYM--LY 62 Query: 64 QNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + EV + + + Y + + + EP ++ Y +L L Sbjct: 63 EGKNLYTVTQSEVKCTFFELRQNMNNLAYAAYATNLCDAVIQDAEPNIKAYYLLLKTLQF 122 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRSVG 176 P+ + + + L+ IG+ L +C G L+ SP +GG +C Sbjct: 123 LSEPNTDASSLALIFAIKLMDFIGYRPLLDQCCDCGSDNINGSTLYFSPMAGGRLCSDCA 182 >gi|319892623|ref|YP_004149498.1| DNA recombination and repair protein RecO [Staphylococcus pseudintermedius HKU10-03] gi|317162319|gb|ADV05862.1| DNA recombination and repair protein RecO [Staphylococcus pseudintermedius HKU10-03] Length = 256 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 16/197 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG-RHLGFVRNGQSHR--MQPILQA---GNLV 54 M + II+ YGE + I+ ++ ++G + VR + + +Q Q G + Sbjct: 1 MLVKQKGIIIKAVDYGESDKIITIL-NEHGAKVPLMVRRAKKIKSGLQATTQIFVQGLFI 59 Query: 55 RVNWRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 W+ +G +VL + Y + + R + E +Y + Sbjct: 60 YNQWKG-----MGTLTSVDVLNLNYELRQDIYAHSYASLCLETIDRAMETDEINPTMYRL 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAV 171 L+ + + I + L + GF +DL+KCV+TG T L S K G + Sbjct: 115 LDFAFDRFQQGVSPQLIANIVMLKCMPRFGFDVDLSKCVMTGETNPAKLTHFSFKFDGII 174 Query: 172 CRSVGLPYAEKMLVLPS 188 V + L + Sbjct: 175 ATEVTHRDPHAL-PLSN 190 >gi|220928033|ref|YP_002504942.1| DNA repair protein RecO [Clostridium cellulolyticum H10] gi|219998361|gb|ACL74962.1| DNA repair protein RecO [Clostridium cellulolyticum H10] Length = 250 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 76/189 (40%), Gaps = 11/189 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-----WRSR 61 +++ + GE + I+ V+T + G+ +N R + L AG+ + ++ + Sbjct: 8 GLVIKEINTGEADKIITVLTAEEGKISIAAKNA--RRAKSSLGAGSQLFAYSDYMLFKGK 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 N+ +V+E + +Y + + + E EP E+ +L L Sbjct: 66 ELYNMSS--CQVIEPNYEIRNDIEKLIYCSHILELILDNVQEGEPSEEILQLLLNTLYVI 123 Query: 122 KIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQD-LLWVSPKSGGAVCRSVGLPY 179 + + + EL L+ +G+ + CV G QD ++ S G +C+ P Sbjct: 124 SKTNRPLNLVTRVFELRLMSLLGYEPHVISCVNCGKAQDENMYFDFDSSGLICKKCLNPR 183 Query: 180 AEKMLVLPS 188 + L+LP Sbjct: 184 SRSFLLLPG 192 >gi|119944414|ref|YP_942094.1| DNA repair protein RecO [Psychromonas ingrahamii 37] gi|166221907|sp|A1SSN0|RECO_PSYIN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119863018|gb|ABM02495.1| DNA replication and repair protein RecO [Psychromonas ingrahamii 37] Length = 233 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 5/152 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQ 64 A IL R Y E + ++++ + G+ + G+S + Q L++V++ R Sbjct: 8 AFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVSYFGR--G 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +L + ++ L+ LFL + L+R L C L++ L Sbjct: 66 SLKTVKSFEAQTQVVPLVGQRLFLA-MYINELLYRLLQAETACDGLFECYQQTLLAIAGA 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 EL L++ +G+G++ ++ + +G Sbjct: 125 VDPQIALRLFELTLIETLGYGVNFSEDIYSGE 156 >gi|300114890|ref|YP_003761465.1| DNA repair protein RecO [Nitrosococcus watsonii C-113] gi|299540827|gb|ADJ29144.1| DNA repair protein RecO [Nitrosococcus watsonii C-113] Length = 258 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 5/151 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRSRLA 63 A IL R Y E ++++E T +YGR + + R + LQ + ++W R Sbjct: 7 PAYILHSRPYRETSVLVEAFTPEYGRVGLVAKGVKRRRSHGVSPLQPFCPLLLSWTGRGD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L L + L R LP R+P +L+ L + Sbjct: 67 --LVTLTGAEATGPAFTLTGEGL-ICAFYLNELLLRLLPRRDPLEDLFSAYAHSLPSLRH 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + E LL +G+GL L V + Sbjct: 124 ARQRQQTLRLFERDLLACLGYGLILDHEVNS 154 >gi|242242838|ref|ZP_04797283.1| recombination protein RecO [Staphylococcus epidermidis W23144] gi|242233739|gb|EES36051.1| recombination protein RecO [Staphylococcus epidermidis W23144] Length = 253 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 17/185 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M + II+ YGE + I+ ++ + R ++ +++ QA + V Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMAR--RAKKVKSGFQANTQLFVYGLF 58 Query: 58 ----WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 WR +G +V+ H L Y + R + E E YD Sbjct: 59 IYNKWRG-----MGTLNSVDVINQHYELQLDLFESSYASLCAETIDRSMEENEVSKYNYD 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGA 170 +L L+ + + V + L + GF C +TG+ L+ S K GA Sbjct: 114 LLQFVLSKINEGTPAQLMSVIVLLKSMSKFGFTASFDHCAITGIQDQSKLIAYSFKYDGA 173 Query: 171 VCRSV 175 + S Sbjct: 174 ISESA 178 >gi|254448819|ref|ZP_05062275.1| DNA repair protein RecO [gamma proteobacterium HTCC5015] gi|198261509|gb|EDY85798.1| DNA repair protein RecO [gamma proteobacterium HTCC5015] Length = 206 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 8/132 (6%) Query: 23 EVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLL 82 E+++R G+ ++ R L+ NL+ + R R L R E + A Sbjct: 2 ELLSRSAGKVSAVAPGARNRRKNFSLEPFNLLDIACRGR-GSLLTLSRAEPFGQYWAL-- 58 Query: 83 SSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG---KIFVQIELML 138 + LY GL + L FL E + EL+D +I L+ K + G + + EL L Sbjct: 59 -AGESLYCGLYANELLSYFLAEGDAQPELFDRYSILLSDLKGATERGDRERCLREFELDL 117 Query: 139 LKNIGFGLDLTK 150 L +GF +D ++ Sbjct: 118 LWLLGFSIDFSQ 129 >gi|319779262|ref|YP_004130175.1| DNA recombination and repair protein RecO [Taylorella equigenitalis MCE9] gi|317109286|gb|ADU92032.1| DNA recombination and repair protein RecO [Taylorella equigenitalis MCE9] Length = 205 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 18/152 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPI---LQAGNLVRVNW 58 + A +L S+ + ++I+ V +R+YG G ++ + ++PI Q + V+W Sbjct: 10 EAKAFVLHSISWSDNSLIVNVFSREYGLIAGVAKSAKRPYSVLRPINAHFQP---LLVSW 66 Query: 59 RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN-I 116 GE +E+ + + + R + + +P +L+D Sbjct: 67 SGS-----GELKTITKVETDGFYCIPERALMSAWYLNELILRGVAKEDPHEKLFDCYEDA 121 Query: 117 FLNCHKIPSVIGKIFV-QIELMLLKNIGFGLD 147 L +I + + E L IG+GLD Sbjct: 122 LLGLVSDTD--PRIVLRRFEWQWLCEIGYGLD 151 >gi|167739549|ref|ZP_02412323.1| DNA repair protein RecO [Burkholderia pseudomallei 14] Length = 207 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 19/150 (12%) Query: 29 YGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSL 86 +GR + + ++ +LQ + ++W + E+ A+ + L Sbjct: 1 HGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKS---------ELRTLTGAEWVGGML 51 Query: 87 FLYGLQSIVP------LFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLK 140 L G + L +F +P L+ + L ++ E +LL+ Sbjct: 52 PLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAHGEPPVQVLRSFERVLLR 111 Query: 141 NIGFGLDLTKCVVTGVTQ-DLLWV-SPKSG 168 G+ + L + V + D L+V P+ G Sbjct: 112 ETGYAMTLKRTVARRAVEPDKLYVFDPQRG 141 >gi|293376341|ref|ZP_06622578.1| DNA repair protein RecO [Turicibacter sanguinis PC909] gi|325843400|ref|ZP_08167958.1| DNA repair protein RecO [Turicibacter sp. HGF1] gi|292645030|gb|EFF63103.1| DNA repair protein RecO [Turicibacter sanguinis PC909] gi|325489322|gb|EGC91696.1| DNA repair protein RecO [Turicibacter sp. HGF1] Length = 247 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 29/192 (15%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA-----GNL 53 M D IIL +YGE + I++V+TR G FV+N + ++Q NL Sbjct: 1 MALDVDGIILKNFNYGEHHKIIKVLTRNMGVIGVFVQNANKVNTKKSALVQPLTSARFNL 60 Query: 54 ---------VRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER 104 + + + + + + + L L G+ S Sbjct: 61 KPSTNANSELYYLYSGEVENHYLNIKLDYETVAYFYFMIE-LILKGVSS----------- 108 Query: 105 EPCLE-LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + +Y +L FL+ + + + ++ +G L C T+ ++ + Sbjct: 109 DEYSAYIYRLLKNFLDAADAGYNPYLLSLIFQFKMMPVLGIEPVLDCCANCRSTEQIVTI 168 Query: 164 SPKSGGAVCRSV 175 + GG VC Sbjct: 169 GIRQGGLVCAKC 180 >gi|163791427|ref|ZP_02185836.1| DNA repair protein RecO, putative [Carnobacterium sp. AT7] gi|159873291|gb|EDP67386.1| DNA repair protein RecO, putative [Carnobacterium sp. AT7] Length = 270 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 68/177 (38%), Gaps = 14/177 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAG--NLVRVNWRSR 61 + I+L VR++ E + ++++ T ++G+ + FV+ + + ++ + + R Sbjct: 8 EGIVLSVRNHRENDQLVKLFTSRFGKRMFFVKGTRKQKNKLKTAVLPFTKATYIADIR-- 65 Query: 62 LAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 L R + +S + ++ Y L L + L+ ++ Sbjct: 66 -DTGLCFIRDAKEVDQYKSMQTDIFLNAYATYILNLA---DAALDDGIVDGALFHKIDRC 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + + E+ +L G +L C V G T+ S GG +C+S Sbjct: 122 LTEIDEETDPEIVVNIFEVQILPYFGVSPELRGCRVCGETEGPFDYSGSYGGLLCQS 178 >gi|310287054|ref|YP_003938312.1| DNA repair protein RecO [Bifidobacterium bifidum S17] gi|309250990|gb|ADO52738.1| DNA repair protein RecO [Bifidobacterium bifidum S17] Length = 260 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 76/213 (35%), Gaps = 35/213 (16%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTAKLGEADRIVTLLTRSHGKIRAVAKGVRRVKSRFGGRLEPFMRVDVLIAT 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIF 117 R + E + ++ A + + +V L E E + Y +L Sbjct: 64 GRTLD--VVSQAESISAYAAPICADYGAYGIANVMVETADKLVSAEGERAVAQYRLLVGG 121 Query: 118 LNCH----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG------------------ 155 LN + IG+ +V L L G+ L CVV G Sbjct: 122 LNALARHAHPATAIGESYV---LRALALAGWTPRLHSCVVCGRHVAVSPVAGESGDDGGA 178 Query: 156 ---VTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++ SP +GG +C P A+++ Sbjct: 179 GESRMSGPMFFSPSAGGLMCSIDRTPDAKRIDP 211 >gi|227548796|ref|ZP_03978845.1| DNA repair protein RecO [Corynebacterium lipophiloflavum DSM 44291] gi|227079126|gb|EEI17089.1| DNA repair protein RecO [Corynebacterium lipophiloflavum DSM 44291] Length = 241 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 ++D A ++ +GE + ++ ++TR +G + + R + +Q + V + Sbjct: 7 YRDRAFVVRTYDFGEADRVVVLLTRHHGLVRSVAKGVRKSRSRFGSRIQPFVDIDVQLYP 66 Query: 60 SRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFL----PEREPCLELYDML 114 R NL + + +++ +I+ L ER L+D Sbjct: 67 GR---NLATITAADTVAYFAGRIIEDFDRYAAGCAILEAAEKLSYSDAER--GSSLFDAT 121 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + P + + L ++ G+G+ L C S +GGAVC Sbjct: 122 RDALEQLQSPEQHPTLVLDAFILRATEHAGWGVSLFHCANCQAPGPHKAFSAPTGGAVCN 181 Query: 174 SVGLP 178 + P Sbjct: 182 NCRPP 186 >gi|269127439|ref|YP_003300809.1| DNA repair protein RecO [Thermomonospora curvata DSM 43183] gi|268312397|gb|ACY98771.1| DNA repair protein RecO [Thermomonospora curvata DSM 43183] Length = 270 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 12/184 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ I+L + GE + I+ V+TR+ GR + + R + L+ V + + Sbjct: 10 YRDEGIVLRTQKLGEADRIVTVLTRRSGRIRAAAKGVRRTRSKFGARLEPFTHVDLQFYE 69 Query: 61 RLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPER-EP----CLELYDML 114 R + +L + E L + L++ + G+ + + E EP L L L Sbjct: 70 RRSLDLIT-QAETLRPYGEPLVTDYPRYTAGVAMLETAEKLTAEEKEPALRQFLLLLGGL 128 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 ++ P ++ ++ L L G+ L +C G L + +GGA+C + Sbjct: 129 RTLVDRSHDPRLVLDAYL---LRSLSVAGWAPALDECARCGSRGRLRVFAIAAGGALCGA 185 Query: 175 VGLP 178 P Sbjct: 186 CRQP 189 >gi|225075848|ref|ZP_03719047.1| hypothetical protein NEIFLAOT_00864 [Neisseria flavescens NRL30031/H210] gi|224952794|gb|EEG34003.1| hypothetical protein NEIFLAOT_00864 [Neisseria flavescens NRL30031/H210] Length = 247 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +L + + ++ +E +R+YGR R+ + + ++ +L V +W Sbjct: 9 HEPIFLLASAPWRDSSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASW--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSS------SLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 E+ H A+ + GL + + +P ELYD+L Sbjct: 66 ------YGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLA 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + + E LL +GF DL Sbjct: 120 ETMKTICCEANHIAALRRFEWSLLTRLGFAPDL 152 >gi|322390548|ref|ZP_08064065.1| recombination protein O [Streptococcus parasanguinis ATCC 903] gi|321142744|gb|EFX38205.1| recombination protein O [Streptococcus parasanguinis ATCC 903] Length = 259 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 10/156 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL-AQN 65 I+L R + E + ++++ T + G+ + FV++ R+ P+LQ LV + ++ Sbjct: 9 GIVLYNRDFREDDKLVKIFTEKSGKRMFFVKHAGKSRLNPMLQP--LVTADMLLKINDDG 66 Query: 66 LGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L +V + A L + S Y L + + + L+ L L+ Sbjct: 67 LSYIDDFQDVQVYKKINADLFALSYATYVLALA---DASIQDNQVDPALFAFLEKTLSLM 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + E+ LL G L+L +C Sbjct: 124 EEGLDYEVLTNIFEIQLLSRFGVVLNLHECCFCHRV 159 >gi|328957482|ref|YP_004374868.1| DNA repair protein RecO [Carnobacterium sp. 17-4] gi|328673806|gb|AEB29852.1| DNA repair protein RecO [Carnobacterium sp. 17-4] Length = 269 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 14/185 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAG--NLVRVNWRSR 61 + I+L VR++ E + ++++ T ++G+ + FV+ + +++ + + R Sbjct: 8 EGIVLSVRNHRENDQLVKLFTNRFGKRMFFVKGTRKQKNKLRTAVLPFTKATYIADIR-- 65 Query: 62 LAQNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 L R + +S + ++ Y L L + L+ ++ Sbjct: 66 -DTGLCFIRDAKEVDQYKSMQTDIFLNAYATYILNLA---DAALDDGIVDSTLFHKIDRC 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + + E+ +L G +L C V G T+ S GG +C++ Sbjct: 122 LTEIDEETDPEIVVNIFEIQILPYFGVSPELRGCRVCGNTEGPFDYSGSYGGLLCQNHWH 181 Query: 178 PYAEK 182 + Sbjct: 182 LDRHR 186 >gi|256832763|ref|YP_003161490.1| DNA repair protein RecO [Jonesia denitrificans DSM 20603] gi|256686294|gb|ACV09187.1| DNA repair protein RecO [Jonesia denitrificans DSM 20603] Length = 251 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 8/182 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR- 59 ++DDA++L + GE + I+ ++TR++G+ + + R L+ + V Sbjct: 4 YRDDAVVLRAQKLGEADRIITLLTREHGKVRAVGKGVRRTGSRFGARLEPFMHIDVQLNE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIF 117 R + + + ++ + + + + R + EREP ++ + +L Sbjct: 64 GRTFD--VVTQVDTIGAYARDICIDYGRYTVAGALVETADRLVVAEREPSVQQFWLLAGA 121 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L V + + L G+ C G S +GGAVC Sbjct: 122 LRTLASQQVPADLILDSYLLRAFAVAGYAPSFDVCAQCGAPGPHTAFSVAAGGAVCARCR 181 Query: 177 LP 178 P Sbjct: 182 PP 183 >gi|220932085|ref|YP_002508993.1| DNA repair protein RecO [Halothermothrix orenii H 168] gi|219993395|gb|ACL69998.1| DNA repair protein RecO [Halothermothrix orenii H 168] Length = 258 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 15/189 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN-WRSRL 62 + I+L GE + I+ +TR G+ + + R + ++ + V +R R Sbjct: 7 EGIVLKQFDLGEADKIITFITRDMGKLRAVAKGVRKTRSSISGLVLPFSYAEVTIYRGRS 66 Query: 63 AQNLGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDML----NIF 117 + + + + L Y + + E + L+ +L + Sbjct: 67 LDKINRIKV---KYSFSPLREDLTRMAYASYMAEFIEKVSVEDDNNRALFSLLLSSFHRL 123 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD---LLWVSPKSGGAVCRS 174 L +I I + ++ +L +G +L+ CV G + + S + GG +C + Sbjct: 124 LKAEEISEYN-HIILAFKIRILVILGIKPELSSCVDCGQQNNPGSINIFSIERGGLLCHN 182 Query: 175 VGLPYAEKM 183 + + M Sbjct: 183 CSSNHMDGM 191 >gi|90407381|ref|ZP_01215566.1| DNA repair protein RecO [Psychromonas sp. CNPT3] gi|90311532|gb|EAS39632.1| DNA repair protein RecO [Psychromonas sp. CNPT3] Length = 240 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 8/149 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQ 64 A IL R Y E +++L++ + G+ + G+S + Q L++ + R + Sbjct: 8 AFILHRRPYRETSLLLDLFCQDIGKVSLIYKGGRSSTRLRRGCAQPFTLLQATYFGRSS- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 L + ++ L+ L+ + L+R L C L+ L Sbjct: 67 -LKTVKSIEAKTQVVPLVGERLY-MAMYVNELLYRLLQAETACDGLFSCYQDTLLALAGA 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 K EL LL+++G+G++ T+ Sbjct: 125 KDNQHAQIALRNFELTLLESLGYGVNFTQ 153 >gi|302389488|ref|YP_003825309.1| DNA repair protein RecO [Thermosediminibacter oceani DSM 16646] gi|302200116|gb|ADL07686.1| DNA repair protein RecO [Thermosediminibacter oceani DSM 16646] Length = 251 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 27/246 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR--- 59 + +A+++G R GE + IL + + + G+ R R + L AG + ++ Sbjct: 4 YTTEAVVVGYRDLGEADRILTLFSPERGKIHAVARGV--RRPRSPLMAGTQL-FSYSKFL 60 Query: 60 ---SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R ++ + E+ ES YG L E E EL+ Sbjct: 61 LVEGRNLDSIS--QCELKESFFRIREDLDRMAYGSYFAELLRISTRESEKSEELFRFFMK 118 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL--LWVSPKSGGAVCRS 174 L ++ + + EL L+ G+ L+ CV +L + S GG +C Sbjct: 119 VLYLLQVWEDLEFMARIFELKLMALQGYTPQLSHCVNC-RNDELKEIRFSHALGGILCEK 177 Query: 175 VGLPYAEK-------MLVLPSFLWKEEQTIDADSLKSAFQ------LTDYFLNKYALQHN 221 + ++++ L + + + ++ + LT + L+ + Sbjct: 178 CRGSDEKSVVISRAVLMMMRRMLKGKFEDLAKLKVEDGVKEELKAVLTGFVLHHMERKPR 237 Query: 222 IIHCHL 227 + Sbjct: 238 TLRFLD 243 >gi|116510881|ref|YP_808097.1| DNA repair protein RecO [Lactococcus lactis subsp. cremoris SK11] gi|122940431|sp|Q033E7|RECO_LACLS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116106535|gb|ABJ71675.1| DNA replication and repair protein RecO [Lactococcus lactis subsp. cremoris SK11] Length = 251 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 14/174 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L R+Y EK+ ++++ T +G+ + FV+N LQ + + Sbjct: 7 QGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSSYASSLQ--AFTDGKLTATIND- 63 Query: 66 LGEFRF-----EVL--ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 G F F EV+ ++ A + ++ Y + + + LY L L Sbjct: 64 -GGFSFIEDVSEVVVYKNISADIFINAHASYIISLADAAIS---DNQYDPALYGFLKRSL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + EL +L G L+ ++C T S K G +C Sbjct: 120 ELLDQGFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVGPFDFSYKFSGCLC 173 >gi|119774019|ref|YP_926759.1| DNA repair protein RecO [Shewanella amazonensis SB2B] gi|119766519|gb|ABL99089.1| DNA repair protein RecO [Shewanella amazonensis SB2B] Length = 224 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 9/148 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLA 63 + +L R Y E + I+ ++ GR R G R + +LQ + + + Sbjct: 2 ERGYLLHSRPYRENSAIVNLLVDGAGRVDAIARLGSGKRSSRALLQPFQPLLFSLSGK-- 59 Query: 64 QNLGEFR--FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 GE R + A L + L R L L+ + L Sbjct: 60 ---GELRTLIQPEAYAPAIPLQGDALYAAMYLNELLMRCLSHSHAGEGLFFSYHQTLMSM 116 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLT 149 EL LL+ +G L+ Sbjct: 117 -AKGFCQSQLRYFELSLLEELGACPSLS 143 >gi|148380896|ref|YP_001255437.1| DNA repair protein RecO [Clostridium botulinum A str. ATCC 3502] gi|148290380|emb|CAL84507.1| DNA repair protein [Clostridium botulinum A str. ATCC 3502] Length = 247 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 11/177 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQA---GNLVRVN 57 ++ A+++ + + E + ++ + T + G+ + + +R + + G V Sbjct: 4 YKTRAVVIKTQEFKEADKLVWLYTEKLGKITAIAKGAKKNRSKYLSNTSPFCYGEYVL-- 61 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++ + NL E ++++S L YG + E+E EL+ L Sbjct: 62 YKGKSLFNLSE--VQLIDSFQDFLRDLDTLTYGSYFCELIDICTEEKESSRELFQELVKS 119 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVC 172 L K V +I + E+ +LK G+ L+ CV G + ++S +S G +C Sbjct: 120 LFLMKNKVVDIEILARAFEMKVLKYTGYALNFNHCVECGRKIETSNYISLQSLGGIC 176 >gi|117928003|ref|YP_872554.1| DNA repair protein RecO [Acidothermus cellulolyticus 11B] gi|117648466|gb|ABK52568.1| DNA replication and repair protein RecO [Acidothermus cellulolyticus 11B] Length = 263 Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 8/182 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L + GE + I+ V+TR+ GR + + S + L+ N V V Sbjct: 24 YRDDAVVLRTQKLGEADRIITVLTRRNGRVRAVAKGIRRTSSKFGARLEPANHVDVQLY- 82 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLNIFLN 119 L ++L + L Y L +++ L E + L + Sbjct: 83 -LGRSLDIVTQAEIRDPFGDRLRHDYESYTLGTAMLETAEKLTAEEREPAIRLYLLLLGA 141 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + +L+ + G+ L C G W S +GG VC Sbjct: 142 LRALTEQRHDARLIFDAFVLRALATSGYQPALDDCARCGAQGPHRWFSVPAGGLVCGDCR 201 Query: 177 LP 178 P Sbjct: 202 PP 203 >gi|330889506|gb|EGH22167.1| DNA repair protein RecO [Pseudomonas syringae pv. mori str. 301020] Length = 227 Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R+ + + + + V +R R + Sbjct: 8 PAYVLHSRAYRENSALVDFLTPQ-GRLRAVLRSAKGKAGS-LARPFVPLEVEFRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G R E + A ++ G+ L R L +P +++ L + Sbjct: 66 NVG--RME--SAGVATWMTGEALFSGMYLNELLIRLLSAEDPHPAVFEHYAATLLALALG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL ++G+G + Sbjct: 122 RPLEPLLRSFEWRLLDDLGYGFAMDA 147 >gi|269794674|ref|YP_003314129.1| DNA replication and repair protein RecO [Sanguibacter keddieii DSM 10542] gi|269096859|gb|ACZ21295.1| DNA replication and repair protein RecO [Sanguibacter keddieii DSM 10542] Length = 281 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + I+ +TR++G+ + + S R L+ V V Sbjct: 8 YRDEALVLRTHKLGEADRIITFLTREHGKVRAVAKGVRRTSSRFGARLEPFMFVDVQLH- 66 Query: 61 RLAQNLGEFR-FEVLESHCAKLLSSS-LFLYGLQSIVPLFRFL-PEREPCLELY----DM 113 + +NL E+++ + + S L+ G + R + EREP ++ + Sbjct: 67 -VGRNLDIVTQAEMVQPYARAIFSDYTLYTAGAVMLETADRLVEAEREPSVQQFWLLAGA 125 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + P ++ ++ L L G+ C G S GG VC Sbjct: 126 LRALADHAHAPGLVLDSYL---LRALAVAGWAPTFADCARCGEPGPHRAFSVAQGGTVCP 182 Query: 174 SVGLP 178 P Sbjct: 183 RCRPP 187 >gi|38234284|ref|NP_940051.1| DNA repair protein RecO [Corynebacterium diphtheriae NCTC 13129] gi|38200547|emb|CAE50242.1| Putative DNA-repair related protein [Corynebacterium diphtheriae] Length = 242 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 6/173 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 +++ A+++ +GE + I+ + TR G G + + + + LQ + V +R Sbjct: 6 YRERALVVRSYDFGEADRIIVLFTRGRGIVRGVAKGVRRAKSRFGSRLQPFVELDVQLYR 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R +++ + + AK++ SI+ L + L+D+ L Sbjct: 66 GRNLESI--TAADTVAYFGAKIIDDVTRFSAASSILEGVEKLAVGDE-PRLFDLTVTALK 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + L + G+ L C G + P GGAVC Sbjct: 123 NMQSCAHPVAEVDTFLLQGMNIAGWAPSLFDCAQCGASGPHHAFHPSPGGAVC 175 >gi|320095930|ref|ZP_08027551.1| DNA repair protein RecO [Actinomyces sp. oral taxon 178 str. F0338] gi|319977139|gb|EFW08861.1| DNA repair protein RecO [Actinomyces sp. oral taxon 178 str. F0338] Length = 207 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 8/182 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D+AI+L GE + I+ ++T ++G+ + + S + L+ ++V V R Sbjct: 5 YRDEAIVLRTHKLGEADRIITLLTAEHGQVRAVAKGVRRTSSKFGARLEPFSVVDVQAHR 64 Query: 60 SRLAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREP--CLELYDMLNI 116 R + + E L H A L++ G + R + + + +L Sbjct: 65 GRSLDTI--TQVESLALHGDAIAADYDLYVAGTVIVEAAERLTADSDAAGHSQYLLLLGA 122 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 K I L L G+ C G S GGAVC + Sbjct: 123 LHALAKRRHDPTLIRTSYLLRALALAGWAPSCYDCANCGAAGPHSAFSIAEGGAVCAACR 182 Query: 177 LP 178 P Sbjct: 183 PP 184 >gi|257082013|ref|ZP_05576374.1| recombination protein O [Enterococcus faecalis E1Sol] gi|257084564|ref|ZP_05578925.1| recombination protein O [Enterococcus faecalis Fly1] gi|257087440|ref|ZP_05581801.1| recombination protein O [Enterococcus faecalis D6] gi|256990043|gb|EEU77345.1| recombination protein O [Enterococcus faecalis E1Sol] gi|256992594|gb|EEU79896.1| recombination protein O [Enterococcus faecalis Fly1] gi|256995470|gb|EEU82772.1| recombination protein O [Enterococcus faecalis D6] gi|315025404|gb|EFT37336.1| DNA repair protein RecO [Enterococcus faecalis TX2137] gi|315161674|gb|EFU05691.1| DNA repair protein RecO [Enterococcus faecalis TX0645] gi|315173672|gb|EFU17689.1| DNA repair protein RecO [Enterococcus faecalis TX1346] Length = 264 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+L R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLLPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|256961297|ref|ZP_05565468.1| recombination protein O [Enterococcus faecalis Merz96] gi|293383581|ref|ZP_06629491.1| DNA repair protein RecO [Enterococcus faecalis R712] gi|293387306|ref|ZP_06631862.1| DNA repair protein RecO [Enterococcus faecalis S613] gi|312906131|ref|ZP_07765143.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 512] gi|312909477|ref|ZP_07768332.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 516] gi|256951793|gb|EEU68425.1| recombination protein O [Enterococcus faecalis Merz96] gi|291079093|gb|EFE16457.1| DNA repair protein RecO [Enterococcus faecalis R712] gi|291083204|gb|EFE20167.1| DNA repair protein RecO [Enterococcus faecalis S613] gi|310627777|gb|EFQ11060.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 512] gi|311290150|gb|EFQ68706.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 516] Length = 264 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+L R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLLPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|256617034|ref|ZP_05473880.1| recombination protein O [Enterococcus faecalis ATCC 4200] gi|256853770|ref|ZP_05559135.1| DNA repair protein recO [Enterococcus faecalis T8] gi|307277157|ref|ZP_07558261.1| DNA repair protein RecO [Enterococcus faecalis TX2134] gi|307290539|ref|ZP_07570451.1| DNA repair protein RecO [Enterococcus faecalis TX0411] gi|256596561|gb|EEU15737.1| recombination protein O [Enterococcus faecalis ATCC 4200] gi|256710713|gb|EEU25756.1| DNA repair protein recO [Enterococcus faecalis T8] gi|295113463|emb|CBL32100.1| DNA repair protein RecO [Enterococcus sp. 7L76] gi|306498394|gb|EFM67899.1| DNA repair protein RecO [Enterococcus faecalis TX0411] gi|306506087|gb|EFM75253.1| DNA repair protein RecO [Enterococcus faecalis TX2134] gi|315030212|gb|EFT42144.1| DNA repair protein RecO [Enterococcus faecalis TX4000] Length = 261 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+L R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLLPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|229545170|ref|ZP_04433895.1| recombination protein O [Enterococcus faecalis TX1322] gi|229549419|ref|ZP_04438144.1| recombination protein O [Enterococcus faecalis ATCC 29200] gi|255972123|ref|ZP_05422709.1| recombination protein O [Enterococcus faecalis T1] gi|256963576|ref|ZP_05567747.1| recombination protein O [Enterococcus faecalis HIP11704] gi|257079641|ref|ZP_05574002.1| recombination protein O [Enterococcus faecalis JH1] gi|257090599|ref|ZP_05584960.1| recombination protein recO [Enterococcus faecalis CH188] gi|257416647|ref|ZP_05593641.1| recombination protein O [Enterococcus faecalis AR01/DG] gi|257421949|ref|ZP_05598939.1| DNA repair protein recO [Enterococcus faecalis X98] gi|294780921|ref|ZP_06746275.1| DNA repair protein RecO [Enterococcus faecalis PC1.1] gi|307270834|ref|ZP_07552122.1| DNA repair protein RecO [Enterococcus faecalis TX4248] gi|307271515|ref|ZP_07552787.1| DNA repair protein RecO [Enterococcus faecalis TX0855] gi|312899838|ref|ZP_07759157.1| DNA repair protein RecO [Enterococcus faecalis TX0470] gi|312905131|ref|ZP_07764252.1| DNA repair protein RecO [Enterococcus faecalis TX0635] gi|312953488|ref|ZP_07772328.1| DNA repair protein RecO [Enterococcus faecalis TX0102] gi|229305656|gb|EEN71652.1| recombination protein O [Enterococcus faecalis ATCC 29200] gi|229309715|gb|EEN75702.1| recombination protein O [Enterococcus faecalis TX1322] gi|255963141|gb|EET95617.1| recombination protein O [Enterococcus faecalis T1] gi|256954072|gb|EEU70704.1| recombination protein O [Enterococcus faecalis HIP11704] gi|256987671|gb|EEU74973.1| recombination protein O [Enterococcus faecalis JH1] gi|256999411|gb|EEU85931.1| recombination protein recO [Enterococcus faecalis CH188] gi|257158475|gb|EEU88435.1| recombination protein O [Enterococcus faecalis ARO1/DG] gi|257163773|gb|EEU93733.1| DNA repair protein recO [Enterococcus faecalis X98] gi|294452047|gb|EFG20495.1| DNA repair protein RecO [Enterococcus faecalis PC1.1] gi|306511787|gb|EFM80785.1| DNA repair protein RecO [Enterococcus faecalis TX0855] gi|306512835|gb|EFM81479.1| DNA repair protein RecO [Enterococcus faecalis TX4248] gi|310628697|gb|EFQ11980.1| DNA repair protein RecO [Enterococcus faecalis TX0102] gi|310631521|gb|EFQ14804.1| DNA repair protein RecO [Enterococcus faecalis TX0635] gi|311293088|gb|EFQ71644.1| DNA repair protein RecO [Enterococcus faecalis TX0470] gi|315152155|gb|EFT96171.1| DNA repair protein RecO [Enterococcus faecalis TX0031] gi|315155342|gb|EFT99358.1| DNA repair protein RecO [Enterococcus faecalis TX0043] gi|315159082|gb|EFU03099.1| DNA repair protein RecO [Enterococcus faecalis TX0312] gi|315579041|gb|EFU91232.1| DNA repair protein RecO [Enterococcus faecalis TX0630] gi|323481398|gb|ADX80837.1| DNA repair protein RecO [Enterococcus faecalis 62] gi|329572236|gb|EGG53896.1| DNA repair protein RecO [Enterococcus faecalis TX1467] Length = 262 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+L R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLLPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|29376904|ref|NP_816058.1| DNA repair protein RecO, putative [Enterococcus faecalis V583] gi|227553940|ref|ZP_03983987.1| recombination protein O [Enterococcus faecalis HH22] gi|255975190|ref|ZP_05425776.1| recombination protein O [Enterococcus faecalis T2] gi|256763102|ref|ZP_05503682.1| recombination protein O [Enterococcus faecalis T3] gi|256956686|ref|ZP_05560857.1| recombination protein O [Enterococcus faecalis DS5] gi|300861009|ref|ZP_07107096.1| DNA repair protein RecO [Enterococcus faecalis TUSoD Ef11] gi|307285809|ref|ZP_07565943.1| DNA repair protein RecO [Enterococcus faecalis TX0860] gi|42559464|sp|Q831U0|RECO_ENTFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|29344369|gb|AAO82128.1| DNA repair protein RecO, putative [Enterococcus faecalis V583] gi|227176926|gb|EEI57898.1| recombination protein O [Enterococcus faecalis HH22] gi|255968062|gb|EET98684.1| recombination protein O [Enterococcus faecalis T2] gi|256684353|gb|EEU24048.1| recombination protein O [Enterococcus faecalis T3] gi|256947182|gb|EEU63814.1| recombination protein O [Enterococcus faecalis DS5] gi|300850048|gb|EFK77798.1| DNA repair protein RecO [Enterococcus faecalis TUSoD Ef11] gi|306502570|gb|EFM71837.1| DNA repair protein RecO [Enterococcus faecalis TX0860] gi|315035614|gb|EFT47546.1| DNA repair protein RecO [Enterococcus faecalis TX0027] gi|315146684|gb|EFT90700.1| DNA repair protein RecO [Enterococcus faecalis TX4244] gi|315166397|gb|EFU10414.1| DNA repair protein RecO [Enterococcus faecalis TX1341] gi|315170293|gb|EFU14310.1| DNA repair protein RecO [Enterococcus faecalis TX1342] gi|315574359|gb|EFU86550.1| DNA repair protein RecO [Enterococcus faecalis TX0309B] gi|315580166|gb|EFU92357.1| DNA repair protein RecO [Enterococcus faecalis TX0309A] gi|327535694|gb|AEA94528.1| recombination protein O [Enterococcus faecalis OG1RF] Length = 262 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+L R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLLPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|229817202|ref|ZP_04447484.1| hypothetical protein BIFANG_02462 [Bifidobacterium angulatum DSM 20098] gi|229784991|gb|EEP21105.1| hypothetical protein BIFANG_02462 [Bifidobacterium angulatum DSM 20098] Length = 240 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 69/194 (35%), Gaps = 16/194 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 + D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YHDEGVVLRTAKLGEADRIITLLTRDHGKVRAVAKGVRRAKSRFGGRLEPFMRVDVLIAE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYD----M 113 R + + E + ++ + + I L E E Y Sbjct: 64 GRTLDTIS--QVESISAYAGPICADYDSYTAANVIAETADKLASAENERVTAQYRLLAGA 121 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 LN P +I +V + L G+ L C+V + + S GGA+C Sbjct: 122 LNALATHAHGPELISASYV---MRALSLAGWTPRLASCMVCDSRE-ITHFSVPDGGALCA 177 Query: 174 SVGLPYAEKMLVLP 187 + P + + LP Sbjct: 178 THHTP-RSEPIPLP 190 >gi|108804341|ref|YP_644278.1| DNA repair protein RecO [Rubrobacter xylanophilus DSM 9941] gi|122381777|sp|Q1AVW2|RECO_RUBXD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|108765584|gb|ABG04466.1| DNA repair protein RecO [Rubrobacter xylanophilus DSM 9941] Length = 248 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 68/194 (35%), Gaps = 13/194 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRV-NWR 59 ++ I+L YGE + IL++ TR G + + R + L+ + V +R Sbjct: 4 YRSRGIVLRSIRYGEADRILDIYTRDAGLVSCIAKGIRRTRSRFGARLEPFSCVDFMAYR 63 Query: 60 SRLAQNLGEFRFEVLESHCA--KLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNI 116 R + + E L S + L G+ ++ L P+R LY L+ Sbjct: 64 GRTLDTI--TQAESLRSFRGVRERLDRLQAAAGMAGVLHALSGGTPDRRTFNLLYRALDA 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRS 174 K G I L L G+ L C G V + +P +GG +CR Sbjct: 122 L---EKGEEGFGMIEASFGLKLAVLSGYAPRLDGCAECGGDVPGEGARFAPAAGGFLCRD 178 Query: 175 VGLPYAEKMLVLPS 188 +P Sbjct: 179 CRSDAPPDSFPVPP 192 >gi|312867000|ref|ZP_07727211.1| DNA repair protein RecO [Streptococcus parasanguinis F0405] gi|311097482|gb|EFQ55715.1| DNA repair protein RecO [Streptococcus parasanguinis F0405] Length = 259 Score = 62.5 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 10/156 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL-AQN 65 I+L R + E + ++++ T + G+ + FV++ R+ P+LQ LV + ++ Sbjct: 9 GIVLYNREFREDDKLVKIFTEKSGKRMFFVKHAGKSRLSPMLQP--LVTADMLLKINDDG 66 Query: 66 LGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L +V + A L + S Y L + + + L+ L L+ Sbjct: 67 LSYIDDFQDVQVYKKINADLFALSYATYVLALA---DASIQDNQVDPALFAFLEKTLSLM 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + E+ LL G L+L +C Sbjct: 124 EEGLDYEVLTNIFEIQLLSRFGVVLNLHECCFCHRV 159 >gi|169334056|ref|ZP_02861249.1| hypothetical protein ANASTE_00449 [Anaerofustis stercorihominis DSM 17244] gi|169258773|gb|EDS72739.1| hypothetical protein ANASTE_00449 [Anaerofustis stercorihominis DSM 17244] Length = 253 Score = 62.5 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 26/191 (13%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQ----------- 49 M + I+L + E + IL V T++ G+ +N S + + I Q Sbjct: 1 MIREFHGIVLKNIKFSENDRILTVFTKERGKISVMAKNAASKKSKVIAQTSTFSYSYFCL 60 Query: 50 -AGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL 108 G + ++ + ++ A +S + ++ + Sbjct: 61 YPGKNFYTLKSADYIKSFPGLQTDLERLSFASYISELVDIFYEDKMEE-----------P 109 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWV-SP 165 ++++ L+ + + F+ L LL G D + C + T D ++ Sbjct: 110 ITFNLIIYILDLLQKEKLEKLSFITLAFMLKLLGISGIIPDFSGCSICSATNDEYYILDF 169 Query: 166 KSGGAVCRSVG 176 SG +C Sbjct: 170 DSGSILCSKCT 180 >gi|293604016|ref|ZP_06686429.1| DNA repair protein RecO [Achromobacter piechaudii ATCC 43553] gi|292817620|gb|EFF76688.1| DNA repair protein RecO [Achromobacter piechaudii ATCC 43553] Length = 181 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 6/141 (4%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQNL 66 +L ++ E ++I++ +R +G + + ++P+L A + ++W + Sbjct: 1 MLHATAWRETSLIVQTFSRDHGCVAMVAKGAKRPYSVLRPVLSAFQPLLLSWTG-NGEVK 59 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 R E+ L+ + + L R LP + L+D ++ L + Sbjct: 60 TLTRAEIAGIRP---LTGTALMSAWYMNELLLRLLPREDAHPLLFDAYDMALQQLSNGTR 116 Query: 127 IGKIFVQIELMLLKNIGFGLD 147 + E LL+ G+G+D Sbjct: 117 AAGALRRFEWTLLRETGYGVD 137 >gi|284030386|ref|YP_003380317.1| DNA repair protein RecO [Kribbella flavida DSM 17836] gi|283809679|gb|ADB31518.1| DNA repair protein RecO [Kribbella flavida DSM 17836] Length = 256 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 14/182 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D+AI+L + GE + I ++TR +G+ V+ + S R L+ + V + Sbjct: 4 YRDEAIVLRTQKLGEADRIATLLTRTHGKLRAVVKGVRRTSSRFGARLEPFSHVDLQLAT 63 Query: 60 SRLAQ---NLGEFRF--EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R E + S A+ + ++ L + + + E+EP + + +L Sbjct: 64 GRSLDVVTQAVSIAAYGEGIVSDYARYTTGTVLLETVDRL-----VVEEKEPATQQHLLL 118 Query: 115 NIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L ++ + L L G+ C G +P +GG VC Sbjct: 119 AGALRVLSTGEREPRLVLDSFLLRSLAISGYAPSFGDCAKCGEPGPHRAFNPAAGGMVCT 178 Query: 174 SV 175 + Sbjct: 179 TC 180 >gi|163840337|ref|YP_001624742.1| DNA repair protein RecO [Renibacterium salmoninarum ATCC 33209] gi|162953813|gb|ABY23328.1| DNA repair protein [Renibacterium salmoninarum ATCC 33209] Length = 251 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 75/218 (34%), Gaps = 27/218 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------SHRMQPI------LQA 50 ++DDA++L GE + I+ ++TR++G+ + + R++P L + Sbjct: 12 YRDDAVVLRTHKLGEADRIITLLTREHGQIRAVAKGIRRTSSKFGARLEPFMVADLQLIS 71 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 G + + ++ G E A ++ ++ L + E Sbjct: 72 GRSLDIVSQAVSKSAYG-------EQIAAHYDRYTVATAMAETAERLTDA--DSESAGAQ 122 Query: 111 YDMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 Y +L + ++ + L L G+ T C G S GG Sbjct: 123 YRLLIGAFSSLARGEHAPELILDSYLLRALATAGWAPSFTDCARCGNPGPHTAFSAALGG 182 Query: 170 AVCRSVG-----LPYAEKMLVLPSFLWKEEQTIDADSL 202 AVC P A M +LP+ L + D + Sbjct: 183 AVCHDCRPPGSPSPAAATMELLPALLSGDWSIADISPI 220 >gi|24378553|ref|NP_720508.1| DNA repair protein RecO [Streptococcus mutans UA159] gi|42559475|sp|Q8DWM0|RECO_STRMU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|24376403|gb|AAN57814.1|AE014855_4 putative DNA repair protein RecO [Streptococcus mutans UA159] Length = 251 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 82/210 (39%), Gaps = 11/210 (5%) Query: 1 MYWQD-DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R + E + ++++ T G+H+ FVR+ + ++ ++Q L+ N+ Sbjct: 1 MQTKETRGLVLYNRPFREDDKLVKIFTETSGKHMFFVRHATNSKLSSVIQP--LILANFI 58 Query: 60 SRLAQNLGEFRFEVLE--SHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNI 116 ++ + G E + S ++ + L +V L + + L+ L Sbjct: 59 LKINNH-GLSYIEDYKGVSLFKEINADIYKLAYATYLVSLADAAISDAVYDAPLFAFLIK 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW-VSPKSGGAVCRSV 175 L + E+ +L G L+ CV L + S + G +C Sbjct: 118 TLELMDEGLDYEILTNIFEIQILDRFGVQLNFHDCVFCHRV-GLAFDFSHRYSGLLCPEH 176 Query: 176 GLP--YAEKMLVLPSFLWKEEQTIDADSLK 203 Y + +L + QT+ DSLK Sbjct: 177 YEKDLYRSHLDPNVPYLLNQFQTLHFDSLK 206 >gi|257419863|ref|ZP_05596857.1| recombination protein recO [Enterococcus faecalis T11] gi|257161691|gb|EEU91651.1| recombination protein recO [Enterococcus faecalis T11] Length = 262 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+L R Sbjct: 8 GIILFTKDFKEKDKLVKIFTEAYGKLMFFVKGAH-RKNNPLLPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|212715506|ref|ZP_03323634.1| hypothetical protein BIFCAT_00404 [Bifidobacterium catenulatum DSM 16992] gi|212661588|gb|EEB22163.1| hypothetical protein BIFCAT_00404 [Bifidobacterium catenulatum DSM 16992] Length = 242 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 17/184 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 +QD+ ++L GE + I+ ++TR +G+ + + + + L+ V + Sbjct: 4 YQDEGVVLRTVKLGEADRIVTLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVSLLIAE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL----PER-EPCLEL-YDM 113 R + + E + ++ + + I L ER L Sbjct: 64 GRSLDVISQA--ESVSAYARGICTDFKAYTAANVICETADKLVVTEHERSVAQYRLVLGA 121 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGA 170 LN +VIG +V + L G+ L CVV G + S +GG Sbjct: 122 LNALSKHAHEAAVIGDSYV---MRALAIAGWTPRLRACVVCGDPISADRTWFFSISAGGL 178 Query: 171 VCRS 174 +C + Sbjct: 179 MCST 182 >gi|319400902|gb|EFV89121.1| DNA repair protein RecO [Staphylococcus epidermidis FRI909] Length = 253 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 17/185 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M + II+ YGE + I+ ++ + R ++ +++ QA + V Sbjct: 1 MLMKQKGIIIKSVDYGESDRIITILNEYGAKIPLMAR--RAKKVKSGFQANTQLFVYGLF 58 Query: 58 ----WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 WR +G +V+ H L Y + R + E E YD Sbjct: 59 IYNKWRG-----MGTLNSVDVINQHYELQLDLFESSYASLCAETIDRSMEENEVSKYNYD 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGA 170 +L L+ + + V + L + GF C +TG+ L+ S K GA Sbjct: 114 LLQFVLSKINEGTPAQLMSVIVLLKSMSKFGFTASFDHCAITGIQDQSKLIAYSFKYDGA 173 Query: 171 VCRSV 175 + S Sbjct: 174 ISESA 178 >gi|125622947|ref|YP_001031430.1| DNA repair protein RecO [Lactococcus lactis subsp. cremoris MG1363] gi|166221896|sp|A2RHD8|RECO_LACLM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|124491755|emb|CAL96674.1| DNA repair protein recO [Lactococcus lactis subsp. cremoris MG1363] gi|300069687|gb|ADJ59087.1| DNA repair protein RecO [Lactococcus lactis subsp. cremoris NZ9000] Length = 251 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 14/174 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L R+Y EK+ ++++ T +G+ + FV+N LQ + + Sbjct: 7 QGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQ--AFTDGKLTATIND- 63 Query: 66 LGEFRF-----EVL--ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 G F F EV+ ++ A + ++ Y + + + LY L L Sbjct: 64 -GGFSFIEDVSEVVVYKNISADIFINAHASYIISLADAAIS---DNQYDPALYGFLKRSL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + EL +L G L+ ++C T S K G +C Sbjct: 120 ELLDQGFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVGPFDFSYKFSGCLC 173 >gi|319935429|ref|ZP_08009866.1| hypothetical protein HMPREF9488_00697 [Coprobacillus sp. 29_1] gi|319809645|gb|EFW06058.1| hypothetical protein HMPREF9488_00697 [Coprobacillus sp. 29_1] Length = 245 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 8/172 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAG--NLVRVNWRSR 61 + IIL Y E ++IL + T++YG+ R + + Q + + +N + Sbjct: 11 EGIILKKTVYKENDMILHIYTKEYGKIGIIARGIRKITSKNARACQEMMISEMSINLKKG 70 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L+ + + L L S + Y L +R+L + P + YD+L L Sbjct: 71 LSSLMKATPVDYLRHIKENLDSEIVANYVL---EYFYRYLEDNNPNQDEYDILYHSLKAL 127 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 +++ + +L + G +D+ CVV G ++ + +S + GG VC+ Sbjct: 128 DHGYSPLLVYLLFNVFVLNHNGVSIDVEGCVVCGSSK-VTAISLRDGGFVCQ 178 >gi|291456391|ref|ZP_06595781.1| DNA repair protein RecO [Bifidobacterium breve DSM 20213] gi|291381668|gb|EFE89186.1| DNA repair protein RecO [Bifidobacterium breve DSM 20213] Length = 240 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 72/190 (37%), Gaps = 9/190 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 ++D+ ++L GE + I+ ++TR++G+ + + + + L+ V + Sbjct: 5 YRDEGVVLRTAKLGEADRIITLLTREHGKIRAVAKGVRRTKSRFGARLEPFMRVDLLIAE 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIF 117 R + E + S+ A + + IV L E E Y +L Sbjct: 65 GRSLD--VVSQAESVASYGAAIAADYAAYEAANVIVETIDKLVSTEHEQLPNQYRLLIGA 122 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 LN + + + + L G+ L CVV G + + S SGG +C + Sbjct: 123 LNALAKHAHASQTISESYVMRALALAGWTPRLATCVVCGKPER-RYFSIASGGVMCEADH 181 Query: 177 LPYAEKMLVL 186 A ++ L Sbjct: 182 TTDARRIAPL 191 >gi|224369905|ref|YP_002604069.1| RecO [Desulfobacterium autotrophicum HRM2] gi|223692622|gb|ACN15905.1| RecO [Desulfobacterium autotrophicum HRM2] Length = 258 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 12/182 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNL--VRVNWRSR 61 D I+L YG+ ++I+ T GR +N + R L+ ++ + W R Sbjct: 7 DGIVLKRIEYGDNDLIVTFFTTAMGRVSVIAKNAKKSVKRFAGALEPFSVMNLECTW-PR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L L AK+ + ++ Y + + + E + ELY++L L Sbjct: 66 RKNALPLLNAVDLSYPFAKIRTHTVKTGYACYWLELINSSIEEGKKQGELYELLFFVLQA 125 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVT-----GVTQDLLWVSPKSGGAVCRS 174 ++ +I + ++ + G DLT C G+ Q + G VC Sbjct: 126 LDADTMDKEILSLLFQIRFMNLSGLCPDLTSCGTCSTPLDGMAQHRIIFDFAQGCLVCDR 185 Query: 175 VG 176 Sbjct: 186 CA 187 >gi|227874977|ref|ZP_03993126.1| DNA repair protein RecO [Mobiluncus mulieris ATCC 35243] gi|227844426|gb|EEJ54586.1| DNA repair protein RecO [Mobiluncus mulieris ATCC 35243] Length = 243 Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 10/179 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 +D+AI+L + GE + I+ +++ G + R+ L+ +V V R Sbjct: 5 RDEAIVLRTQDLGEADRIVTLLSANNGLVRAVAHGVRKTTSRIGARLEPFGVVDVLIR-- 62 Query: 62 LAQNLGEFRFEVLESHC--AKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIF 117 G E +E+ + +++ L+ +++ L R E Y + Sbjct: 63 -PGRGGLHNVEQVETLAPYGRSIAADYALFTTANLMVETLERLSEEAWATDRYYRLTLGA 121 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + + L LL G+ C G + +P +GGAVC Sbjct: 122 LHALALSRHEPGLVLDSYLLRLLGLAGWAASCWNCATCGAGGPHRYFNPAAGGAVCGEC 180 >gi|227519873|ref|ZP_03949922.1| recombination protein O [Enterococcus faecalis TX0104] gi|227072667|gb|EEI10630.1| recombination protein O [Enterococcus faecalis TX0104] gi|315144806|gb|EFT88822.1| DNA repair protein RecO [Enterococcus faecalis TX2141] Length = 264 Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+L R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLLPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S + G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSRYSGVLCEK 177 >gi|84496823|ref|ZP_00995677.1| DNA repair protein RecO [Janibacter sp. HTCC2649] gi|84383591|gb|EAP99472.1| DNA repair protein RecO [Janibacter sp. HTCC2649] Length = 241 Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 15/185 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D I+L GE + I+ V+TR G+ + + + + L+ G LV + + Sbjct: 4 YRDQGIVLRTHKLGEADRIITVLTRGLGKVRTVGKGVRRTKSRFGARLEPGMLVDLQCYE 63 Query: 60 SRLAQNLGEFR-FEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R NL E LES + ++ + R EREP L+ Y ++ Sbjct: 64 GR---NLDTVTQAETLESWGDVISRDYDVWTAASAVLETCDRLTEEREPALQQYLLVTGA 120 Query: 118 LNCH----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 + P+++ ++ L L G+ C G SGGAVC Sbjct: 121 MRSLAGKEHDPNLVLDAYL---LRALAIAGWAPSFHDCAKCGAEGPHRAFHIVSGGAVCS 177 Query: 174 SVGLP 178 S P Sbjct: 178 SCRPP 182 >gi|269976425|ref|ZP_06183410.1| DNA repair protein RecO [Mobiluncus mulieris 28-1] gi|307701456|ref|ZP_07638475.1| DNA repair protein RecO [Mobiluncus mulieris FB024-16] gi|269935226|gb|EEZ91775.1| DNA repair protein RecO [Mobiluncus mulieris 28-1] gi|307613366|gb|EFN92616.1| DNA repair protein RecO [Mobiluncus mulieris FB024-16] Length = 259 Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 10/179 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 +D+AI+L + GE + I+ +++ G + R+ L+ +V V R Sbjct: 21 RDEAIVLRTQDLGEADRIVTLLSANNGLVRAVAHGVRKTTSRIGARLEPFGVVDVLIR-- 78 Query: 62 LAQNLGEFRFEVLESHC--AKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIF 117 G E +E+ + +++ L+ +++ L R E Y + Sbjct: 79 -PGRGGLHNVEQVETLAPYGRSIAADYALFTTANLMVETLERLSEEAWATDRYYRLTLGA 137 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + + L LL G+ C G + +P +GGAVC Sbjct: 138 LHALALSRHEPGLVLDSYLLRLLGLAGWAASCWNCATCGAGGPHRYFNPAAGGAVCGEC 196 >gi|194333040|ref|YP_002014900.1| DNA repair protein RecO [Prosthecochloris aestuarii DSM 271] gi|238693299|sp|B4S3Q7|RECO_PROA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194310858|gb|ACF45253.1| DNA repair protein RecO [Prosthecochloris aestuarii DSM 271] Length = 264 Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 8/162 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + +IL + +++ I V T +G+ ++ + +++ + GN+V + Sbjct: 1 MLVKTRGVILKEIKFRDQSKICPVFTEHFGKISVILKGVRNPKNKLSGVFSTGNMVELVI 60 Query: 59 RSRL--AQNLGEFRFEVLESHCAK-LLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + +L + A+ + +Y Q I L + EP L+ L Sbjct: 61 YKKQNRDLHLVSDALLLQSPMSARPDMERFTTIY--QLIETLKQVTGSEEPHPVLFRFLA 118 Query: 116 IFLNCHKIPSVIGKIFVQIEL-MLLKNIGFGLDLTKCVVTGV 156 + P ++ + L L+ +GF +L +CV++G Sbjct: 119 ATIEELCKPERDYQLVLAWFLIRLVTVLGFEPELEQCVISGE 160 >gi|254785339|ref|YP_003072768.1| DNA repair protein RecO [Teredinibacter turnerae T7901] gi|237685975|gb|ACR13239.1| DNA repair protein RecO [Teredinibacter turnerae T7901] Length = 236 Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 12/152 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL--QAGNLVRVNWRSR 61 Q+ +L RS+ + IILE+ TRQ+G+ V S + Q Q + V++ Sbjct: 7 QEVGFLLHSRSFTDSRIILELFTRQHGKLKA-VHRLPSRKRQATTKPQPFIPLVVHYSGS 65 Query: 62 LAQNLGEFR-FEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 GE + LE+ A +L + L+ GL L + LP L+ L Sbjct: 66 -----GELKNLSDLETLSAPILGAGTSLFCGLYLNELLQKLLPVEFEYAGLFASYQRALL 120 Query: 120 CHKI--PSVIGKIFVQIELMLLKNIGFGLDLT 149 P + EL LL +G+G++ + Sbjct: 121 SLSQAVPGEEDIPLREFELQLLAELGYGINFS 152 >gi|306818296|ref|ZP_07452025.1| recombination protein O [Mobiluncus mulieris ATCC 35239] gi|304648941|gb|EFM46237.1| recombination protein O [Mobiluncus mulieris ATCC 35239] Length = 243 Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 10/179 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 +D+AI+L + GE + I+ +++ G + R+ L+ +V V R Sbjct: 5 RDEAIVLRTQDLGEADRIVTLLSANNGLVRAVAHGVRKTTSRIGARLEPFGVVDVLIR-- 62 Query: 62 LAQNLGEFRFEVLESHC--AKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIF 117 G E +E+ + +++ L+ +++ L R E Y + Sbjct: 63 -PGRGGLHNVEQVETLAPYGRSIAADYALFTTANLMVETLERLSEEAWATDRYYRLTLGA 121 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + + L LL G+ C G + +P +GGAVC Sbjct: 122 LHALALSRHEPGLVLDSYLLRLLGLAGWAASCWNCATCGAGGPHRYFNPAAGGAVCGEC 180 >gi|228475983|ref|ZP_04060691.1| DNA repair protein RecO [Staphylococcus hominis SK119] gi|228269806|gb|EEK11286.1| DNA repair protein RecO [Staphylococcus hominis SK119] Length = 249 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 74/194 (38%), Gaps = 17/194 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG-RHLGFVRNGQSHR--MQPILQA---GNLV 54 M + II+ YGE + I+ ++ ++G + VR + + +Q Q G + Sbjct: 1 MLEKQKGIIIKSVDYGESDKIITIL-NEHGAKIPIMVRRAKKSKTGLQAHTQLFVYGLFI 59 Query: 55 RVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 W+ +G +V+ + L Y + + R L E L Y + Sbjct: 60 YNKWKG-----MGTLSSIDVINQYYQLRLDIFDSSYATLCVEAIDRSLEPDEVSLYHYKL 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAV 171 L LN + + + + L + GFG C +TG T L+ S K G + Sbjct: 115 LEFVLNKISEGNSAQLMSIIVLLKCMNKFGFGAFFNYCAITGDTDQSKLIAYSFKYDGTI 174 Query: 172 CRSV--GLPYAEKM 183 +V PYA K+ Sbjct: 175 SETVLNNDPYALKL 188 >gi|87310533|ref|ZP_01092662.1| probable DNA repair protein recO [Blastopirellula marina DSM 3645] gi|87286754|gb|EAQ78659.1| probable DNA repair protein recO [Blastopirellula marina DSM 3645] Length = 250 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 15/169 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP-----ILQAGNLVRVNWRSR 61 I++ + + E + I + T +G+ G + + + +L +V ++ + Sbjct: 8 GIVIRIVEFSESSCITTLFTEDFGKISGIAKGCRRPKSAFESAIDLLSLCRIVFLH---K 64 Query: 62 LAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +L ++L + S G L F E +P EL+ + + L Sbjct: 65 TSDSLDILTEAKLLRKFRSAQRSLPHLYAGYYIAELLGEFTHESDPYAELFHIADQTLAE 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + K+ + EL LL+ +G +L+ CV TG +PK+G Sbjct: 125 LDGGGNVPKLVLHFELSLLRLLGQLPELSFCVDTGRP------APKTGR 167 >gi|121534211|ref|ZP_01666036.1| DNA repair protein RecO [Thermosinus carboxydivorans Nor1] gi|121307314|gb|EAX48231.1| DNA repair protein RecO [Thermosinus carboxydivorans Nor1] Length = 248 Score = 61.7 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 70/181 (38%), Gaps = 7/181 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW- 58 + +AI+L VR G + ++ + +RQYG+ + LQ + V + Sbjct: 4 EYSVEAILLTVRDCGTADRMVTLFSRQYGKIAAVAFGARRPKSSFAGCLQPFSHVDLLLV 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R+R + + + E++ H +Y + PE +P E++++L L Sbjct: 64 RNRGGECI--RQCEIIRGHRKLREELPRMVYTALVAEIVTELWPEHQPDPEVFELLLDVL 121 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL-LWVSPKSGGAVCRSVGL 177 + + + LL GF + +CV G L + +GG +C + G Sbjct: 122 SALEERNPRVAAIAAA-WQLLALAGFAPEYRRCVACGSGVSLPAHFNIGAGGVMCPACGG 180 Query: 178 P 178 Sbjct: 181 S 181 >gi|292669774|ref|ZP_06603200.1| DNA repair protein RecO [Selenomonas noxia ATCC 43541] gi|292648571|gb|EFF66543.1| DNA repair protein RecO [Selenomonas noxia ATCC 43541] Length = 243 Score = 61.7 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 15/182 (8%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGN---LVRVNWR-- 59 + I+LG R++GE + I+ V TR+ G R + L AG V + + Sbjct: 6 AEGIVLGARNWGEADKIVTVFTRRQGILRAAAFG--CRRPRSPL-AGAMQMFVHADLQLA 62 Query: 60 --SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 +RL V + H L + Y + FLPE +D L Sbjct: 63 EGARLETVK---TASVRDHHAKISLDLASLAYATFVAEVIREFLPEGVSDEAFFDRLVHI 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVG 176 L + + + + +L G +C+ G + + + GGA+C Sbjct: 120 LTAFETRNPRVTALASV-VQILAAAGLQQSYERCIHCGKAIEGDAFFLAREGGALCADCR 178 Query: 177 LP 178 Sbjct: 179 TE 180 >gi|111221453|ref|YP_712247.1| DNA repair protein RecO [Frankia alni ACN14a] gi|111148985|emb|CAJ60665.1| DNA repair protein recO (Recombination protein O) [Frankia alni ACN14a] Length = 241 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 8/179 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D+ ++L E + I+ V+TR+ GR + + S R L+ G V + Sbjct: 2 YRDEGVVLRTTPLAEADRIITVLTRRGGRVRAVAKGVRKTSSRFGSRLEPGTYVDLMLHS 61 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + L + + ER+P L L+ +L L Sbjct: 62 GRSLDTVTQADIISPYGTTIALDYARHTAAAVMLETAERLTSEERQPALRLFLLLVGGLR 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + LL+++ G+G+ L C G L +S GG VC Sbjct: 122 TLAAGQRPAPLVL--DAYLLRSLAVSGYGMALDDCARCGEPGQHLSLSVAGGGVVCPQC 178 >gi|332678542|gb|AEE87671.1| DNA recombination and repair protein RecO [Francisella cf. novicida Fx1] Length = 232 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 15/145 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ V TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQP--LVKLRGQINLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 L + E +ES K + L L + ++ L + E + L+D + L Sbjct: 64 GLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEED---ILFDKYDFILRNID 120 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGL 146 + + ++ EL LL ++G G+ Sbjct: 121 EAN--YRHLLRMFELELLNSLGQGI 143 >gi|311742976|ref|ZP_07716784.1| recombination protein O [Aeromicrobium marinum DSM 15272] gi|311313656|gb|EFQ83565.1| recombination protein O [Aeromicrobium marinum DSM 15272] Length = 262 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 13/219 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR- 59 ++D ++L GE + I+ ++TR++G+ + + R+ ++ V V + Sbjct: 24 YRDVGVVLRTHKLGEADRIITLLTREHGQVRAVAKGVRKTTSRLGGRVEPFMHVDVQFAV 83 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFLPE-REPCLELYDMLNIF 117 R + + E + L + G + R + + EP ++ Y +L Sbjct: 84 GRTLD-IVT-QVETITPFAQHLGADYGAYTAGTAMLETAERLVDDGGEPAVQQYQLLVGA 141 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV- 175 L + + +L L G+ C G SGG +C + Sbjct: 142 LRALTEGRHNPGMILDSYQLRALAIAGYAPSFGLCARCGAPGPHRNFHAPSGGILCDTCR 201 Query: 176 ----GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTD 210 P + +L + L + +T+D ++ + T Sbjct: 202 MPGSAAPSPSAVTLLAALLSGDWETVDVSDDRARRESTG 240 >gi|254369112|ref|ZP_04985124.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica FSC022] gi|157122062|gb|EDO66202.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica FSC022] Length = 232 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 15/145 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ V TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQP--LVKLRGQINLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 L + E +ES K + L L + ++ L + E + L+D + L Sbjct: 64 GLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEED---VLFDKYDFILRNID 120 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGL 146 + + ++ EL LL ++G G+ Sbjct: 121 EAN--YRHLLRMFELELLNSLGQGI 143 >gi|89256109|ref|YP_513471.1| DNA repair protein recO [Francisella tularensis subsp. holarctica LVS] gi|115314583|ref|YP_763306.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica OSU18] gi|134301757|ref|YP_001121725.1| DNA repair protein RecO [Francisella tularensis subsp. tularensis WY96-3418] gi|167010796|ref|ZP_02275727.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica FSC200] gi|169656567|ref|YP_001428192.2| putative DNA repair protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187931491|ref|YP_001891475.1| RecFOR complex, RecO component [Francisella tularensis subsp. mediasiatica FSC147] gi|254367434|ref|ZP_04983460.1| DNA repair protein recO [Francisella tularensis subsp. holarctica 257] gi|290954506|ref|ZP_06559127.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica URFT1] gi|295312022|ref|ZP_06802837.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica URFT1] gi|89143940|emb|CAJ79159.1| DNA repair protein recO [Francisella tularensis subsp. holarctica LVS] gi|115129482|gb|ABI82669.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica OSU18] gi|134049534|gb|ABO46605.1| DNA repair protein RecO [Francisella tularensis subsp. tularensis WY96-3418] gi|134253250|gb|EBA52344.1| DNA repair protein recO [Francisella tularensis subsp. holarctica 257] gi|164551635|gb|ABU61236.2| putative DNA repair protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712400|gb|ACD30697.1| RecFOR complex, RecO component [Francisella tularensis subsp. mediasiatica FSC147] Length = 232 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 15/145 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ V TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQP--LVKLRGQINLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 L + E +ES K + L L + ++ L + E + L+D + L Sbjct: 64 GLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEED---VLFDKYDFILRNID 120 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGL 146 + + ++ EL LL ++G G+ Sbjct: 121 EAN--YRHLLRMFELELLNSLGQGI 143 >gi|251781487|ref|YP_002995788.1| DNA repair protein RecO [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390115|dbj|BAH80574.1| DNA repair protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126280|gb|ADX23577.1| DNA repair protein RecO [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 254 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 76/208 (36%), Gaps = 7/208 (3%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L R+Y E + ++++ T G+ + FV++ ++ ++Q + Sbjct: 1 MQLNESLGIVLFNRNYREDDKLVKIFTETAGKRMFFVKHISRSKLSSVIQPLTAADFIF- 59 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 +L ++ + + + ++ LF Y + + + EP L+ L Sbjct: 60 -KLNESGLSYIDDYNHVDTYQQINQDLFRLSYASYVVALADAAISDNEPDPHLFAFLKKT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + E+ +L+ G ++ CV S G +C Sbjct: 119 LDLMEEGLDYEVLTNIFEIQVLERFGIRINFHDCVFCHRVGLPFDFSHHYSGVLCPEHYH 178 Query: 178 --PYAEKMLVLPSFLWKEEQTIDADSLK 203 Y + +L QTI D L+ Sbjct: 179 KDDYRNHLDPNVIYLLDRFQTIQFDELR 206 >gi|299139030|ref|ZP_07032207.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX8] gi|298599184|gb|EFI55345.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX8] Length = 249 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 36/237 (15%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L + E ++++ TR G+ G R+ R + L+ VR ++ R Sbjct: 12 EAIVLRTWPFHEADLLISFFTRDQGKVKGVARHAMKSRRRFGGALEPATHVRAHYTERP- 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFL-------YGLQSIV-PLFRFLPEREPCLELYDMLN 115 R E++ ++L S L GLQ +V L +P+ P ++ + Sbjct: 71 ------RQELVRLDNFEILWSPLTAPVDYLRTAGLQLVVEVLEEAMPDLAPEDNIFRLAL 124 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSP-------- 165 L + SV + L + + +G+ +L C V G + +W SP Sbjct: 125 ATLTAMQADSVWLPV-TYFCLWMNRLMGWMPELGHCAVCGLDLRGQTVWWSPAGDGVTCH 183 Query: 166 ---KSG-GAVC-RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 +SG + SV Y LP + A L++ T L ++ Sbjct: 184 DDRRSGSRPLSAESVAESYRIARSSLPQLAEESWSEGRAKDLRAFAIGT---LERHL 237 >gi|115376813|ref|ZP_01464037.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] gi|115366175|gb|EAU65186.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] Length = 223 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 56/162 (34%), Gaps = 11/162 (6%) Query: 22 LEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQNLGEF----RFEVLE 75 + ++TRQ+G+ F + R L+ +RV+ L + G ++L Sbjct: 2 VTLLTRQHGKLTAFAAGARKSKRRFAGALEPFMYLRVH----LVETRGSTVRLDSTDILA 57 Query: 76 SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIE 135 + A L L ++ + EP EL+ +L +L + E Sbjct: 58 GYYAARQELPLIARALYAVEMCRELTRDHEPHPELFALLEEYLVRLNAKEAGPTSLLAFE 117 Query: 136 LMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVG 176 L L + G C + G + GGAVC G Sbjct: 118 LSALAHAGLMPRFDACALCGGEPGERPRFDQAHGGAVCEPCG 159 >gi|78044245|ref|YP_359299.1| putative DNA repair protein RecO [Carboxydothermus hydrogenoformans Z-2901] gi|123576933|sp|Q3AEY5|RECO_CARHZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|77996360|gb|ABB15259.1| putative DNA repair protein RecO [Carboxydothermus hydrogenoformans Z-2901] Length = 240 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 13/179 (7%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 D+ I+L +G+ + +L ++T++ G+ + + + L + + R Sbjct: 6 DEGIVLKGSDFGDGHRMLTIITKELGKIKAVAYGAKKVKSKKRGALLEFSRTNIYLRQSN 65 Query: 63 AQNLGEFRFEVLES--HCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 F E E + L + L+ I L RF P + +LY+ + L Sbjct: 66 D----YFIVEQAEGIEYFPNLYGNKDLLHAAGQIAWLTDRFWPLGQLNPKLYNWVLYSLR 121 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVT--GVTQDLLWVSPKSGGAVCRSV 175 V KI ++ EL LL GF T C V ++ + GG VC S Sbjct: 122 LLNS-GVWPKIVLRNFELKLLAFTGFRPITTHCAVCRKPYRGEVWYFGAGEGGIVCPSC 179 >gi|227504557|ref|ZP_03934606.1| DNA repair protein RecO [Corynebacterium striatum ATCC 6940] gi|227198877|gb|EEI78925.1| DNA repair protein RecO [Corynebacterium striatum ATCC 6940] Length = 239 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 22/189 (11%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQ---------- 49 ++D A+++ +GE + ++ ++TR +G G + + + + LQ Sbjct: 5 NFRDRALVIRSYDFGEADRVIVLLTRNHGLVRGVAKGVRRAKSRFGSRLQLFVNLDVQLY 64 Query: 50 AGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE 109 G + ++ G E E + A L+S L + +P Sbjct: 65 PGRNLYTISQADTVDYFGANIIEDYERYTA-------ACAALESAERLAFTDADSDPY-- 115 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 LY L L + + L + + G+ L C P GG Sbjct: 116 LYTALVHTLQVMQYDD-PLQALDAFLLQAMAHAGWAPSLFDCAQCQKPGPHHAFHPAVGG 174 Query: 170 AVCRSVGLP 178 A C P Sbjct: 175 AACHECRPP 183 >gi|258516215|ref|YP_003192437.1| DNA repair protein RecO [Desulfotomaculum acetoxidans DSM 771] gi|257779920|gb|ACV63814.1| DNA repair protein RecO [Desulfotomaculum acetoxidans DSM 771] Length = 244 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 70/189 (37%), Gaps = 14/189 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++ +A++L R E + +L + +RQ+G+ S R + +Q + Sbjct: 4 YKAEAVVLRTRELREADKLLVLYSRQHGKITVAAHGVSKPSSRKRGSVQPFCHTNFLLHK 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIFL 118 R ++ + + +E A L S+ L +V L E +P ++ +L Sbjct: 64 GRQLDSVS--QCDGVE-IFAHLRSNFELLSCASYLVELVEAFSVEGDPNEYVFLLLVSIF 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL----LWVSPKSGGAVCRS 174 P + E+ LL GF CV + L + SP GG +C+S Sbjct: 121 -HLLNPLDAELLTRAFEIKLLTVFGFRPHWESCV--HCREPLSSGEIRFSPAMGGVLCQS 177 Query: 175 VGLPYAEKM 183 A + Sbjct: 178 CLEQDARAL 186 >gi|315032902|gb|EFT44834.1| DNA repair protein RecO [Enterococcus faecalis TX0017] Length = 264 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+L R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLLPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKGVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFESQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|162449950|ref|YP_001612317.1| DNA repair protein RecO (recombination protein O) [Sorangium cellulosum 'So ce 56'] gi|161160532|emb|CAN91837.1| DNA repair protein RecO (recombination protein O) [Sorangium cellulosum 'So ce 56'] Length = 239 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 79/219 (36%), Gaps = 24/219 (10%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLA-- 63 A+++ +GE ++++ + T Q G R + + P L+ +L+RV R Sbjct: 16 ALLVRRVPFGEADLLVGLFTEQGGLISATARGARRSAKRFPALEPMHLLRVTLEIRPGAE 75 Query: 64 -QNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L E E A L L+ + + P + LN L+ Sbjct: 76 LAQLTEAAIERPRLRLAADLGRLEVAGRALRWVREIA---PAHTAEQAAWSELNQLLDRL 132 Query: 122 KIPSVIGKIFVQIE--LMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRSVG 176 S + E L LL G+GL+LT+CV G T P GG VCR+ G Sbjct: 133 DEVSTPPPQALLAETGLRLLVAFGWGLELTQCVRCGRACDTTQSACADPARGGLVCRACG 192 Query: 177 L-------PYAEKMLVLPSFLWKEEQTIDADSLKSAFQL 208 E++L + L I + + A L Sbjct: 193 GGPVVLRPEPRERLLA--AML--GGAPIPEEDVPLALDL 227 >gi|326692994|ref|ZP_08229999.1| DNA repair protein RecO [Leuconostoc argentinum KCTC 3773] Length = 263 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 4/183 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR-SRLA 63 I+L R Y + ++++ ++T G R + + +Q ++ + Sbjct: 6 GIVLYTRQYKDHDLLVRMLTENDGLRTFLARGAKKPKSTLSAAVQPFTILSFEGALPKRH 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCHK 122 LG + +L+ I L + E EP Y + L + Sbjct: 66 TGLGYINDAQQANLYPRLIDDIEANAYAALIASLIDQSYEEGEPLTRWYHQFELALQKLE 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I E+ LL +G + ++G S K G + + Sbjct: 126 AGLDPQVIANIFEIQLLVPLGVAPNWRADPISGQVTGRFDYSEKYNGILAEEHYDLDEHR 185 Query: 183 MLV 185 +++ Sbjct: 186 LML 188 >gi|322410830|gb|EFY01738.1| DNA repair protein RecO [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 254 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 76/208 (36%), Gaps = 7/208 (3%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L R+Y E + ++++ T G+ + FV++ ++ ++Q + Sbjct: 1 MQLNESLGIVLFNRNYREDDKLVKIFTEAAGKRMFFVKHISRSKLSSVIQPLTAADFIF- 59 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 +L ++ + + + ++ LF Y + + + EP L+ L Sbjct: 60 -KLNESGLSYIDDYNHVDTYQQINQDLFRLSYASYVVALADAAISDNEPDPHLFAFLKKT 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + + E+ +L+ G ++ CV S G +C Sbjct: 119 LDLMEEGLDYEVLTNIFEIQVLERFGIRINFHDCVFCHRVGLPFDFSHHYSGVLCPEHYH 178 Query: 178 --PYAEKMLVLPSFLWKEEQTIDADSLK 203 Y + +L QTI D L+ Sbjct: 179 KDDYRNHLDPNVIYLLDRFQTIQFDELR 206 >gi|242373871|ref|ZP_04819445.1| recombination protein RecO [Staphylococcus epidermidis M23864:W1] gi|242348425|gb|EES40027.1| recombination protein RecO [Staphylococcus epidermidis M23864:W1] Length = 253 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 15/202 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQA---GNLVR 55 M + II+ YGE + I+ ++ + R + + +Q Q G + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGLQAHTQMFVYGLFIY 60 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 WR +G +V+ H L Y + R + E E Y++L Sbjct: 61 NKWRG-----MGTLNSVDVINQHYELQLDLYESSYASLCAETIERSMEENEVSKYNYELL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVC 172 + L + + + + L + GF +CV+TG L+ S K GA+ Sbjct: 116 HFVLTKISEGTSAQLMSIVVLLKCMAKFGFTASFNRCVITGNDDQSKLMGYSFKFDGAIS 175 Query: 173 RSVG--LPYAEKMLVLPSFLWK 192 + V P+A K+ +L Sbjct: 176 QEVAYQDPHALKLTNRSLYLLD 197 >gi|225377162|ref|ZP_03754383.1| hypothetical protein ROSEINA2194_02808 [Roseburia inulinivorans DSM 16841] gi|225211067|gb|EEG93421.1| hypothetical protein ROSEINA2194_02808 [Roseburia inulinivorans DSM 16841] Length = 260 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 31/201 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L G+ + + ++TR+ G+ F R + Q L A N Sbjct: 9 GMVLNAMPIGDYDKRITLLTRERGKITAFARGARKPNSQ-FLAATNPFSF---------- 57 Query: 67 GEFRFEVLESHCAKLLSS--------------SLFLYGLQSIVPLFRFLPEREPCLELYD 112 GEF E+ E ++ + YG + + E E+ Sbjct: 58 GEF--ELFEGRSTYTVAKVSIQNYFRELAADFNAAYYGFYFLEFADYYCQENNDETEMLK 115 Query: 113 MLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 +L L + P+ ++ EL L G ++ C G + L W S K+ + Sbjct: 116 LLYQTLRALESPAFSNRLVRCIYELRTLTINGEAPNVFGCTKCGKKEALHWFSGKTARML 175 Query: 172 CRSVGLPYAEK---MLVLPSF 189 C K M LP++ Sbjct: 176 CDHCVNELRRKPENMAALPTY 196 >gi|329116597|ref|ZP_08245314.1| DNA repair protein RecO [Streptococcus parauberis NCFD 2020] gi|326907002|gb|EGE53916.1| DNA repair protein RecO [Streptococcus parauberis NCFD 2020] Length = 257 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 12/207 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 Q I+L +++ E + ++++ T Q G+ + FV++ ++ ++Q L ++ +L Sbjct: 5 QSHGIVLYNKNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLSSVIQP--LTAADFILKLN 62 Query: 64 Q-NLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 L + E + + + S Y + ++ L + E +L+ L L Sbjct: 63 DIGLSYIEDYNQVETYKKINQDIFTLSYATY-ITALT--DAALKDNEIDAQLFAFLKKTL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + E+ +L G L+ CV T S K G +C Sbjct: 120 DLMEEGLDYEVMANIFEVQILDRFGVRLNFHDCVFCHRTGLPFDFSHKYSGVLCPQHYHE 179 Query: 179 YAEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L + Q I D LK Sbjct: 180 DIHRNHLDPNVVYLLDQFQAIHFDELK 206 >gi|311104759|ref|YP_003977612.1| DNA repair protein RecO [Achromobacter xylosoxidans A8] gi|310759448|gb|ADP14897.1| DNA repair protein RecO [Achromobacter xylosoxidans A8] Length = 195 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 6/144 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 +L ++ E ++I++ +R +G + + ++P+L A + ++W Sbjct: 12 PGYMLHATAWRETSLIVQTFSRDHGCVAMVAKGAKRPYSVLRPVLSAFQPLLLSWTG-NG 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + R E+ L+ + + L R LP + LYD + L Sbjct: 71 EVKTLTRAEIAGIRP---LTGTALMSAWYLNELLLRLLPREDAHPLLYDAYDFALQQLSG 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD 147 + + E LL+ G+G+D Sbjct: 128 GTRAAGALRRFEWTLLRETGYGVD 151 >gi|329735352|gb|EGG71644.1| DNA repair protein RecO [Staphylococcus epidermidis VCU045] Length = 253 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 17/185 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M + II+ YGE + I+ ++ + R ++ +++ LQA + V Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMAR--RAKKVKSGLQANTQLFVYGLF 58 Query: 58 ----WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 WR +G +V+ H L + R + E E YD Sbjct: 59 IYNKWRG-----MGTLNSVDVINQHYELQLDLFESSCASLCAETIDRSMEENEVSKYNYD 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGA 170 +L L+ + + V + L + GF C +TG+ L+ S K GA Sbjct: 114 LLQFVLSKINEGTPAQLMSVIVLLKNMSKFGFTASFDHCAITGIQDQSKLIAYSFKFDGA 173 Query: 171 VCRSV 175 + S Sbjct: 174 ISESA 178 >gi|313889561|ref|ZP_07823206.1| DNA repair protein RecO [Streptococcus pseudoporcinus SPIN 20026] gi|313122070|gb|EFR45164.1| DNA repair protein RecO [Streptococcus pseudoporcinus SPIN 20026] Length = 257 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 76/187 (40%), Gaps = 4/187 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L ++Y E + ++++ T G+ + F+++ ++ ++Q L ++ ++ + Sbjct: 8 ALVLYNKNYREDDKLVKLFTETAGKRMFFIKHASKSKLASVIQP--LTIADFMLKINEKG 65 Query: 67 GEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + + + ++ L Y + + +P+ EP +L+ L+ + Sbjct: 66 LSYIDDYNDVQTYPRINQDLYRLAYATYVMSLVDAAIPDNEPDSQLFAFARKTLDLMEEG 125 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L+ G L+ +CV S K G +C + + Sbjct: 126 LDYEILTNIFEIQILERFGVRLNFHECVFCHRVGLPFDFSHKYSGPLCPNHLYEDTHRSH 185 Query: 185 VLPSFLW 191 + P+ L+ Sbjct: 186 LDPNVLY 192 >gi|281490531|ref|YP_003352511.1| DNA repair protein RecO [Lactococcus lactis subsp. lactis KF147] gi|281374349|gb|ADA63882.1| DNA repair protein RecO [Lactococcus lactis subsp. lactis KF147] Length = 251 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 14/174 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L R+Y EK+ ++++ T +G+ + FV+N LQ + + Sbjct: 7 QGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQ--AFTDGKLTATIND- 63 Query: 66 LGEFRF-----EVL--ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 G F F EV+ ++ + + ++ Y + + + LY L L Sbjct: 64 -GGFSFIEDVSEVVVYKNISSDIFINAHASYIISLADAAIS---DNQYDPGLYGFLKRSL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + EL +L G L+ ++C T S K G +C Sbjct: 120 ELLDQGFDMEVVTNIFELQVLHRFGISLNFSECAFCHKTVGPFDFSYKFSGCLC 173 >gi|15672040|ref|NP_266214.1| DNA repair protein RecO [Lactococcus lactis subsp. lactis Il1403] gi|13878683|sp|Q9CJD9|RECO_LACLA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|12722899|gb|AAK04156.1|AE006244_5 hypothetical protein L1006 [Lactococcus lactis subsp. lactis Il1403] gi|326405649|gb|ADZ62720.1| DNA repair protein RecO [Lactococcus lactis subsp. lactis CV56] Length = 251 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 14/174 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L R+Y EK+ ++++ T +G+ + FV+N LQ + + Sbjct: 7 QGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQ--AFTDGKLTATIND- 63 Query: 66 LGEFRF-----EVL--ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 G F F EV+ ++ + + ++ Y + + + LY L L Sbjct: 64 -GGFSFIEDVSEVVVYKNISSDIFINAHASYIISLADAAIS---DNQYDPGLYGFLKRSL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + EL +L G L+ ++C T S K G +C Sbjct: 120 ELLDQGFDMEVVTNIFELQVLHRFGISLNFSECAFCHKTVGPFDFSYKFSGCLC 173 >gi|315222411|ref|ZP_07864315.1| DNA repair protein RecO [Streptococcus anginosus F0211] gi|315188496|gb|EFU22207.1| DNA repair protein RecO [Streptococcus anginosus F0211] Length = 257 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 75/205 (36%), Gaps = 6/205 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L R++ E + ++++ T Q G+ + FV++ ++ ++ P++Q LV ++ ++ Sbjct: 6 TSKGLVLYNRNFRENDKLVKIFTEQAGKRMFFVKHARNSKLNPVVQP--LVVADFLMKIN 63 Query: 63 AQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L ++ + + Y + + + + L+ L L Sbjct: 64 DDGLSYIDDYQEVTTFQHINHDLFTMAYATYVVALADASIQDNKIDSALFAFLQKTLELM 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + E+ +L G L+ +C S G +C Sbjct: 124 EQGLDYEVLTNIFEIQILSRFGISLNFHECCFCHRVGLPFDFSFTYNGVLCSEHYNKDER 183 Query: 182 KMLVLP--SFLWKEEQTIDADSLKS 204 + + P +L + Q + L++ Sbjct: 184 RSHLDPNIPYLLDQFQAVQFSELEN 208 >gi|225351488|ref|ZP_03742511.1| hypothetical protein BIFPSEUDO_03083 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157832|gb|EEG71115.1| hypothetical protein BIFPSEUDO_03083 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 242 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 66/182 (36%), Gaps = 17/182 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW-R 59 +QD+ ++L GE + I+ ++TR +G+ + + + + L+ V + Sbjct: 4 YQDEGVVLRTVKLGEADRIVTLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVSLLIAE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYD----M 113 R + + E + ++ + + I L E+E + Y Sbjct: 64 GRSLDVISQA--ESVSAYARGICTDFKAYTAANVICETADKLVVTEQERSVAQYRLVLGA 121 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGA 170 LN + IG +V + L G+ L CVV G + S +GG Sbjct: 122 LNALSKHAHEAAAIGDSYV---MRALAIAGWTPRLRACVVCGEPISADRPWFFSISAGGL 178 Query: 171 VC 172 +C Sbjct: 179 MC 180 >gi|152967319|ref|YP_001363103.1| DNA repair protein RecO [Kineococcus radiotolerans SRS30216] gi|151361836|gb|ABS04839.1| DNA repair protein RecO [Kineococcus radiotolerans SRS30216] Length = 269 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 22/189 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D+A++L GE + I+ ++TR +GR + + S R L+ V V R Sbjct: 20 YRDEAVVLRTAKLGEADRIVSLLTRHHGRVRAVAKGVRRTSSRFGARLEPFTCVDVQLHR 79 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER----------EPCLE 109 R + + A + YGL ++ ER + L Sbjct: 80 GRSLDTVTQADV------LAPYGQVLVADYGLYTVGHALLETAERFTEVERETATQQYLL 133 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L L S++ ++ L L G+ C G + +GG Sbjct: 134 LVGALRSLSRREHDASLVLDAYL---LRSLAVAGYAASFGDCARCGEAGPHAAFNVSAGG 190 Query: 170 AVCRSVGLP 178 AVC S P Sbjct: 191 AVCPSCRPP 199 >gi|315150152|gb|EFT94168.1| DNA repair protein RecO [Enterococcus faecalis TX0012] Length = 264 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+ + R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLMPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|307287712|ref|ZP_07567755.1| DNA repair protein RecO [Enterococcus faecalis TX0109] gi|306501450|gb|EFM70753.1| DNA repair protein RecO [Enterococcus faecalis TX0109] gi|315164811|gb|EFU08828.1| DNA repair protein RecO [Enterococcus faecalis TX1302] Length = 262 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWRSRLA 63 IIL + + EK+ ++++ T YG+ + FV+ + P+ + R Sbjct: 8 GIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAH-RKNNPLMPAILPFTEAVYIGNFR-E 65 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 + L + + + ++ Y L + + L+ ++ Sbjct: 66 EGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAI-----EDQHYDPNLFQFTHMA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ I E+ LL+ G + CV G TQ S K G +C Sbjct: 121 LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEK 177 >gi|254373185|ref|ZP_04988674.1| hypothetical protein FTCG_00767 [Francisella tularensis subsp. novicida GA99-3549] gi|151570912|gb|EDN36566.1| hypothetical protein FTCG_00767 [Francisella novicida GA99-3549] Length = 232 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ V TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQP--LVKLRGQINLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 +L + E +ES K + L L + ++ L + E + L+D + L Sbjct: 64 SLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEED---VLFDKYDFILRNID 120 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGL 146 + + ++ EL LL ++G G+ Sbjct: 121 EAN--YRHLLRMFELELLNSLGQGI 143 >gi|89889972|ref|ZP_01201483.1| putative DNA repair protein, RecO [Flavobacteria bacterium BBFL7] gi|89518245|gb|EAS20901.1| putative DNA repair protein, RecO [Flavobacteria bacterium BBFL7] Length = 240 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 64/171 (37%), Gaps = 18/171 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--------QPILQAGN 52 M + AI+L YGE ++I + T++ G ++ + R QP++Q Sbjct: 1 MLTRTPAIVLSTIKYGEADLIARLYTKELGTQSYMLKGVRKSRKGKLRVSYFQPLVQLEI 60 Query: 53 LVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + + L + + E + + S + I L + L E++P ELY+ Sbjct: 61 VTHHKGKGSL-EYIKEAQVTPAYDTIHTDIVKSSVVMFFSEI--LTQLLTEQQPDSELYE 117 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 L+ + ++ + L +GF DL T DL + Sbjct: 118 YLSSIFQFLDQIDAVANFSIKTLIDLTSYMGFQPDLE-------TVDLPYF 161 >gi|77164312|ref|YP_342837.1| recombination protein O, RecO [Nitrosococcus oceani ATCC 19707] gi|254434720|ref|ZP_05048228.1| DNA repair protein RecO [Nitrosococcus oceani AFC27] gi|92087029|sp|Q3JCY9|RECO_NITOC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|76882626|gb|ABA57307.1| DNA replication and repair protein RecO [Nitrosococcus oceani ATCC 19707] gi|207091053|gb|EDZ68324.1| DNA repair protein RecO [Nitrosococcus oceani AFC27] Length = 246 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 9/153 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVNWRSRL 62 A +L R Y E + ++EV T +YGR G V G + +LQ + ++W R Sbjct: 7 PAYVLHSRPYRETSALVEVFTPEYGRV-GLVAKGVKRQRTHRFSLLQPFCPLLLSWTGRG 65 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L E + + L ++ R+P L+ + L Sbjct: 66 D--LVTLTGAEAAGPIPVLTGEGLICAFYLNELLLRLLPR--RDPLEALFSVYAHSLPSL 121 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 +I E LL +G+GL L T Sbjct: 122 IHAQQRQQILRLFERDLLAYLGYGLILKYEAGT 154 >gi|91227850|ref|ZP_01262023.1| DNA repair protein RecO [Vibrio alginolyticus 12G01] gi|91188360|gb|EAS74656.1| DNA repair protein RecO [Vibrio alginolyticus 12G01] Length = 207 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 17/130 (13%) Query: 35 FVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ 92 + +S R ++ LQ + + W + G + A+ +S L L G+ Sbjct: 4 MAKGARSKRSNLKGALQPFTPLLLKWSGK-----GSMK----TLRQAEPISLGLPLTGIN 54 Query: 93 SIVPLF------RFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGL 146 ++ R L P L+ L + EL LL +G+G+ Sbjct: 55 LYSAMYVNELIGRILMAEVPMPALFHDYLHALTELAHNENPEPALRRFELALLSAMGYGV 114 Query: 147 DLTKCVVTGV 156 D C TG Sbjct: 115 DFLHCAGTGE 124 >gi|332670837|ref|YP_004453845.1| DNA repair protein RecO [Cellulomonas fimi ATCC 484] gi|332339875|gb|AEE46458.1| DNA repair protein RecO [Cellulomonas fimi ATCC 484] Length = 243 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 64/178 (35%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR +G+ + + S R L+ V V + Sbjct: 4 YRDEAIVLRTHKLGEADRIVTLLTRSHGKVRAVGKGVRRTSSRFGSRLEPFMHVDVQLST 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDMLNIFL 118 + ++ + E L ++ + ++ L E E L Y +L + Sbjct: 64 GRSLDIVT-QAETLGAYGRPVCEDYTLYTAGTVMLETAERLVEAEHEPALQQYWLLVGAV 122 Query: 119 NCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + L L G+ T C G + SGGAVC Sbjct: 123 RALAGREHAPGLVLDSYLLRALAVAGWAPSFTDCARCGEPGPHQAFAVASGGAVCGEC 180 >gi|170017071|ref|YP_001727990.1| DNA repair protein RecO [Leuconostoc citreum KM20] gi|238688966|sp|B1MYE4|RECO_LEUCK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169803928|gb|ACA82546.1| DNA repair protein RecO [Leuconostoc citreum KM20] Length = 264 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 4/183 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR-SRLA 63 IIL R Y + ++++ ++T G R + + LQ ++ + Sbjct: 6 GIILSTRQYKDNDLLVRILTETGGLRTFLARGAKKPKSALGSALQPHAVLSFEGAFPKNN 65 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 Q LG + ++ + + + Y + + E E Y+ + L Sbjct: 66 QGLGYINDIQTIKIYQRLIDDIEVNAYAALIASLIDQTFEEGEQLTRWYNQFVLGLQKLD 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I E+ LL +G + + ++G + S K G + + Sbjct: 126 EGLDPQIIANIFEIQLLVPLGVAPNWRQDPISGQSVGQFDYSEKYNGIISDKHYDLDDHR 185 Query: 183 MLV 185 +++ Sbjct: 186 LML 188 >gi|104783261|ref|YP_609759.1| DNA repair protein RecO [Pseudomonas entomophila L48] gi|122402120|sp|Q1I5W0|RECO_PSEE4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|95112248|emb|CAK16975.1| Recombination protein RecO [Pseudomonas entomophila L48] Length = 227 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ +T Q GR +R + + +++ + V R R + Sbjct: 8 PAYVLHSRAYKETSALVDFLTPQ-GRVRAVLRRARG-KGGSLVRPFVPLEVELRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G A L +LF GL L R LP P L++ + L Sbjct: 66 NVGRLD---STGIAAWLHGDALF-SGLYLNELLMRLLPAEAPYPALFEHYTLTLQALAAG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL +G+ L++ Sbjct: 122 RPLEPLLRSFEWRLLDELGYAFSLSQ 147 >gi|68535681|ref|YP_250386.1| DNA repair protein RecO [Corynebacterium jeikeium K411] gi|68263280|emb|CAI36768.1| DNA repair protein RecO [Corynebacterium jeikeium K411] Length = 249 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 9/182 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D+A +L GE ++IL ++TR G + + R + L + V V + Sbjct: 9 FRDEAFVLRTYKLGEADLILVLLTRDNGLIRAVAKGIRKTRSRFGARLDRFSRVDVQIYP 68 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE--LYDMLNIF 117 R N+ + + ++ + +++ Y +++ + + EP ++ +L+ Sbjct: 69 GRSLANVTDAAT--VATYASPIVADVDRFYAGAAMLEMAQVFA-AEPSSAHSIFFLLDAA 125 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L ++ + L L+ G+ L C G P +GGAVC + Sbjct: 126 LQQLTTSALPPVSVADEFVLHGLEVAGWEPSLVDCAQCGKRGPHRAFHPGAGGAVCVTCR 185 Query: 177 LP 178 P Sbjct: 186 PP 187 >gi|297559706|ref|YP_003678680.1| DNA repair protein RecO [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844154|gb|ADH66174.1| DNA repair protein RecO [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 243 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 82/215 (38%), Gaps = 17/215 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L + GE + I+ ++TR+ G + + R + L+ V + + Sbjct: 4 YRDEGVVLRNQKLGEADRIITLLTRRTGLVRAVGKGVRRTRSRFGARLEPCTHVDLQLHA 63 Query: 61 -RLAQNLGEFRFEVLESHCAKLLSSS----LFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 R + E + ++ ++S L++ + E++P L + +L Sbjct: 64 GRTLD--VITQAETVRAYGEAVVSDYSRYTAATAMLETAEKVVSV--EKDPALRQFLLLI 119 Query: 116 IFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L S ++ + L L G+ L +C G + + +GG VC Sbjct: 120 GALRTLGEGSHDSRLVLDAYLLRSLAVAGYAPSLAECARCGSRGEHRAFAVHAGGMVCTV 179 Query: 175 VG-----LPYAEKMLVLPSFLWKEEQTIDADSLKS 204 P + + ++ + L + ++ DA + Sbjct: 180 CRPHGSVHPSPDTLRLMSALLGGDWESADASEDRQ 214 >gi|227833627|ref|YP_002835334.1| DNA repair protein [Corynebacterium aurimucosum ATCC 700975] gi|262184630|ref|ZP_06044051.1| DNA repair protein RecO [Corynebacterium aurimucosum ATCC 700975] gi|227454643|gb|ACP33396.1| DNA repair protein [Corynebacterium aurimucosum ATCC 700975] Length = 238 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 22/189 (11%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQ---------- 49 ++D A+++ +GE + I+ ++TR +G G + + + + LQ Sbjct: 4 NFRDRALVIRTYDFGEADRIIVLLTRHHGLVRGVAKGVRRAKSRFGSRLQLFVNLDVQLY 63 Query: 50 AGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE 109 G + ++ G E E + + L+S L +P Sbjct: 64 PGRNLYTISQADTVDYFGARIIEDYERYTS-------ACAALESAERLAAADAPGDPY-- 114 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 LY+ L+ + + L + + G+ L C P GG Sbjct: 115 LYEACVDVLDKLQHGD-PLMLLDAFLLKAMSHAGWAPSLFDCAQCQRPGPHHAFHPAVGG 173 Query: 170 AVCRSVGLP 178 A C P Sbjct: 174 AACHQCRPP 182 >gi|299144154|ref|ZP_07037234.1| DNA repair protein RecO [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518639|gb|EFI42378.1| DNA repair protein RecO [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 233 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 68/175 (38%), Gaps = 12/175 (6%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + + I+L + YGE + I+ V +++ G+ + + + P++ L + Sbjct: 1 MEKIRTELIVLSEQKYGESSKIIRVFSKEKGKITILAKGALNAKS-PLVSITQLFSHS-N 58 Query: 60 SRLAQNLGEFRFE---VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + + E +L S+ + + L + E E +++D+ Sbjct: 59 AYINKGRSFYYIESATILNSNFKIRKKYETLIISSYILELLDKTFLEGEVNKKIFDLTVK 118 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 L + + I I + EL + +G+ L + + + S K GG V Sbjct: 119 TLKIIQNINYIMPIILAFELKYITFLGYRPSLE------LQEKNNYFSIKDGGIV 167 >gi|258652079|ref|YP_003201235.1| DNA repair protein RecO [Nakamurella multipartita DSM 44233] gi|258555304|gb|ACV78246.1| DNA repair protein RecO [Nakamurella multipartita DSM 44233] Length = 248 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 10/180 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L V GE + I+ ++TR+ G+ + + + + L+ + V + + Sbjct: 4 YRDSAVVLRVTKLGEADRIVSLLTRRTGKVRAVAKGVRRTKSKFGGRLEPFSHVDLQLYA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIFL 118 ++ + E L+ A L + +I L EREP L LY ++ L Sbjct: 64 GRNLDIVT-QAETLDPFGATLAADYSRYTCATAIAETAERLTAEEREPSLRLYLLVVSAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + LL+ + G+ L +C G SGGA+C Sbjct: 123 RALTESGRGPSLIL--DAFLLRAMVLAGWAPALRECARCGSPGPHSAFHVPSGGALCPDC 180 >gi|257055406|ref|YP_003133238.1| DNA repair protein RecO [Saccharomonospora viridis DSM 43017] gi|256585278|gb|ACU96411.1| DNA replication and repair protein RecO [Saccharomonospora viridis DSM 43017] Length = 283 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 74/184 (40%), Gaps = 12/184 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D ++L GE + I+ ++TR++G+ + + + R L+ V V + Sbjct: 4 YRDTGVVLRGHKLGEADRIITLLTRRHGKVRAVAKGVRRTTSRFGARLEPFGHVDVQFYT 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIF 117 R + E +++ ++ +I L E +P L+LY ++ Sbjct: 64 GRTLD--VITQVETVDAFALPIVGDYQRYTAASAITETADRLTAEEGQPALKLYLLVVGA 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + + + LL+++ G+ +T+C G + ++GG++C Sbjct: 122 LRALAEGRRDASLVL--DAFLLRSMAFAGWAPAITECARCGQPGPHGAFNVQAGGSLCSR 179 Query: 175 VGLP 178 +P Sbjct: 180 CRVP 183 >gi|320160272|ref|YP_004173496.1| DNA repair protein RecO [Anaerolinea thermophila UNI-1] gi|319994125|dbj|BAJ62896.1| DNA repair protein RecO [Anaerolinea thermophila UNI-1] Length = 258 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 11/178 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 +A++L +GE + +L + TR+ G+ + + R L+ V+V LA Sbjct: 11 EAVVLRHSDWGEADRVLVLFTREQGKVRALAKGARKMLSRKAGHLEPFTHVKVL----LA 66 Query: 64 QNLGEF---RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 Q + + E L + + Y I L RF + L+ +L L+ Sbjct: 67 QGKDFWIVTQAETLNAFLSIRADLLRTAYAALVIELLDRFTSDDGENPALFQLLVHTLSR 126 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVG 176 L LL GF L C+ G + + + + GG +C Sbjct: 127 IATLEDPFIAVQYYHLRLLDLTGFRPQLFTCLRCGKEIQPENQFFDYQEGGVICPRCA 184 >gi|56708286|ref|YP_170182.1| DNA repair protein recO [Francisella tularensis subsp. tularensis SCHU S4] gi|110670757|ref|YP_667314.1| DNA repair protein recO [Francisella tularensis subsp. tularensis FSC198] gi|224457407|ref|ZP_03665880.1| DNA repair protein recO [Francisella tularensis subsp. tularensis MA00-2987] gi|254370770|ref|ZP_04986775.1| DNA repair protein recO [Francisella tularensis subsp. tularensis FSC033] gi|254875107|ref|ZP_05247817.1| DNA repair protein recO [Francisella tularensis subsp. tularensis MA00-2987] gi|54113119|gb|AAV29193.1| NT02FT1265 [synthetic construct] gi|56604778|emb|CAG45857.1| DNA repair protein recO [Francisella tularensis subsp. tularensis SCHU S4] gi|110321090|emb|CAL09240.1| DNA repair protein recO [Francisella tularensis subsp. tularensis FSC198] gi|151569013|gb|EDN34667.1| DNA repair protein recO [Francisella tularensis subsp. tularensis FSC033] gi|254841106|gb|EET19542.1| DNA repair protein recO [Francisella tularensis subsp. tularensis MA00-2987] gi|282159515|gb|ADA78906.1| DNA repair protein recO [Francisella tularensis subsp. tularensis NE061598] Length = 232 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 15/145 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ V TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILYQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQP--LVKLRGQINLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 L + E +ES K + L L + ++ L + E + L+D + L Sbjct: 64 GLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEED---VLFDKYDFILRNID 120 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGL 146 + + ++ EL LL ++G G+ Sbjct: 121 EAN--YRHLLRMFELELLNSLGQGI 143 >gi|208779892|ref|ZP_03247236.1| DNA repair protein RecO [Francisella novicida FTG] gi|208744347|gb|EDZ90647.1| DNA repair protein RecO [Francisella novicida FTG] Length = 232 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 13/144 (9%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ V TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQP--LVKLRGQINLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 +L + E +ES K + L L + ++ L + E + L+D + L Sbjct: 64 SLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEED---VLFDKYDFILRNID 120 Query: 123 IPSVIGKIFVQIELMLLKNIGFGL 146 + + EL LL ++G G+ Sbjct: 121 EANYRY-LLRMFELELLNSLGQGI 143 >gi|270159973|ref|ZP_06188629.1| DNA repair protein RecO [Legionella longbeachae D-4968] gi|289165283|ref|YP_003455421.1| DNA repair protein recO [Legionella longbeachae NSW150] gi|269988312|gb|EEZ94567.1| DNA repair protein RecO [Legionella longbeachae D-4968] gi|288858456|emb|CBJ12334.1| DNA repair protein recO [Legionella longbeachae NSW150] Length = 229 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 11/165 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +A +L + G+ + + +TR++G + G++ + Q +LQA + V+ Sbjct: 1 MTRTVEAWVLHKQWSGDTSARVSFLTREFGIVQCLYKGGRTPKKQALLQAFTPLWVSIAE 60 Query: 61 RLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + + +ES + L L + GL L+ L L++ LN Sbjct: 61 RYDR----YYIQSIESISSTLPLIGNALFAGLYINEILYYALAPNSSDSMLFEAYLFTLN 116 Query: 120 CH---KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 K V+ + + E LL+ G+ LT+ T++L+ Sbjct: 117 KLVSTKDRLVLEALLRRFEWTLLRTCGYSFSLTQEA---RTENLI 158 >gi|332523261|ref|ZP_08399513.1| DNA repair protein RecO [Streptococcus porcinus str. Jelinkova 176] gi|332314525|gb|EGJ27510.1| DNA repair protein RecO [Streptococcus porcinus str. Jelinkova 176] Length = 257 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 72/186 (38%), Gaps = 2/186 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L ++Y E + ++++ T G+ + F+++ ++ ++Q + + + L Sbjct: 8 ALVLYNKNYREDDKLVKLFTETAGKRMFFIKHASKSKLASVIQPLTIADFILKI-NEKGL 66 Query: 67 GEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + ++++ Y + + +P+ E +L+ L+ + Sbjct: 67 SYIDDYNDVQTYPRINQDLYRLAYATYVMSLVDAAIPDNESDSQLFAFTRKTLDLMEEGL 126 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + E+ +L+ G L+ +CV S K G +C + + + Sbjct: 127 DYEILTNIFEIQILERFGVRLNFHECVFCHRVGLPFDFSHKYSGPLCPNHLQEDTHRSHL 186 Query: 186 LPSFLW 191 P+ L+ Sbjct: 187 DPNVLY 192 >gi|226323778|ref|ZP_03799296.1| hypothetical protein COPCOM_01553 [Coprococcus comes ATCC 27758] gi|225207962|gb|EEG90316.1| hypothetical protein COPCOM_01553 [Coprococcus comes ATCC 27758] Length = 280 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 81/233 (34%), Gaps = 30/233 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRV-NWRSRLA 63 +IL V GE + + ++T++ G+ F + + + + N + + R + Sbjct: 39 GMILSVAPIGEYDKRVVILTKEKGKISAFAKGARRPNSPLAGACTPCNFGKFMLYEGRNS 98 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-----PEREPCLELYDMLNIFL 118 L E ++ A+L + Y + F ERE LY + + Sbjct: 99 NTLQSAEIE---NYFAELRTDVEAAYYAFYFLEFADFYTREANDEREMLKLLYQTMRVL- 154 Query: 119 NCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 +I V+ EL L G G + +CV G + S K GG VC G Sbjct: 155 ----TKKIIPFELVRYIFELKALSVSGEGPQVFQCVRCGNRERPCVFSVKEGGLVCSECG 210 Query: 177 LPYAEKM------LVLPSFLWKE------EQTIDADSLKSAFQLTDYFLNKYA 217 + M L F+ T+ + LK +L +L+ Y Sbjct: 211 QNVYDGMRLNTSTLYAMQFIVGTPVEKLYTFTLSDEVLKELGKLMGRYLDVYV 263 >gi|167035365|ref|YP_001670596.1| DNA repair protein RecO [Pseudomonas putida GB-1] gi|189039661|sp|B0KV25|RECO_PSEPG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166861853|gb|ABZ00261.1| DNA repair protein RecO [Pseudomonas putida GB-1] Length = 227 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 7/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ T Q GR +R +S + +++ + V R R + Sbjct: 8 PAYVLHSRAYKETSALVDFFTPQ-GRVRAVLRRARS-KGGSLVRPFVPLEVELRGRGELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G + + A L GL L R LP P L++ + L Sbjct: 66 NVGG----MDSAGTAAWLHGDALFSGLYLNELLMRLLPAEAPFPTLFEHYTLTLQALGAG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + E LL +G+ L + Sbjct: 122 RPLEPLLRSFEWRLLDELGYAFSLQQ 147 >gi|110834490|ref|YP_693349.1| DNA repair protein RecO [Alcanivorax borkumensis SK2] gi|110647601|emb|CAL17077.1| DNA repair protein RecO [Alcanivorax borkumensis SK2] Length = 225 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 8/145 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ R + ++ +++ GR VR G R P+L + V + Sbjct: 11 AWLIHRRPFRNTSLTVDLFLPNLGRVGAVVRGG---RKDPLLAPFTPLWVELKPSGD--- 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + E +LL S LY G L R L +P ++ + L+ Sbjct: 65 -MYSLRACEPRGNRLLLSGKALYCGFYLNELLTRLLHRDDPNPAIWPLYEQALSDLLTDI 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + Q EL L+ IG+G+ L + Sbjct: 124 PLDITLRQFELAALEEIGYGIALDQ 148 >gi|323359850|ref|YP_004226246.1| recombinational DNA repair protein [Microbacterium testaceum StLB037] gi|323276221|dbj|BAJ76366.1| recombinational DNA repair protein [Microbacterium testaceum StLB037] Length = 242 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 22/186 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D+ ++L GE + IL +++R+ G+ + + S + L+ + V ++ Sbjct: 4 YRDEVVVLRTHKLGEADRILTLLSRRNGKIRAVAKGVRRTSSKFGSRLEPFMVADVQLFK 63 Query: 60 SRL------AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R A++LG + E++ + ++V L E E + Y + Sbjct: 64 GRNLDIVQQAESLGSYGAEIVADYDVYT--------TASAMVETADRLNEAEATPQQYLL 115 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + + LL+ + G+ LT+C G D + + GG Sbjct: 116 LVGGLRSLARGEHSERSVL--DSYLLRAMALSGWAPGLTECARCGTVGDHPYFLAQLGGV 173 Query: 171 VCRSVG 176 VC + Sbjct: 174 VCSTCA 179 >gi|227524440|ref|ZP_03954489.1| recombination protein O [Lactobacillus hilgardii ATCC 8290] gi|227088399|gb|EEI23711.1| recombination protein O [Lactobacillus hilgardii ATCC 8290] Length = 256 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 4/171 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 I+L ++Y E++++++ +TR++G+ + V + RM+ + + Sbjct: 13 HGILLYTKAYRERDLLIKFLTREFGKKMFLVHGAKRPKFRMRAAILPFTY-GAYFGDLKD 71 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L ++ ++ + Y + + + + YD L I L+ Sbjct: 72 DGLSYINNYKSIDHFQGITADITKNAYATYIMSLIDLAFQDSIAIPKWYDQLMIGLSLID 131 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 I E+ LL G D C + S GG +C+ Sbjct: 132 DGFDEEIITNIFEIQLLSAFGVEPDWVDCAICHRRDLPFDYSEAYGGLLCQ 182 >gi|227513296|ref|ZP_03943345.1| recombination protein O [Lactobacillus buchneri ATCC 11577] gi|227083497|gb|EEI18809.1| recombination protein O [Lactobacillus buchneri ATCC 11577] Length = 256 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 4/171 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 I+L ++Y E++++++ +TR++G+ + V + RM+ + + Sbjct: 13 HGILLYTKAYRERDLLIKFLTREFGKKMFLVHGAKRPKFRMRAAILPFTY-GAYFGDLKD 71 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L ++ ++ + Y + + + + YD L I L+ Sbjct: 72 DGLSYINNYKSIDHFQGITADITKNAYATYIMSLIDLAFQDSIAIPKWYDQLMIGLSLID 131 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 I E+ LL G D C + S GG +C+ Sbjct: 132 DGFDEEIITNIFEIQLLSAFGVEPDWVDCAICHRRDLPFDYSEAYGGLLCQ 182 >gi|330686117|gb|EGG97738.1| DNA repair protein RecO [Staphylococcus epidermidis VCU121] Length = 252 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 72/195 (36%), Gaps = 17/195 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ + R ++ +++ LQA G Sbjct: 1 MLMKQKGIIIKSVEYGESDKIITILNEYGSKVPLMAR--RAKKIKSGLQAHTQMFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H L + + R + E E YD Sbjct: 59 IYNKWRG-----MGTLNCVDVINQHYELQLDLYESSFATLCAETIDRSMEENEISKYNYD 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGA 170 +LN L + + + L + GF KCV++G T L+ S K GA Sbjct: 114 LLNFVLTKISSGQSAQLMSIIVLLKCMNKFGFSALFNKCVISGNTDQSKLVGYSFKFDGA 173 Query: 171 VCRSVGLPYAEKMLV 185 + +SV + + Sbjct: 174 ISQSVAYQDPHALQL 188 >gi|85712958|ref|ZP_01043997.1| Recombinational DNA repair protein, RecO, RecF pathway [Idiomarina baltica OS145] gi|85693196|gb|EAQ31155.1| Recombinational DNA repair protein, RecO, RecF pathway [Idiomarina baltica OS145] Length = 228 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 5/140 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E +++++ + + GR + + + +LQ + V W R Sbjct: 3 PAFVLHRWDYQETSLLVDCFSLEDGRVRLLAKGAKRKTSSWKGVLQPFIPLNVQWGGRGE 62 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L SH +L S L+ G L R LP+ L++ L Sbjct: 63 --LKTLTHAEAMSHNYELRSDFLY-SGFYINELLQRVLPQHVAVPSLFECYPQLLQRLAD 119 Query: 124 PSVIGKIFVQIELMLLKNIG 143 I E LL +G Sbjct: 120 KQPIETTLRWFEWQLLDELG 139 >gi|220934268|ref|YP_002513167.1| DNA repair protein RecO [Thioalkalivibrio sp. HL-EbGR7] gi|219995578|gb|ACL72180.1| DNA repair protein RecO [Thioalkalivibrio sp. HL-EbGR7] Length = 233 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 10/142 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IL VR Y + + IL+++T GR R +S + + + W+ R Sbjct: 8 GFILHVRPYRDNSHILDLLTEAEGRTACLFRG-RSQKARSF----ARYELAWQGRGE--- 59 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 +LE A +L++ G + LP + P ++ + P Sbjct: 60 -LKTLSLLEEQSAVVLAAQRLACGFYVNELALKLLPRQIPLEGFFEDYAHTVAALARPDE 118 Query: 127 IGKIFVQ-IELMLLKNIGFGLD 147 + ++ E LL +G GL+ Sbjct: 119 DLEPLLRGYERSLLHYLGEGLE 140 >gi|302528829|ref|ZP_07281171.1| DNA repair protein RecO [Streptomyces sp. AA4] gi|302437724|gb|EFL09540.1| DNA repair protein RecO [Streptomyces sp. AA4] Length = 258 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 8/159 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D ++L GE + I+ ++T+++G+ + + S R L+ V V + Sbjct: 5 YRDTGVVLRTHKLGEADRIVTLLTKRHGKVRAVAKGVRRTSSRFGARLEPFGHVDVQFYP 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIF 117 R + E +++ L++ +I L E EP L+LY ++ Sbjct: 65 GRSLD--VITQVETVDAFALPLVADYQRYTAASAIAETADRLSAEEGEPVLKLYLLVVGA 122 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG 155 L + + L + G+ +T+C G Sbjct: 123 LRALAGGQRDASLVLDAFFLRAMAYAGWAPAITECARCG 161 >gi|311741367|ref|ZP_07715191.1| recombination protein O [Corynebacterium pseudogenitalium ATCC 33035] gi|311303537|gb|EFQ79616.1| recombination protein O [Corynebacterium pseudogenitalium ATCC 33035] Length = 238 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 20/188 (10%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWR 59 ++D A+++ +GE + ++ ++TR +G + + + + LQ + V Sbjct: 4 NYRDRAVVIRTYDFGEADRVIVLLTRDHGLVRAVAKGVRRAKSRFGSRLQLFVNLDVQLY 63 Query: 60 SRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-----EPC-LELYD 112 + +NL + + ++ A+L+ + + ER LYD Sbjct: 64 --VGKNLATISQADTVDYFGARLIEDYER---YTAACAVLES-AERLAFADAAHDPYLYD 117 Query: 113 MLNIFLNCHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 + L + P++ F+ L + + G+ L C P GGA Sbjct: 118 SVTATLEQLQTADPTMALDAFL---LQAMAHAGWAPSLFNCAQCNRPGPHHAFHPAVGGA 174 Query: 171 VCRSVGLP 178 C P Sbjct: 175 ACHECRPP 182 >gi|95929740|ref|ZP_01312481.1| DNA repair protein RecO [Desulfuromonas acetoxidans DSM 684] gi|95134036|gb|EAT15694.1| DNA repair protein RecO [Desulfuromonas acetoxidans DSM 684] Length = 251 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 5/151 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L YGE + I+ ++TR +G F RN +S R + L + +R+ W++R Sbjct: 7 EAIVLRCTDYGEADRIVTLLTRDHGICGAFARNARSSRRRFGGALHPFSRLRITWQTRRR 66 Query: 64 QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCH 121 L + E+L+ L+++ + L L PE + E+YD+L FL Sbjct: 67 GGLPQLAEVELLDG-AHGLMTNLDGMALAAYGCELIMALWPEEQAIPEVYDLLRSFLPAA 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 + + +EL LL G L C Sbjct: 126 ASSGAGETLRLLMELRLLDAAGLLPHLGHCG 156 >gi|298346620|ref|YP_003719307.1| DNA repair protein RecO [Mobiluncus curtisii ATCC 43063] gi|298236681|gb|ADI67813.1| DNA repair protein RecO [Mobiluncus curtisii ATCC 43063] Length = 243 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 6/175 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR- 59 ++D A++L + GE + I+ ++T ++G R + R+ L+ V + R Sbjct: 4 FRDAAVVLRTQDLGEADRIVTLLTEKHGLLRCVGRGVRKTTSRLGARLEPFGTVDIQIRW 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFL 118 + + E + E+L + L + +V L E Y + N L Sbjct: 64 GKSNLHHIE-QVEILAPYGRSLANDYARYTAANLMVETLERLTEDSWTNERYYHLTNGAL 122 Query: 119 NCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + + L L+ G+ C G + +P GGA+C Sbjct: 123 HALATGRHEPSLILDSYLLRLMSLAGWAASCWDCASCGARGPHEYFNPSGGGAMC 177 >gi|54023419|ref|YP_117661.1| DNA repair protein RecO [Nocardia farcinica IFM 10152] gi|61214801|sp|Q5YZU4|RECO_NOCFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54014927|dbj|BAD56297.1| putative DNA repair protein [Nocardia farcinica IFM 10152] Length = 256 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 24/201 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR- 59 ++D+A+++ GE + I+ ++TRQ+G + + R + L+ + + V Sbjct: 4 YRDEAVVVRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSRFGARLEPFSYIDVQLHP 63 Query: 60 SR-LAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRF---LP--EREPCLELYD 112 R L E S A ++ YG + + L ER P +L+ Sbjct: 64 GRNLDTVTQVHTVE---SFAADIIDD----YGRYTTACAILETAERLAGEERAPAPKLHA 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + L ++ + + LL+ + G+ L +C +GG Sbjct: 117 LTASALRAIAAKQRPHELVL--DAYLLRAMRFAGWAPALDECAKCATPGPHRAFHVAAGG 174 Query: 170 AVCRSVGLPYAEKMLVLPSFL 190 AVC P A P L Sbjct: 175 AVCVHCRPPGAAT--PAPGVL 193 >gi|271963862|ref|YP_003338058.1| DNA replication and repair protein RecO [Streptosporangium roseum DSM 43021] gi|270507037|gb|ACZ85315.1| DNA replication and repair protein RecO [Streptosporangium roseum DSM 43021] Length = 245 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 8/156 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR- 59 ++DD I+L GE + I+ V+TR+ G+ G + + R L+ V + Sbjct: 4 YRDDGIVLRTHKLGEADRIVTVLTRRTGKIRGVAKGVRRTMSRFGARLEPFTHVDLQLHT 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIF 117 R + E + + L++ + G + R L E+EP L + +L Sbjct: 64 GRTLD--VITQAETIRPYGEALVTDYPRYTAGSAMLETADRLTLGEKEPSLRQFLLLVGG 121 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCV 152 L ++ + L L G+ L C Sbjct: 122 LRTLGSGEHEPRLVLDAYFLRSLAVAGYAPALEACA 157 >gi|227510289|ref|ZP_03940338.1| recombination protein O [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189941|gb|EEI70008.1| recombination protein O [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 256 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 10/174 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 I+L ++Y E++++++ +TR++G+ + V + RM+ + + Sbjct: 13 HGILLYTKAYRERDLLIKFLTREFGKKMFLVHGAKRPKFRMRAAILPFTY-GAYFGDLKD 71 Query: 64 QNLGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 L R + + A + ++ Y + + + + YD L I L+ Sbjct: 72 DGLSYINNYKRIDHFQGITADITKNAYATYIMSL---IDLAFQDSIAIPKWYDQLMIGLS 128 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 I E+ LL G D C + S GG +C+ Sbjct: 129 LIDDGFDEEIITNIFEIQLLSAFGVEPDWVDCAICHRRDLPFDYSEAYGGLLCQ 182 >gi|94264354|ref|ZP_01288146.1| Recombination protein O, RecO [delta proteobacterium MLMS-1] gi|93455248|gb|EAT05461.1| Recombination protein O, RecO [delta proteobacterium MLMS-1] Length = 255 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 10/182 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRSR 61 + A++L V SYGE + I+ G+ G + R++ + L+ +L+ + + Sbjct: 5 RTSAVVLAVSSYGESDKIVTFYGHDTGKLSGIAKGANRSRIRFVNKLELFSLLELYYEPG 64 Query: 62 LAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL-- 118 + L + E+ + + + RF E +P ++ +L L Sbjct: 65 RSSGLVRIDQAELSQPFATIRRDYHRYSAAALAGELAARFSGEGDPDGRIFQLLLWVLHT 124 Query: 119 --NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL---WVSPKSGGAVCR 173 +C + + + E LL +G+ DL+ C G S GG +C Sbjct: 125 IADCTRPTLELPPCLIFFETKLLALLGYAPDLSGCRRCGTLAASARPYHFSLGQGGLLCA 184 Query: 174 SV 175 S Sbjct: 185 SC 186 >gi|81428489|ref|YP_395489.1| DNA repair protein O [Lactobacillus sakei subsp. sakei 23K] gi|90103522|sp|Q38XA1|RECO_LACSS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78610131|emb|CAI55180.1| DNA repair protein O [Lactobacillus sakei subsp. sakei 23K] Length = 272 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------PILQA--GNLVRVNW 58 +++ ++Y EK+++++++T ++G+ + ++R + + P QA G +R Sbjct: 11 GLVMYRKNYKEKDMLVKILTDRFGKKMFYLRGANKPKFRLSAAILPFTQAEYGGDIR--- 67 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNI 116 L V + + +S LFL Y + + P+ EP YD + Sbjct: 68 ----DDGLSFLN-NVKSATQFQTISQDLFLNAYATYILNLIDVGFPDSEPLGIWYDKVEQ 122 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW-VSPKSGGAVCR 173 LN I IE+ LL+ G L C V G T DL + S GG +C+ Sbjct: 123 ALNLIDEGFDAAMITHIIEIQLLQVFGVQPQLQGCAVCGRT-DLAFDYSESYGGLLCQ 179 >gi|256375393|ref|YP_003099053.1| DNA repair protein RecO [Actinosynnema mirum DSM 43827] gi|255919696|gb|ACU35207.1| DNA repair protein RecO [Actinosynnema mirum DSM 43827] Length = 250 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 12/184 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR- 59 ++D ++L V+ GE + I+ ++T+++G+ + + S R L+ V + Sbjct: 5 YRDTGVVLRVQKLGEADRIITLLTQRHGKLRAVAKGVRRTSSRFGARLEPFGHVDAQFHP 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDMLNIF 117 R + E +++ L+ G + R E P L LY ++ Sbjct: 65 GRTLD--VITQVETIDAFGVVLVDDYQRYTAGCAVLETADRLTSEEGAPALRLYLLVTGA 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + + + LL+ + G+ + +C G + ++GG VC + Sbjct: 123 LRALADGRRDPSLLL--DAFLLRAMAFAGWAPAVGECARCGEPGPHRSFNVQAGGVVCAN 180 Query: 175 VGLP 178 P Sbjct: 181 CRPP 184 >gi|88855029|ref|ZP_01129694.1| DNA repair protein RecO [marine actinobacterium PHSC20C1] gi|88815557|gb|EAR25414.1| DNA repair protein RecO [marine actinobacterium PHSC20C1] Length = 242 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 72/205 (35%), Gaps = 46/205 (22%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------SHRMQPI----LQ--A 50 ++D+A++L GE + I+ +++R++G+ + + R++P +Q Sbjct: 4 YRDEAVVLRTHKLGEADRIVTMLSREHGKIRAVAKGVRRTASKFGARLEPFMVADIQCYI 63 Query: 51 GNLVRVNWRSRLAQNLGEF----RFEVLESHCAKLL--------SSSLFLYGLQSIVPLF 98 G + + ++ ++LG + + A ++ L +V Sbjct: 64 GRSLDIIQQA---ESLGSYGSDITADYASYTAASVMVETADKVTDDDGSLQQYLLLVGAL 120 Query: 99 RFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 R L RE L L+ +L L L G+ C VTG Sbjct: 121 RSLARREHNPSL--TLDSYL-----------------LRSLSIAGWAPSFVDCAVTGAPG 161 Query: 159 DLLWVSPKSGGAVCRSVGLPYAEKM 183 + GG V V P A ++ Sbjct: 162 PHSVFVAQMGGVVSDEVAPPGAPRL 186 >gi|86566841|gb|ABD10650.1| DNA replication and repair protein RecO [Frankia sp. CcI3] Length = 289 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 10/180 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L E + I+ V+TR+ GR + + S R L+ G V + S Sbjct: 50 YRDEGVVLRTAPLAEADRIITVLTRRTGRVRAVAKGVRKTSSRFGSRLEPGTYVDLLLHS 109 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSS----LFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 A + + +++ + A + L++ L ER+P L L+ +L Sbjct: 110 GRALDTVT-QADIISPYGATIAVDYPRYTAAAVMLETAERLTSE--ERQPALRLFLLLVG 166 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + + L L G+G+ L C G L +S GG VC Sbjct: 167 GLRTLAGDERPPALVLDAFLLRALAVSGYGMALDHCARCGGPGLHLSLSVPGGGVVCPQC 226 >gi|314936313|ref|ZP_07843660.1| DNA repair protein RecO [Staphylococcus hominis subsp. hominis C80] gi|313654932|gb|EFS18677.1| DNA repair protein RecO [Staphylococcus hominis subsp. hominis C80] Length = 249 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 17/194 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG-RHLGFVRNGQSHR--MQPILQA---GNLV 54 M + II+ YGE + I+ ++ ++G + VR + + +Q Q G + Sbjct: 1 MLEKQKGIIIKSVDYGESDKIITIL-NEHGAKIPIMVRRAKKSKTGLQAHTQLFVYGLFI 59 Query: 55 RVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 W+ +G +V+ + L Y + + R L E L Y + Sbjct: 60 YNKWKG-----MGTLSSIDVINQYYQLRLDIFDSSYATLCVEAIDRSLEPDEVSLYHYKL 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAV 171 L LN + + + + L + GF C +TG T L+ S K G + Sbjct: 115 LEFVLNKISEGNSAQLMSIIVLLKCMNKFGFDAFFNYCAITGDTDQSKLIAYSFKYDGTI 174 Query: 172 CRSV--GLPYAEKM 183 +V PYA K+ Sbjct: 175 SETVLNNDPYALKL 188 >gi|114564091|ref|YP_751605.1| DNA repair protein RecO [Shewanella frigidimarina NCIMB 400] gi|114335384|gb|ABI72766.1| DNA repair protein RecO [Shewanella frigidimarina NCIMB 400] Length = 240 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 6/141 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLA-Q 64 +L R + E ++I+ ++ GR R G R ++ ILQ + + + ++ + Sbjct: 7 GYVLHHRQFRESSVIVNLLVEGVGRVDAITRVGSGKRSIKSILQPFQPLIIQFSAKSEAR 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELY-DMLNIFLNCHK 122 NLG +ES + S LY G L R L L+ D L K Sbjct: 67 NLGLKNITQIESAAPAMPLSGNSLYSGFYLNEILVRLLSVDHQAEGLFLDYHRALLALAK 126 Query: 123 IPSVIGKIFVQIELMLLKNIG 143 E+ LL +G Sbjct: 127 Q--FCSSHLRYFEMALLLELG 145 >gi|312881716|ref|ZP_07741493.1| DNA repair protein RecO [Vibrio caribbenthicus ATCC BAA-2122] gi|309370606|gb|EFP98081.1| DNA repair protein RecO [Vibrio caribbenthicus ATCC BAA-2122] Length = 208 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 17/133 (12%) Query: 35 FVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ 92 + +S R ++ LQ + + W G + A+ +S L L G+ Sbjct: 4 LSKGARSKRSSLKGALQPFTPLLLKWSGN-----GALK----TLREAEPISLGLPLSGIN 54 Query: 93 SIVP------LFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGL 146 + R L + P L+ L + + EL LL +G+G+ Sbjct: 55 LYSGFYINELIGRVLAQEVPMPGLFHDYLHALTELAQSNNPEPALRRFELSLLAAMGYGV 114 Query: 147 DLTKCVVTGVTQD 159 D C +G D Sbjct: 115 DFLHCAGSGEMVD 127 >gi|330718561|ref|ZP_08313161.1| DNA repair protein RecO [Leuconostoc fallax KCTC 3537] Length = 263 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 10/185 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG--NLVRVNWRSRLA 63 I+L R Y + ++++ V+T G R + + + L AG + L Sbjct: 5 HGIVLYTRQYKDNDLLVRVLTETEGLRTFLARGAKKQKSK--LSAGVQTYTLSLFEGALP 62 Query: 64 QNLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFL 118 + G + + + +L+ + I L + EP Y I L Sbjct: 63 KQNGSLGYINDVQDTKQYT-RLIKDIEANAYVAVIASLLDAAFEDGEPITHWYQQFVIAL 121 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + I E+ LL +G + + G + S K G + + Sbjct: 122 DKINNGADPQIITNIFEVQLLVPLGVAPNWRADPIDGNQVGIFDYSEKYNGIISENHFGL 181 Query: 179 YAEKM 183 ++ Sbjct: 182 DEHRL 186 >gi|324998272|ref|ZP_08119384.1| DNA repair protein RecO [Pseudonocardia sp. P1] Length = 266 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 74/185 (40%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D ++L V+ GE + I+ ++T+Q G+ + + R + L+ N V V + Sbjct: 5 YRDTGVVLRVQKLGEADRIVTMLTKQRGKIRVVAKGVRRTRSRWGARLEPFNHVDVQCYT 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDML--- 114 R + + +++ +++ +I+ L E EP L +Y +L Sbjct: 65 GRTLD--VVTQAQTVDAFAPAVVADWSAYSCGCAILETADRLVSEEGEPALRVYLLLLGA 122 Query: 115 -NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 + + P+++ F+ L + + G+ L++C + GG VC Sbjct: 123 TRALADGVREPALVLDAFL---LRAMSHAGWAPSLSECARCATPGPHRAFTVAGGGMVCP 179 Query: 174 SVGLP 178 P Sbjct: 180 RCRPP 184 >gi|170720261|ref|YP_001747949.1| DNA repair protein RecO [Pseudomonas putida W619] gi|229485560|sp|B1J4E2|RECO_PSEPW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169758264|gb|ACA71580.1| DNA repair protein RecO [Pseudomonas putida W619] Length = 227 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 7/145 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 A +L R+Y E + +++ T Q GR +R + + +++ + V R R + Sbjct: 8 PAYVLHSRAYKETSALVDFFTPQ-GRVRAVLRRARG-KGGSLVRPFVPLEVELRGRSELK 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 N+G + A L GL L R LP P EL++ + L Sbjct: 66 NVGR----LDSMGIAAWLHGDALFSGLYLNELLMRLLPAEAPQPELFEHYALTLQALAAG 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLT 149 + + E LL+++G+ L Sbjct: 122 RPLEPLLRSFEWRLLEDLGYAFALD 146 >gi|229820258|ref|YP_002881784.1| DNA repair protein RecO [Beutenbergia cavernae DSM 12333] gi|259563675|sp|C5C4P4|RECO_BEUC1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229566171|gb|ACQ80022.1| DNA repair protein RecO [Beutenbergia cavernae DSM 12333] Length = 243 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 12/181 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D+A++L GE + IL ++TR +G+ + + S + L+ ++ + + Sbjct: 4 YRDEAVVLRTHKLGEADRILTLLTRHHGQVRAVAKGVRRTSSKFGARLEPFGVIDLQLYA 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSL----FLYGLQSIVPLFRFLPEREPCLELYDMLN 115 R + + L H ++ +++ L EREP + Y +L Sbjct: 64 GRSLD--VVTQVDTLAPHGRSIVGDYALYTTATAMVETAERLTEI--EREPATQQYLLLV 119 Query: 116 IFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + + + L L G+ T C S GGA+C++ Sbjct: 120 GALRALAERAHAPTLVLDSYLLRSLAVAGWAPTFTDCARCSREGPHRAFSAPMGGALCQA 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|291299550|ref|YP_003510828.1| DNA repair protein RecO [Stackebrandtia nassauensis DSM 44728] gi|290568770|gb|ADD41735.1| DNA repair protein RecO [Stackebrandtia nassauensis DSM 44728] Length = 251 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 20/185 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L V GE + I+ ++ R GR + + S + L + V Sbjct: 6 FRDDAVVLRVHKLGEADHIVSMLGRNSGRMRAVAKGVRRTSSKFGARLAPFGHIDVQ--- 62 Query: 61 RLAQNLGEFRF------EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDM 113 L + ++ + + S + R PE EP L ++ + Sbjct: 63 -LIEGRNLHTVTQVVGIDLYGRNIVRDYQSYTAACAISETAE--RLTPEEHEPSLRIFQL 119 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + + + LL+ +G LT+C + G + S +GG Sbjct: 120 TLGALRALSDAEHAATLVL--DAYLLRTMGVSGWAPALTECALCGAAGEHRAFSVAAGGC 177 Query: 171 VCRSV 175 VCRS Sbjct: 178 VCRSC 182 >gi|241895550|ref|ZP_04782846.1| recombination protein O [Weissella paramesenteroides ATCC 33313] gi|241871128|gb|EER74879.1| recombination protein O [Weissella paramesenteroides ATCC 33313] Length = 263 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 75/180 (41%), Gaps = 2/180 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL-AQ 64 DAI++ R + EK+++++++TRQ G+ + ++R+G+S R Q + L + + + Sbjct: 6 DAIVMYQRDHKEKDLMVKMLTRQAGKRMFYIRHGKSQRYQFSAEIQPLRTATFEGTINST 65 Query: 65 NLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + L++ L Y + + + +P YD++ LN Sbjct: 66 GMSFINDVKATKDTSFLMTDIVLNAYMTYILGLIDAAFVDNQPIPRWYDLVIEALNKLNS 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I E+ LL G KCV+ G + L S + G +C+ ++ Sbjct: 126 GLDPQGIANYFEIQLLPVFGMQPTWGKCVICGRSDLPLDFSEEFNGTLCQQHWSADEHRL 185 >gi|255323740|ref|ZP_05364868.1| DNA repair protein RecO [Corynebacterium tuberculostearicum SK141] gi|255299230|gb|EET78519.1| DNA repair protein RecO [Corynebacterium tuberculostearicum SK141] Length = 238 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 68/188 (36%), Gaps = 20/188 (10%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWR 59 ++D A+++ +GE + ++ ++TR +G + + + + LQ + V Sbjct: 4 NYRDRAVVIRTYDFGEADRVIVLLTRDHGLVRAVAKGVRRAKSRFGSRLQLFVNLDVQLY 63 Query: 60 SRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-----EPC-LELYD 112 + +NL + + ++ A+L+ + + ER LY+ Sbjct: 64 --VGKNLATISQADTVDYFGARLIEDYER---YTAACAVLES-AERLAFADAAHDPYLYE 117 Query: 113 MLNIFLNCHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 + L + P++ F+ L + + G+ L C P +GGA Sbjct: 118 SVTATLEQLQTADPTMALDAFL---LQAMAHAGWAPSLFNCAQCNRPGPHHAFHPAAGGA 174 Query: 171 VCRSVGLP 178 C P Sbjct: 175 ACHECRPP 182 >gi|304389667|ref|ZP_07371627.1| recombination protein O [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656965|ref|ZP_07909850.1| DNA repair protein RecO [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327071|gb|EFL94309.1| recombination protein O [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492357|gb|EFU81963.1| DNA repair protein RecO [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 243 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 6/175 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR- 59 ++D A++L + GE + I+ ++T ++G R + R+ L+ V + R Sbjct: 4 FRDAAVVLRTQDLGEADRIVTLLTEKHGLLRCVGRGVRKTTSRLGARLEPFGTVDIQIRW 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFL 118 + + E + E+L + L + +V L E Y + L Sbjct: 64 GKSNLHHIE-QVEILAPYGRSLANDYARYTAANLMVETLERLTEDSWTNERYYHLTIGAL 122 Query: 119 NCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + + L L+ G+ C G + +P GGA+C Sbjct: 123 HALATGRHEPSLILDSYLLRLMSLAGWAASCWDCASCGARGPHEYFNPSGGGAMC 177 >gi|289705003|ref|ZP_06501416.1| DNA repair protein RecO [Micrococcus luteus SK58] gi|289558262|gb|EFD51540.1| DNA repair protein RecO [Micrococcus luteus SK58] Length = 273 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 64/185 (34%), Gaps = 13/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++ +AI+L GE + I+E +T ++G + + S R+ +++ + R Sbjct: 21 FRTEAIVLRTHRLGEADRIIEALTPEHGLVRAVAKGVRKTSSRLGSVVEPFMHSTLQLAR 80 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP------EREPCLELYDM 113 R + + ++L + A L + +I +P R + Sbjct: 81 GRGELHTVS-QAQLLHPYAAMLAADYDAYTVAGAIAEAVERVPAVDDDGRRAQYRLFHGA 139 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L P +I F+ L L G+ +C G + GGAVC Sbjct: 140 LAALARGAHDPRLILHSFL---LRALAQAGWAPTFDRCARCGAPGPHTALHVGLGGAVCP 196 Query: 174 SVGLP 178 P Sbjct: 197 ECRPP 201 >gi|314933738|ref|ZP_07841103.1| DNA repair protein RecO [Staphylococcus caprae C87] gi|313653888|gb|EFS17645.1| DNA repair protein RecO [Staphylococcus caprae C87] Length = 253 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 71/202 (35%), Gaps = 15/202 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQA---GNLVR 55 M + II+ YGE + I+ ++ + R + + +Q Q G + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGLQAHTQMFVYGLFIY 60 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 WR +G +V+ H L Y + R + E E YD+L Sbjct: 61 NKWRG-----MGTLNSVDVINQHYELQLDLFESSYASLCTETIERSMEENEVSKYNYDLL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVC 172 L + + + + L + GF +CV+TG L+ S K GA+ Sbjct: 116 YFVLTKIAEGTSAQLMSIVVLLKCMSKFGFTASFNQCVITGNEDQSKLVGYSFKFDGAIS 175 Query: 173 RSV--GLPYAEKMLVLPSFLWK 192 V P+A K+ +L Sbjct: 176 EEVLYQDPHAFKLTNRSLYLLD 197 >gi|134098078|ref|YP_001103739.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] gi|291007463|ref|ZP_06565436.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] gi|166221909|sp|A4F9T9|RECO_SACEN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|133910701|emb|CAM00814.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] Length = 273 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 20/185 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D A++L V+ GE + I+ ++TR+YG+ + + + R ++ + V + Sbjct: 4 YRDSAVVLRVQKLGEADRIITLLTRRYGKVRAVAKGVRRTTSRFGARVEPFCHIDVQLYT 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-----EREPCLELYD-- 112 R + + L++ A ++ S + + E EP L LY Sbjct: 64 GRTLD--VITQVQTLDAFGAHIVDDYQR---YTSACAVLETVDRLAAEEGEPVLRLYLLA 118 Query: 113 --MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + S++ F+ L + G+ L +C + +GGA Sbjct: 119 TGALRALAGRERDSSLVLDAFL---LRAMSFAGWAPALDECARCNARGPHAAFNVAAGGA 175 Query: 171 VCRSV 175 VC Sbjct: 176 VCAEC 180 >gi|295394790|ref|ZP_06805005.1| recombination protein O [Brevibacterium mcbrellneri ATCC 49030] gi|294972386|gb|EFG48246.1| recombination protein O [Brevibacterium mcbrellneri ATCC 49030] Length = 242 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 18/186 (9%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR---- 55 M ++D I++G GE ++I+ ++TR +G + + + + G+ + Sbjct: 1 MRFYRDTGIVVGHTKLGEADLIVSILTRDHGLVRAVAKGVRRTKSRF----GSRLDLFMM 56 Query: 56 VNWRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-----CLE 109 V++++ + +NL E++E ++ ++ L E EP L Sbjct: 57 VDFQAHIGRNLDIVTQVELIEPFGHGIVGDYDVFAAAAAMAETAAKLTENEPNTRDQYLL 116 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L L N P + ++ L ++ G+ L CV G S SGG Sbjct: 117 LSAALRSLCNREHPPRLALNAYL---LRAMRTAGWEPGLDACVSCGAPGPHRAFSFNSGG 173 Query: 170 AVCRSV 175 VC + Sbjct: 174 VVCVAC 179 >gi|15674265|ref|NP_268438.1| DNA repair protein RecO [Streptococcus pyogenes M1 GAS] gi|19745216|ref|NP_606352.1| DNA repair protein RecO [Streptococcus pyogenes MGAS8232] gi|28894929|ref|NP_801279.1| DNA repair protein RecO [Streptococcus pyogenes SSI-1] gi|50913365|ref|YP_059337.1| DNA repair protein RecO [Streptococcus pyogenes MGAS10394] gi|56808893|ref|ZP_00366603.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Streptococcus pyogenes M49 591] gi|71902685|ref|YP_279488.1| DNA repair protein RecO [Streptococcus pyogenes MGAS6180] gi|71909833|ref|YP_281383.1| DNA repair protein RecO [Streptococcus pyogenes MGAS5005] gi|94987650|ref|YP_595751.1| DNA repair protein RecO [Streptococcus pyogenes MGAS9429] gi|94989528|ref|YP_597628.1| DNA repair protein RecO [Streptococcus pyogenes MGAS10270] gi|94991517|ref|YP_599616.1| DNA repair protein RecO [Streptococcus pyogenes MGAS2096] gi|94993415|ref|YP_601513.1| DNA repair protein RecO [Streptococcus pyogenes MGAS10750] gi|139472905|ref|YP_001127620.1| DNA repair protein RecO [Streptococcus pyogenes str. Manfredo] gi|161485758|ref|NP_663820.2| DNA repair protein RecO [Streptococcus pyogenes MGAS315] gi|209558603|ref|YP_002285075.1| DNA repair protein RecO [Streptococcus pyogenes NZ131] gi|306828288|ref|ZP_07461544.1| recombination protein O [Streptococcus pyogenes ATCC 10782] gi|54039037|sp|P65988|RECO_STRP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54039038|sp|P65989|RECO_STRP8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54041797|sp|P65987|RECO_STRP1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61214792|sp|Q5XEK9|RECO_STRP6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|92087037|sp|Q48VX9|RECO_STRPM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361489|sp|Q1JE86|RECO_STRPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361490|sp|Q1JP42|RECO_STRPC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361491|sp|Q1JJ89|RECO_STRPD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361492|sp|Q1J942|RECO_STRPF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221912|sp|A2RBY9|RECO_STRPG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058648|sp|B5XJ12|RECO_STRPZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13621343|gb|AAK33160.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|19747307|gb|AAL96851.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|28810174|dbj|BAC63112.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|50902439|gb|AAT86154.1| RecO [Streptococcus pyogenes MGAS10394] gi|71801780|gb|AAX71133.1| DNA repair protein [Streptococcus pyogenes MGAS6180] gi|71852615|gb|AAZ50638.1| DNA repair protein [Streptococcus pyogenes MGAS5005] gi|94541158|gb|ABF31207.1| DNA repair protein [Streptococcus pyogenes MGAS9429] gi|94543036|gb|ABF33084.1| DNA repair protein recO [Streptococcus pyogenes MGAS10270] gi|94545025|gb|ABF35072.1| DNA repair protein recO [Streptococcus pyogenes MGAS2096] gi|94546923|gb|ABF36969.1| DNA repair protein recO [Streptococcus pyogenes MGAS10750] gi|134271151|emb|CAM29361.1| DNA repair protein RecO [Streptococcus pyogenes str. Manfredo] gi|209539804|gb|ACI60380.1| DNA repair protein recO [Streptococcus pyogenes NZ131] gi|304429518|gb|EFM32571.1| recombination protein O [Streptococcus pyogenes ATCC 10782] Length = 251 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 15/212 (7%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L R+Y E + ++++ T G+ + FV++ +M I+Q + + Sbjct: 1 MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIF- 59 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL----PEREPCLELYDMLN 115 +L + + + + +++ +F S V E + L+ L Sbjct: 60 -KLNDTGLSYVVDYSNVNTYRYINNDIFRLAYASYVLALADAAIADNESDSH--LFTFLK 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ + + E+ +L G L+ +C + T L S + +C Sbjct: 117 KTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDLPLDFSHRFSAVLCSE- 175 Query: 176 GLPYAE----KMLVLPSFLWKEEQTIDADSLK 203 Y + + +L Q I D L+ Sbjct: 176 -HYYKDNRRNHLDPNVIYLLSRFQKITFDDLR 206 >gi|291166724|gb|EFE28770.1| DNA repair protein RecO [Filifactor alocis ATCC 35896] Length = 253 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 12/183 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQA---GNLVR 55 MY + I+L Y + + IL + +++ G+ + +N + H + Q+ GN V Sbjct: 1 MYINTEGIVLKSVKYKDSDAILTLFSKKMGKVTVYAKNVRKMNHSSMAVSQSFAYGNFVL 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 L L F + + + + Y + + L E + L L Sbjct: 61 RTQGKML--QLSSFECKENFYFLTEDIDKTFLAYYF--VELSEKLLVENQTNHRLLQALL 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL---LWVSPKSGGAVC 172 L K + + E L+ G+ ++KC+ G+ +D + + GG C Sbjct: 117 ESLYALKDIEKYELVKLYFECKALRFCGYQPQVSKCLKCGIIRDNSIPFYFQVEDGGVYC 176 Query: 173 RSV 175 Sbjct: 177 YHC 179 >gi|223044384|ref|ZP_03614418.1| DNA repair protein RecO [Staphylococcus capitis SK14] gi|222442253|gb|EEE48364.1| DNA repair protein RecO [Staphylococcus capitis SK14] Length = 253 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 66/183 (36%), Gaps = 13/183 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQA---GNLVR 55 M + II+ YGE + I+ ++ + R + + +Q Q G + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGLQAHTQMFVYGLFIY 60 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 WR +G +V++ H L Y + R + E E YD+L Sbjct: 61 NKWRG-----MGTLNSVDVIDQHYELQLDLFESSYASLCTETIERSMEENEVSKYNYDLL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVC 172 L+ + + + + L + GF +CV+TG L+ S K GA+ Sbjct: 116 YFVLSKIAEGTSAQLMSIVVLLKCMSKFGFTASFNQCVITGNEDQSKLVGYSFKFDGAIS 175 Query: 173 RSV 175 V Sbjct: 176 EEV 178 >gi|293390945|ref|ZP_06635279.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951479|gb|EFE01598.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] Length = 108 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQNL 66 +L +SY E +++++++T +GR + ++ R ++ +LQ + + W R Sbjct: 1 MLHRKSYSETSLLIDLLTEDFGRISVLAKGARAKRSMLKGVLQPFTPLLLRWSGR----- 55 Query: 67 GEFRFEVLESHCAKLL-SSSLFLY-GLQSIVPLFRFLPEREPCLELYDM 113 GE + A L + LY G + R L +L+ Sbjct: 56 GELKILTKAEPAAIALPLQNTALYSGFYLNELICRVLEPETAYPQLFQQ 104 >gi|285019299|ref|YP_003377010.1| recombination protein o [Xanthomonas albilineans GPE PC73] gi|283474517|emb|CBA17018.1| probable recombination protein o [Xanthomonas albilineans] Length = 256 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 8/152 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + +L + E ++++E+++ +GR R Q + ++ LQ +R + Sbjct: 1 MIEHEPGFVLHAWPWRETSLLVEILSVHHGRLGVLARGVQGPKKQALRATLQPLQSIRFS 60 Query: 58 WRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R L + R E L+ A L+ L G R P +P +LY Sbjct: 61 AQRRGE--LAQLRAAEPLD--TAPRLTGEAMLAGFYINELTLRLAPRDDPAPDLYLAYAR 116 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + E +L+ +G DL Sbjct: 117 VRARLAAEAPLAWSLRCFERDMLEALGVWFDL 148 >gi|256545609|ref|ZP_05472967.1| DNA repair protein RecO (recombination protein O) [Anaerococcus vaginalis ATCC 51170] gi|256398686|gb|EEU12305.1| DNA repair protein RecO (recombination protein O) [Anaerococcus vaginalis ATCC 51170] Length = 252 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 71/175 (40%), Gaps = 6/175 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS-RLAQ 64 + +L SY E + I+E+ T+ G+ + + + + V+ ++ + + Sbjct: 10 EGFVLREFSYRESSKIIEIFTKDMGKISVIAKGVLNKKNSNLSSTQRFVKASYNLYKSGE 69 Query: 65 N-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 G +L+S+ + + +Y L + + + + +Y++L+ + + Sbjct: 70 KFFGIRDASLLKSYSKSNKNFDIIIYKSAICDLLLKTI-DYDQKDLVYNLLDKTFDSFEK 128 Query: 124 PSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDL--LWVSPKSGGAVCRSV 175 S IF+ L + GF +L +C + G + + S K GG VC S Sbjct: 129 ASENYLNIFLCFLLKYISFSGFKPNLKECSLCGSKINPSDAYFSIKDGGIVCSSC 183 >gi|262375523|ref|ZP_06068756.1| DNA repair protein RecO [Acinetobacter lwoffii SH145] gi|262309777|gb|EEY90907.1| DNA repair protein RecO [Acinetobacter lwoffii SH145] Length = 236 Score = 58.6 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y E++ I+ + T++YGR G +R + QPI ++ + +S L Sbjct: 7 HGYLIHHRKYRERSHIVHLFTQEYGRVDGILRQMPPPQYQPI-----RLQASGKSELKN- 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + E++ F G L R P + + L + S Sbjct: 61 --FTKLEIVNQ--PIFFFGDAFFSGFYLNEILLRLCPLEVEMPQTFAKYAETLTALQQLS 116 Query: 126 V--IGKIFV-----QIELMLLKNIGFGLDLT 149 +++ Q E +LL+ +G+GLD + Sbjct: 117 AQSNPNLYLKQILRQFEHVLLEELGYGLDFS 147 >gi|116670772|ref|YP_831705.1| DNA repair protein RecO [Arthrobacter sp. FB24] gi|116610881|gb|ABK03605.1| DNA replication and repair protein RecO [Arthrobacter sp. FB24] Length = 256 Score = 58.6 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 16/216 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++DDA++L GE + I+ ++T+ +G+ + + S R L+ + + Sbjct: 17 YRDDAVVLRTHKLGEADRIITLLTKHHGQVRAVAKGVRRTSSRFGARLEPFMVADLQLIS 76 Query: 60 SRLAQ------NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R G + + A ++ ++ L + E Y++ Sbjct: 77 GRTLDVVTQAVAKGAYG----GNIAADYGRYTVAAAMTETAEKLTDV--DGEAGTAQYNL 130 Query: 114 LNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L ++ + L L G+ T C G S GG VC Sbjct: 131 LVGALASLSRGEHTPELILDSYLLRALATGGWAPSFTVCARCGAPGPHTAFSAPLGGMVC 190 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQL 208 + P + FL T D + ++ L Sbjct: 191 SNCRPPGSPAPAAETVFLLGALLTGDWTTADTSLAL 226 >gi|118467581|ref|YP_888763.1| DNA repair protein RecO [Mycobacterium smegmatis str. MC2 155] gi|166221898|sp|A0R0S5|RECO_MYCS2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118168868|gb|ABK69764.1| DNA repair protein RecO [Mycobacterium smegmatis str. MC2 155] Length = 280 Score = 58.6 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 60/157 (38%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR +G + + R + L+ + V Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSS----LFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 ++ + + +++ A ++S L++ L ER P +L+ + Sbjct: 64 GRNLDIVT-QVQAIDAFAADIVSDYGRYTTACAMLETAERLAGE--ERAPMPDLHRLTVA 120 Query: 117 FLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCV 152 L ++ + L + G+ LT+C Sbjct: 121 ALRAIADGRRARELVLDSYLLRAMAIAGWAPALTECA 157 >gi|300780721|ref|ZP_07090575.1| recombination protein O [Corynebacterium genitalium ATCC 33030] gi|300532428|gb|EFK53489.1| recombination protein O [Corynebacterium genitalium ATCC 33030] Length = 245 Score = 58.6 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 30/192 (15%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRS 60 ++D A ++ +GE + ++ ++T+ +G + + + + +Q + V Sbjct: 7 FRDRAFVVRTYDFGEADRVVVLLTQNHGLVRSVAKGVRKTKSRFGSRVQPFVDLDV---- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGL---------QSIVPLFRFLPER-----EP 106 + + + ++ YG + + ER E Sbjct: 63 ---------QLYPGRNLATITQADTVAYYGSGIIEDFDRYTAACAVLES-AERLSYAGEA 112 Query: 107 CLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 L+ ++ + + + L + G+GL L C G P Sbjct: 113 DPALFAEVSTAIKRLQDAQQATMVLDAFILRAAAHAGWGLSLFDCANCGKPGPHHAFHPA 172 Query: 167 SGGAVCRSVGLP 178 GGA C + P Sbjct: 173 LGGATCLNCRPP 184 >gi|217974267|ref|YP_002359018.1| DNA repair protein RecO [Shewanella baltica OS223] gi|304409364|ref|ZP_07390984.1| DNA repair protein RecO [Shewanella baltica OS183] gi|307303722|ref|ZP_07583475.1| DNA repair protein RecO [Shewanella baltica BA175] gi|217499402|gb|ACK47595.1| DNA repair protein RecO [Shewanella baltica OS223] gi|304351882|gb|EFM16280.1| DNA repair protein RecO [Shewanella baltica OS183] gi|306912620|gb|EFN43043.1| DNA repair protein RecO [Shewanella baltica BA175] Length = 236 Score = 58.6 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 5/145 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L + L SLF G+ L R L + EL+ + + L Sbjct: 62 LKTLTQVEAAAPAVPLSGQSLF-AGMYINELLVRTLSVQHNAEELFLIYHQALVGLAAK- 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 IEL LL+ +GF L++ Sbjct: 120 FCQSQLRYIELALLRELGFMPSLSR 144 >gi|126173441|ref|YP_001049590.1| DNA repair protein RecO [Shewanella baltica OS155] gi|125996646|gb|ABN60721.1| DNA repair protein RecO [Shewanella baltica OS155] Length = 236 Score = 58.6 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 5/145 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L + L SLF G+ L R L + EL+ + + L Sbjct: 62 LKTLTQVEAAAPAVPLSGQSLF-AGMYINELLVRTLSVQHNAEELFLIYHQALVGLAAK- 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 IEL LL+ +GF L++ Sbjct: 120 FCQSQLRYIELALLRELGFMPSLSR 144 >gi|306820782|ref|ZP_07454407.1| recombination protein O [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551172|gb|EFM39138.1| recombination protein O [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 259 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 20/187 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVN 57 M + +AII+ + Y E + I+ T+++G+ F + + + P+L Q V + Sbjct: 1 MNVETEAIIIKTQKYKEFDEIVTAFTKKFGKINMFAHSSKKVKS-PLLSGTQLFGHVDME 59 Query: 58 W-----RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELY 111 SRL F ++ +S+ K Y + + + E + L+ Sbjct: 60 IDLRESSSRL------FSSKIKKSY-YKFSEDLHKYYLASYLCEMIEKTQQENITDIRLF 112 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVV--TGVTQDLLWVSPKSG 168 N + K+ + EL+LL+N+G L C+ T T+ L ++ G Sbjct: 113 KTTLEIFNYIENTKGKLKLIRLVFELILLRNLGVSPQLDCCIFCDTDDTEILRYIDISQG 172 Query: 169 GAVCRSV 175 VC + Sbjct: 173 SVVCDNC 179 >gi|301064134|ref|ZP_07204581.1| DNA repair protein RecO [delta proteobacterium NaphS2] gi|300441754|gb|EFK06072.1| DNA repair protein RecO [delta proteobacterium NaphS2] Length = 245 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M+ ++II +GE ++++ T GR G + + R L + L R+ + Sbjct: 1 MHIS-ESIITRTWEFGETDLLVSFFTVDRGRLKGVAKGARKSTRRFANCLDSFCLTRLEY 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIF 117 + ++L L +L + L ++ L L P ++D+L Sbjct: 60 ERKSGRDLYFLNSGKLIHGFPELRADFHALSLASYMIELTETLFPPGVSEPRMFDLLKDA 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 ++ + E L G+G++ +C G Sbjct: 120 FIALSGRIGRDELRIFFEAKALALGGYGINFERCCECGR 158 >gi|315655179|ref|ZP_07908080.1| DNA repair protein RecO [Mobiluncus curtisii ATCC 51333] gi|315490434|gb|EFU80058.1| DNA repair protein RecO [Mobiluncus curtisii ATCC 51333] Length = 243 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 6/175 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR- 59 ++D A++L + GE + I+ ++T ++G R + R+ L+ V + R Sbjct: 4 FRDAAVVLRTQDLGEADRIVTLLTEKHGLLRCVGRGVRKTMSRLGARLEPFGAVDIQIRW 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFL 118 + + E + E+L + L + +V L E Y + L Sbjct: 64 GKSDLHHIE-QVEILAPYGRSLANDYARYTAANLMVETLERLTEDSWTNERYYHLTIGAL 122 Query: 119 NCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + + L L+ G+ C G + +P GGA+C Sbjct: 123 HALATGRHEPSLILDSYLLRLMSLAGWAASCWDCASCGAGGPHEYFNPSGGGAMC 177 >gi|332665579|ref|YP_004448367.1| DNA repair protein recO [Haliscomenobacter hydrossis DSM 1100] gi|332334393|gb|AEE51494.1| DNA repair protein recO [Haliscomenobacter hydrossis DSM 1100] Length = 241 Score = 58.2 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 15/161 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP---ILQAGNLVRVN 57 M + I+ Y E ++I+++ T G FV +S + + I Q LV + Sbjct: 1 MLIETRGIVFRTVKYSESSLIVDIYTEAKGLQSYFVNGVRSQKSRQNASIFQVMTLVDLV 60 Query: 58 WRSRLAQNLGEFRFEVLESHC---AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + + ++ G R + ++S A G + + E E L+ L Sbjct: 61 --AGVREDRGLNRIKEIKSAFVYRAIPFDVRKSAVGTFITEVARKTIREAEAHPALFAFL 118 Query: 115 N---IFLNCHKIPSVIGKIFVQIELMLLKNIGF--GLDLTK 150 +FL+ + P + +E+ +GF G DL+ Sbjct: 119 YNTFLFLDQTQYPVANAHLHFLVEMS--GFLGFMPGGDLSA 157 >gi|160874399|ref|YP_001553715.1| DNA repair protein RecO [Shewanella baltica OS195] gi|160859921|gb|ABX48455.1| DNA repair protein RecO [Shewanella baltica OS195] gi|315266634|gb|ADT93487.1| DNA repair protein RecO [Shewanella baltica OS678] Length = 236 Score = 58.2 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 5/145 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L + L SLF G+ L R L + EL+ + + L Sbjct: 62 LKTLTQIEAAAPAVPLSGQSLF-AGMYINELLVRTLSVQHNAEELFLIYHQALVGLAAK- 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 IEL LL+ +GF L++ Sbjct: 120 FCQSQLRYIELALLRELGFMPSLSR 144 >gi|189347865|ref|YP_001944394.1| DNA repair protein RecO [Chlorobium limicola DSM 245] gi|238692211|sp|B3EI06|RECO_CHLL2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189342012|gb|ACD91415.1| DNA repair protein RecO [Chlorobium limicola DSM 245] Length = 261 Score = 58.2 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 65/165 (39%), Gaps = 14/165 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + A++L Y +++ I + T ++G+ ++ G+ R+ AGN++ + Sbjct: 1 MIVKTRAVVLREIKYRDQSKICTLFTSEFGKLTAILKGGRNPKSRLSGKFSAGNVLDIVL 60 Query: 59 ---RSRLAQNL---GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 R L G F L + +Y + I + + L E L L+ Sbjct: 61 YKKNGR-DIQLISDGSLLFSPL--SAEPDMERFATMYRI--IDLISQALEGEEKNLPLFS 115 Query: 113 MLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 +L L + +F+ L ++ +GF L +CV +G Sbjct: 116 LLTGVLEILYSTEERFELLFIWFLLRMISTLGFEPSLDRCVYSGE 160 >gi|325954539|ref|YP_004238199.1| DNA repair protein recO [Weeksella virosa DSM 16922] gi|323437157|gb|ADX67621.1| DNA repair protein recO [Weeksella virosa DSM 16922] Length = 237 Score = 58.2 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 3/153 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-QSHRMQPILQAGNLVRVNWR 59 M +L YG+ +IL + T+++G V N ++ + V V +R Sbjct: 1 MDITTRGFVLSAVKYGDTRLILRIYTQEFGLRSFIVGNAFAKNKSAALYFPLASVEVFFR 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFL 118 + L + ++ + + + + + + + L E E LY L L Sbjct: 61 LKNNSTLVNAKQLSAANYFHTIHVNPVKSTMVMFLAEVMQMVLKEEESNTLLYRYLEENL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKN-IGFGLDLTK 150 F LM L +GF ++ Sbjct: 121 IRFDEREKNYADFHLWFLMQLTKFLGFFPNIEA 153 >gi|300173397|ref|YP_003772563.1| DNA repair protein RecO [Leuconostoc gasicomitatum LMG 18811] gi|299887776|emb|CBL91744.1| DNA repair protein RecO [Leuconostoc gasicomitatum LMG 18811] Length = 263 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 65/184 (35%), Gaps = 6/184 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWR-SRLA 63 I+L R Y + ++++ ++T G R + + + +Q +V ++ Sbjct: 6 GIVLYTRQYKDNDLLVRMLTETRGLRTFLARGAKKQKSHLSAAMQPYTVVTFEGAFAKRT 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIFLNCH 121 LG ++ ++ + L + +++ + E E Y+ L + L Sbjct: 66 VGLGYIN-DIQQATYHRRLVDDIEANAYAALIASLIDETFEEGEVITRWYNQLLLALLKL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL +G + ++G T S K G + + Sbjct: 125 DEGLDPQIIANIFEIQLLVPLGVAPNWRADPISGQTTGRFDYSEKYNGIIAENHYELDEH 184 Query: 182 KMLV 185 ++++ Sbjct: 185 RLMI 188 >gi|111018235|ref|YP_701207.1| DNA repair protein RecO [Rhodococcus jostii RHA1] gi|119361482|sp|Q0SHD7|RECO_RHOSR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110817765|gb|ABG93049.1| probable DNA repair protein RecO [Rhodococcus jostii RHA1] Length = 271 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 77/219 (35%), Gaps = 21/219 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D+A++L GE + I+ ++TRQ+G + + + + L+ + V + Sbjct: 4 YRDNAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQLYP 63 Query: 60 SRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNI 116 R NL + +++ ++ +I+ L ER P +L+ + Sbjct: 64 GR---NLDIVTQVQTVDAFATDIVDDYSRYTTACAILETAERLAGEERAPAPQLHRLTVG 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + ++ + + LL+ +GF L C +GGAVC Sbjct: 121 ALRAVAEHNRPCELIL--DAFLLRAMGFAGWAPALDDCARCSAPGPHRAFHVAAGGAVCV 178 Query: 174 SVGLPYAEKMLVLPSFL-----WKEEQTIDADSLKSAFQ 207 P A P L + + + + Sbjct: 179 HCRPPGAAT--PSPGVLDLMDALIRGDWASTEDVPESLR 215 >gi|167627663|ref|YP_001678163.1| DNA repair protein RecO [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254764632|sp|B0TYI6|RECO_FRAP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167597664|gb|ABZ87662.1| DNA repair protein RecO [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 233 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 73/169 (43%), Gaps = 18/169 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL Y E ++++ + TR++G+ G +R + + + Q LV++ + ++ + Sbjct: 8 YILHQCKYKENSLLVSIFTREFGKISGLIR--VNKKTINLYQP--LVKLRGQISLAKKSD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 L + E +ES + L L + ++ L + E E L++ L Sbjct: 64 GLSKIYNVEFVESFYQNTYINLLSLQYMNELIYLLLSYSHEEE---FLFEKYGFILKNIN 120 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSG 168 + K ++ EL LL ++G G+ + C + G + + L + +G Sbjct: 121 E--INYKYLLRMFELELLDSLGQGVYVD-CDIDGMLIDESLSYSILATG 166 >gi|206890233|ref|YP_002248192.1| DNA repair protein RecO [Thermodesulfovibrio yellowstonii DSM 11347] gi|254790739|sp|B5YIN3|RECO_THEYD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|206742171|gb|ACI21228.1| DNA repair protein RecO [Thermodesulfovibrio yellowstonii DSM 11347] Length = 250 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 81/193 (41%), Gaps = 11/193 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNW 58 M++ +AI+L YGE ++I+ +T+ YG F ++ + + + L+ ++++ Sbjct: 1 MHYSTEAIVLKNIPYGEADLIVTYLTKNYGLLNLFAKSPRKIKSRFGSSLEPLTYSQISF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + +++ + LFL ++ L + LP++EP EL L + Sbjct: 61 IGKEDNLQKIIQSDIIHPFQTIRENYRLFLQIANALRFLIQALPKKEPNSEL-FYLLLNT 119 Query: 119 NCHKIPSVIGKIFVQI-ELMLLKNIGFGLDLTKCVVTGVTQDL---LWVSPKSGGAVCRS 174 + + ++ ++ L +G+ D C V Q+L + S SG +C+ Sbjct: 120 LLYLEKRIKPDNYILFLKVRGLSILGYLPDFKNCGVC--RQELKEEFYYS--SGFIICKK 175 Query: 175 VGLPYAEKMLVLP 187 Y LP Sbjct: 176 CSSSYHYSSSALP 188 >gi|72161256|ref|YP_288913.1| DNA repair protein RecO [Thermobifida fusca YX] gi|92087038|sp|Q47RM7|RECO_THEFY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71914988|gb|AAZ54890.1| Recombination protein O, RecO [Thermobifida fusca YX] Length = 243 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 68/162 (41%), Gaps = 12/162 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ I+L + GE + I+ ++TR+ G + + R + L+ + V + Sbjct: 4 YRDEGIVLRTQDLGEADRIVTLLTRRTGLVRAVGKGVRRTRSRFGARLEPFTHIDVQLHA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP-EREPCLE----LYDML 114 + ++ + + L ++ + L++ + G+ + + + E++P L L+ L Sbjct: 64 GKSLDVVT-QVDTLHAYGSVLVTDYPRYTAGVAMLETAEKVVSVEKDPALRQFLLLWGGL 122 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 P ++ ++ L L G+ L +C GV Sbjct: 123 RTLAEGAHDPRLVLDAYL---LRSLAVAGYAPALEECAHCGV 161 >gi|296119857|ref|ZP_06838411.1| DNA repair protein RecO [Corynebacterium ammoniagenes DSM 20306] gi|295967011|gb|EFG80282.1| DNA repair protein RecO [Corynebacterium ammoniagenes DSM 20306] Length = 230 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 14/178 (7%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WRSRLAQ 64 +++ +GE + ++ ++T+ +G + + + + LQ + V + R Sbjct: 1 MVIRSYDFGEADRVIVLLTKNHGLVRAVAKGVRRAKSRFGSRLQLFVNLDVQLYSGR--- 57 Query: 65 NLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER---EPCLELYDMLNIFLNC 120 NL + ++ A+++ + + ER + LY+++ L+ Sbjct: 58 NLATITQADTVDYFGAQIIDDYDK---YTAACVMLEA-AERLSLDHDPFLYELVVATLST 113 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + L + + G+ L C G P GGA C P Sbjct: 114 LQGSEQPMLELDAFLLKAMAHAGWAPSLFNCAQCGAPGPHHAFHPAIGGAACGKCRPP 171 >gi|189499187|ref|YP_001958657.1| DNA repair protein RecO [Chlorobium phaeobacteroides BS1] gi|238692226|sp|B3EKJ8|RECO_CHLPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189494628|gb|ACE03176.1| DNA repair protein RecO [Chlorobium phaeobacteroides BS1] Length = 261 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 8/161 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + A++L + E++ I + TR +GR ++ G+ R+ + G+L+ V Sbjct: 1 MLTKTRAVVLKEVKFREQSKICSLYTRDFGRISVILKGGRNLKSRLSGLFCTGSLLEVVL 60 Query: 59 RSRLAQNL---GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 +R ++L E R + +Y L I+ + E + L++ L Sbjct: 61 YNRSNRDLQLVSEARIIRSPMTAEPSMERFSAIYRLIEILKISTG--NEEKNIRLFNALE 118 Query: 116 IFLNCHKIPSVIGKIFVQI-ELMLLKNIGFGLDLTKCVVTG 155 L P V L L+ GF + +CV TG Sbjct: 119 RTLEKLCAPCRNADAAVAWFMLKLISESGFEPSIEQCVTTG 159 >gi|258593726|emb|CBE70067.1| putative DNA repair protein recO (Recombination protein O) [NC10 bacterium 'Dutch sediment'] Length = 249 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 75/194 (38%), Gaps = 13/194 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-----PILQAGNLVRVNWRS 60 +AI++G + GE + I+ TR+ G+ R + R + + G LV + Sbjct: 7 EAIVIGGHNLGEADRIIPFFTRKLGKVRAVARGARRVRSRYGGTLELFTLGQLVFFESPN 66 Query: 61 RLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + EF E A L Y ++ + EP E++ +L L Sbjct: 67 RTLHKINEFSVMEPFAGLKADLGRLGRGAYLVELAGASVE---DEEPNEEIFLLLRDALT 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRSVG 176 + ++ E+ LL+ +G+ L+L +C+V +SP GG VC Sbjct: 124 LLVLYDD-PRLVRSFEIRLLRIVGYLLELYRCLVCRSVLEQGAASAISPTRGGLVCLKCL 182 Query: 177 LPYAEKMLVLPSFL 190 + M + P L Sbjct: 183 PRAPDHMSISPESL 196 >gi|323144162|ref|ZP_08078798.1| DNA repair protein RecO [Succinatimonas hippei YIT 12066] gi|322416070|gb|EFY06768.1| DNA repair protein RecO [Succinatimonas hippei YIT 12066] Length = 246 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 59/166 (35%), Gaps = 5/166 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A ++ R Y E ++++E T +GR + ++ R + +LQ ++V+++ + Sbjct: 9 PAFVIHSREYHEHSLLIEFFTLNHGRVAAIAKRVKTVRSSFKYLLQPFFPLKVSFKQGKS 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E + + L+ ++ +L+ L Sbjct: 69 DLWQVYDVEPSGELIS--FAVPEIFCASYLNELLYYLYKSKDSDPKLFASYLETLKSISE 126 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW-VSPKSG 168 + K + E LL ++G+G+ + + P SG Sbjct: 127 KISLDKALREFEFALLDSLGYGIRFEDKDGNALQSGCFYHFLPDSG 172 >gi|313888960|ref|ZP_07822620.1| DNA repair protein RecO [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845133|gb|EFR32534.1| DNA repair protein RecO [Peptoniphilus harei ACS-146-V-Sch2b] Length = 234 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 34/176 (19%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 I+L +GE + I+ V T++YG+ V+ S + + + V+ L + L Sbjct: 10 GIVLNEMGFGESSKIIRVFTKEYGKISIMVKGAMSPKSRN-------LSVSQVFGLNEYL 62 Query: 67 GEFRFEVLESHCAKLLSSSLFL--------------YGLQSIVPLFRFLPEREPCLELYD 112 + + +S S L Y + + + E + +D Sbjct: 63 ------LKKGQSFFYISDSKILESNFKIRENYDNLIYASLLLEIIDKSSISGEANKKAFD 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 +L LN + + EL L IG+ L ++ + S + G Sbjct: 117 LLRKTLNFFNFTKDPIGLALAFELKYLSFIGYRPKLD-------IKEKSYFSIREG 165 >gi|161353755|ref|YP_480379.2| DNA repair protein RecO [Frankia sp. CcI3] gi|119361459|sp|Q2JDJ2|RECO_FRASC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 243 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 10/180 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L E + I+ V+TR+ GR + + S R L+ G V + S Sbjct: 4 YRDEGVVLRTAPLAEADRIITVLTRRTGRVRAVAKGVRKTSSRFGSRLEPGTYVDLLLHS 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSS----LFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 A + + +++ + A + L++ L ER+P L L+ +L Sbjct: 64 GRALDTVT-QADIISPYGATIAVDYPRYTAAAVMLETAERLTSE--ERQPALRLFLLLVG 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + + L L G+G+ L C G L +S GG VC Sbjct: 121 GLRTLAGDERPPALVLDAFLLRALAVSGYGMALDHCARCGGPGLHLSLSVPGGGVVCPQC 180 >gi|146292264|ref|YP_001182688.1| DNA repair protein RecO [Shewanella putrefaciens CN-32] gi|145563954|gb|ABP74889.1| DNA repair protein RecO [Shewanella putrefaciens CN-32] Length = 236 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 5/145 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L + L SLF G+ L R L + L+ + + L Sbjct: 62 LKTLTQIEAAAPAVPLFGQSLF-AGMYINELLVRTLSVQHHAEALFLIYHRALVGLAAK- 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 IEL LL+ +G L++ Sbjct: 120 FCQSQLRYIELALLQELGAMPSLSR 144 >gi|317132161|ref|YP_004091475.1| DNA repair protein RecO [Ethanoligenens harbinense YUAN-3] gi|315470140|gb|ADU26744.1| DNA repair protein RecO [Ethanoligenens harbinense YUAN-3] Length = 265 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 17/182 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-----WRS 60 D +++ + GE + L ++TR+YG R R++ + G + + ++ Sbjct: 18 DGLVIRDYNVGEADRFLTLLTRKYGAIRASARGA--RRIKSGVSTGTQLLCHADFTLFKG 75 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN----I 116 R + E L + + L Q L FL +E EL+ L Sbjct: 76 REKYIIDEAT--PLTLFMG-IRAELEKLALAQYFCELEDFLAPKEEEAELFLRLILNALA 132 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 L K PS+ +I E+ LL G+ DL C G + D + + P+SG +C S Sbjct: 133 LLEAGKHPSM--QIKAAFEMRLLAISGYMPDLVACAGCGTYEADGMVLLPRSGVFLCASC 190 Query: 176 GL 177 Sbjct: 191 AA 192 >gi|167747960|ref|ZP_02420087.1| hypothetical protein ANACAC_02692 [Anaerostipes caccae DSM 14662] gi|167652610|gb|EDR96739.1| hypothetical protein ANACAC_02692 [Anaerostipes caccae DSM 14662] Length = 246 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 16/183 (8%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN-W 58 + ++L + GE + + ++T++ GR F R + Q + + Sbjct: 4 EIKVTGLVLNAGNIGEFDKRVTLLTKERGRITAFARGAKKATSPYAAACQPLTFGEFSLY 63 Query: 59 RSRLAQNL-----GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R + NL G + FE ++ L YG E E+ + Sbjct: 64 EGRSSFNLMWADVGHY-FEGVKE------DLLLVSYGSYFCEFASYLTRENNDEKEILKL 116 Query: 114 LNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + L + ++ K+ + E+ L+ G G+++ C G T+DL +GG +C Sbjct: 117 LYLSLRALEKKTIDPKLIRRVFEIKLMALYGQGMEVFCCTQCGSTEDLSCFDSSAGGILC 176 Query: 173 RSV 175 + Sbjct: 177 SNC 179 >gi|158521720|ref|YP_001529590.1| DNA repair protein RecO [Desulfococcus oleovorans Hxd3] gi|226737861|sp|A9A0L3|RECO_DESOH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|158510546|gb|ABW67513.1| DNA repair protein RecO [Desulfococcus oleovorans Hxd3] Length = 260 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 15/189 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAG---NLVRVN 57 + AIIL +Y E + IL+++T + GR +N + + + IL+ + V + Sbjct: 4 FSSPAIILRRTAYAEYDTILDLLTLERGRITAMAKNARKSKKRFAGILEPFCCLDAVFTD 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFLPEREPCLELYDMLNI 116 +R + + + + + + Y + R++ E + L+ +L+ Sbjct: 64 PSAR--SGMTILKEAAMTAPFGAIRLNMEKVAYASYWSEMVNRWVKEDDTQSALFHLLHY 121 Query: 117 FLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS------GG 169 L + ++ + G + C V D L SP GG Sbjct: 122 VLFMLDSGKASHADLSILFQVRFMTLAGLFPGMAACRVCKTEIDRLSGSPTLYLDIARGG 181 Query: 170 AVCRSVGLP 178 VC G Sbjct: 182 IVCHRCGGE 190 >gi|325849578|ref|ZP_08170816.1| DNA repair protein RecO [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480059|gb|EGC83136.1| DNA repair protein RecO [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 252 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 71/175 (40%), Gaps = 6/175 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS-RLAQ 64 + +L +Y E + I+E+ T+ G+ + + + + V+ ++ + + Sbjct: 10 EGFVLREFTYKESSKIIEIFTKNMGKISVIAKGVLNKKNTNLSSTQRFVKASYNLYKSGE 69 Query: 65 N-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 G +++S+ + + +Y L R + + + +Y++L+ + Sbjct: 70 KFFGIKDASLIKSYSKSNKNFDIIVYKSAICDLLLRTI-DFDQKELVYNLLDKTFESFEK 128 Query: 124 PSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCRSV 175 S IF+ L + GF +L +C + G + ++ S + GG VC S Sbjct: 129 ASENYLNIFLCFLLKYISFSGFKPNLKECSICGENIKPNYVYFSIEDGGVVCNSC 183 >gi|332525371|ref|ZP_08401534.1| DNA replication and repair protein RecO [Rubrivivax benzoatilyticus JA2] gi|332108643|gb|EGJ09867.1| DNA replication and repair protein RecO [Rubrivivax benzoatilyticus JA2] Length = 251 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 14/155 (9%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQN 65 +L + E ++I+E+ TR+ GR + + + + +++P+L + V L + Sbjct: 12 YVLHSWDWSETSLIVELFTRERGRVVVAAKGAKRPTSQLRPVLLPFQRIAVQ----LGRT 67 Query: 66 LGEFRFEVLESHCAKLLS--SSLFLYGLQSI----VPLFRFLPEREPCLELYDMLNIFLN 119 + E+ A+ + + S L + L ++ +L+D Sbjct: 68 PADEAAEIHTLRTAEWGGGVPPVPAAAMFSAFYCNELLMKLLARQDAYPQLFDAYAET-- 125 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + EL+LL+ G +L +T Sbjct: 126 LAALAADEASALRAFELVLLRETGLLPELGSETLT 160 >gi|221068686|ref|ZP_03544791.1| DNA repair protein RecO [Comamonas testosteroni KF-1] gi|220713709|gb|EED69077.1| DNA repair protein RecO [Comamonas testosteroni KF-1] Length = 259 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 8/158 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 + A IL + E ++ILEV TR GR + + H +P+L +++++ Sbjct: 10 EPAYILHQYDWSESSLILEVFTRHRGRVALAAKGVKRHTSNFRPVLLPLQPLKLSYTLGA 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFL--- 118 N + E ++ L G+ L R L +P L+D+ + Sbjct: 70 EGNAEIHTLKGAEWAGGHVMPQGDALWSGMYLNELLLRLLARDDPYAALFDIYAGVVRVL 129 Query: 119 --NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 I + EL+LL+ +G DL + T Sbjct: 130 AGQHGGTTEAIEPVLRAFELVLLRELGHLPDLRQESAT 167 >gi|212702602|ref|ZP_03310730.1| hypothetical protein DESPIG_00628 [Desulfovibrio piger ATCC 29098] gi|212674043|gb|EEB34526.1| hypothetical protein DESPIG_00628 [Desulfovibrio piger ATCC 29098] Length = 250 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 20/176 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M W D A++L + ++ E +I L+++ R++G F G R + L N ++ Sbjct: 1 MEWTDQALVLRMGAFRESDIWLKLLCREHGLLTLFAFGGSRSRRRFCGCLDVLNSLQCRV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSS------LFLYGLQSIVPLFRFLPEREPCLELY- 111 RS E L L L+ + + + E + Sbjct: 61 RSSKDGR--FLNLEEAALLQGPRLLRRNWQRMGLAANCLRFVEAMGVG---EDAAPEAFL 115 Query: 112 --DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWV 163 + L L K P V+ ++ + L L +GF +L +C G +D L+V Sbjct: 116 LVEDLRAVLEAEKAPPVLLPLYFR--LRLAGALGFAPNLGQCGRCGREISEDALFV 169 >gi|293189544|ref|ZP_06608264.1| DNA repair protein RecO [Actinomyces odontolyticus F0309] gi|292821634|gb|EFF80573.1| DNA repair protein RecO [Actinomyces odontolyticus F0309] Length = 245 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 22/189 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-R 59 ++D+AI+L GE + I+ ++T ++G+ + + + ++ +++ R Sbjct: 4 YRDEAIVLRTHKLGEADRIITLLTAEHGQVRAVAKGVRKTTSKFGARVEPFSVIDAQLHR 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER---EPCLELYDMLNI 116 R L + + A+ + Y L + ER + + + Sbjct: 64 GRTLDTLTQV------ASIAQYGDAIAANYDLYLAATVVVETAERLTADAHDGTHSQYLL 117 Query: 117 FLNCH-------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L P++I + L L G+ C V G S GG Sbjct: 118 LLGALNALARGRHDPTLIRTSYT---LRALALAGWAPSCFDCAVCGTQGPHTSFSIPDGG 174 Query: 170 AVCRSVGLP 178 VC + P Sbjct: 175 TVCDTCRPP 183 >gi|113460242|ref|YP_718300.1| DNA repair protein RecO [Haemophilus somnus 129PT] gi|112822285|gb|ABI24374.1| DNA replication and repair protein RecO [Haemophilus somnus 129PT] Length = 202 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 12/127 (9%) Query: 35 FVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKL---LSSSLFLY 89 + ++ R + +LQ + +NW R GE + ++++ L L ++ Sbjct: 1 MAKGARAKRSAWKSLLQPFTPLLLNWSGR-----GELKI-LIKAEAISLTLPLQTTALYS 54 Query: 90 GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDL 148 G + R L +L+ L P I K E LL+ +G+ +D Sbjct: 55 GFYVNELIARLLAPETAYPDLFQYYLQCLTALASSPQEIEKSLRTFEFQLLEVLGYAVDF 114 Query: 149 TKCVVTG 155 C +G Sbjct: 115 CHCAGSG 121 >gi|125973581|ref|YP_001037491.1| DNA replication and repair protein RecO [Clostridium thermocellum ATCC 27405] gi|256003399|ref|ZP_05428390.1| DNA repair protein RecO [Clostridium thermocellum DSM 2360] gi|281417785|ref|ZP_06248805.1| DNA repair protein RecO [Clostridium thermocellum JW20] gi|166221889|sp|A3DEB9|RECO_CLOTH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|125713806|gb|ABN52298.1| DNA replication and repair protein RecO [Clostridium thermocellum ATCC 27405] gi|255992689|gb|EEU02780.1| DNA repair protein RecO [Clostridium thermocellum DSM 2360] gi|281409187|gb|EFB39445.1| DNA repair protein RecO [Clostridium thermocellum JW20] gi|316940178|gb|ADU74212.1| DNA repair protein RecO [Clostridium thermocellum DSM 1313] Length = 251 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 65/173 (37%), Gaps = 14/173 (8%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV----- 54 M + + I++ + GE + I+ + ++ G+ + R + L AG + Sbjct: 1 MNYLKTSGIVIKEVNTGEADRIITIFSKNKGKISALAKGA--RRPKSHLVAGTQLLCYSE 58 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDM 113 V ++ + +V+ES + + L ++ + + E +P L + Sbjct: 59 FVLFKGK--DMYTVNSCDVIES-FYDIRNDLERLTYAAHMMDIVNDVILENQPASRLLQL 115 Query: 114 LNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVS 164 L V+ E+ LL +G+ ++ C+ G T D ++ S Sbjct: 116 FLNSLYMLSKTDRSPLQIVRVFEIRLLSTMGYAPWVSSCIKCGSTVFDSMYFS 168 >gi|309388939|gb|ADO76819.1| DNA repair protein RecO [Halanaerobium praevalens DSM 2228] Length = 256 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 70/183 (38%), Gaps = 14/183 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQ-PILQAGNLVRVNWRS 60 ++ +A++L GE + ++ + T++ G+ + + + + ++ + Sbjct: 4 FETEALVLKQFDLGEADRLITLYTKEKGKLKAVAKGARKGKKTRSGLVLPFSYHNFT--- 60 Query: 61 RLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNIF 117 L Q + +ES L L S+V + R E E L+ +L I Sbjct: 61 -LYQGRSLAKINHIESIAMNSKLRDDLDYMAYASVVSEYIERSGLEAEADQALFSLLAII 119 Query: 118 LNCHKIPSVIGKI--FVQIELMLLKNIGFGLDLTKCVVTGVTQDL---LWVSPKSGGAVC 172 L + FV + LL +G ++ C V G +L +S + GG +C Sbjct: 120 LEKMAQAKKNELLFNFVIFKAKLLLLLGVKPEIENCTVCGKKVNLKKGAPLSVEEGGTIC 179 Query: 173 RSV 175 ++ Sbjct: 180 KNC 182 >gi|325963337|ref|YP_004241243.1| DNA replication and repair protein RecO [Arthrobacter phenanthrenivorans Sphe3] gi|323469424|gb|ADX73109.1| DNA replication and repair protein RecO [Arthrobacter phenanthrenivorans Sphe3] Length = 250 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 16/186 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++DDA++L GE + I+ ++T+ +G+ + + S R L+ + + Sbjct: 11 YRDDAVVLRTHKLGEADRIITLLTKHHGQVRAVAKGVRRTSSRFGARLEPFMVADLQLVS 70 Query: 60 SRLAQ------NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + G + S A ++ ++ L + E Y++ Sbjct: 71 GKTLDIVTQAVAKGAYG----GSIAADYGRYTVAAAMTETAEKLTDV--DGEAGTAQYNL 124 Query: 114 L-NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + G I L L G+ T C G+ S GG VC Sbjct: 125 LVGALASLSRDEHAAGLILDSYLLRALATGGWAPSFTHCARCGMPGPHTAFSAALGGMVC 184 Query: 173 RSVGLP 178 P Sbjct: 185 GGCRPP 190 >gi|152999780|ref|YP_001365461.1| DNA repair protein RecO [Shewanella baltica OS185] gi|151364398|gb|ABS07398.1| DNA repair protein RecO [Shewanella baltica OS185] Length = 236 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 5/145 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSVLVNLLVDGIGRVDVVSRTGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L + L SLF G+ L R L + EL+ + + L Sbjct: 62 LKTLTQVEAAAPAVPLSGQSLF-AGMYINELLVRTLSVQHNAEELFLIYHQALVGLAAK- 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 IEL LL+ +GF L++ Sbjct: 120 FCQSQLRYIELALLRELGFMPSLSR 144 >gi|332184360|gb|AEE26614.1| DNA recombination and repair protein RecO [Francisella cf. novicida 3523] Length = 232 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 19/147 (12%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ + TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILHQRKYRENSLLVSIFTREFGKVSALI--TVNKKTTNLYQP--LVKLKGQIKLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL----PEREPCLELYDMLNIFLN 119 L + E +ES S + L LQ I L L E + L+D + L Sbjct: 64 GLAKIYNIEFVES---FYQKSYINLLSLQYINELIYLLLNYSHEED---ILFDKYDFILR 117 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGL 146 + + EL LL ++G G+ Sbjct: 118 NIDEANYRY-LLRMFELELLNSLGQGI 143 >gi|223940465|ref|ZP_03632316.1| DNA repair protein RecO [bacterium Ellin514] gi|223890868|gb|EEF57378.1| DNA repair protein RecO [bacterium Ellin514] Length = 210 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 5/154 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVN 57 M IIL R + + I+ +T +GR + + P L L + Sbjct: 1 MIENATGIILRTRPLTDTSFIIHWLTPDFGRLATVAKGAR-RAKSPFAGKLDLFYLADFS 59 Query: 58 W-RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + RSR ++ + ++H L + + P E +++++ Sbjct: 60 FLRSRRSELHNLREVNLKDTHAGLRRELDYVLQASYCTALVEQTTEMETPLPETFELMSG 119 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 FL + ++ E+ LL G DL Sbjct: 120 FLKHLPQHPPLPQMLFGFEVKLLSEQGLQPDLEN 153 >gi|264677120|ref|YP_003277026.1| pyridoxal phosphate biosynthetic protein PdxJ [Comamonas testosteroni CNB-2] gi|262207632|gb|ACY31730.1| Pyridoxal phosphate biosynthetic protein PdxJ [Comamonas testosteroni CNB-2] Length = 516 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 8/158 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 + A IL + E ++ILEV TR GR + + H +P+L +++++ Sbjct: 10 EPAYILHQYDWSESSLILEVFTRHRGRVALAAKGVKRHTSNFRPVLLPLQPLKLSYTLGA 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFL--- 118 N + E ++ L G+ L R L +P L+D+ + Sbjct: 70 EGNAEIHSLKGAEWVGGHVMPQGDALWSGMYLNELLLRLLARDDPYTALFDIYAGVVRVL 129 Query: 119 --NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 I + EL+LL+ +G DL + T Sbjct: 130 AGQHGGTTEAIEPVLRAFELVLLRELGHLPDLRQESAT 167 >gi|302343330|ref|YP_003807859.1| DNA repair protein RecO [Desulfarculus baarsii DSM 2075] gi|301639943|gb|ADK85265.1| DNA repair protein RecO [Desulfarculus baarsii DSM 2075] Length = 253 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 18/206 (8%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWRS 60 +D A++L +R GE +++++ R+ GR + + R + L L W S Sbjct: 6 RDHALVLRLRELGESDLLVDFFGRRIGRGTAIAKGARRSRKRFFGLLLVGHLLELELWPS 65 Query: 61 RLAQNLGEFRFE---VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +R E +LE+H A +L+G + L R +P D+ Sbjct: 66 KSGD---LWRLEAAWLLENHQALRADWRRWLFGAPVLELLLRATASHDPHPAALDLALRA 122 Query: 118 LNCHKIPS---VIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGAV 171 L+ S ++ + L+L +G+GL L CV G + L +SP+ GG V Sbjct: 123 LSACGQASDKKLLASRLLVFCLLLASELGYGLSLEHCVRCGRPVADEPGLALSPE-GGLV 181 Query: 172 CRSVGLPYAEKMLVLPSFLWKEEQTI 197 C + L L + +T Sbjct: 182 CGQCPAGPRAR--PLAPGLRQGLRTA 205 >gi|212696009|ref|ZP_03304137.1| hypothetical protein ANHYDRO_00545 [Anaerococcus hydrogenalis DSM 7454] gi|212676996|gb|EEB36603.1| hypothetical protein ANHYDRO_00545 [Anaerococcus hydrogenalis DSM 7454] Length = 224 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 69/175 (39%), Gaps = 6/175 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR--SRLA 63 + +L +Y E + I+E+ T+ G+ + + + + V+ ++ Sbjct: 10 EGFVLREFTYKESSKIIEIFTKNMGKISVIAKGVLNKKNTNLSSTQRFVKASYNLYKSGD 69 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + G +++S+ + + +Y L R + + + +Y++L+ + Sbjct: 70 KFFGIKDASLIKSYSKSNKNFDIIVYKSAICDLLLRTI-DFDQKELVYNLLDKTFESFEK 128 Query: 124 PSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCRSV 175 S IF+ L + GF +L C + G + ++ S + GG VC S Sbjct: 129 ASENYLNIFLCFLLKYISFSGFKPNLKGCSICGENIKPNYVYFSIEDGGVVCNSC 183 >gi|294507177|ref|YP_003571235.1| DNA repair protein recO [Salinibacter ruber M8] gi|294343505|emb|CBH24283.1| DNA repair protein recO [Salinibacter ruber M8] Length = 314 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 59/161 (36%), Gaps = 6/161 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + A++L YGE + I+ + T++ G+ + + + LQ +V + + Sbjct: 62 RTKAVVLRSIDYGETSQIVTLFTQEKGKLGVMAKGARRPKSSFGATLQPMAYTQVVFYHK 121 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ L E L L GL+ + + + E +P + ++ L+ Sbjct: 122 PSRTLQTLS-ESSHVQSFHRLREKLPTITVGLRIVELVDALMEEEDPQPAAFALVVRALH 180 Query: 120 CHKIPSVIGKIFVQI-ELMLLKNIGFGLDLTKCVVTGVTQD 159 I +L L + +G + + V VT D Sbjct: 181 RLNIAEARVSNLWPYVQLQLAQILGVAPAVDRTRVEAVTGD 221 >gi|227503134|ref|ZP_03933183.1| DNA repair protein RecO [Corynebacterium accolens ATCC 49725] gi|306836627|ref|ZP_07469593.1| recombination protein O [Corynebacterium accolens ATCC 49726] gi|227076195|gb|EEI14158.1| DNA repair protein RecO [Corynebacterium accolens ATCC 49725] gi|304567457|gb|EFM43056.1| recombination protein O [Corynebacterium accolens ATCC 49726] Length = 238 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 63/182 (34%), Gaps = 8/182 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWR 59 ++D A+++ +GE + ++ ++T+ +G + + + + LQ + V Sbjct: 4 NYRDRAVVIRSYDFGEADRVIVLLTQNHGLVRAVAKGVRRAKSRFGSRLQLFVNLDVQLY 63 Query: 60 SRLAQNLGEF-RFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFL-PEREPCLELYDMLNI 116 + +NL + + + A+L+ + R + + + LY+ + Sbjct: 64 --VGKNLATISQADTVNYFGARLIEDYERYTAACAVLESAERLIYADGDGDPYLYNAVVA 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + L + + G+ L C P GGA C Sbjct: 122 TLEHLQTEE-PTQTLDAFLLQAMAHAGWAPSLFDCAQCQRPGPHHAFHPAVGGAACHECR 180 Query: 177 LP 178 P Sbjct: 181 PP 182 >gi|127511989|ref|YP_001093186.1| DNA repair protein RecO [Shewanella loihica PV-4] gi|126637284|gb|ABO22927.1| DNA repair protein RecO [Shewanella loihica PV-4] Length = 231 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 5/144 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++++ ++ GR R G ++ ILQ + R + Sbjct: 4 GYVLHTRPYRESSVLVNLLVDGLGRVDAVARLGSGKTSIKSILQPFQPLLFQLSGR-SSL 62 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ E + A LS + G L R L + + + L Sbjct: 63 KSLYQVEA--ASPAVPLSGNDSFAGFYLNELLVRCLSVEHGAEQFFFTYHKTLMAMAAAF 120 Query: 126 VIGKIFVQIELMLLKNIGFGLDLT 149 ++ Q EL LLK +G L Sbjct: 121 SEAQL-RQFELSLLKELGVMPSLN 143 >gi|83816235|ref|YP_445302.1| DNA repair protein RecO [Salinibacter ruber DSM 13855] gi|119361484|sp|Q2S3C9|RECO_SALRD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83757629|gb|ABC45742.1| DNA repair protein RecO [Salinibacter ruber DSM 13855] Length = 260 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 59/161 (36%), Gaps = 6/161 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + A++L YGE + I+ + T++ G+ + + + LQ +V + + Sbjct: 8 RTKAVVLRSIDYGETSQIVTLFTQEKGKLGVMAKGARRPKSSFGATLQPMAYTQVVFYHK 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ L E L L GL+ + + + E +P + ++ L+ Sbjct: 68 PSRTLQTLS-ESSHVQSFHRLREKLPTITVGLRIVELVDALMEEEDPQPAAFALVVRALH 126 Query: 120 CHKIPSVIGKIFVQI-ELMLLKNIGFGLDLTKCVVTGVTQD 159 I +L L + +G + + V VT D Sbjct: 127 RLNIAEARVSNLWPYVQLQLAQILGVAPAVDRTRVEAVTGD 167 >gi|18310996|ref|NP_562930.1| DNA repair protein RecO [Clostridium perfringens str. 13] gi|110800456|ref|YP_696694.1| DNA repair protein RecO [Clostridium perfringens ATCC 13124] gi|110803552|ref|YP_699295.1| DNA repair protein RecO [Clostridium perfringens SM101] gi|168204747|ref|ZP_02630752.1| DNA repair protein RecO [Clostridium perfringens E str. JGS1987] gi|168208716|ref|ZP_02634341.1| DNA repair protein RecO [Clostridium perfringens B str. ATCC 3626] gi|168212949|ref|ZP_02638574.1| DNA repair protein RecO [Clostridium perfringens CPE str. F4969] gi|168215641|ref|ZP_02641266.1| DNA repair protein RecO [Clostridium perfringens NCTC 8239] gi|169343745|ref|ZP_02864744.1| DNA repair protein RecO [Clostridium perfringens C str. JGS1495] gi|182624416|ref|ZP_02952200.1| DNA repair protein RecO [Clostridium perfringens D str. JGS1721] gi|119361454|sp|Q0TNU6|RECO_CLOP1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361455|sp|Q0SRG2|RECO_CLOPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|18145678|dbj|BAB81720.1| probable DNA repair protein [Clostridium perfringens str. 13] gi|110675103|gb|ABG84090.1| DNA repair protein RecO [Clostridium perfringens ATCC 13124] gi|110684053|gb|ABG87423.1| DNA repair protein RecO [Clostridium perfringens SM101] gi|169298305|gb|EDS80395.1| DNA repair protein RecO [Clostridium perfringens C str. JGS1495] gi|170663629|gb|EDT16312.1| DNA repair protein RecO [Clostridium perfringens E str. JGS1987] gi|170713181|gb|EDT25363.1| DNA repair protein RecO [Clostridium perfringens B str. ATCC 3626] gi|170715476|gb|EDT27658.1| DNA repair protein RecO [Clostridium perfringens CPE str. F4969] gi|177910419|gb|EDT72796.1| DNA repair protein RecO [Clostridium perfringens D str. JGS1721] gi|182382418|gb|EDT79897.1| DNA repair protein RecO [Clostridium perfringens NCTC 8239] Length = 225 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 12/134 (8%) Query: 51 GNLVRVNWRS--RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPC 107 G+ + + RL++ + + L+ L Y + L + E Sbjct: 36 GDYLLFKGKGLYRLSEGK-------IRTSFQTSLTDLEKLTYASYLCELIDISLQDEEEN 88 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSP 165 LY L ++ ++ ++ EL LLK G+GL CV + ++S Sbjct: 89 FNLYKEFITCLYLINTEAISYELLIRAFELKLLKYTGYGLRFDNCVFCKNKLSVSNYISL 148 Query: 166 KSGGAVCRSVGLPY 179 + G VC + Sbjct: 149 RYFGGVCDKCPKEH 162 >gi|283458099|ref|YP_003362713.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18] gi|283134128|dbj|BAI64893.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18] Length = 309 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-R 59 W+D A+IL + GE + I+ ++TR G + + + L+ +++ R Sbjct: 33 WRDAALILRTQKLGETDRIIIMLTRDGGITHAVAKAVRKPTSKFGGRLEPFMHTDLSFSR 92 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFL 118 R + + L ++ A ++++ +I L L + + ++Y + + L Sbjct: 93 GRTNLHTIT-QAATLHAYTAPIMANYDAYTCASTIAELAEALTKDTDSTADIYTLTHGAL 151 Query: 119 NCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG 155 + +I + + G+ L C G Sbjct: 152 AALAHGQHVPQRILTRYLARSMNAAGWPLIGENCTRCG 189 >gi|305681524|ref|ZP_07404331.1| DNA repair protein RecO [Corynebacterium matruchotii ATCC 14266] gi|305659729|gb|EFM49229.1| DNA repair protein RecO [Corynebacterium matruchotii ATCC 14266] Length = 263 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 13/184 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 +++ A+++ GE + I+ +T+ G G + + R + LQ + V + Sbjct: 6 YRERALVIRTYDLGEADRIIVFLTQHRGLVRGVAKGVRRARSRFGSRLQPFVELDVQFYV 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRF-LPEREPCLELYDMLNIF 117 R + + + + + ++ + + R L E LY + Sbjct: 66 GRELE--SVTAADTVGFYGSGIIDNITCYTAASAVLEAAERLSLAHDEHDDRLY---PLV 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 ++ K + ++++ LL+ + G+ L C P++GGAVC + Sbjct: 121 VDTLKQLQHAPEPKLRLDTFLLQAMTVAGWAPSLYYCAQCQAPGPHHAFHPRTGGAVCGT 180 Query: 175 VGLP 178 P Sbjct: 181 CRPP 184 >gi|94266117|ref|ZP_01289832.1| Recombination protein O, RecO [delta proteobacterium MLMS-1] gi|93453314|gb|EAT03754.1| Recombination protein O, RecO [delta proteobacterium MLMS-1] Length = 255 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 65/188 (34%), Gaps = 28/188 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI------------LQAGNLV 54 A++L V SYGE + I+ R G+ G + R++ + + G Sbjct: 8 AVVLAVSSYGESDKIVTFYGRDSGKLSGIAKGANRSRIRFVNKLELFSLLELSYEPG--- 64 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R + R+ Q E+ + + + RF E +P ++ +L Sbjct: 65 RSSGLVRIDQ------AELSQPFATIRRDYHRYSAAALAGELAARFSGEGDPDGRIFQLL 118 Query: 115 NIFL----NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL---WVSPKS 167 L +C + + + E LL +G+ DL+ C G S Sbjct: 119 LWVLHTIADCTRPTLELPPCLIFFETKLLALLGYAPDLSGCRRCGTLAASARPYHFSLGQ 178 Query: 168 GGAVCRSV 175 GG +C S Sbjct: 179 GGLLCASC 186 >gi|108800416|ref|YP_640613.1| DNA repair protein RecO [Mycobacterium sp. MCS] gi|119869545|ref|YP_939497.1| DNA repair protein RecO [Mycobacterium sp. KMS] gi|126436039|ref|YP_001071730.1| DNA repair protein RecO [Mycobacterium sp. JLS] gi|119361466|sp|Q1B6C7|RECO_MYCSS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221899|sp|A3Q262|RECO_MYCSJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221900|sp|A1UIP9|RECO_MYCSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|108770835|gb|ABG09557.1| DNA replication and repair protein RecO [Mycobacterium sp. MCS] gi|119695634|gb|ABL92707.1| DNA replication and repair protein RecO [Mycobacterium sp. KMS] gi|126235839|gb|ABN99239.1| DNA replication and repair protein RecO [Mycobacterium sp. JLS] Length = 276 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 62/157 (39%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR +G + + R + L+ + V Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + + +++ + ++S +++ L ER P L+ + L Sbjct: 64 GRNLDIVT-QVQAIDAFASDIVSDYGRYTSACAVLETAERLAGEERAPMPALHRLTVGAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCV 152 S ++ + + LL+ +G LT+C Sbjct: 123 RAVADGSRPRELVL--DAYLLRAMGIAGWAPALTECA 157 >gi|239637622|ref|ZP_04678594.1| DNA repair protein RecO [Staphylococcus warneri L37603] gi|239596840|gb|EEQ79365.1| DNA repair protein RecO [Staphylococcus warneri L37603] Length = 252 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 17/195 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNL 53 M + II+ YGE + I+ ++ + R ++ +++ LQA G Sbjct: 1 MLMKQKGIIIKSVEYGESDKIITILNEYGSKVPLMAR--RAKKIKSGLQAHTQMFVYGLF 58 Query: 54 VRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + WR +G +V+ H L + + R + E E YD Sbjct: 59 IYNKWRG-----MGTLNSVDVINQHYELQLDLYESSFATLCAETIDRSMEEDEISKYNYD 113 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGA 170 +LN L + + + L + GF +CV++G + L+ S K GA Sbjct: 114 LLNFVLTKISSGQSAQLMSIIVLLKCMNKFGFSALFNQCVISGNSDQSKLVGYSFKFDGA 173 Query: 171 VCRSVGLPYAEKMLV 185 + ++V + + Sbjct: 174 ISQAVAYQDPHALQL 188 >gi|305666028|ref|YP_003862315.1| DNA repair protein [Maribacter sp. HTCC2170] gi|88710803|gb|EAR03035.1| DNA repair protein [Maribacter sp. HTCC2170] Length = 239 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 21/172 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-QSHRMQ---PILQAGNLVRV 56 M AI+L YG+ ++I++ T G ++ S + + Q + + Sbjct: 1 MQVTTKAIVLSSLKYGDTSLIVKAFTLSDGLKSYLLKGVLASRKGKLKTAYFQPLTQLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLE----SHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLEL 110 +A + + E + +H + L S + + + L + E E L Sbjct: 61 -----VANHKNKGTLESIREARVTHQYQTLHSDISKNAITLFLSEMLANSIQEEERNEGL 115 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW 162 + + L + + + L K +GF D T T+ L + Sbjct: 116 FYYMESALQWLDANTEANNFHIYFLIDLTKYLGFYPD------TTSTEGLYF 161 >gi|227488411|ref|ZP_03918727.1| DNA repair protein RecO [Corynebacterium glucuronolyticum ATCC 51867] gi|227091625|gb|EEI26937.1| DNA repair protein RecO [Corynebacterium glucuronolyticum ATCC 51867] Length = 241 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 77/241 (31%), Gaps = 34/241 (14%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 +++ A+I+ +GE + I+ +TR G G + + + R LQ + V ++ Sbjct: 6 YRERAVIVRTYDFGEADRIVVFLTRTRGIVRGVAKGVRRANSRFGSRLQPFVELDVQFYK 65 Query: 60 SR-LAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFL--PEREPCLELYDMLN 115 R L G + +L+ + + + E E +YD + Sbjct: 66 GRNLESVTGADTV----TFFGRLIDDYPRYTAASTVLETAEKVSLGAESE---GVYDRVL 118 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L V+ + L ++ ++G+ L C G +GGA+C Sbjct: 119 NALAELNETGVVTPVLDAFLLHIMSDVGWPPSLFDCAQCGAPGPHEVFHAGAGGALCERC 178 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 LP T D ++L +Q + R + Sbjct: 179 RLP--------------GSATPDPETLHLMWQYM------HVGAPAAAGQPTARISEAHA 218 Query: 236 L 236 L Sbjct: 219 L 219 >gi|595944|gb|AAA56763.1| RecO [Haemophilus influenzae] Length = 99 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 8 GFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKS 65 >gi|307152071|ref|YP_003887455.1| DNA repair protein RecO [Cyanothece sp. PCC 7822] gi|306982299|gb|ADN14180.1| DNA repair protein RecO [Cyanothece sp. PCC 7822] Length = 283 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 12/162 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 +Q IIL GE + ++ ++T +YG + H+ + L N + + Sbjct: 5 YQATGIILKGMPLGESDRLVTILTSEYGLIRAVAPGARKHKSRLRGRAELFVVNQLLIV- 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 + R + + + E LES+ L L Q I L L +P +ELY++LN Sbjct: 64 KGRSLEKI--IQAETLESYPG-LSRDLGKLTVSQYIAELVLSLALSEQPQIELYELLNEH 120 Query: 118 L---NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L P + Q LL G C +T Sbjct: 121 LRRIEQLSTPQSLYAHLAQAVYHLLAIAGVAPVFHSCCLTHQ 162 >gi|218439778|ref|YP_002378107.1| DNA repair protein RecO [Cyanothece sp. PCC 7424] gi|226737858|sp|B7K8P1|RECO_CYAP7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218172506|gb|ACK71239.1| DNA repair protein RecO [Cyanothece sp. PCC 7424] Length = 283 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 20/185 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 +Q IIL GE + ++ ++T +YG V + H+ + L N + + Sbjct: 5 YQATGIILKGMPLGEADRLVTILTSEYGLIQAVVPGARKHKSRLRGRSELFVVNQLLIV- 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE-REPCLELYDMLNIF 117 + R L + E LES+ L L Q + L L +P +ELY++LN Sbjct: 64 KGRSLDKL--IQAETLESYPG-LSRDLGKLTASQYLAELVLSLALCEQPQIELYELLNEH 120 Query: 118 LNCHKI---PSVIGKIFVQIELMLLKNIGFGLDLTKCVV------TGVTQDLLWV--SPK 166 L + P + Q LL G + +C + T L V S + Sbjct: 121 LRRIEQKATPQTLYPHLAQAVFHLLAIAGVAPQVYQCCLSREPIETNFIDSLWRVGFSFE 180 Query: 167 SGGAV 171 SGGA+ Sbjct: 181 SGGAI 185 >gi|153815602|ref|ZP_01968270.1| hypothetical protein RUMTOR_01838 [Ruminococcus torques ATCC 27756] gi|317502139|ref|ZP_07960317.1| DNA repair protein RecO [Lachnospiraceae bacterium 8_1_57FAA] gi|331090349|ref|ZP_08339232.1| DNA repair protein RecO [Lachnospiraceae bacterium 3_1_46FAA] gi|145847033|gb|EDK23951.1| hypothetical protein RUMTOR_01838 [Ruminococcus torques ATCC 27756] gi|316896456|gb|EFV18549.1| DNA repair protein RecO [Lachnospiraceae bacterium 8_1_57FAA] gi|330401304|gb|EGG80892.1| DNA repair protein RecO [Lachnospiraceae bacterium 3_1_46FAA] Length = 255 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 24/201 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV----NWRSRL 62 I+L GE + + ++T++ G+ F R + P++ A N + R Sbjct: 17 GIVLSTMPVGEYDRRVVILTKEQGKISAFARGAR-RPNSPLVGALNPFSFGTFTMYEGRT 75 Query: 63 AQNLGEFRFE--VLESHCAKLLSSSLFL-YGLQSIVPLF----RFLPEREPCLELYDMLN 115 + + + ++ A+L + YG + F ERE LY L Sbjct: 76 -----SYTIQSASISNYFAELRGDIIGAYYGFYFLEFTDYYTKEFNDEREMLKLLYQTLR 130 Query: 116 IFLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 N H I + ++ EL L G + +C+ G + S GG VC Sbjct: 131 ALTNPH-----IPNMLIRYIFELKALTINGQAPQVFQCMTCGNKERHAVFSAVKGGLVCS 185 Query: 174 SVGLPYAEKMLVLPSFLWKEE 194 + M + PS L+ + Sbjct: 186 ECMKDVRDGMSLDPSTLYSMQ 206 >gi|84390106|ref|ZP_00991368.1| DNA repair protein RecO [Vibrio splendidus 12B01] gi|86146357|ref|ZP_01064681.1| DNA repair protein RecO [Vibrio sp. MED222] gi|84376760|gb|EAP93635.1| DNA repair protein RecO [Vibrio splendidus 12B01] gi|85835836|gb|EAQ53970.1| DNA repair protein RecO [Vibrio sp. MED222] Length = 207 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 17/131 (12%) Query: 37 RNGQSHR--MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI 94 + +S R ++ LQ + + W G + A+ +S L L G+ Sbjct: 3 KGARSKRSNLKGALQPFTPLLLKWSGN-----GSMK----TLRQAEPISLGLPLAGINLY 53 Query: 95 VPLF------RFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 ++ R L + L + EL LL +G+G+D Sbjct: 54 SAMYVNELVGRVLMAEVAMPAFFHDYLHALTELAHNENPEPALRRFELALLSAMGYGVDF 113 Query: 149 TKCVVTGVTQD 159 C TG D Sbjct: 114 LHCAGTGEAID 124 >gi|300933268|ref|ZP_07148524.1| DNA repair protein RecO [Corynebacterium resistens DSM 45100] Length = 231 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 12/177 (6%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WRSRLAQN 65 +L GE ++IL ++TR +G+ G + + + + L V V + R Sbjct: 1 MLRTYRLGEADLILVLLTRDHGQVRGVAKAIRKSKSRFGAKLDRFTRVNVQIYPGR---G 57 Query: 66 LGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN--CHK 122 L + +ES+ + +++ + + + + + + ++ +L+ L Sbjct: 58 LANITDADAVESYASPIVADPDRYFAGCAALEVAQLFGGED--SSVFSLLDATLRDLAIH 115 Query: 123 IPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 PS+ V + L L+ G+ L C G T P +GGAVC + P Sbjct: 116 EPSLPLVNIVDRFVLHCLEIAGWAPSLVNCAQCGKTGPHRAFHPMAGGAVCVNCRPP 172 >gi|152995277|ref|YP_001340112.1| DNA repair protein RecO [Marinomonas sp. MWYL1] gi|150836201|gb|ABR70177.1| DNA repair protein RecO [Marinomonas sp. MWYL1] Length = 245 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 59/148 (39%), Gaps = 10/148 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV--RVNWRSR 61 + A ++ R + + I+L+++T + G G R + + + G + + + R Sbjct: 2 RVSAYVIHTRPFQDSKILLDMLTLEQGLIRGVWR---LPKKEARVIPGPFLCYEMEFTGR 58 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + LES + L LY L L + LP P +++++ + Sbjct: 59 SD----LKTVKSLESIKSASSLDGLPLYAALYVHELLEKLLPINLPLPDVFELYKWLIEN 114 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL 148 + I + + E+ L +G G+++ Sbjct: 115 LHAGAPIAPLLRRFEVGLFSELGVGINM 142 >gi|220912716|ref|YP_002488025.1| DNA repair protein RecO [Arthrobacter chlorophenolicus A6] gi|219859594|gb|ACL39936.1| DNA repair protein RecO [Arthrobacter chlorophenolicus A6] Length = 250 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 76/213 (35%), Gaps = 21/213 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++DDA++L GE + I+ ++T+++G+ + + S R L+ +V + Sbjct: 11 YRDDAVVLRTHKLGEADRIITLLTKRHGQVRAVAKGVRRTSSRFGARLEPFMVVDLQLIS 70 Query: 60 SRLAQ------NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R G + S A ++ ++ L + E Y++ Sbjct: 71 GRSLDIVTQAVAKGAYG----GSIAADYGRYTVAAAMTETAEKLTDV--DGEAATAQYNL 124 Query: 114 LNIFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L + G I L L G+ T C G+ + GG VC Sbjct: 125 LVGALAALSRDEHAAGLILDSYLLRALATGGWAPSFTDCARCGMPGPHRAFATALGGMVC 184 Query: 173 RSVG-----LPYAEKMLVLPSFLWKEEQTIDAD 200 P AE +++L + L + T DA Sbjct: 185 PDCRPPGSPAPAAETVILLAALLTGDWPTADAS 217 >gi|319952749|ref|YP_004164016.1| DNA repair protein reco [Cellulophaga algicola DSM 14237] gi|319421409|gb|ADV48518.1| DNA repair protein recO [Cellulophaga algicola DSM 14237] Length = 239 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 58/160 (36%), Gaps = 15/160 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-QSHRMQ---PILQAGNLVRV 56 M AI+L YG+ ++I+++ T G ++ S + + Q + + Sbjct: 1 MQVTTKAIVLSALKYGDTSLIVKIFTASDGLKSYLLKGVFASKKGKLKTAYFQPLMQLEL 60 Query: 57 NWRSRLAQNLGEFRFEVLE----SHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLEL 110 +A + + E + S+ + L + + L + L + E E L Sbjct: 61 -----VAYHKNKGTLETVREAKPSYHYQSLHTDITKNALTFFLAEMLSNSIQEEEDNANL 115 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 ++ L L I + ++L K GF D T+ Sbjct: 116 FEFLEASLQWLDANEEISNFHLYFLILLTKYFGFYPDATE 155 >gi|255327483|ref|ZP_05368550.1| DNA repair protein RecO [Rothia mucilaginosa ATCC 25296] gi|255295377|gb|EET74727.1| DNA repair protein RecO [Rothia mucilaginosa ATCC 25296] Length = 283 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 6/158 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-R 59 W+D A+IL + GE + I+ ++TR G + + + L+ +++ R Sbjct: 7 WRDAALILRTQKLGETDRIIIMLTRDGGITHAVAKAVRKPTSKFGGRLEPFMHTDLSFSR 66 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFL 118 R + + L ++ A ++++ +I L L + + ++Y + + L Sbjct: 67 GRTNLHT-ITQAATLHAYTAPIMANYNAYTCASTIAELAEALTKDTDSTADIYTLTHGAL 125 Query: 119 NCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG 155 + +I + + G+ L C G Sbjct: 126 AALAHGQHVPQRILTRYLARSMNAAGWPLIGENCTRCG 163 >gi|332652576|ref|ZP_08418321.1| DNA repair protein RecO [Ruminococcaceae bacterium D16] gi|332517722|gb|EGJ47325.1| DNA repair protein RecO [Ruminococcaceae bacterium D16] Length = 251 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 10/187 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ A++L +Y E + IL ++T++ G+ R R L AG+ + V W Sbjct: 3 MHLHTKALVLRETAYKESDKILTLLTQEQGKITASARG--CRRKGSPLAAGSQLLV-WSD 59 Query: 61 R-LAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQS-IVPLFRFLP-EREPCLELYDMLNI 116 L + G + E + + L + L + + L E P EL ++ Sbjct: 60 FILYEYQGRWSVKEAEVEREFRGMREDLDKFSLGCYFGEVTQALALEGLPSPELLSLILN 119 Query: 117 FLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ V+ EL + G+ L C V G + + G C Sbjct: 120 SLHALDRLD-RPLALVKGAFELRAMCLAGYEPVLDACAVCGCQPEEPRFHLREGVLHCAR 178 Query: 175 VGLPYAE 181 + Sbjct: 179 CRGEVGD 185 >gi|148360407|ref|YP_001251614.1| DNA repair protein RecO [Legionella pneumophila str. Corby] gi|296106526|ref|YP_003618226.1| DNA repair protein RecO (recombination protein O) [Legionella pneumophila 2300/99 Alcoy] gi|254764638|sp|A5IFW8|RECO_LEGPC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148282180|gb|ABQ56268.1| DNA repair protein RecO [Legionella pneumophila str. Corby] gi|295648427|gb|ADG24274.1| DNA repair protein RecO (recombination protein O) [Legionella pneumophila 2300/99 Alcoy] Length = 229 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 8/154 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ TR+ G + G++ + Q +LQA + V+ R Q Sbjct: 8 AWVIHKQWSGDTSARLKLFTREMGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQ-- 65 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK--- 122 + +ES ++L L+ GL L+ L P +L+D LN Sbjct: 66 --YYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAR 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 VI + + E LLK G+ TG Sbjct: 124 EREVIEALLRRFEWALLKACGYTFSFLHEARTGE 157 >gi|261416565|ref|YP_003250248.1| DNA repair protein RecO [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373021|gb|ACX75766.1| DNA repair protein RecO [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327326|gb|ADL26527.1| putative DNA repair protein RecO [Fibrobacter succinogenes subsp. succinogenes S85] Length = 263 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 70/193 (36%), Gaps = 24/193 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 AI+L Y + + I++ +T + G V+ G+ + L L V +R Sbjct: 6 AIVLHRFPYSDSSFIVKALTEESGIVSFIVKGGKKKESPFRGALDPLALSEVVFRQNPNT 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLNCH-- 121 +L + L L + L Q + + R+ P+ P E ++ L ++ Sbjct: 66 DLQFIKEATLLDWRKNLRNDLLSTAKAQVMTEMILRYAPQGVPLQEEFERLEQAISEFDS 125 Query: 122 KIPSVIG-----------------KIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLW 162 P +IF Q L G+ LDLT C G T + Sbjct: 126 DSPQDSPTPEGSAHSSTSSVPDKSRIFAQWLLDTCDMWGYNLDLTTCSRCGHTLEEPAAD 185 Query: 163 VSPKSGGAVCRSV 175 P++GG VC++ Sbjct: 186 FFPETGGFVCQAC 198 >gi|120404781|ref|YP_954610.1| DNA repair protein RecO [Mycobacterium vanbaalenii PYR-1] gi|119957599|gb|ABM14604.1| DNA replication and repair protein RecO [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 64/173 (36%), Gaps = 21/173 (12%) Query: 1 MYW--------QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQA 50 M W +D A++L GE + I+ ++TR +G + + R + L+ Sbjct: 1 MQWETGPMRLYRDRAVVLRQHKLGEADRIVSLLTRDHGLVRAVAKGVRRTRSKFGARLEP 60 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCL 108 + V ++ + + +++ + ++S +++ + ER P Sbjct: 61 FAHIDVQLHPGRNLDIVT-QVQAIDAFASDIVSDYGRYTCACAMLETAERIAGEERAPVP 119 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFG------LDLTKCVVTG 155 L+ + L + ++ + + LL+ +G ++ +C G Sbjct: 120 ALHKLTVAALRAVADGTRPRELVL--DAYLLRAMGVAGWAPSLIECARCAAPG 170 >gi|154509426|ref|ZP_02045068.1| hypothetical protein ACTODO_01957 [Actinomyces odontolyticus ATCC 17982] gi|153799060|gb|EDN81480.1| hypothetical protein ACTODO_01957 [Actinomyces odontolyticus ATCC 17982] Length = 245 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 20/188 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-R 59 ++D+AI+L GE + I+ ++T ++G+ + + + ++ +++ R Sbjct: 4 YRDEAIVLRTHKLGEADRIITLLTAEHGQVRAVAKGVRKTTSKFGARVEPFSVIDAQLHR 63 Query: 60 SRLAQNLGEFR--FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R L + + ++ A +++ L + + + Sbjct: 64 GRTLDTLTQVASIVQYGDAIAANYDLYLAATVVVETAERLTA-----DAHDGTHSQYLLL 118 Query: 118 LNCH-------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L P++I + L L G+ C V G S GG Sbjct: 119 LGALNALARGRHDPTLIRTSYT---LRALALAGWAPSCFDCAVCGTQGPHTSFSIPDGGT 175 Query: 171 VCRSVGLP 178 VC + P Sbjct: 176 VCDTCRPP 183 >gi|94502129|ref|ZP_01308630.1| DNA repair protein RecO [Oceanobacter sp. RED65] gi|94425731|gb|EAT10738.1| DNA repair protein RecO [Oceanobacter sp. RED65] Length = 244 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 9/144 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH-RMQPILQAGNLVRVNWRSRL 62 + A +L R Y E + +++ T YG R + + Q LQ L + + Sbjct: 3 KQRAYLLHSRPYKETSALVDFFTPDYGHIRCMARGVKKANKYQQPLQPFTLYTIFFHG-- 60 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL---PEREPCLELYDMLNIFLN 119 L + S L + LF G L R L E E L+D L Sbjct: 61 DSGLKNLDKFEIFSLPLNLSGNPLF-SGFYINEVLLRALRSDAEVESQS-LFDAYEDVLA 118 Query: 120 CHKIPSVIGKIFVQIELMLLKNIG 143 + + + EL LL+++G Sbjct: 119 SLNSEGLELSLRL-FELSLLEHMG 141 >gi|118444042|ref|YP_878551.1| DNA repair protein RecO [Clostridium novyi NT] gi|171472989|sp|A0Q1P9|RECO_CLONN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118134498|gb|ABK61542.1| DNA repair protein RecO [Clostridium novyi NT] Length = 256 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 11/180 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQA---GNLVRVN 57 ++ A+IL + Y E + ++ + T + G+ + + + + I Q G V Sbjct: 9 FKTKALILKTQDYKENDKLVWLFTEKIGKVCAIAKGAKKSKSKFIASTQTFCFGEYVLYR 68 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 +S + N E+++S + L YG + L + + EL+ Sbjct: 69 GKSLYSIN----EVEIIDSFQSLLSDMDTITYGSYFCELILIALEQEQSDRELFKDFIKS 124 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSV 175 K ++ +I + EL LLK G+G D KC + G ++S + G VC + Sbjct: 125 FYFLKNQAMDLEILARTFELKLLKATGYGFDFEKCCICGKRINKTNYLSIQYYGGVCDNC 184 >gi|194337771|ref|YP_002019565.1| DNA repair protein RecO [Pelodictyon phaeoclathratiforme BU-1] gi|238693422|sp|B4SGW0|RECO_PELPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194310248|gb|ACF44948.1| DNA repair protein RecO [Pelodictyon phaeoclathratiforme BU-1] Length = 261 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 24/204 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + A+IL Y +++ I + TR++G+ ++ ++ + + + AGN+V + Sbjct: 1 MIVKTRAVILREIKYRDQSKICSIYTREFGKMSIIIKGARNPKNRLSGLFSAGNVVDLVL 60 Query: 59 RSRLAQNL-----GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-CLELYD 112 + ++++ G + L I+ R E + L L+ Sbjct: 61 YKKSSRDIQLATDGNLVLSPMVPEP-----DLERFAILYRIIDFVRHTTENDEKNLPLFT 115 Query: 113 MLNIFLNCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVT----------QDLL 161 +L L +V +++ L + +GF L CV +G +L Sbjct: 116 LLTGTLEQLYHTNVNFQQLYAWFLLRFVSLLGFQPSLRTCVFSGEELLPAIEALQLTELY 175 Query: 162 WVSPKSGGAVCRSVGLPYAEKMLV 185 +V G A+ ++ G A+K L+ Sbjct: 176 FVMNPGGLALPKAAGSSLAKKQLI 199 >gi|326316029|ref|YP_004233701.1| DNA repair protein RecO [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372865|gb|ADX45134.1| DNA repair protein RecO [Acidovorax avenae subsp. avenae ATCC 19860] Length = 260 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 11/139 (7%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR--- 59 + A +L + E ++IL+V TR +GR + + +P+L +RV + Sbjct: 9 EPAYVLHRYDWSESSLILDVFTRHHGRVALVAKGAKKPTSNFRPVLLPLQPLRVTYTLNG 68 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + G E + H + L GL L R L + L+D + Sbjct: 69 EGREEVH-GLKGAEWVGGHVMP--TGDALLSGLYLNELLMRLLAREDTHAALFDAYAGVV 125 Query: 119 NCH--KIPSVIGKIFVQIE 135 + + + E Sbjct: 126 RVLASEHGDALEPVLRSFE 144 >gi|260578245|ref|ZP_05846161.1| DNA repair protein RecO (recombination protein O) [Corynebacterium jeikeium ATCC 43734] gi|258603547|gb|EEW16808.1| DNA repair protein RecO (recombination protein O) [Corynebacterium jeikeium ATCC 43734] Length = 253 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 13/186 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D+A +L GE ++IL ++T+ G + + R + L + V V + Sbjct: 9 FRDEAFVLRTYKLGEADLILVLLTKDNGLIRAVAKGIRKTRSRFGARLDRFSCVDVQIYP 68 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE--LYDMLNIF 117 R N+ + + ++ + +++ Y +++ + + EP ++ +L+ Sbjct: 69 GRSLANVTDAAT--VATYASPIVADVDRFYAGAAMLEMAQVFA-AEPSSARSIFFLLDAA 125 Query: 118 LNCHKIP---SVIGKIFVQIELML--LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + V E +L L+ G+ L C G P +GGAVC Sbjct: 126 LQQLATQLTTPALPPVSVADEFVLHGLEVAGWEPSLVDCAQCGKRGPHRAFHPGAGGAVC 185 Query: 173 RSVGLP 178 + P Sbjct: 186 VTCRPP 191 >gi|78189922|ref|YP_380260.1| recombination protein O, RecO [Chlorobium chlorochromatii CaD3] gi|78172121|gb|ABB29217.1| DNA replication and repair protein RecO [Chlorobium chlorochromatii CaD3] Length = 283 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 8/155 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQ 64 A++L ++ +++ I + +R +GR ++ ++ + + + AGN++ V + + Sbjct: 29 AVVLRETNFRDQSRICSLYSRDFGRLSVIIKGARNPKNRLCGLFSAGNILDVVIYRKSGR 88 Query: 65 NLGEFRFEVLESHCAKLLSSS--LFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNCH 121 L + L++ L I+ + + E E +L+ +L L Sbjct: 89 ELQLAS--DATLVASPLMAEPDMERFAALYRIIDVVKQATAEHEHNPQLFTLLAATLQSL 146 Query: 122 KIPSVIGKIFVQI-ELMLLKNIGFGLDLTKCVVTG 155 + L L+ +GF L +CV + Sbjct: 147 YQQGSNNLLLTAWFLLRLVSLLGFQPSLRQCVFSN 181 >gi|268611991|ref|ZP_06145718.1| DNA replication and repair protein RecO [Ruminococcus flavefaciens FD-1] Length = 255 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 17/183 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 + I+L RS GE++ ++++TR G V+ + + Q R R Sbjct: 13 EGIVLRERSVGEQDKFIDILTRDRGVLEASVKGARKINGKSGSSSQLFAYSRFCLDQR-- 70 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRF--LPEREPCLELYDMLNIFLNC 120 +N+ E L L S + + RF +PE + D+L + LNC Sbjct: 71 RNMLYLNSAEPLH-IFYGLRDSLTKISLASYFSEVLRFCVIPEAQNN----DILRLTLNC 125 Query: 121 HK--IPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 + + F++ EL L+ IGF D+ C G + + ++ S GG C Sbjct: 126 LHYLEKNERSEEFLKAVFELRLMSEIGFMPDIVACRECGTFEPEEIFFSITDGGFYCSDC 185 Query: 176 GLP 178 Sbjct: 186 FGE 188 >gi|169632756|ref|YP_001706492.1| DNA repair protein [Acinetobacter baumannii SDF] gi|169151548|emb|CAP00315.1| DNA repair protein [Acinetobacter baumannii] Length = 236 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 7 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN------ 119 + E+L + + L IV R P E + ++ + L Sbjct: 61 --FTKLEILNQPVFFFCDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLF 116 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ +D + Sbjct: 117 SHENPDLFLRQILRQFEHILLAELGYAIDFS 147 >gi|225021780|ref|ZP_03710972.1| hypothetical protein CORMATOL_01808 [Corynebacterium matruchotii ATCC 33806] gi|224945476|gb|EEG26685.1| hypothetical protein CORMATOL_01808 [Corynebacterium matruchotii ATCC 33806] Length = 263 Score = 55.5 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 13/184 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 +++ A+++ GE + I+ +T+ G G + + R + LQ + V + Sbjct: 6 YRECALVIRTYDLGEADRIIVFLTQHRGLVRGVAKGVRRTRSRFGSRLQPFVELDVQFYV 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRF-LPEREPCLELYDMLNIF 117 R + + + + + ++ + + R L E LY + Sbjct: 66 GRELE--SVTAADTVGFYGSGIIDNITCYTAASAVLEAAERLSLAHDEHDDRLY---PLV 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 ++ K + ++++ LL+ + G+ L C P++GGAVC + Sbjct: 121 VDTLKQLQHAPEPKLRLDTFLLQAMTVAGWAPSLYYCAQCQAPGPHHAFHPRTGGAVCGT 180 Query: 175 VGLP 178 P Sbjct: 181 CRPP 184 >gi|241668235|ref|ZP_04755813.1| DNA repair protein RecO [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876770|ref|ZP_05249480.1| DNA repair protein recO [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842791|gb|EET21205.1| DNA repair protein recO [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 233 Score = 55.5 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 18/163 (11%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL Y E ++++ + TR++G+ G +R + + + Q LV++ + ++ + Sbjct: 8 YILHQCKYQENSLLVSIFTREFGKISGLIR--VNKKTINLYQP--LVKLRGQISLAKKSD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 L + E +ES + L L + ++ L + E E L++ L Sbjct: 64 GLSKIYNVEFVESFYQNTYINLLSLQYMNELIYLLLSYSHEEE---FLFEKYGFILKNIN 120 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG--VTQDLLW 162 + K ++ EL LL ++G G+ + C + G + + L + Sbjct: 121 E--INYKYLLRMFELELLDSLGQGIYVD-CDIDGMLIDESLNY 160 >gi|226951497|ref|ZP_03821961.1| recombinational DNA repair protein (RecF pathway) [Acinetobacter sp. ATCC 27244] gi|226837790|gb|EEH70173.1| recombinational DNA repair protein (RecF pathway) [Acinetobacter sp. ATCC 27244] Length = 235 Score = 55.5 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R + QPI ++ +S L Sbjct: 8 HGYLIHHRRYREKSHIVHLFTQEYGRVDGILRQIPPPQYQPI-----RLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-------DMLNIFL 118 + E+L F G + R P E + + L + Sbjct: 62 --LTKLEILNQ--PVFFHGDAFFAGFYLNEIVLRLCPLEEAMPQTFQQYQLILLQLQLLA 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 P + +I Q E +LL+ +G+ +D + Sbjct: 118 THEHAPLFLRQILRQFEHVLLQELGYAIDFS 148 >gi|315127395|ref|YP_004069398.1| DNA repair protein recO (recombination protein O) [Pseudoalteromonas sp. SM9913] gi|315015909|gb|ADT69247.1| DNA repair protein recO (recombination protein O) [Pseudoalteromonas sp. SM9913] Length = 230 Score = 55.5 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 9/147 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYG--RHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A +L R Y + ++L+++ G R L V Q+ + + LQ + V++ + Sbjct: 8 AYLLHRRPYSDSQVMLDMLVEGVGQLRMLARVSGRQATKYKAQLQPFQALLVHYNGKYD- 66 Query: 65 NLGEF-RFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L +FE+ H L + LY G R +P EP +++ + L Sbjct: 67 -LKYINKFEL---HGNPLFLTGDKLYCGFYLNELTNRIVPINEPIDQVFQLYKTHLENLN 122 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + E LL+ +G+G+D + Sbjct: 123 SGTDMQAVLRSYEFQLLELLGYGVDFS 149 >gi|76787396|ref|YP_328746.1| DNA repair protein RecO [Streptococcus agalactiae A909] gi|92087036|sp|Q3K407|RECO_STRA1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|76562453|gb|ABA45037.1| DNA repair protein RecO [Streptococcus agalactiae A909] Length = 253 Score = 55.5 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 14/173 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR------S 60 ++L R+Y E + ++++ T G+ + FV++ + +LQ + + S Sbjct: 8 GLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLS 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 + F+ + S L I L + + +L+ L L Sbjct: 68 YIDDYKEVLAFQEINS-------DLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + E+ LL+ G L+ CV S K G +C Sbjct: 121 LIEDGLDYEILTNIFEVQLLERFGVALNFHDCVFCHRAGLPFDFSHKYSGLLC 173 >gi|299530661|ref|ZP_07044076.1| DNA repair protein RecO [Comamonas testosteroni S44] gi|298721177|gb|EFI62119.1| DNA repair protein RecO [Comamonas testosteroni S44] Length = 259 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 8/158 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 + A IL + E ++ILEV TR GR + + H +P+L +++++ Sbjct: 10 EPAYILHQYDWSESSLILEVFTRHRGRVALAAKGVKRHTSNFRPVLLPLQPLKLSYTLGA 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFL--- 118 N + E ++ L G+ L R L +P L+D+ + Sbjct: 70 EGNAEIHSLKGAEWVGGHVMPQGDALWSGMYLNELLLRLLARDDPYTALFDIYAGVVRVL 129 Query: 119 --NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 I + EL+LL+ +G DL + T Sbjct: 130 AGQHGGTTEAIEPVLRAFELVLLRELGHLPDLRQESAT 167 >gi|326203515|ref|ZP_08193379.1| DNA repair protein RecO [Clostridium papyrosolvens DSM 2782] gi|325986335|gb|EGD47167.1| DNA repair protein RecO [Clostridium papyrosolvens DSM 2782] Length = 253 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 70/176 (39%), Gaps = 11/176 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-----WRSR 61 +++ + GE + I+ V+T + G+ +N R + L AG+ + ++ + Sbjct: 12 GLVIREVNTGEADKIITVLTAEEGKISIAAKNA--RRAKSSLSAGSQLFAYSEYMLFKGK 69 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 N+ +V+E + Y + + + E EP E+ +L L Sbjct: 70 ELYNMSS--CQVIEPNYEIRNDIEKLTYCSHILELISDNVQEGEPSEEVLRLLLNTLYVI 127 Query: 122 KIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQD-LLWVSPKSGGAVCRSV 175 + K+ V EL L+ +G+ + CV G QD ++ S G VC+ Sbjct: 128 SKTNRPLKLITVVFELRLMSLLGYEPHVISCVNCGKAQDESMYFDFDSSGLVCKDC 183 >gi|238020903|ref|ZP_04601329.1| hypothetical protein GCWU000324_00798 [Kingella oralis ATCC 51147] gi|237867883|gb|EEP68889.1| hypothetical protein GCWU000324_00798 [Kingella oralis ATCC 51147] Length = 300 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 5/142 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R +GR R+ ++ ++ +L + +W + + Sbjct: 64 FLLTALPWRENSLRVEAFSRDFGRVSLLARSARTRGSELRGVLLPFVPISASWFGK-EEL 122 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 R E + + + +V + + EL+ L+ L Sbjct: 123 KTVHRAEWRGGWAQPVGQRLMSALYVNELV--LKLTAREDGQPELFTALHDVLRAICTAP 180 Query: 126 VIGKIFVQIELMLLKNIGFGLD 147 E LL +GF D Sbjct: 181 HFASALRCFEWRLLTLLGFAPD 202 >gi|119961429|ref|YP_947965.1| DNA repair protein RecO [Arthrobacter aurescens TC1] gi|119948288|gb|ABM07199.1| putative DNA repair protein RecO [Arthrobacter aurescens TC1] Length = 277 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 21/214 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++DDA++L GE + I+ ++T+ +G+ + + S R L+ + + Sbjct: 38 YRDDAVVLRTHKLGEADRIITLLTKHHGQVRAVAKGVRRTSSRFGARLEPFMVADLQLVS 97 Query: 60 SRLAQ------NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R G + S A ++ ++ L + E Y++ Sbjct: 98 GRTLDIVTQAVAKGAYG----SSIAADYGRFTVAAAMTETAEKLTDA--DTESGTAQYNL 151 Query: 114 LNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L L ++ + L L G+ T+C G + GG VC Sbjct: 152 LVGALAALSRSDHPPELILDSYLLRALATGGWAPSFTECARCGRPGPHTAFAAPIGGMVC 211 Query: 173 RSVG-----LPYAEKMLVLPSFLWKEEQTIDADS 201 P E +++L + L DA Sbjct: 212 SDCRPPGSPAPAPETVVLLGALLTGNWSVADASD 245 >gi|52841178|ref|YP_094977.1| DNA repair protein RecO [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81603441|sp|Q5ZWZ0|RECO_LEGPH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52628289|gb|AAU27030.1| DNA repair protein RecO [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 229 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 8/154 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ TR+ G + G++ + Q +LQA + V+ R Q Sbjct: 8 AWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQ-- 65 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK--- 122 + +ES ++L L+ GL L+ L P +L+D LN Sbjct: 66 --YYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAR 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 I + + E LLK G+ TG Sbjct: 124 EREAIEALLRRFEWALLKACGYTFSFLHEARTGE 157 >gi|225027255|ref|ZP_03716447.1| hypothetical protein EUBHAL_01511 [Eubacterium hallii DSM 3353] gi|224955408|gb|EEG36617.1| hypothetical protein EUBHAL_01511 [Eubacterium hallii DSM 3353] Length = 245 Score = 55.1 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 16/179 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRVNWR--- 59 I+L V GE + L ++T++ G+ F R S R + + Q L+ + Sbjct: 9 GIVLSVYPVGENDRRLTILTKERGKIQVFARG--SRRPKHPLFGVTQP--LIYCEFMVTD 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIFL 118 +R L + + L +Y + + E + + ++L + Sbjct: 65 TRNYTYLNSAEC---KDYFYFLKKDLEDIYYSSYFAEVAEYFTMEGQDERNILNLLFVTF 121 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 K + + + EL +L+ GFGL +CV G + L +S + GG +C Sbjct: 122 LAMKKKLISLSLIRRIYELKILQFAGFGLQSFQCVHCGNEEHLTRISFEEGGMLCSGCA 180 >gi|145220483|ref|YP_001131192.1| DNA repair protein RecO [Prosthecochloris vibrioformis DSM 265] gi|145206647|gb|ABP37690.1| DNA replication and repair protein RecO [Chlorobium phaeovibrioides DSM 265] Length = 276 Score = 55.1 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 66/162 (40%), Gaps = 18/162 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQ 64 A++L Y +++ + + TR++G+ ++ G++ + + I AGNL+ + + Sbjct: 21 AVVLREIKYRDQSKLCTLFTREFGKLTVILKGGRNPKNRLSGIFTAGNLLDCVMYRKAER 80 Query: 65 NLGEFRFEVLESHCAKLLSSSL-------FLYGLQSIVPLFRFLPEREP-CLELYDMLN- 115 EV A LL+S + L ++ L ER+ L+L+ +L Sbjct: 81 -------EVQLLSDASLLASPMFPEADMERFGALYRMIDLVNRTTERDEKNLQLFTLLET 133 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + ++ L + +GF +L CV TG Sbjct: 134 ALREICRERGNFPLLYAWFLLRFISILGFEPELRSCVFTGRN 175 >gi|319743900|gb|EFV96290.1| recombination protein O [Streptococcus agalactiae ATCC 13813] Length = 253 Score = 55.1 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 20/208 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR------S 60 ++L R+Y E + +L++ T G+ + FV++ + +LQ + + S Sbjct: 8 GLVLYNRNYREDDKLLKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLS 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 + F+ + S L I L + + +L+ L L Sbjct: 68 YIDDYKEVLAFQEINS-------DLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ LL+ G L+ CV S K G +C + Y Sbjct: 121 LIEDGLDYEILTNIFEVQLLERFGVALNFHDCVFCHRAGLPFDFSHKYSGLLCPN--HYY 178 Query: 180 AEK----MLVLPSFLWKEEQTIDADSLK 203 ++ + +L Q+I D L+ Sbjct: 179 KDERRNHLDPNMLYLINRFQSIQFDDLQ 206 >gi|54293918|ref|YP_126333.1| DNA repair protein recO [Legionella pneumophila str. Lens] gi|81601436|sp|Q5WXW5|RECO_LEGPL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|53753750|emb|CAH15208.1| DNA repair protein recO [Legionella pneumophila str. Lens] Length = 229 Score = 55.1 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 8/154 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ TR+ G + G++ + Q +LQA + V+ R Q Sbjct: 8 AWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQ-- 65 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK--- 122 + +ES ++L L+ GL L+ L P +L+D LN Sbjct: 66 --YYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAR 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 I + + E LLK G+ TG Sbjct: 124 EREAIEALLRRFEWALLKACGYTFSFLHEARTGE 157 >gi|297571539|ref|YP_003697313.1| DNA repair protein RecO [Arcanobacterium haemolyticum DSM 20595] gi|296931886|gb|ADH92694.1| DNA repair protein RecO [Arcanobacterium haemolyticum DSM 20595] Length = 243 Score = 55.1 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 73/180 (40%), Gaps = 10/180 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++DDAI+L GE + ++ +++R +G+ + + R ++ + V V + Sbjct: 4 YRDDAIVLRTHDIGEADRVITMLSRNHGKIRAVAKGVRKTGSRFGARVEPFSHVDVQIYL 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPERE--PCLELYDMLNI 116 + + + + L S + + + Y +IV + + + +L+ +L+ Sbjct: 64 GKTLDTIS--QVDTL-SQYGRTIGRNYDAYTAASAIVEFADIINDSDSAADPQLFALLHG 120 Query: 117 FLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L ++ V L + G+G + +C GV ++ +GGAVC Sbjct: 121 ALYAVAQQVHPPELIVYSYILRSMMVAGWGFSIDECASCGVPGPHSALNIAAGGAVCDDC 180 >gi|119471907|ref|ZP_01614215.1| DNA repair protein recO (Recombination protein O) [Alteromonadales bacterium TW-7] gi|119445280|gb|EAW26570.1| DNA repair protein recO (Recombination protein O) [Alteromonadales bacterium TW-7] Length = 230 Score = 55.1 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 9/147 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A +L R Y + ++L+++ G+ R Q+ + + LQ + V++ + Sbjct: 8 AYLLHRRPYSDSQVMLDMLVEGVGQLRMIARISGRQATKHKAQLQPFQPLLVHYSGKYD- 66 Query: 65 NLGEF-RFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L +FE+ H A L S LY G R +P EP + Y++ L Sbjct: 67 -LKYINKFEL---HGAPLFLSGDELYCGFYLNELTNRIVPVNEPIEQAYELYKSHLENLN 122 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + E LL+ +G+G+D + Sbjct: 123 RGVNLQSVLRSYEFQLLELLGYGVDFS 149 >gi|120609886|ref|YP_969564.1| DNA repair protein RecO [Acidovorax citrulli AAC00-1] gi|166221879|sp|A1TLF2|RECO_ACIAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120588350|gb|ABM31790.1| DNA repair protein RecO [Acidovorax citrulli AAC00-1] Length = 260 Score = 55.1 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 11/139 (7%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR--- 59 + A +L + E ++IL+V TR +GR R + +P+L +R+ + Sbjct: 9 EPAYVLHRYDWSESSLILDVFTRHHGRVALVARGAKKPTSNFRPVLLPLQPLRITYTLNG 68 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + G E + H + L GL L R L + L+D + Sbjct: 69 EGREEVH-GLKGAEWVGGHVMP--TGDALLSGLYLNELLMRLLAREDTHAALFDAYAGVV 125 Query: 119 NCH--KIPSVIGKIFVQIE 135 + + + E Sbjct: 126 RVLASEHGDALEPVLRSFE 144 >gi|317508571|ref|ZP_07966232.1| recombination protein O [Segniliparus rugosus ATCC BAA-974] gi|316253115|gb|EFV12524.1| recombination protein O [Segniliparus rugosus ATCC BAA-974] Length = 247 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D ++L GE + I+ ++TR++G + + R + L+ + V V ++ Sbjct: 4 YRDVGVVLRNHQLGEADRIVALLTREHGLVRAVAKGVRRTRSKFGARLEPFSCVDVQLYQ 63 Query: 60 SRLAQNLGEFRF-----EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R + + E + + K + L++ L P+ P +L+ + Sbjct: 64 GRSLDVITQAATLDANSEEITADYGKY---TTGCAILETATLLAG--PQGAPAGQLHTLT 118 Query: 115 NIFLNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + I L + + G+ L C G P++GG VC Sbjct: 119 RGALAALRKGEKPRDLILAAFFLRAMGHAGWMPALADCARCGKEGPHRAFHPRAGGVVCP 178 Query: 174 SVGLP 178 P Sbjct: 179 LCRPP 183 >gi|289209106|ref|YP_003461172.1| recombination protein O RecO [Thioalkalivibrio sp. K90mix] gi|288944737|gb|ADC72436.1| Recombination protein O RecO [Thioalkalivibrio sp. K90mix] Length = 219 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 9/142 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L R+ E + +LE++T + GR VR +Q L+ + WR R Sbjct: 10 QGVVLHARALRENSRVLELLTGEAGRVAAVVRGKAGS-----VQPFVLLDLAWRGRGE-- 62 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +V E L+ + GL + R P P E L Sbjct: 63 --LPTLQVAEQQRVFPLTGRTLVCGLYLNELVLRLYPREAPIPEALPALLTAYARLAARE 120 Query: 126 VIGKIFVQIELMLLKNIGFGLD 147 + + E LL I GL+ Sbjct: 121 RADVVLRRAEWALLLPIDSGLE 142 >gi|242279454|ref|YP_002991583.1| DNA repair protein RecO [Desulfovibrio salexigens DSM 2638] gi|259563676|sp|C6BV69|RECO_DESAD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|242122348|gb|ACS80044.1| DNA repair protein RecO [Desulfovibrio salexigens DSM 2638] Length = 246 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 55/164 (33%), Gaps = 15/164 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + +IL + E ++ + ++ G F G R + L+ + V Sbjct: 1 MELTEKVVILKTGKFKENDLWVRFLSATRGVQNAFAFGGSRSRRRFGGCLEPFSQVLF-- 58 Query: 59 RSRLAQNL-GEFRF----EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + N G ++ +++ + + + ER+ ++D+ Sbjct: 59 --KTGTNKTGTYQVLQEGSLVKGYPGIRSDFRKMGLAANCFKFIESAVLERDGNRAVFDL 116 Query: 114 LNIFLNCHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L L+ + P +F + ++ G+ D T C G Sbjct: 117 LTETLDVIEEADPDDFFPLFFRAKVAF--EQGYNPDFTICAQCG 158 >gi|184155317|ref|YP_001843657.1| DNA repair protein RecO [Lactobacillus fermentum IFO 3956] gi|227514584|ref|ZP_03944633.1| recombination protein O [Lactobacillus fermentum ATCC 14931] gi|260662169|ref|ZP_05863065.1| DNA repair protein RecO [Lactobacillus fermentum 28-3-CHN] gi|238692972|sp|B2GBZ5|RECO_LACF3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|183226661|dbj|BAG27177.1| DNA repair protein RecO [Lactobacillus fermentum IFO 3956] gi|227086995|gb|EEI22307.1| recombination protein O [Lactobacillus fermentum ATCC 14931] gi|260553552|gb|EEX26444.1| DNA repair protein RecO [Lactobacillus fermentum 28-3-CHN] Length = 272 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 66/188 (35%), Gaps = 12/188 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQA---GNLVRVNWRS 60 + +I+ R Y E++++++++T + G + FVR + ++ + G+ V + Sbjct: 9 EGVIMYRRDYRERDLLVKILTDRRGPLMFFVRGAKRKGFKLASDILPFTYGSYVGIL--- 65 Query: 61 RLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L + + Y + + + E Y + LN Sbjct: 66 -ADEGLSYIVSAQETHHLTGIGADLNRNAYATYLLELVDQAFEEGRALGGWYKQVMAALN 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC--RSVGL 177 + +E+ LL G +CVV G + L S K GG +C Sbjct: 125 LINTGRDPQVVVNVLEVQLLNRFGIAPVWDRCVVCGRSDLPLDYSEKMGGMLCLHHFAED 184 Query: 178 PYAEKMLV 185 PY + Sbjct: 185 PYRFHLTP 192 >gi|37519653|ref|NP_923030.1| DNA repair protein RecO [Gloeobacter violaceus PCC 7421] gi|62287453|sp|Q7NPH1|RECO_GLOVI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|35210644|dbj|BAC88025.1| gll0084 [Gloeobacter violaceus PCC 7421] Length = 261 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 17/184 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-------SHRMQPILQAGNLVR 55 ++ I L GE ++++ ++TR+ G R + Q ++ N ++ Sbjct: 6 YRATGINLRRMPLGESDLLMTILTRENGLVRAVARGARKANARIGGRTEQFVV---NDLQ 62 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + +R R L + E L + L + + E + +LYD+L Sbjct: 63 L-YRGRSLDQL--TQAESLRTFPGLLQDLGRLTAAQYLAEGVLQEATEGQAQEDLYDLLL 119 Query: 116 IFLNCHKI--PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAV 171 + L I V LL G ++ C V+ + + S + GG V Sbjct: 120 VHLERLAATPSHQIAARLVHGVYQLLAVGGVAPEVHFCTVSHRPISAESAGFSVEGGGLV 179 Query: 172 CRSV 175 Sbjct: 180 ALEC 183 >gi|294651019|ref|ZP_06728359.1| DNA repair protein RecO [Acinetobacter haemolyticus ATCC 19194] gi|292823120|gb|EFF81983.1| DNA repair protein RecO [Acinetobacter haemolyticus ATCC 19194] Length = 235 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 17/150 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++ R Y EK+ I+ + T++YGR G +R + QPI ++ +S L Sbjct: 9 GYLIHHRRYREKSHIVHLFTQEYGRVDGILRQIPPPQYQPI-----RLQATGKSELKN-- 61 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-------DMLNIFLN 119 + E+L F G + R P E + + L + Sbjct: 62 -LTKLEILNQ--PVFFHGDAFFAGFYLNEIVLRLCPLEEAMPQTFQQYQLILLQLQLLAT 118 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 P + +I Q E +LL+ +G+ +D + Sbjct: 119 HEHAPLFLRQILRQFEHVLLQELGYAIDFS 148 >gi|239501069|ref|ZP_04660379.1| DNA repair protein RecO [Acinetobacter baumannii AB900] Length = 237 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P E + ++ + L+ Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ LD + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYALDFS 148 >gi|120599800|ref|YP_964374.1| DNA repair protein RecO [Shewanella sp. W3-18-1] gi|120559893|gb|ABM25820.1| DNA repair protein RecO [Shewanella sp. W3-18-1] gi|319425563|gb|ADV53637.1| DNA repair protein RecO [Shewanella putrefaciens 200] Length = 236 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 5/145 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L + L SLF G+ L R L + L+ + + L Sbjct: 62 LKTLTQIEAAAPAVPLSGQSLF-AGMYINELLVRTLSVQHHAEALFLIYHRALVGLAAK- 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 IEL LL+ +G L++ Sbjct: 120 FCQSQLRYIELALLQELGAMPSLSR 144 >gi|251772616|gb|EES53181.1| Recombination protein O (RecO) [Leptospirillum ferrodiazotrophum] Length = 289 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 88/262 (33%), Gaps = 38/262 (14%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + +IL Y + I+ +R+ G GF R S + G + RSRL+ Sbjct: 5 EVLILRSGRYLDSAKIVTFFSREGGLGTGFARGATSRDNRF----GASLEPLTRSRLSLR 60 Query: 66 LGEFRFEVLESHC------AKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYD----ML 114 G H ++ + L IV L FLPE P L+ L Sbjct: 61 RGTLAGLARILHADVIASYPRIRTDYDRLVWAGLIVRFLLGFLPESHPEPSLFALACGAL 120 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL---------WVSP 165 + P+ + + F + L LL G+G+ C G T + Sbjct: 121 DRLDGRVGPPAAVWEGFARQALALL---GWGIPAAVCRRCGRTGGEKEEREEAESHYFRA 177 Query: 166 KSGGAVCRSV------GLPYAEKMLVLPSFLWKEEQTIDADSLKSA----FQLTDYFLNK 215 G CRS G + + VL + L + ++D D L + FL++ Sbjct: 178 SDGAVFCRSCRLAEGGGELWGVEAEVL-NALSRNGGSVDEDVLSPGPGPLLRERLAFLDR 236 Query: 216 YALQHNIIHCHLLRENFLGKLL 237 +H + F+G + Sbjct: 237 VIGEHLPRWTPVAELTFVGSAI 258 >gi|307609737|emb|CBW99248.1| DNA repair protein recO [Legionella pneumophila 130b] Length = 229 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 8/154 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ T++ G + G++ + Q +LQA + V+ R Q Sbjct: 8 AWVIHKQWSGDTSARLKLFTKELGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQ-- 65 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK--- 122 + +ES ++L L+ GL L+ L P +L+D LN Sbjct: 66 --YYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAR 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 I + + E LLK G+ TG Sbjct: 124 EREAIEALLRRFEWALLKACGYTFSFLHEARTGE 157 >gi|22536205|ref|NP_687056.1| DNA repair protein RecO [Streptococcus agalactiae 2603V/R] gi|25010094|ref|NP_734489.1| DNA repair protein RecO [Streptococcus agalactiae NEM316] gi|42559476|sp|Q8E2G8|RECO_STRA5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|42559477|sp|Q8E7X6|RECO_STRA3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|22533023|gb|AAM98928.1|AE014192_4 recombination protein O [Streptococcus agalactiae 2603V/R] gi|23094445|emb|CAD45664.1| Unknown [Streptococcus agalactiae NEM316] Length = 253 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 8/202 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R+Y E + ++++ T G+ + FV++ + +LQ + + L Sbjct: 8 GLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKI-NDNGL 66 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 + S L I L + + +L+ L L + Sbjct: 67 SYIDDYKEVLAFQETNSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGL 126 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK--- 182 + E+ LL+ G L+ CV S K G +C + Y ++ Sbjct: 127 DYEILTNIFEVQLLERFGVALNFHDCVFCHRVGLPFDFSHKYSGLLCPN--HYYKDERRN 184 Query: 183 -MLVLPSFLWKEEQTIDADSLK 203 + +L Q+I D L+ Sbjct: 185 HLDPNMLYLINRFQSIQFDDLQ 206 >gi|193211824|ref|YP_001997777.1| DNA repair protein RecO [Chlorobaculum parvum NCIB 8327] gi|238692677|sp|B3QRD3|RECO_CHLP8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|193085301|gb|ACF10577.1| DNA repair protein RecO [Chlorobaculum parvum NCIB 8327] Length = 260 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 18/167 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNW 58 M + A++L Y +++ I ++TR+YG+ ++ G+S + + + GNL+ Sbjct: 1 MIVKTRAVVLRDIKYRDQSKICLLLTREYGQVSVILKGGRSAKSKTGMLFSPGNLIDAVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--------PEREPCLEL 110 + ++L L S + + S L+ L+R L PE E + L Sbjct: 61 YKKGNRDL------QLASDASLVKSPLSETPDLERFSVLYRVLDLVRYASGPE-EKNVPL 113 Query: 111 YDMLNIFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + ++ + I L L+ +GF L +CV + Sbjct: 114 FTLVAATIERLCDTERDFQPILAGFLLRLVSVLGFTPALKRCVFSNY 160 >gi|212636521|ref|YP_002313046.1| Recombination protein O, RecO [Shewanella piezotolerans WP3] gi|212558005|gb|ACJ30459.1| Recombination protein O, RecO [Shewanella piezotolerans WP3] Length = 237 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 7/147 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH-RMQPILQAGNLVRVNWRSRLA 63 + +L R + E ++++ ++ GR R G S ++ I+Q + + + Sbjct: 2 ERGYVLHTRPFRESSVLVNLLVDGKGRVDAVARLGSSKNSIRSIVQPFQPLIFQLQGKSD 61 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L + S L + LY GL L R L + L+ + L Sbjct: 62 --LKNLKQVEAASPAVPLTGN--CLYSGLYLNELLIRCLTVQHSAENLFFNYHQTLIAM- 116 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLT 149 EL LL+ +G L Sbjct: 117 AKEFNQSQLRYFELALLQELGTMPSLE 143 >gi|296394229|ref|YP_003659113.1| DNA repair protein RecO [Segniliparus rotundus DSM 44985] gi|296181376|gb|ADG98282.1| DNA repair protein RecO [Segniliparus rotundus DSM 44985] Length = 247 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 68/179 (37%), Gaps = 14/179 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D ++L GE + I+ ++TR++G + + R + L+ + V V ++ Sbjct: 4 YRDVGVVLRNHQLGEADRIVALLTREHGVVRAVAKGVRRTRSKFGARLEPFSCVDVQLYQ 63 Query: 60 SRLAQNLGE-----FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R + + E + + K + L++ L P+ P +L+ + Sbjct: 64 GRSLDVITQAMTLDANSEEITADYGKY---TTGCAILETATLLAG--PQGAPAQQLHTLT 118 Query: 115 NIFLNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + I L + + G+ L C G +P++GGAVC Sbjct: 119 RGALVALRKGEKPRDLILSAFFLRAMGHAGWMPALVDCARCGAQGPHRAFNPRAGGAVC 177 >gi|282898320|ref|ZP_06306311.1| Recombination protein O, RecO [Raphidiopsis brookii D9] gi|281196851|gb|EFA71756.1| Recombination protein O, RecO [Raphidiopsis brookii D9] Length = 298 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 19/168 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-----QPILQAGNLVRVN 57 +Q I L GE + IL V+TR+ G + ++ I L+ Sbjct: 5 YQVRGINLKSHFLGESDKILTVLTRELGLIKAIAPGARKYQSNLNGRSGIFMVNELLISP 64 Query: 58 WRSRLAQNLGEFRF---EVLESHCAKLLSSSL-FLYGLQSIV--PLFRFLPEREPCLELY 111 +S Q G +R + L++H LS SL L Q + L + L E P +ELY Sbjct: 65 GKSNPTQTSGLYRINQAQTLKTHAG--LSKSLGKLAASQYLAEIALHQAL-EEHPQIELY 121 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELM-----LLKNIGFGLDLTKCVVT 154 D+LN L+ +I +I + L +L G + C +T Sbjct: 122 DLLNQHLDTLDSLPLIPQIAIVAHLAKGVFDMLNLAGISPQIQLCCLT 169 >gi|224476674|ref|YP_002634280.1| putative recombination protein O [Staphylococcus carnosus subsp. carnosus TM300] gi|254790738|sp|B9DNL2|RECO_STACT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222421281|emb|CAL28095.1| putative recombination protein O [Staphylococcus carnosus subsp. carnosus TM300] Length = 251 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 13/188 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-- 58 M + II+ YGE + I+ ++ + V+ + + LQA + V+ Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNENGAKVPLMVKRAKKSKTG--LQANTQLFVHGLF 58 Query: 59 -RSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 ++L + LG +V+ + L + + + + + E + +L Sbjct: 59 IYAKL-RGLGILNSIDVINQNYQLRLDIYDSSFAALCAEIIDKSMEDEEISNFNFKLLEF 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVCRS 174 LN K + + + L + + GF +D KC ++ L+ S K G + Sbjct: 118 CLNRIKEKDSAQLMSIIVLLKKMPSFGFSIDFDKCSISEENDQSKLIAFSFKYHGVIS-- 175 Query: 175 VGLPYAEK 182 Y ++ Sbjct: 176 --EQYIDR 181 >gi|300361842|ref|ZP_07058019.1| recombination protein O [Lactobacillus gasseri JV-V03] gi|300354461|gb|EFJ70332.1| recombination protein O [Lactobacillus gasseri JV-V03] Length = 250 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 68/193 (35%), Gaps = 16/193 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNL------VRV 56 +I + Y E +++ ++MT+ +G VR +S L N V Sbjct: 9 QGLIFKRKKYKEADVLAKIMTKDHGIFTIDVRGALRPKSRLGAATL---NFSYGKYIVNT 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 NW+ L F+ ++ L + Y + L E + YD++ Sbjct: 66 NWKG--ISTLRTFK--DVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIMK 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L I ++L LL G L +C++ G Q S + GG +C Sbjct: 122 ALLKINSGEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGTFDYSLELGGIICSDHF 181 Query: 177 LPYAEKMLVLPSF 189 +++M + P Sbjct: 182 NSVSQRMHLDPKV 194 >gi|238927456|ref|ZP_04659216.1| DNA repair protein RecO [Selenomonas flueggei ATCC 43531] gi|238884738|gb|EEQ48376.1| DNA repair protein RecO [Selenomonas flueggei ATCC 43531] Length = 243 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 19/181 (10%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR------MQPILQAGNLVRVNW 58 + I+LG RS+GE + I+ + T++ G + R MQ + A +L Sbjct: 6 AEGIVLGTRSWGEADKIVTIYTKERGLVRAAAFGCRRPRSPLAGAMQMFVHA-DLQFAEG 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R RL + + + ++ + L Y + + F+PE +D L + Sbjct: 65 R-RLE----TVKTASVRASHHRIADDLMALAYATFTAEVVCAFMPEGVADEHFFDTLALI 119 Query: 118 LNCHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRS 174 + + P V V L L G C+ G + + GGA+C + Sbjct: 120 VTAFETRHPRVAALAAV---LRTLDAAGLQQTYDHCIHCGAAIEGDAFFHAGEGGALCGT 176 Query: 175 V 175 Sbjct: 177 C 177 >gi|260583652|ref|ZP_05851400.1| DNA repair protein RecO [Granulicatella elegans ATCC 700633] gi|260158278|gb|EEW93346.1| DNA repair protein RecO [Granulicatella elegans ATCC 700633] Length = 267 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 14/197 (7%) Query: 1 MYW--QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRV 56 M + + I+L + Y E ++I+++ +R++G+ + FVRN Q SH + Sbjct: 1 MEYFQKFTGIVLFRQEYKEHDMIVKIFSREFGKQMFFVRNLQRSSHPLSAATLPFTR--A 58 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSS-----SLFLYGLQSIVPLFRFLPEREPCLELY 111 + + QN F E LE + + ++ Y +Q + + +R ELY Sbjct: 59 VFIGTIHQNGFSFIRECLEVQNHRRIYEQIEVQAVMTYMMQLV---DAVMEDRIVNTELY 115 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 D+L + + + EL +LK G +C + +S K G + Sbjct: 116 DLLENCIRAVENDLDPFILMHYFELKMLKYFGVAFQWQQCCFCEESVGPFDISLKHHGLL 175 Query: 172 CRSVGLPYAEKMLVLPS 188 C +++ + P Sbjct: 176 CSRHYDKDEKRLQLSPK 192 >gi|260886790|ref|ZP_05898053.1| DNA repair protein RecO [Selenomonas sputigena ATCC 35185] gi|330839398|ref|YP_004413978.1| DNA repair protein RecO [Selenomonas sputigena ATCC 35185] gi|260863389|gb|EEX77889.1| DNA repair protein RecO [Selenomonas sputigena ATCC 35185] gi|329747162|gb|AEC00519.1| DNA repair protein RecO [Selenomonas sputigena ATCC 35185] Length = 257 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 19/185 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN---- 57 +A++L R++GE + + ++TR+ GR + + +Q + + V Sbjct: 5 SAEALVLATRNWGEADKMASLLTRECGRVEAAAFGCRRPKSALAAGMQMFSHLDVELTEG 64 Query: 58 ---WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 W R G FR ++ LS+ YG PE EP + +D L Sbjct: 65 GRVWTVRQCSLKGRFR------RLSEDLSA--MAYGSFVAELALELFPEHEPAPDAFDRL 116 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCR 173 F + + +L L L CV G ++ + V GGA+C Sbjct: 117 LQFFCAFEERNPRLVALAAAYQLLALAG-LSLHLASCVHCGAPFEEPMSVDIGEGGALCA 175 Query: 174 SVGLP 178 Sbjct: 176 DCRKE 180 >gi|145223300|ref|YP_001133978.1| DNA repair protein RecO [Mycobacterium gilvum PYR-GCK] gi|315443760|ref|YP_004076639.1| DNA replication and repair protein RecO [Mycobacterium sp. Spyr1] gi|189039659|sp|A4T2B7|RECO_MYCGI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145215786|gb|ABP45190.1| DNA replication and repair protein RecO [Mycobacterium gilvum PYR-GCK] gi|315262063|gb|ADT98804.1| DNA replication and repair protein RecO [Mycobacterium sp. Spyr1] Length = 273 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 64/163 (39%), Gaps = 13/163 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR++G + + R + L+ + V Sbjct: 4 YRDRAVVLRQHKLGEADRIVSLLTREHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + + +++ + ++S +++ + ER P L+ + L Sbjct: 64 GRNLDIVT-QVQAIDAFASDIVSDYGRYTCACAMLETAERIAGEERAPVPALHRLTVAAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFG------LDLTKCVVTG 155 + ++ + + LL+ +G ++ +C G Sbjct: 123 RAVADGTRPRELVL--DAYLLRAMGVAGWAPALIECARCAAPG 163 >gi|296140451|ref|YP_003647694.1| DNA repair protein RecO [Tsukamurella paurometabola DSM 20162] gi|296028585|gb|ADG79355.1| DNA repair protein RecO [Tsukamurella paurometabola DSM 20162] Length = 270 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 60/180 (33%), Gaps = 16/180 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D A++L GE + IL ++TR+ G + + R + L+ V + + Sbjct: 7 YRDSAVVLRQHKLGEADYILTLLTRENGLVRAVAKGVRRPRSRFGARLELFAHVDLQLYP 66 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRF---LP--EREPCLELYDM 113 R + S A YG + + L ER P EL+ + Sbjct: 67 GRNLD-----TVTQVHSIAAYS-GDLAGDYGRYTTACAVIETAERLAGEERAPAPELHRL 120 Query: 114 LNIFLNCHKIP-SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L I + L + G+ L C G T +GGAVC Sbjct: 121 TVGALRAIAAGLRDRDLILISFLLRAMDAAGWAPALDLCARCGDTGPHRAFHVAAGGAVC 180 >gi|50085653|ref|YP_047163.1| DNA repair protein [Acinetobacter sp. ADP1] gi|49531629|emb|CAG69341.1| DNA repair protein [Acinetobacter sp. ADP1] Length = 236 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T +YGR G +R + QPI ++ + L Sbjct: 7 HGYLIHHRRYREKSHIVHLFTEEYGRIDGILRQIPPPQYQPI-----TLQATGKGELKN- 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY------DMLNIFLN 119 + E++ F G L R P E + + LN Sbjct: 61 --FTKLEIMNY--PVFFHGDAFFAGFYLNEVLLRLCPLEEAMPQTFQQYQIILQQLQLLN 116 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P++ K ++ E +LL+ +G+ +D Sbjct: 117 QHQQPAIFLKQILRQFEHVLLQELGYAIDFE 147 >gi|154498353|ref|ZP_02036731.1| hypothetical protein BACCAP_02342 [Bacteroides capillosus ATCC 29799] gi|150272664|gb|EDM99842.1| hypothetical protein BACCAP_02342 [Bacteroides capillosus ATCC 29799] Length = 252 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 54/170 (31%), Gaps = 22/170 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV---- 56 M+ I+L +Y E + IL V+TR G+ V+ R L A + + V Sbjct: 1 MHLTTQGIVLREVNYKESDKILTVLTRDLGKLT--VKARACRRKNSPLAAASQLLVYSEL 58 Query: 57 -------NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE 109 W +L +F G + E P Sbjct: 59 TLFEYRDYWSMDQGDSLEQF--------WGVRQDVEKLALGSYFAEVMETVAEEGRPDPA 110 Query: 110 LYDMLNIFLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 L ++ L + + + EL LL +G+ L C V GV + Sbjct: 111 LLSLILNSLYALDKLSKPLPLVKAAYELKLLSLVGYEPMLDACAVCGVPE 160 >gi|42519245|ref|NP_965175.1| DNA repair protein RecO [Lactobacillus johnsonii NCC 533] gi|61215125|sp|Q74IZ0|RECO_LACJO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|41583533|gb|AAS09141.1| DNA repair protein RecO [Lactobacillus johnsonii NCC 533] Length = 250 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 68/193 (35%), Gaps = 16/193 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNL------VRV 56 +I + Y E +++ ++MT+ +G VR +S L N V Sbjct: 9 QGLIFKRKKYKEADVLTKIMTKDHGIFTIDVRGALRPKSRLGAATL---NFSYGKYIVNT 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 NW+ L F+ ++ L + Y + L E + YD++ Sbjct: 66 NWKG--ISTLRTFK--DVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIIK 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L I ++L LL G L +C++ G Q S + GG +C Sbjct: 122 ALLKINSGEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGKFDYSLELGGIICSDHF 181 Query: 177 LPYAEKMLVLPSF 189 +++M + P Sbjct: 182 NSVSQRMHLDPKV 194 >gi|296875493|ref|ZP_06899566.1| recombination protein O [Streptococcus parasanguinis ATCC 15912] gi|296433560|gb|EFH19334.1| recombination protein O [Streptococcus parasanguinis ATCC 15912] Length = 259 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 10/156 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL-AQN 65 I+L R + E + ++++ T + G+ + FV + R+ +LQ LV + ++ Sbjct: 9 GIVLYNREFREDDKLVKIFTEKSGKRMFFVNHAGKSRLNSMLQP--LVTADMLLKINDDG 66 Query: 66 LGEF----RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L +V + A L + S Y L + + + L+ L L Sbjct: 67 LSYIDDFQDVQVYKKINADLFALSYATYVLALA---DASIHDNQVDPALFAFLEKTLLLM 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + E+ +L G L+L +C Sbjct: 124 EEGLDYEVLTNIFEIQILSRFGVILNLHECCFCHRV 159 >gi|282851788|ref|ZP_06261151.1| DNA repair protein RecO [Lactobacillus gasseri 224-1] gi|282557030|gb|EFB62629.1| DNA repair protein RecO [Lactobacillus gasseri 224-1] Length = 250 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 69/193 (35%), Gaps = 16/193 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNL------VRV 56 +I + Y E +I+ +MT+ +G VR +S L N V Sbjct: 9 QGLIFKRKKYKEADILTNIMTKDHGIFTIDVRGALRPKSRLGAATL---NFSYGKYIVNT 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 NW+ +L F+ ++ L + Y + L E + YD++ Sbjct: 66 NWKG--ISSLRTFK--DVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIMK 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + I ++L LL G L +C++ G Q S + GG +C Sbjct: 122 ALLKINSGEDVAVITQMVQLKLLNAYGVAPQLDRCLICGKVQGTFDYSLELGGIICSDHF 181 Query: 177 LPYAEKMLVLPSF 189 +++M + P Sbjct: 182 NSVSQRMHLDPKV 194 >gi|110597274|ref|ZP_01385562.1| DNA repair protein RecO [Chlorobium ferrooxidans DSM 13031] gi|110341110|gb|EAT59578.1| DNA repair protein RecO [Chlorobium ferrooxidans DSM 13031] Length = 284 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 18/165 (10%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW---RSR 61 A+IL Y +++ I + TR++G+ ++ + +++ + AGN+V V +SR Sbjct: 30 AVILREVKYRDQSKICALYTREFGKISVIIKGARNPKNKLSGLFSAGNVVDVVLYKKQSR 89 Query: 62 LAQNL---GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-CLELYDMLNIF 117 L G + L I+ L R E + L L+ +L Sbjct: 90 -DIQLVSDGNLVLSPMVPDP-----DMERFAVLYQIIDLIRTGTESDEKNLPLFTLLAGT 143 Query: 118 LNCHKIPSVIGKIFVQI-ELMLLKNIGFGLDLTKCVVTGVTQDLL 161 L V + L L+ +GF L+ CV +G +DL Sbjct: 144 LQQLYRSGVNFRQLHAWFLLRLVSLMGFQPLLSNCVFSG--EDLT 186 >gi|118618890|ref|YP_907222.1| DNA repair protein RecO [Mycobacterium ulcerans Agy99] gi|166221902|sp|A0PTT2|RECO_MYCUA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118571000|gb|ABL05751.1| recombination protein O RecO [Mycobacterium ulcerans Agy99] Length = 265 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 60/157 (38%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR +G + + R + L+ + Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGSRLEPFAHIDAQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + +++ A +++ +++ L ER P L+ + L Sbjct: 64 GRNLDIVT-QVVSIDAFAADIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTVGAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFG---LDLTKCV 152 S + + ++ LL+ +G LT+C Sbjct: 123 RAVADGS-RPRDLL-LDAYLLRAMGIAGWVPALTECA 157 >gi|303239951|ref|ZP_07326473.1| DNA repair protein RecO [Acetivibrio cellulolyticus CD2] gi|302592430|gb|EFL62156.1| DNA repair protein RecO [Acetivibrio cellulolyticus CD2] Length = 248 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 13/185 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV-----RVNWRSR 61 +IL + GE + I+ + ++ G+ G + R + L AG + V ++ + Sbjct: 8 GVILKEINVGEADKIVTIFSKNKGKISGSAKGA--RRPKSSLVAGTQLFCYSEFVLFKGK 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLNC 120 +V+E ++ + + L I + + E +P + + L Sbjct: 66 --DMYSLNSCDVIE-PFYEIRNDLVKLTYAAHINEIITDIVQEEQPSARVLQLFLNSLYM 122 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLW-VSPKSGGAVCRSVGLP 178 + + E+ LL +G+ + C+ G + S + G +C+ Sbjct: 123 LSKTEKAPEQIARVFEIRLLSILGYAPSVRGCIKCGSEDFTDFSFSFRKCGFLCKQCIED 182 Query: 179 YAEKM 183 + Sbjct: 183 DRYAL 187 >gi|183983652|ref|YP_001851943.1| recombination protein O RecO [Mycobacterium marinum M] gi|238690926|sp|B2HLB2|RECO_MYCMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|183176978|gb|ACC42088.1| recombination protein O RecO [Mycobacterium marinum M] Length = 265 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 60/157 (38%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR +G + + R + L+ + Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGSRLEPFAHIDAQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + +++ A +++ +++ L ER P L+ + L Sbjct: 64 GRNLDIVT-QVVSIDAFAADIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTVGAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCV 152 S + + ++ LL+ +G LT+C Sbjct: 123 RAVADGS-RPRDLL-LDAYLLRAMGIAGWAPALTECA 157 >gi|300858945|ref|YP_003783928.1| DNA repair protein [Corynebacterium pseudotuberculosis FRC41] gi|300686399|gb|ADK29321.1| DNA repair protein [Corynebacterium pseudotuberculosis FRC41] gi|302206646|gb|ADL10988.1| DNA repair protein [Corynebacterium pseudotuberculosis C231] gi|302331195|gb|ADL21389.1| DNA repair protein [Corynebacterium pseudotuberculosis 1002] gi|308276889|gb|ADO26788.1| DNA repair protein [Corynebacterium pseudotuberculosis I19] Length = 242 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 12/182 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 +++ A+++ +GE + I+ ++TR G + + + + LQ + V + Sbjct: 6 YRERALVVRTYDFGEADRIVVLLTRGRGIVRAVAKGVRRAKSRFGSRLQPFVELDVQLYV 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE---PCLELYDMLNI 116 R ++ + + ++L+ + V L E+ +L+D+ Sbjct: 66 GRTLDSI--TAADTVAYFGSQLIDDPTRYAA--ACVVLESV--EKMSIGAEPQLFDLAVE 119 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + L + G+ L C G + P +GGAVC Sbjct: 120 ALQGLQTTAQPLYDVDAFLLQAMNCAGWAPSLFDCAQCGASGPHHAFHPVAGGAVCVHCR 179 Query: 177 LP 178 P Sbjct: 180 PP 181 >gi|260551501|ref|ZP_05825685.1| DNA repair protein RecO [Acinetobacter sp. RUH2624] gi|260405495|gb|EEW98988.1| DNA repair protein RecO [Acinetobacter sp. RUH2624] Length = 237 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P EP + ++ + L+ Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEPMPQTFEQYQLTLLQLQQLS 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ +D + Sbjct: 118 SHENPDLFLRQILRQFEHILLPELGYAIDFS 148 >gi|116629755|ref|YP_814927.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus gasseri ATCC 33323] gi|311110603|ref|ZP_07712000.1| DNA repair protein RecO [Lactobacillus gasseri MV-22] gi|122273307|sp|Q042Y3|RECO_LACGA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116095337|gb|ABJ60489.1| DNA replication and repair protein RecO [Lactobacillus gasseri ATCC 33323] gi|311065757|gb|EFQ46097.1| DNA repair protein RecO [Lactobacillus gasseri MV-22] Length = 250 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 16/193 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNL------VRV 56 +I + Y E +I+ ++MT+ +G VR +S L N V Sbjct: 9 QGLIFKRKKYKEADILTKIMTKDHGIFTIDVRGALRPKSRLGAATL---NFSYGKYIVNT 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 NW+ +L F+ ++ L + Y + L E + YD++ Sbjct: 66 NWKG--ISSLRTFK--DVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIMK 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + I ++L LL G L +C++ G Q S + GG +C Sbjct: 122 ALLKINSGEDVAVITQMVQLKLLNAYGVAPQLDRCLICGKVQGTFDYSLELGGIICSDHF 181 Query: 177 LPYAEKMLVLPSF 189 +++M + P Sbjct: 182 NSVSQRMHLDPKV 194 >gi|160878805|ref|YP_001557773.1| DNA repair protein RecO [Clostridium phytofermentans ISDg] gi|160427471|gb|ABX41034.1| DNA repair protein RecO [Clostridium phytofermentans ISDg] Length = 246 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 80/216 (37%), Gaps = 23/216 (10%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL---QAGNLVRVN-WRSRL 62 I+L G+ + L ++T++ G+ F + + +L Q + R Sbjct: 9 GIVLATIPIGDYDKRLTILTKERGKIGAFAKGAR-RPNSALLACSQPFTYGEFQLYAGRN 67 Query: 63 AQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLE----LYDMLNIF 117 + N+ ++++ +L S YGL E E LY L Sbjct: 68 SYNIQSVN---IKNYFGELREDISYVYYGLYFCEFTDYMTREGNDETEMLKLLYQSLRAL 124 Query: 118 LNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 LN H IG V+ EL ++ G + +C+ G ++L S +GG C S Sbjct: 125 LNPH-----IGTKLVRYIFELKIISLGGEAPQVFECLNCGTKENLSRFSASAGGCFCESC 179 Query: 176 GLPYAE--KMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + ++L + + + D + L + F +T Sbjct: 180 KQKATDGKRILTSTLYTLQYIISADVEKLYN-FTVT 214 >gi|184159113|ref|YP_001847452.1| recombinational DNA repair protein (RecF pathway) [Acinetobacter baumannii ACICU] gi|332875942|ref|ZP_08443728.1| DNA repair protein RecO [Acinetobacter baumannii 6014059] gi|183210707|gb|ACC58105.1| Recombinational DNA repair protein (RecF pathway) [Acinetobacter baumannii ACICU] gi|332735808|gb|EGJ66849.1| DNA repair protein RecO [Acinetobacter baumannii 6014059] Length = 237 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P E + ++ + L+ Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ +D + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYAIDFS 148 >gi|315925209|ref|ZP_07921423.1| recombination protein O [Pseudoramibacter alactolyticus ATCC 23263] gi|315621443|gb|EFV01410.1| recombination protein O [Pseudoramibacter alactolyticus ATCC 23263] Length = 255 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 13/179 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-----QPILQAGNLVRVNW 58 + A+++ + + + + IL + T G+ + + + + GN V + Sbjct: 5 RTKALVIREQPFQDHDKILTLFTETEGKQKAIAKGARRRKGSLGVATQLFAYGNFVY--Y 62 Query: 59 RSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + N+ E E + ++ +L Y L+ + F F + EL Sbjct: 63 PGKNFANINEVTLIEAFYALRGDVMKMALGSYLLELLDVFFDFY---QGDPELLKAATHI 119 Query: 118 LNCHKIPSVI--GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + V +L L + G G LT+CV +G + L S GG V + Sbjct: 120 LYYLSENMAASDEALAVGFQLKLTRRQGLGPVLTRCVRSGEREALTAFSIADGGVVTEA 178 >gi|259503182|ref|ZP_05746084.1| recombination protein O [Lactobacillus antri DSM 16041] gi|259168839|gb|EEW53334.1| recombination protein O [Lactobacillus antri DSM 16041] Length = 268 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 6/172 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 II+ R Y E++++++++T + G + +VR+ + R+ L ++ LA Sbjct: 17 GIIIYRRDYRERDLLIKILTDRIGPAMFYVRDAKKRGFRLAGDLLPFT--HGSYIGSLAD 74 Query: 65 NLGEFRFEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 N F E+H + ++ L Y + + +P +D + L Sbjct: 75 NGLSFINAASETHQYRHIAGDLSKNAYATYILALADHAFADGQPLGGWFDQVAAALALID 134 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + IE LL G +CV+ G L S + GG +C Sbjct: 135 HGQDEQVVTNVIETQLLTVFGVAPTWDRCVICGRADRPLDFSEQYGGMLCSQ 186 >gi|94986745|ref|YP_594678.1| hypothetical protein LI0301 [Lawsonia intracellularis PHE/MN1-00] gi|254764637|sp|Q1MRL9|RECO_LAWIP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|94730994|emb|CAJ54357.1| hypothetical protein LI0301 [Lawsonia intracellularis PHE/MN1-00] Length = 249 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 20/168 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN- 57 M W D+AIIL + S+ E ++ ++++T Q+G F G R + L N ++V Sbjct: 1 MEWLDNAIILELGSFRESDVWVKLLTSQHGVISAFAFGGHRSRRRFCGCLGILNEIQVRV 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL--------YGLQSIVPLFRFLPEREPCLE 109 SR G F L A L++ + L + I L + Sbjct: 61 QTSRN----GRF----LNLQEASLINGPIQLRTNKNRFGAFINCIRFLEVVGVSSDAAPP 112 Query: 110 LYDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGV 156 +Y ++ + + +I + L + G+ + C G Sbjct: 113 VYTLMKELFYFFEKNTQPYEIIPILFRLRIASEQGYAPIFSNCAKCGR 160 >gi|210623876|ref|ZP_03294111.1| hypothetical protein CLOHIR_02062 [Clostridium hiranonis DSM 13275] gi|210153302|gb|EEA84308.1| hypothetical protein CLOHIR_02062 [Clostridium hiranonis DSM 13275] Length = 230 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 7/162 (4%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRF---EVLESH 77 IL + TR G+ + R + L + L + G +R E+++S Sbjct: 2 ILTIFTRNLGKVSAIAKGA--KRNKSALLPSAQLFAYSNFTLKKQRGMYRVSQSEIIKSF 59 Query: 78 CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGK-IFVQIEL 136 F Y + L E + +L++++ + V + I EL Sbjct: 60 YDISYDIDAFSYASYISRLVENSLLENQTNRKLFNLIVKTMYLLSQKDVDKEFITAAFEL 119 Query: 137 MLLKNIGFGLDLTKCVVTGVTQDLLWV-SPKSGGAVCRSVGL 177 +GF +C V G D + + + GG +C+ Sbjct: 120 KFSDCMGFRPITDRCSVCGDESDQRAIFNIEEGGMLCKKCAE 161 >gi|308379182|ref|ZP_07485400.2| hypothetical protein TMJG_00632 [Mycobacterium tuberculosis SUMu010] gi|308357820|gb|EFP46671.1| hypothetical protein TMJG_00632 [Mycobacterium tuberculosis SUMu010] Length = 307 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 63/185 (34%), Gaps = 20/185 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR- 59 ++D A++L GE + I+ ++TR +G + + R + L+ + V Sbjct: 46 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHP 105 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRF---LP--EREPCLELYDM 113 R +V+ + + YG + + L ER P L+ + Sbjct: 106 GRNLD----IVTQVVSVDAFA--TDIVADYGRYTCGCAILETAERLAGEERAPAPALHRL 159 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + + ++ LL+ +G LT+C +GG+ Sbjct: 160 TVGALRAVADGQ-RPRDLL-LDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGS 217 Query: 171 VCRSV 175 VC Sbjct: 218 VCAHC 222 >gi|113477991|ref|YP_724052.1| DNA repair protein RecO [Trichodesmium erythraeum IMS101] gi|119361497|sp|Q10VZ5|RECO_TRIEI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110169039|gb|ABG53579.1| DNA replication and repair protein RecO [Trichodesmium erythraeum IMS101] Length = 288 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 20/168 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 ++ I L + GE + +L ++T +YG + + + L N + ++ Sbjct: 5 YKATGINLKAMALGESDRLLTILTPEYGLIRVVAPGVRKQKSKLGGRGELFVVNQLLIS- 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR--FLPEREPCLELYDMLNI 116 + R + + E + S+ L + L Q + L + L E P EL+ +LN Sbjct: 64 KGRSLDRINQA--ETITSYTG-LSQNLGKLAAGQYLAELVQQIALKEN-PQTELFHLLNE 119 Query: 117 FLNCHKI-----PSVIGKIFVQIEL----MLLKNIGFGLDLTKCVVTG 155 L + + + LL G + +C TG Sbjct: 120 HLERIEQLQHKTDRLWSTQLIAFLAHGIYHLLAIEGIAPQVHQCCATG 167 >gi|304383675|ref|ZP_07366134.1| recombination protein O [Prevotella marshii DSM 16973] gi|304335199|gb|EFM01470.1| recombination protein O [Prevotella marshii DSM 16973] Length = 241 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 21/194 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR---NGQSHRMQPILQAGNLVRVN 57 M + AI+L YG+ +++E++T ++GR R + + Q L+ + Sbjct: 1 MLIKTRAIVLHTFKYGDAKLVIELLTEKFGRLSFMSRIPKTAKGKLKKQFFQPLTLLEIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF----RFLPEREPCLELYDM 113 + R L R + + + L + R E P L++ Sbjct: 61 FDMRQRGGLQTMRDARIALPFVSIPFEPVKLSLSLFVAEFLYYATRSEQENTP---LFNY 117 Query: 114 LNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + F + L L + +GF +L T + ++G C Sbjct: 118 LINCIEWLDNSCGAFANFHLVFTLRLSRFLGFYPNLEASAAT------AYFDLRNG---C 168 Query: 173 RSVGLP-YAEKMLV 185 + +P +A+ +L Sbjct: 169 FTATMPSHADFLLP 182 >gi|262278199|ref|ZP_06055984.1| recombinational DNA repair protein [Acinetobacter calcoaceticus RUH2202] gi|262258550|gb|EEY77283.1| recombinational DNA repair protein [Acinetobacter calcoaceticus RUH2202] Length = 237 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L I + R P E + ++ + L Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLSEI--ILRLCPLEEAMPQSFEQYQLTLLQLQQLA 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 + P + + ++ E +LL +G+ LD + Sbjct: 118 SNDQPDLFLRQILRQFEHVLLPELGYALDFS 148 >gi|332638282|ref|ZP_08417145.1| DNA replication and repair protein RecO [Weissella cibaria KACC 11862] Length = 264 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 8/183 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRSRL- 62 DAI++ + EK+++++++T+Q G+ + +++NG+S R Q +Q L + L Sbjct: 6 DAIVMYQQDRKEKDLMVKMLTKQGGKRMFYIKNGKSKRYQFAADVQP--LTVATFEGTLN 63 Query: 63 AQNLGEFRFEVLESHCAK--LLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L V ESH ++ ++ + Y + + + +P + Y+ + + Sbjct: 64 PTGLSFINA-VKESHQSRELMMDVTKNAYMTYILGLIDAAFVDNQPIGKWYEWARLAIEK 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + I E+ LL G +CVV G L S K G +C+ Sbjct: 123 IERGLDPQGIANFFEIKLLPAFGLEPTWGECVVCGRRDLPLDFSEKLNGTLCQLHWDQDE 182 Query: 181 EKM 183 ++M Sbjct: 183 QRM 185 >gi|320527306|ref|ZP_08028491.1| DNA repair protein RecO [Solobacterium moorei F0204] gi|320132330|gb|EFW24875.1| DNA repair protein RecO [Solobacterium moorei F0204] Length = 250 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 23/194 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP-----------ILQ 49 M + +L Y E ++IL V+T++YG+ + + + IL Sbjct: 1 MNDRITGFVLKQSDYREADVILTVLTKEYGKLSFVAQGVRKMTSKNAGSIMPYTKTEILF 60 Query: 50 AGNLVRVNWR---SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP 106 N + +R +R + ++ S A + + + + LQ+ + Sbjct: 61 DYNETKTIFRLKNARCKEYYRSMHEDIAASSAAAVAAELINVLTLQASSDMT-------- 112 Query: 107 CLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + Y L+I + + + + +L+ G D+ CV G T ++ VSPK Sbjct: 113 NSDEYAFLDIVFSKLDEGYDPTLVLSLLFVDMLELAGLLPDVDACVTCGNTH-VVTVSPK 171 Query: 167 SGGAVCRSVGLPYA 180 GG +C+ + Sbjct: 172 DGGFLCQEHAEEHH 185 >gi|213158239|ref|YP_002320290.1| DNA repair protein RecO [Acinetobacter baumannii AB0057] gi|215482648|ref|YP_002324842.1| DNA repair protein RecO [Acinetobacter baumannii AB307-0294] gi|301345821|ref|ZP_07226562.1| DNA repair protein RecO [Acinetobacter baumannii AB056] gi|301594767|ref|ZP_07239775.1| DNA repair protein RecO [Acinetobacter baumannii AB059] gi|332851052|ref|ZP_08433161.1| DNA repair protein RecO [Acinetobacter baumannii 6013150] gi|332869699|ref|ZP_08438887.1| DNA repair protein RecO [Acinetobacter baumannii 6013113] gi|213057399|gb|ACJ42301.1| DNA repair protein RecO [Acinetobacter baumannii AB0057] gi|213988028|gb|ACJ58327.1| DNA repair protein RecO [Acinetobacter baumannii AB307-0294] gi|332730216|gb|EGJ61541.1| DNA repair protein RecO [Acinetobacter baumannii 6013150] gi|332732601|gb|EGJ63834.1| DNA repair protein RecO [Acinetobacter baumannii 6013113] Length = 237 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P E + ++ + L+ Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ +D + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYAIDFS 148 >gi|260589682|ref|ZP_05855595.1| DNA repair protein RecO [Blautia hansenii DSM 20583] gi|260539922|gb|EEX20491.1| DNA repair protein RecO [Blautia hansenii DSM 20583] Length = 247 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 18/195 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVRVNWRSR 61 ++L GE + L ++TR+ G+ F + + + M + G+ + R Sbjct: 9 GMVLSAMPVGEYDKRLVILTREKGKITVFAKGARRQNSTMMAVSNPFVFGSFLIYE--GR 66 Query: 62 LAQNLGEFRFEVLESHCAKLLS-SSLFLYGLQSIVPLF----RFLPEREPCLELYDMLNI 116 A L +++ ++L YG + + E+E LY L Sbjct: 67 TAYQLRSASV---KNYFSELAGIQPEVYYGFYFLELADFYARENIDEKEVLNLLYITLKA 123 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + P +I ++ EL + G + C G T++L W S + G C++ G Sbjct: 124 LIAQRIEPMLI--RYI-FELKTVAINGEAPYVFACEECGTTEELQWFSVREAGVFCKNCG 180 Query: 177 LPYAEKMLVLPSFLW 191 M + PS L+ Sbjct: 181 NGKKGVMYISPSALY 195 >gi|227543023|ref|ZP_03973072.1| DNA repair protein RecO [Corynebacterium glucuronolyticum ATCC 51866] gi|227181245|gb|EEI62217.1| DNA repair protein RecO [Corynebacterium glucuronolyticum ATCC 51866] Length = 241 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 66/182 (36%), Gaps = 12/182 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 +++ A+I+ +GE + I+ +TR G G + + + R LQ + V ++ Sbjct: 6 YRERAVIVRTYDFGEADRIVVFLTRTRGIVRGVAKGVRRANSRFGSRLQPFVELDVQFYK 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFL--PEREPCLELYDMLNI 116 R NL + +L+ + + + E E +YD + Sbjct: 66 GR---NLESVTEADAVTFFGRLIDDYPRYTAASTVLETAEKVSLGAESE---GVYDRVLN 119 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L V+ + L ++ ++G+ L C G +GGA+C Sbjct: 120 ALAELNETGVVTPVLDAFLLHIMSDVGWPPSLFDCAQCGAPGPHEVFHAGAGGALCERCR 179 Query: 177 LP 178 LP Sbjct: 180 LP 181 >gi|169795099|ref|YP_001712892.1| DNA repair protein [Acinetobacter baumannii AYE] gi|169148026|emb|CAM85889.1| DNA repair protein [Acinetobacter baumannii AYE] Length = 236 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 7 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P E + ++ + L+ Sbjct: 61 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLS 116 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ +D + Sbjct: 117 SHENPDLFLRQILRQFEHILLAELGYAIDFS 147 >gi|331083114|ref|ZP_08332231.1| DNA repair protein RecO [Lachnospiraceae bacterium 6_1_63FAA] gi|330405116|gb|EGG84653.1| DNA repair protein RecO [Lachnospiraceae bacterium 6_1_63FAA] Length = 247 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 14/193 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVRVNWRSR 61 ++L GE + L ++TR+ G+ F + + + M + G+ + R Sbjct: 9 GMVLSAMPVGEYDKRLVILTREKGKITVFAKGARRQNSTMMAVSNPFVFGSFLIYE--GR 66 Query: 62 LAQNLGEFRFEVLESHCAKLLS-SSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 A L +++ ++L YG + + E ++ ++L I L Sbjct: 67 TAYQLRSASV---KNYFSELAGIQPEVYYGFYFLELADFYARENTDEKDMLNLLYITLKA 123 Query: 121 HKIPSVIGKI--FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + ++ EL + G + C G T++L W S + G C++ G Sbjct: 124 LIAQRIEPMLIRYI-FELKTVAINGEAPYVFACEECGTTEELQWFSVREAGVFCKNCGNG 182 Query: 179 YAEKMLVLPSFLW 191 M + PS L+ Sbjct: 183 KKGVMYISPSALY 195 >gi|193078013|gb|ABO12934.2| DNA repair protein [Acinetobacter baumannii ATCC 17978] Length = 236 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 7 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P E + ++ + L+ Sbjct: 61 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLS 116 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ +D + Sbjct: 117 SHENPDLFLRQILRQFEHILLAELGYAIDFS 147 >gi|301511104|ref|ZP_07236341.1| DNA repair protein RecO [Acinetobacter baumannii AB058] Length = 237 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P E + ++ + L+ Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ +D + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYAIDFS 148 >gi|291565919|dbj|BAI88191.1| DNA repair protein RecO [Arthrospira platensis NIES-39] Length = 298 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 7/125 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW---R 59 ++ IIL GE + +L ++T ++G + R + G V W + Sbjct: 5 YKATGIILKAIPLGESDRLLTILTPEFGLMRVVAPGARKSRSRLGGTTGLFVVNQWLIAK 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFL 118 R + + E++ SH + G L + L E +P EL+ +L+ L Sbjct: 65 GRSLDKI--TQAEIINSHSGLAKNLGKLAAGQYLAELVLSQALSE-QPQPELFLLLSEHL 121 Query: 119 NCHKI 123 + + Sbjct: 122 DRLEE 126 >gi|332532633|ref|ZP_08408509.1| DNA recombination and repair protein RecO [Pseudoalteromonas haloplanktis ANT/505] gi|332037849|gb|EGI74298.1| DNA recombination and repair protein RecO [Pseudoalteromonas haloplanktis ANT/505] Length = 230 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 66/151 (43%), Gaps = 17/151 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A +L R Y + ++L+++ G+ R Q+ + + LQ + VN+ + Sbjct: 8 AYLLHRRPYSDSQVMLDMLVEGVGQLRMLARISGRQATKHKAQLQPFQALLVNYSGK--- 64 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF------RFLPEREPCLELYDMLNIFL 118 +++ + +L +S FL G + + R +P EP +++++ L Sbjct: 65 ------YDLKYINKFELHGNSHFLKGDELYCGFYLNELTNRIVPVNEPIEQVFELYKTHL 118 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + ++ E LL+ +G+G+D + Sbjct: 119 SNLNSGANLQEVLRSYEFQLLELLGYGVDFS 149 >gi|54296964|ref|YP_123333.1| DNA repair protein recO [Legionella pneumophila str. Paris] gi|81601917|sp|Q5X6G0|RECO_LEGPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|53750749|emb|CAH12156.1| DNA repair protein recO [Legionella pneumophila str. Paris] Length = 229 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 8/154 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ TR+ G + G++ + Q +LQA + V+ R Q Sbjct: 8 AWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQ-- 65 Query: 67 GEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK--- 122 + +ES ++L L+ GL L+ L P +L+D LN Sbjct: 66 --YYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDSDLFDAYLFTLNGIALAR 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 I + + E LLK G+ TG Sbjct: 124 EREAIEALLRRFEWALLKACGYTFSFLHEARTGE 157 >gi|87118654|ref|ZP_01074553.1| DNA repair protein RecO [Marinomonas sp. MED121] gi|86166288|gb|EAQ67554.1| DNA repair protein RecO [Marinomonas sp. MED121] Length = 254 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 11/156 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR--VNWRSRLAQ 64 A ++ R + + I+L+++T + G R + + + G +R V + R Sbjct: 11 AYVIHTRPFQDNKILLDLLTLEMGLVRAVFR---LPKKEARVIPGPFLRYQVQLKGRTE- 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 VLES L L G+ L + LP P +++ ++ Sbjct: 67 ---LKTVYVLESTEPASQLEGLRLFAGMYVHEILLKLLPTNLPLSIFFELYQWLIHSLHS 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + + + E L + IG ++L TG D Sbjct: 124 NAPVAPLLRRFEYALFEEIGSSINLAM-TATGSVLD 158 >gi|311748757|ref|ZP_07722542.1| DNA repair protein RecO [Algoriphagus sp. PR1] gi|126577291|gb|EAZ81539.1| DNA repair protein RecO [Algoriphagus sp. PR1] Length = 229 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 15/157 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y E +II+++ TR+ G V +S + + + Q L+ + Sbjct: 1 MLHKTKGIVLSYFRYKETSIIVKIFTRELGLKPYLVNGVRSQKSKSKIALYQPMTLLDLV 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLS------SSLFLYGLQSIVPLFRFLPEREPCLELY 111 ++ +N G R + A+ L+ + L L+ + R + E L+ Sbjct: 61 VYNK--ENSGLQRISEAKLAKAQQLTPFDFNRTGLALFM---TEIVSRSIFENYQNEHLF 115 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLD 147 D L++ + K F + + K +GF D Sbjct: 116 DFLSMSILVLDQKDTSLKHFPLVFLMEQAKYLGFAPD 152 >gi|260556585|ref|ZP_05828803.1| DNA repair protein RecO [Acinetobacter baumannii ATCC 19606] gi|260409844|gb|EEX03144.1| DNA repair protein RecO [Acinetobacter baumannii ATCC 19606] Length = 237 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P E + ++ + L+ Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ +D + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYAIDFS 148 >gi|325107899|ref|YP_004268967.1| DNA repair protein recO [Planctomyces brasiliensis DSM 5305] gi|324968167|gb|ADY58945.1| DNA repair protein recO [Planctomyces brasiliensis DSM 5305] Length = 249 Score = 52.8 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 13/156 (8%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP-------ILQAGNLVRV 56 + + I++ + E + ++ TR +G+ + R++ +L +V + Sbjct: 6 KTEGIVIRQADFSESSRVVTFFTRDFGKISALAKGA--KRLKGPFEAAIDLLTRCQIVFL 63 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLN 115 + + L L + Y + L E+ +P YD Sbjct: 64 H---KSTDRLDLLTEAKLVQRFGPDVRDVNVHYAGLYVAELLNSCSEQFDPAPAWYDAAV 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 L+ ++ ++ EL L+ +G + C Sbjct: 121 ATLDRLRMTGDYRLELLRFELFTLQVLGLLPEFENC 156 >gi|323340795|ref|ZP_08081047.1| recombination protein O [Lactobacillus ruminis ATCC 25644] gi|323091918|gb|EFZ34538.1| recombination protein O [Lactobacillus ruminis ATCC 25644] Length = 264 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 67/186 (36%), Gaps = 15/186 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 I++ R Y E++++++++T +YG ++R + R+ I+ + R Sbjct: 11 GIVVSKRDYKERDLLVKILTNRYGYKTFYIRGAKKRGFRLGAIILPFSHGRYLGSI-NDD 69 Query: 65 NLGEFR----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC---LELYDMLNIF 117 L + ++ ++ ++ Y L + + C + Y + Sbjct: 70 GLSYLSTGKEIDQYQNIFNDIMLNAYASYVLGLGEAAIK-----DDCILASQWYRKIERA 124 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L I +E+ +L+ G + C V G + S GG +C++ Sbjct: 125 LQLIDQGVNPLIIVSIMEIQMLELFGVAPEWRFCAVCGNQRSSFDYSESYGGILCKNHWH 184 Query: 178 PYAEKM 183 ++ Sbjct: 185 LDQNRL 190 >gi|308375863|ref|ZP_07445349.2| hypothetical protein TMGG_00923 [Mycobacterium tuberculosis SUMu007] gi|308344944|gb|EFP33795.1| hypothetical protein TMGG_00923 [Mycobacterium tuberculosis SUMu007] Length = 273 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 63/185 (34%), Gaps = 20/185 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR- 59 ++D A++L GE + I+ ++TR +G + + R + L+ + V Sbjct: 12 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHP 71 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRF---LP--EREPCLELYDM 113 R +V+ + + YG + + L ER P L+ + Sbjct: 72 GRNLD----IVTQVVSVDAFA--TDIVADYGRYTCGCAILETAERLAGEERAPAPALHRL 125 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + + ++ LL+ +G LT+C +GG+ Sbjct: 126 TVGALRAVADGQ-RPRDLL-LDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGS 183 Query: 171 VCRSV 175 VC Sbjct: 184 VCAHC 188 >gi|88703549|ref|ZP_01101265.1| DNA repair protein RecO [Congregibacter litoralis KT71] gi|88702263|gb|EAQ99366.1| DNA repair protein RecO [Congregibacter litoralis KT71] Length = 259 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 16/164 (9%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-----NGQSHRMQPILQAGNLVRVNWR 59 + +L R + + + +L+V + +GR LG V + + +LQ + +++ Sbjct: 6 EPCYLLHRRPFRDNSELLDVFSVAHGR-LGLVARGLSRRRRGGSLGAVLQPFRPLLLSFS 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL- 118 + L L +L L L R L E ++ + Sbjct: 65 GKGE--LLTLTGAESGGALPPLHGDAL-LSAFYLNELLLRLLQRFEEQPAIFTAYGAAIG 121 Query: 119 ------NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 N + +V+ + E LL+ +G+ ++L G Sbjct: 122 DLCDAANHEQERTVLEPALRRFEFRLLEELGYAVNLDVEASRGT 165 >gi|325677060|ref|ZP_08156730.1| recombination protein O [Rhodococcus equi ATCC 33707] gi|325552131|gb|EGD21823.1| recombination protein O [Rhodococcus equi ATCC 33707] Length = 296 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 69/187 (36%), Gaps = 18/187 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TRQ+G + + + + L+ + V Sbjct: 29 YRDYAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQLHP 88 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRF---LP--EREPCLELYDML 114 ++ + +++ A ++ YG + + L E+ P L+ + Sbjct: 89 GRNLDIVT-QVSTVDAFGADIVDD----YGRYTTACAILETAERLAGEEKAPVPRLHSLT 143 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAV 171 L + ++ + + LL+ +G+ LT C +GGAV Sbjct: 144 VGALRAVGDRTRPVELIL--DAYLLRAMGYAGWAPALTDCARCAAPGPHRAFHVAAGGAV 201 Query: 172 CRSVGLP 178 C P Sbjct: 202 CVHCRPP 208 >gi|293400672|ref|ZP_06644817.1| DNA repair protein RecO [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305698|gb|EFE46942.1| DNA repair protein RecO [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 243 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 70/183 (38%), Gaps = 17/183 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + + II+ + Y E + IL V+ R+ G R Q + P Q VR+ Sbjct: 1 MKDELEGIIIRYQEYREHDAILHVLCRKRGIVHVNARGIQKVKSKNAPACQLFTHVRMQL 60 Query: 59 RSRLAQNLGEFR------FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 L + + E LL S+ Y + I +F E + +++ Sbjct: 61 P--LQETRSIYTLRSAEIIEGYRHIREDLLKQSIAAYVCECIDA-SKF--EED----VFE 111 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 ++ L+ + + +I + ++ + G + CV G + + +S + GG +C Sbjct: 112 VVQTVLDILQETTHPIRILCLFQAIMNRMHGIEPYVDGCVRCGNQKAIYAISIRDGGFIC 171 Query: 173 RSV 175 S Sbjct: 172 HSC 174 >gi|284052146|ref|ZP_06382356.1| DNA repair protein RecO [Arthrospira platensis str. Paraca] Length = 286 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 7/125 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW---R 59 ++ IIL GE + +L ++T ++G + R + G V W + Sbjct: 5 YKATGIILKAIPLGESDRLLTILTPEFGLMRVVAPGARKSRSRLGGTTGLFVVNQWLIAK 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFL 118 R + + E++ SH + G L + L E +P EL+ +L+ L Sbjct: 65 GRSLDKI--TQAEIINSHSGLAKNLGKLAAGQYLAELVLSQALSE-QPQPELFLLLSEHL 121 Query: 119 NCHKI 123 + + Sbjct: 122 DRLEE 126 >gi|86606064|ref|YP_474827.1| DNA repair protein RecO [Synechococcus sp. JA-3-3Ab] gi|119361494|sp|Q2JQL5|RECO_SYNJA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86554606|gb|ABC99564.1| DNA repair protein RecO [Synechococcus sp. JA-3-3Ab] Length = 301 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 20/199 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH------RMQPILQAGNLVRV 56 ++ I L GE + I+ ++TR+ G + + RM+P + N + V Sbjct: 6 YRVTGINLKAMPLGEADRIITILTREQGLIRAVAKGSRKQLSKWGGRMEPFVV--NDLLV 63 Query: 57 ---NWRSRLAQNLGE---FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 W ++ + + E L+S S + +P EL Sbjct: 64 ARGRWSAQTDPSQCLQRIAQAETLQSFPRLGRSLAHLTAAQYLAEVALLLALPNQPQEEL 123 Query: 111 YDMLNIFLNCHKIP---SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPK 166 + +L L + + + V LL G + C G + SP Sbjct: 124 FVLLVEHLERIEQAPATEAVLPLLVHGLYHLLVVGGVAPSVQACYSCGEELAGEAFFSPH 183 Query: 167 SGGAVCRSVGLPYAEKMLV 185 +GG VC L A+++ Sbjct: 184 AGGLVCDPCRL--AQRLSP 200 >gi|226360360|ref|YP_002778138.1| DNA repair protein RecO [Rhodococcus opacus B4] gi|254764656|sp|C1AUI5|RECO_RHOOB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226238845|dbj|BAH49193.1| DNA repair protein RecO [Rhodococcus opacus B4] Length = 271 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 14/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D+A++L GE + I+ ++TRQ+G + + + + L+ + V + Sbjct: 4 YRDNAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQLYP 63 Query: 60 SRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNI 116 R NL + +++ ++ +I+ L ER P L+L+ + Sbjct: 64 GR---NLDIVTQVQTVDAFATDIVDDYTRYTTACAILETAERLAGEERAPALQLHRLTVG 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L ++ + + LL+ +GF L C +GGAVC Sbjct: 121 ALRAVAEHHRPCELIL--DAFLLRAMGFAGWAPALDDCARCSAPGPHRAFHVAAGGAVCV 178 Query: 174 SVGLP 178 P Sbjct: 179 QCRPP 183 >gi|312140282|ref|YP_004007618.1| DNA repair protein reco [Rhodococcus equi 103S] gi|311889621|emb|CBH48938.1| DNA repair protein RecO [Rhodococcus equi 103S] Length = 271 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 69/187 (36%), Gaps = 18/187 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TRQ+G + + + + L+ + V Sbjct: 4 YRDYAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRF---LP--EREPCLELYDML 114 ++ + +++ A ++ YG + + L E+ P L+ + Sbjct: 64 GRNLDIVT-QVSTVDAFGADIVDD----YGRYTTACAILETAERLAGEEKAPVPRLHSLT 118 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAV 171 L + ++ + + LL+ +G+ LT C +GGAV Sbjct: 119 VGALRAVGDRTRPVELIL--DAYLLRAMGYAGWAPALTDCARCAAPGPHRAFHVAAGGAV 176 Query: 172 CRSVGLP 178 C P Sbjct: 177 CVHCRPP 183 >gi|317485409|ref|ZP_07944288.1| DNA repair protein RecO [Bilophila wadsworthia 3_1_6] gi|316923368|gb|EFV44575.1| DNA repair protein RecO [Bilophila wadsworthia 3_1_6] Length = 256 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 61/183 (33%), Gaps = 46/183 (25%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP-------------- 46 M W D A++LGV + E ++ L ++TR++G F G R + Sbjct: 1 MEWSDTALVLGVGRFRESDLWLRMLTRRHGIVSAFAFGGSRSRKRFCGCLDLFNELQIST 60 Query: 47 ---------ILQAGNLVRVNWRSRLAQN-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVP 96 LQ GNL+R R R N LG F + + L Sbjct: 61 KTTRNGMYLSLQEGNLIRGPRRLRTDWNRLGMF---MNCVRFVEALGVP----------- 106 Query: 97 LFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTG 155 ++ ++ +L L + + I + L L G+ LT CV G Sbjct: 107 -------QDGAAGVFLLLKDTLELLEQSETVQDILPILFRLRLASQQGYAPALTACVSCG 159 Query: 156 VTQ 158 Sbjct: 160 KKD 162 >gi|21674907|ref|NP_662972.1| recombination/replication protein RecO, putative [Chlorobium tepidum TLS] gi|21648134|gb|AAM73314.1| recombination/replication protein RecO, putative [Chlorobium tepidum TLS] Length = 253 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 8/155 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS---RL 62 ++L Y +++ I ++TR+YG+ ++ G+S + + P+ GN++ R Sbjct: 1 MVLRDIKYRDQSKICLLLTREYGQVSVILKGGRSAKSRIGPLFSPGNVIDAVLYKKGNRD 60 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 Q L + + + L LY + ++ E + L+ + + + Sbjct: 61 IQFLSDASLVLSPLSESPDLDRFGVLYRVLDLIRYASTH--EEKNVPLFTITHSAIWRLC 118 Query: 123 IPSVIGKIFVQI-ELMLLKNIGFGLDLTKCVVTGV 156 + + L L+ +GF L +CV + Sbjct: 119 HAERNFQTILAWFLLRLVGVLGFAPSLDRCVFSNA 153 >gi|262373075|ref|ZP_06066354.1| DNA repair protein RecO [Acinetobacter junii SH205] gi|262313100|gb|EEY94185.1| DNA repair protein RecO [Acinetobacter junii SH205] Length = 235 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ + +S L Sbjct: 8 HGYLIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQASGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-------DMLNIFL 118 + E+L F G L R P E + L Sbjct: 62 --FTKLEILNQ--PVFFHGDAFFAGFYLNEILLRLCPLEEAMSHTFQQYQVILLQLQQLA 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + +I Q E +LL+ +G+ +D + Sbjct: 118 SHPQASVFLKQILRQFEHVLLQELGYAIDFS 148 >gi|281421055|ref|ZP_06252054.1| DNA repair protein RecO [Prevotella copri DSM 18205] gi|281404973|gb|EFB35653.1| DNA repair protein RecO [Prevotella copri DSM 18205] Length = 241 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 6/166 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L YG+ +I++ T + GR VR +S + + + Q ++ + Sbjct: 1 MEIKTSAIVLQAIKYGDSQLIVDFFTEKLGRLSFMVRVPKSSKGKMKRQLFQPLMVLNLE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE-REPCLELYDMLNI 116 + R NL R ++ + + S L + L + + LY + Sbjct: 61 FDYRPKSNLQRLRDVSIQIPFSDIPFSPYKLGISMFLAELLSYATRHEQANGALYLFIQD 120 Query: 117 FLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + F + + L ++GF ++ ++G DL+ Sbjct: 121 SIEWLDHAKGAIANFHIVFMIQLSFHLGFMPNIES-GMSGDYFDLV 165 >gi|254976027|ref|ZP_05272499.1| DNA repair protein [Clostridium difficile QCD-66c26] gi|255093415|ref|ZP_05322893.1| DNA repair protein [Clostridium difficile CIP 107932] gi|255101593|ref|ZP_05330570.1| DNA repair protein [Clostridium difficile QCD-63q42] gi|255307462|ref|ZP_05351633.1| DNA repair protein [Clostridium difficile ATCC 43255] gi|255315160|ref|ZP_05356743.1| DNA repair protein [Clostridium difficile QCD-76w55] gi|255517829|ref|ZP_05385505.1| DNA repair protein [Clostridium difficile QCD-97b34] gi|255650945|ref|ZP_05397847.1| DNA repair protein [Clostridium difficile QCD-37x79] gi|260684015|ref|YP_003215300.1| DNA repair protein [Clostridium difficile CD196] gi|260687675|ref|YP_003218809.1| DNA repair protein [Clostridium difficile R20291] gi|260210178|emb|CBA64370.1| DNA repair protein [Clostridium difficile CD196] gi|260213692|emb|CBE05562.1| DNA repair protein [Clostridium difficile R20291] Length = 257 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 6/153 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L Y E +IIL + TR+ G+ + + ++ + + N+ + N Sbjct: 7 QGIVLKAIRYKESDIILTLFTRKLGKVSAIAKGAKKNKSSLLSSSQLFSYSNFTLKKQGN 66 Query: 66 LGEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH- 121 + ++ E+++S F Y + + E + L+ +L L + Sbjct: 67 M--YKVTQSEIIKSFYNISYDIEAFSYATYITKLVENSILENQTNNRLFILLAQTLYLYT 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + I EL L IGF + KC+ Sbjct: 125 QDNTDNRFITAAFELKFLDYIGFKPIVNKCINC 157 >gi|255656414|ref|ZP_05401823.1| DNA repair protein [Clostridium difficile QCD-23m63] gi|296878520|ref|ZP_06902525.1| recombination protein O [Clostridium difficile NAP07] gi|296430327|gb|EFH16169.1| recombination protein O [Clostridium difficile NAP07] Length = 257 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 6/153 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L Y E +IIL + TR+ G+ + + ++ + + N+ + N Sbjct: 7 QGIVLKAIRYKESDIILTLFTRKLGKVSAIAKGAKKNKSSLLSSSQLFSYSNFTLKKQGN 66 Query: 66 LGEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH- 121 + ++ E+++S F Y + + E + L+ +L L + Sbjct: 67 M--YKVTQSEIIKSFYNISYDIEAFSYATYITKLVENSILENQTNNRLFILLAQTLYLYT 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + I EL L IGF + KC+ Sbjct: 125 QDNTDNRFITAAFELKFLDYIGFKPIVNKCINC 157 >gi|225548174|ref|ZP_03769459.1| hypothetical protein RUMHYD_00153 [Blautia hydrogenotrophica DSM 10507] gi|225040613|gb|EEG50859.1| hypothetical protein RUMHYD_00153 [Blautia hydrogenotrophica DSM 10507] Length = 250 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 12/179 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +++ GE + L ++TR+ G+ F + + P+L A N V L + Sbjct: 8 QGMVISAIPVGEYDKRLVLLTRERGKISAFAKGAR-RPNSPLLAAANP-FVLGSFTLYEG 65 Query: 66 LGEFRFE---VLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLE---LYDMLNIFL 118 + +G + + E + LY L L Sbjct: 66 RSSYTVNQAAPSHYFTELAQEQPGIYFGFYFLELADYYGREGVDAHETVNLLYVSLKALL 125 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 N ++ I+ E LL G + +CV ++L + S G VC + Sbjct: 126 NPKIPDELVRSIY---EFRLLVIQGEYPQIFQCVSCSREEELTYFSQSLHGMVCHNCRQ 181 >gi|126700051|ref|YP_001088948.1| DNA repair protein [Clostridium difficile 630] gi|119361453|sp|Q182C0|RECO_CLOD6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115251488|emb|CAJ69321.1| DNA repair protein RecO (Recombination protein O) [Clostridium difficile] Length = 257 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 6/153 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L Y E +IIL + TR+ G+ + + ++ + + N+ + N Sbjct: 7 QGIVLKAIRYKESDIILTLFTRKLGKVSAIAKGAKKNKSSLLSSSQLFSYSNFTLKKQGN 66 Query: 66 LGEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH- 121 + ++ E+++S F Y + + E + L+ +L L + Sbjct: 67 M--YKVTQSEIIKSFYNISYDIEAFSYATYITKLVENSILENQTNNRLFILLAQTLYLYT 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + I EL L IGF + KC+ Sbjct: 125 QDNTDNRFITAAFELKFLDYIGFKPIVNKCINC 157 >gi|298207087|ref|YP_003715266.1| possible DNA repair protein RecO [Croceibacter atlanticus HTCC2559] gi|83849721|gb|EAP87589.1| possible DNA repair protein RecO [Croceibacter atlanticus HTCC2559] Length = 238 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 18/168 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN-GQSHRMQP---ILQAGNLVRV 56 M AI++ YGE ++I+++ T G +R +S R + Q L+ V Sbjct: 1 MLVTTKAIVISALKYGEADLIVKLFTESSGLKSYLLRGILKSKRGKFRASQFQPLTLLEV 60 Query: 57 NWRSRLAQNLGEFRFEVLE-----SHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLEL 110 +A++ + E L + L + L + + L R + E E EL Sbjct: 61 -----VAKHKDKGTLETLRDAKILATYQTLHTDLLKSTVIMFLAELLRNAIQEEEKNPEL 115 Query: 111 YDMLN-IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + L FL K S + ++L L +GF + T + Sbjct: 116 FGFLETAFLWFDKYNSSNFHLLFLVKLSLF--LGFYPEGTNKNASFFN 161 >gi|295424886|ref|ZP_06817601.1| recombination protein O [Lactobacillus amylolyticus DSM 11664] gi|295065452|gb|EFG56345.1| recombination protein O [Lactobacillus amylolyticus DSM 11664] Length = 255 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 65/176 (36%), Gaps = 16/176 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---------GNLVRV 56 II + Y E +++ +++T++ G VR ++P Q G V Sbjct: 9 QGIIFKRQKYKEADLLAKIITKEDGIITLVVRGA----LRPKSQLNAATLNFSYGRYVIY 64 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R NL ++ ++ + + Y + + E +P + Y++ Sbjct: 65 T-NGRGLSNLRTYK--EVKQYDGLYNDLTKNAYASFILDLIDHAFVEYQPLGKYYELAKF 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + I +++ +LK G +L C++ G + S K GG +C Sbjct: 122 ALERINENTDPEMITQIVQMQMLKAYGVEPELRHCLICGKETGIFDYSIKLGGVIC 177 >gi|332291949|ref|YP_004430558.1| DNA repair protein RecO [Krokinobacter diaphorus 4H-3-7-5] gi|332170035|gb|AEE19290.1| DNA repair protein RecO [Krokinobacter diaphorus 4H-3-7-5] Length = 239 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 27/163 (16%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-QSHRMQ---PILQAGNLVRV 56 M + +AI+ YGE ++I++ T+ G +R +S + + + Q + + Sbjct: 1 MLVKTEAIVFSALKYGEADLIVKAFTKSSGLKSYLIRGVLKSKKGKLRVAMFQPLTHLEI 60 Query: 57 NWR------------SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER 104 +++ + EV +S ++ L + E Sbjct: 61 EANHKDKGTLESIREAKVVTHYTSLHTEVAKSAIVFFIAD-----------VLRSSVQEE 109 Query: 105 EPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 E + L+D + + + I + L L +GF D Sbjct: 110 EENVPLFDFIVNASLWLDLNNTIANFHLLFLLKLSSYLGFYPD 152 >gi|262203043|ref|YP_003274251.1| DNA repair protein RecO [Gordonia bronchialis DSM 43247] gi|262086390|gb|ACY22358.1| DNA repair protein RecO [Gordonia bronchialis DSM 43247] Length = 252 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 16/186 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D+A++L GE + I+ ++T ++G + + R + L+ V V+ + Sbjct: 4 YRDEAVVLRQHKLGEADRIITLLTAEHGLVRAVAKGVRRTRSKFGARLEPFAHVDVHLYP 63 Query: 60 SRLAQNLGEFRFEVLESH----CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 R + L ++ A + L++ L ER P +L+ + Sbjct: 64 GRNLD--VVTQVHSLHAYSDAIAADYGRYTTACAVLETAERLAGE--ERAPAPQLHRLTV 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + ++ LL+ + G+ L +C GGAVC Sbjct: 120 GALAALAE-DRRPRELI-LDAFLLRAMHCAGWMPALDECARCATPGPHRAFHVAVGGAVC 177 Query: 173 RSVGLP 178 P Sbjct: 178 LHCRPP 183 >gi|329667245|gb|AEB93193.1| DNA repair protein [Lactobacillus johnsonii DPC 6026] Length = 250 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 69/193 (35%), Gaps = 16/193 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNL------VRV 56 +I + Y E +++ ++MT+ +G VR +S L N V Sbjct: 9 QGLIFKRKKYKEADVLTKIMTKDHGIFTIDVRGALRPKSRLGAATL---NFSYGKYIVNT 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 NW+ L F+ ++ L + Y + L E + Y+++ Sbjct: 66 NWKG--ISTLRTFK--DVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYNLIMK 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L I ++L LL G L +C++ G Q + S + GG +C Sbjct: 122 ALLKINSGEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGVFDYSMELGGIICSDHF 181 Query: 177 LPYAEKMLVLPSF 189 +++M + P Sbjct: 182 NSVSQRMHLDPKV 194 >gi|209527697|ref|ZP_03276194.1| DNA repair protein RecO [Arthrospira maxima CS-328] gi|209491869|gb|EDZ92227.1| DNA repair protein RecO [Arthrospira maxima CS-328] Length = 298 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW---R 59 ++ IIL GE + +L ++T ++G + R + G V W + Sbjct: 5 YKATGIILKAIPLGESDRLLTILTPEFGLMRVVAPGARKSRSRLGGTTGLFVVNQWLIAK 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFL 118 R + + E++ SH + G L + L E +P EL+ +L+ L Sbjct: 65 GRSLDKI--TQAEIINSHSGLAKNLGKLAAGQYLAELVLSQALSE-QPQPELFLLLSEHL 121 Query: 119 NCHK 122 + + Sbjct: 122 DRLE 125 >gi|15609499|ref|NP_216878.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Rv] gi|15841874|ref|NP_336911.1| DNA repair protein RecO [Mycobacterium tuberculosis CDC1551] gi|31793539|ref|NP_856032.1| DNA repair protein RecO [Mycobacterium bovis AF2122/97] gi|121638241|ref|YP_978465.1| DNA repair protein RecO [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662194|ref|YP_001283717.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Ra] gi|148823565|ref|YP_001288319.1| DNA repair protein RecO [Mycobacterium tuberculosis F11] gi|167968759|ref|ZP_02551036.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Ra] gi|215404288|ref|ZP_03416469.1| DNA repair protein RecO [Mycobacterium tuberculosis 02_1987] gi|215412108|ref|ZP_03420872.1| DNA repair protein RecO [Mycobacterium tuberculosis 94_M4241A] gi|215431302|ref|ZP_03429221.1| DNA repair protein RecO [Mycobacterium tuberculosis EAS054] gi|215446606|ref|ZP_03433358.1| DNA repair protein RecO [Mycobacterium tuberculosis T85] gi|218754090|ref|ZP_03532886.1| DNA repair protein RecO [Mycobacterium tuberculosis GM 1503] gi|219558352|ref|ZP_03537428.1| DNA repair protein RecO [Mycobacterium tuberculosis T17] gi|224990735|ref|YP_002645422.1| DNA repair protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253798560|ref|YP_003031561.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN 1435] gi|254232504|ref|ZP_04925831.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254365139|ref|ZP_04981185.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254551409|ref|ZP_05141856.1| DNA repair protein RecO [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187365|ref|ZP_05764839.1| DNA repair protein RecO [Mycobacterium tuberculosis CPHL_A] gi|260201486|ref|ZP_05768977.1| DNA repair protein RecO [Mycobacterium tuberculosis T46] gi|260205663|ref|ZP_05773154.1| DNA repair protein RecO [Mycobacterium tuberculosis K85] gi|289443883|ref|ZP_06433627.1| DNA repair protein RecO [Mycobacterium tuberculosis T46] gi|289448004|ref|ZP_06437748.1| DNA repair protein RecO [Mycobacterium tuberculosis CPHL_A] gi|289553848|ref|ZP_06443058.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289570504|ref|ZP_06450731.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289575056|ref|ZP_06455283.1| DNA repair protein RecO [Mycobacterium tuberculosis K85] gi|289746140|ref|ZP_06505518.1| DNA repair protein recO [Mycobacterium tuberculosis 02_1987] gi|289754467|ref|ZP_06513845.1| DNA repair protein RecO [Mycobacterium tuberculosis EAS054] gi|289758486|ref|ZP_06517864.1| DNA repair protein recO [Mycobacterium tuberculosis T85] gi|289762528|ref|ZP_06521906.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294994534|ref|ZP_06800225.1| DNA repair protein RecO [Mycobacterium tuberculosis 210] gi|297634964|ref|ZP_06952744.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN 4207] gi|297731956|ref|ZP_06961074.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN R506] gi|298525844|ref|ZP_07013253.1| DNA repair protein recO [Mycobacterium tuberculosis 94_M4241A] gi|306776627|ref|ZP_07414964.1| hypothetical protein TMAG_02921 [Mycobacterium tuberculosis SUMu001] gi|306780400|ref|ZP_07418737.1| hypothetical protein TMBG_00906 [Mycobacterium tuberculosis SUMu002] gi|306785150|ref|ZP_07423472.1| hypothetical protein TMCG_00462 [Mycobacterium tuberculosis SUMu003] gi|306789511|ref|ZP_07427833.1| hypothetical protein TMDG_00840 [Mycobacterium tuberculosis SUMu004] gi|306793836|ref|ZP_07432138.1| hypothetical protein TMEG_02729 [Mycobacterium tuberculosis SUMu005] gi|306798233|ref|ZP_07436535.1| hypothetical protein TMFG_01326 [Mycobacterium tuberculosis SUMu006] gi|306804109|ref|ZP_07440777.1| hypothetical protein TMHG_01556 [Mycobacterium tuberculosis SUMu008] gi|306968510|ref|ZP_07481171.1| hypothetical protein TMIG_01039 [Mycobacterium tuberculosis SUMu009] gi|307080444|ref|ZP_07489614.1| hypothetical protein TMKG_00625 [Mycobacterium tuberculosis SUMu011] gi|307085039|ref|ZP_07494152.1| hypothetical protein TMLG_02110 [Mycobacterium tuberculosis SUMu012] gi|313659290|ref|ZP_07816170.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN V2475] gi|54039035|sp|P65984|RECO_MYCBO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54041795|sp|P65983|RECO_MYCTU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221897|sp|A1KL52|RECO_MYCBP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221901|sp|A5U555|RECO_MYCTA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764646|sp|C1AQS5|RECO_MYCBT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|2078037|emb|CAB08461.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13882140|gb|AAK46725.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31619132|emb|CAD97244.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121493889|emb|CAL72364.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601563|gb|EAY60573.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134150653|gb|EBA42698.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148506346|gb|ABQ74155.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Ra] gi|148722092|gb|ABR06717.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224773848|dbj|BAH26654.1| DNA repair protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253320063|gb|ACT24666.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN 1435] gi|289416802|gb|EFD14042.1| DNA repair protein RecO [Mycobacterium tuberculosis T46] gi|289420962|gb|EFD18163.1| DNA repair protein RecO [Mycobacterium tuberculosis CPHL_A] gi|289438480|gb|EFD20973.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289539487|gb|EFD44065.1| DNA repair protein RecO [Mycobacterium tuberculosis K85] gi|289544258|gb|EFD47906.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289686668|gb|EFD54156.1| DNA repair protein recO [Mycobacterium tuberculosis 02_1987] gi|289695054|gb|EFD62483.1| DNA repair protein RecO [Mycobacterium tuberculosis EAS054] gi|289710034|gb|EFD74050.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289714050|gb|EFD78062.1| DNA repair protein recO [Mycobacterium tuberculosis T85] gi|298495638|gb|EFI30932.1| DNA repair protein recO [Mycobacterium tuberculosis 94_M4241A] gi|308214946|gb|EFO74345.1| hypothetical protein TMAG_02921 [Mycobacterium tuberculosis SUMu001] gi|308326722|gb|EFP15573.1| hypothetical protein TMBG_00906 [Mycobacterium tuberculosis SUMu002] gi|308330135|gb|EFP18986.1| hypothetical protein TMCG_00462 [Mycobacterium tuberculosis SUMu003] gi|308333996|gb|EFP22847.1| hypothetical protein TMDG_00840 [Mycobacterium tuberculosis SUMu004] gi|308337777|gb|EFP26628.1| hypothetical protein TMEG_02729 [Mycobacterium tuberculosis SUMu005] gi|308341458|gb|EFP30309.1| hypothetical protein TMFG_01326 [Mycobacterium tuberculosis SUMu006] gi|308349255|gb|EFP38106.1| hypothetical protein TMHG_01556 [Mycobacterium tuberculosis SUMu008] gi|308353875|gb|EFP42726.1| hypothetical protein TMIG_01039 [Mycobacterium tuberculosis SUMu009] gi|308361766|gb|EFP50617.1| hypothetical protein TMKG_00625 [Mycobacterium tuberculosis SUMu011] gi|308365411|gb|EFP54262.1| hypothetical protein TMLG_02110 [Mycobacterium tuberculosis SUMu012] gi|323719029|gb|EGB28177.1| hypothetical protein TMMG_01654 [Mycobacterium tuberculosis CDC1551A] gi|326903978|gb|EGE50911.1| hypothetical protein TBPG_01867 [Mycobacterium tuberculosis W-148] gi|328458328|gb|AEB03751.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 265 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 63/185 (34%), Gaps = 20/185 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR- 59 ++D A++L GE + I+ ++TR +G + + R + L+ + V Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHP 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRF---LP--EREPCLELYDM 113 R +V+ + + YG + + L ER P L+ + Sbjct: 64 GRNLD----IVTQVVSVDAFA--TDIVADYGRYTCGCAILETAERLAGEERAPAPALHRL 117 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + + ++ LL+ +G LT+C +GG+ Sbjct: 118 TVGALRAVADGQ-RPRDLL-LDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGS 175 Query: 171 VCRSV 175 VC Sbjct: 176 VCAHC 180 >gi|299769160|ref|YP_003731186.1| DNA repair protein RecO [Acinetobacter sp. DR1] gi|298699248|gb|ADI89813.1| DNA repair protein RecO [Acinetobacter sp. DR1] Length = 237 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L +V R P E + ++ + L+ Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLNEVV--LRLCPLEETMPQTFEQYQLTLLQLQQLS 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 H+ P + + ++ E +LL +G+ LD + Sbjct: 118 SHENPDLFLRQILRQFEHILLPELGYALDFS 148 >gi|77359685|ref|YP_339260.1| DNA repair protein recO (recombination protein O) [Pseudoalteromonas haloplanktis TAC125] gi|123587133|sp|Q3IDL0|RECO_PSEHT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|76874596|emb|CAI85817.1| DNA repair protein recO (Recombination protein O) [Pseudoalteromonas haloplanktis TAC125] Length = 230 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 9/147 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A +L R Y + ++L+++ G+ R Q+ + + LQ + V++ + Sbjct: 8 AYLLHRRPYSDSQVMLDMLVEGVGQLRMLARISGRQATKHKAQLQPFQALLVHYNGKYD- 66 Query: 65 NLGEF-RFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L +FE+ H L LY G R +P EP +++ + N L Sbjct: 67 -LKYINKFEL---HGTPLFLKGDELYCGFYLNELTNRIVPINEPIDQVFQLYNTHLKNLN 122 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + E LL+ +G+G+D + Sbjct: 123 SGANLQAVLRSYEFQLLELLGYGVDFS 149 >gi|313676335|ref|YP_004054331.1| DNA repair protein reco [Marivirga tractuosa DSM 4126] gi|312943033|gb|ADR22223.1| DNA repair protein RecO [Marivirga tractuosa DSM 4126] Length = 229 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 62/157 (39%), Gaps = 16/157 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAGNLVRVN 57 M + I+LG YGE ++I++V T ++G VR ++ I Q L+ + Sbjct: 1 MLHKTKGIVLGHVKYGESSLIIQVYTEKFGIQSYIENGVRKAKAKHKMAIFQPLTLLDLV 60 Query: 58 WRSRLAQN---LGEFRFE-VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + + + E + + +++ SS+ ++ + + + R E E ++ Sbjct: 61 VYKKANSSINRMSEIKVNPPYRTIPYEIIKSSIGIFLAEFLNHILRG--EEEDNPVMFGF 118 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKN----IGFGL 146 ++ L G+ ++ L L +GF Sbjct: 119 IHDSLTYFDQK---GEDYINFHLQFLAQLTTYLGFKP 152 >gi|268319373|ref|YP_003293029.1| DNA repair protein RecO [Lactobacillus johnsonii FI9785] gi|262397748|emb|CAX66762.1| DNA repair protein RecO [Lactobacillus johnsonii FI9785] Length = 250 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 68/192 (35%), Gaps = 16/192 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNL------VRV 56 +I + Y E +++ ++MT +G VR +S L N V Sbjct: 9 QGLIFKRKKYKEADVLTKIMTEDHGIFTIDVRGALRPKSRLGAATL---NFSYGKYIVNT 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 NW+ L F+ ++ L + Y + L E + YD++ Sbjct: 66 NWKG--ISTLRTFK--DVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKNIGSFYDLIMK 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L I ++L LL G L +C++ G Q + S + GG +C Sbjct: 122 ALLKINSGEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGVFDYSMELGGIICSDHF 181 Query: 177 LPYAEKMLVLPS 188 +++M + P Sbjct: 182 NSVSQRMHLDPK 193 >gi|299783169|gb|ADJ41167.1| DNA repair protein recO (Recombination protein O) [Lactobacillus fermentum CECT 5716] Length = 255 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 66/188 (35%), Gaps = 12/188 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQA---GNLVRVNWRS 60 + +I+ R Y E++++++++T + G + FVR + ++ + G+ V + Sbjct: 9 EGVIMYRRDYRERDLLVKILTDRCGPLMFFVRGAKRKGFKLASDILPFTYGSYVGIL--- 65 Query: 61 RLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L + + Y + + + E Y + LN Sbjct: 66 -ADEGLSYIVSAQETHHLTGIGADLNRNAYATYLLELVDQAFEEGRALGGWYKQVMAALN 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC--RSVGL 177 + +E+ LL G +CVV G + L S K GG +C Sbjct: 125 LINTGRDPQVVVNVLEVQLLNRFGIAPVWDRCVVCGRSDLPLDYSEKMGGMLCLHHFAED 184 Query: 178 PYAEKMLV 185 PY + Sbjct: 185 PYRFHLTP 192 >gi|258647684|ref|ZP_05735153.1| DNA repair protein RecO [Prevotella tannerae ATCC 51259] gi|260852513|gb|EEX72382.1| DNA repair protein RecO [Prevotella tannerae ATCC 51259] Length = 240 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 11/157 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + I++V+TR+ G FVR + R Q V + Sbjct: 1 MLIKSRGIVLHTLKYNDAGCIVDVLTREEGFQSFFVRISRGKRGGLKSAFFQPLTAVDIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W + NL R + H L + + R EP + + Sbjct: 61 WNHKPTSNLQTLR--SVSPHPMLGLERPEKITLALFLAEFLRTALRSEPIAAP--LFDYT 116 Query: 118 LNCHKIPSVIGKIFVQIELMLL----KNIGFGLDLTK 150 + + ++ + F L+ L +GF +L Sbjct: 117 WDSIEWLNLSEQHFSNFHLVFLLRMTHFLGFYPNLAN 153 >gi|73662499|ref|YP_301280.1| recombination protein O [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|92087035|sp|Q49Y09|RECO_STAS1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|72495014|dbj|BAE18335.1| putative recombination protein O [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 251 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 68/189 (35%), Gaps = 15/189 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQA---GNLVR 55 M + II+ YGE + I+ ++ + VR + + +Q Q G + Sbjct: 1 MLIKQKGIIIKTIDYGESDKIITILNEYGAKVPLMVRRAKKSKSGLQANTQLFVYGLFIY 60 Query: 56 VNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 W+ +G +V++ + L Y + R + Y++L Sbjct: 61 SKWKG-----MGTLSSVDVIDQNYHLRLDIYESSYASLCTETIDRSMETDGISKNSYELL 115 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVC 172 + L+ + + V + L + GF +CV+T L+ S K GA+ Sbjct: 116 HFVLDKIRQGISAQLMSVVVLLKCMTKFGFNAVFDRCVITQSEDQSKLVGYSFKYDGAIS 175 Query: 173 RSVGLPYAE 181 +V Y + Sbjct: 176 ENVA--YKD 182 >gi|168704036|ref|ZP_02736313.1| probable DNA repair protein recO [Gemmata obscuriglobus UQM 2246] Length = 308 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 69/248 (27%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP-------------ILQA 50 + AI+ + E + I + TR++G+ + G+ + ++ Sbjct: 5 KALAIVTRGTDWSETSRITTLFTREFGKIRALAKGGRRLKSNFDVAFDLLTVCEVVFIRK 64 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYG---------LQSIVPLFRFL 101 + + + +R+ + R + + ++ L + + + R L Sbjct: 65 ASGLELLTEARMNEQFPALRKNLPALYAGYYVAELLAEGLQDYDPHPVLFDAALAILRAL 124 Query: 102 -------PERE--------------PCLELYDMLNIFLNCHKIPSVIGKIFVQ------- 133 PERE + P V G V+ Sbjct: 125 GRTAVFYPEREGSTGAEEEGAVREGEGAPVSQAAGADSPVELGPEVNGARSVERTAPLRT 184 Query: 134 ---------------IELMLLKNIGFGLDLTKCVVTGVT----QDLLWVSPKSGGAVCRS 174 EL+ L+ +G+ L C G + SP +GG +C Sbjct: 185 EAGGGKGSLLATVSAFELVWLQELGYSPRLDACATCGRERLSPTARAFFSPLAGGVLCPE 244 Query: 175 VGLPYAEK 182 G A++ Sbjct: 245 CGPAVADR 252 >gi|120437510|ref|YP_863196.1| DNA repair protein RecO [Gramella forsetii KT0803] gi|254764634|sp|A0M684|RECO_GRAFK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|117579660|emb|CAL68129.1| DNA repair protein RecO [Gramella forsetii KT0803] Length = 239 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 5/153 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-QSHRMQP---ILQAGNLVRV 56 M AII+ YGE ++I++ T G ++ +S + + + Q+ + + Sbjct: 1 MLIHTKAIIISALKYGEADLIVKAYTLSDGLCTYMLKGVLKSRKGKFKASMFQSLTQLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLN 115 R + + + + L + + L + + + R + E E L+ L Sbjct: 61 VANHRGGGKMEYLKEAKVTGNYQSLHTHPIKLAMVMFLAEMLRNAIREEESNEPLFHYLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 I + L L + +GF ++ Sbjct: 121 YSFQFLDSTDKIANFHLLFLLNLTRYLGFQPEM 153 >gi|295099667|emb|CBK88756.1| DNA repair protein RecO [Eubacterium cylindroides T2-87] Length = 244 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 69/185 (37%), Gaps = 15/185 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 + I+L V+ Y E + I+ ++T+ R Q + + I Q + VR + Sbjct: 8 EGIVLSVQDYRESDGIIRLLTQDK-ILSILARGIQKQTSKNRMITQVFSHVRYTIEQK-E 65 Query: 64 QNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCH 121 L + V++SH K++ + SI L + +Y + + L Sbjct: 66 NGLSLLYYGNVIDSH-YKIMEDLMK----SSICFVLAEVITRFHGNPTIYMLFDKCLKEF 120 Query: 122 KIPSVIGKIFVQIELM-LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + L +++ G + C++ L +S GG +C + Sbjct: 121 QNDDAKAYNYACLLLAQIIQKEGIAPFVDGCILCKRKDHLETLSVTDGGFLCTTCNH--- 177 Query: 181 EKMLV 185 +++L Sbjct: 178 DRILP 182 >gi|41408240|ref|NP_961076.1| DNA repair protein RecO [Mycobacterium avium subsp. paratuberculosis K-10] gi|61215113|sp|Q73Y16|RECO_MYCPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|41396595|gb|AAS04459.1| hypothetical protein MAP_2142c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 265 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR +G + + R + L+ + Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + +++ ++S +++ L ER P L+ + L Sbjct: 64 GRNLDIVT-QVVSIDAFATDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVSAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCV 152 + + + LL+ +G LT+C Sbjct: 123 RAVADGRRSRDLLL--DAYLLRAMGIAGWAPALTECA 157 >gi|326794407|ref|YP_004312227.1| DNA repair protein RecO [Marinomonas mediterranea MMB-1] gi|326545171|gb|ADZ90391.1| DNA repair protein RecO [Marinomonas mediterranea MMB-1] Length = 243 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 60/162 (37%), Gaps = 25/162 (15%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV----RVNWRS 60 ++ R++ E ++++++T + G +R S + +L G + V+ R Sbjct: 3 ARGYVIHTRTFQENKVLIDILTAEAGLLRTVLR--VSKKEAQVL-PGPFLRYELEVSGRG 59 Query: 61 -----RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + + +G FRFE L + A + L + +P P L+ + Sbjct: 60 ELKTLKSIEGVGAAFRFEGLYLYSAMYIHE-----------ILEKVVPLNLPLENLFALY 108 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +N I + + E L +G +++ TG Sbjct: 109 EWLINGFNDQLPIAPVLRRFEAGLFDEVGMSINMGS-TATGQ 149 >gi|71279899|ref|YP_270775.1| recombination protein O [Colwellia psychrerythraea 34H] gi|71145639|gb|AAZ26112.1| recombination protein O [Colwellia psychrerythraea 34H] Length = 236 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 13/129 (10%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 A +L R Y E +++++T Q G+ V GQS R + ++Q +++ + Sbjct: 6 AFVLHSRPYRENQQLVDLLTEQDGKVTALVYVGQSKRSIKKGLIQPFLPLKLTLK----- 60 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSI----VPLFRFLPEREPCLELYDMLNIFLNC 120 G+ + + + S SL Y L S L R L E+ C L+ L Sbjct: 61 --GQGNVKYITQIDSISKSYSLVKYSLFSSFYINELLIRLLTEQIACQHLFSQYQTTLTA 118 Query: 121 HKIPSVIGK 129 I Sbjct: 119 LAQGEEIAP 127 >gi|166032678|ref|ZP_02235507.1| hypothetical protein DORFOR_02393 [Dorea formicigenerans ATCC 27755] gi|166027035|gb|EDR45792.1| hypothetical protein DORFOR_02393 [Dorea formicigenerans ATCC 27755] Length = 246 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 30/190 (15%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA---GNLVRV 56 ++L G+ + + ++T++ G+ F R + + + + G V Sbjct: 3 QITVTGMVLSATPVGDYDRRVVLLTKERGKIAAFARGARRTNSSLLGVTSPFSFGEFVVY 62 Query: 57 NWR-------SRLAQNLGEFRFEVLESHCAKLLSSSLFLYG--LQSIVPLFRFLPEREPC 107 R + ++ E R +V ++ Y L + L Sbjct: 63 EGRTSYTLMSASISNYFSELRTDVEGAYYGFYFLDFAGYYAREANDETELLKLL------ 116 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 Y L N H I ++ EL + G G + +CV G ++ + S Sbjct: 117 ---YQTLRALTNVH-----IPNRLIRCIYELKAVCINGEGPQVFECVSCGRWEENMKFSV 168 Query: 166 KSGGAVCRSV 175 + GG VCR Sbjct: 169 RKGGLVCRKC 178 >gi|50955078|ref|YP_062366.1| DNA repair protein RecO [Leifsonia xyli subsp. xyli str. CTCB07] gi|61214918|sp|Q6AED5|RECO_LEIXX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|50951560|gb|AAT89261.1| single-stranded DNA binding protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 249 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 6/158 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVN-WR 59 ++D+A++L GE + I+ +++RQ+G+ + + + L+ + V + Sbjct: 4 YRDEAVVLRTHKLGEADRIVTMLSRQHGKIRAVAKGVRRTASRFGSRLEPFMVADVQLYE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + E + ++ A + ++V L + E L+ Y +L L Sbjct: 64 GRSLD--VVTQAETIGAYGAAIAEDYASYTAANAMVEAADRLTDAEASLQQYLLLVGALR 121 Query: 120 CHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGV 156 + + L +L G+ C G Sbjct: 122 SLSRGEHGPGLTLDSYLLRVLSLAGWAPSFQDCSRCGR 159 >gi|86143723|ref|ZP_01062099.1| DNA repair protein [Leeuwenhoekiella blandensis MED217] gi|85829766|gb|EAQ48228.1| DNA repair protein [Leeuwenhoekiella blandensis MED217] Length = 238 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 15/160 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV-RNGQSHRMQ---PILQAGNLVRV 56 M AI++ YGE ++I+ T + G + R +S + + + Q + + + Sbjct: 1 MLVTTKAIVISAIKYGEADLIVRCFTEEAGLKSYILQRILKSKKGKLRTAMFQPASQLEL 60 Query: 57 NWRSRLAQNLGEFRFEVLESH-----CAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLEL 110 +A + + E + L + L + + + R + E E L Sbjct: 61 -----VAVHKDKGTLESIREAKVIQPYVSLHTDVLKSSVVLFLSEMLRNAIQEEEENRAL 115 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 Y L + + L L K +GF D ++ Sbjct: 116 YAFLEHAFLWFDLHEQTANFHLLFLLELTKYLGFYPDTSE 155 >gi|332977454|gb|EGK14229.1| recombination protein O [Psychrobacter sp. 1501(2011)] Length = 285 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 38/178 (21%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-----------QSHRMQPILQAGNLVR 55 A L R Y EK I ++T+++G G + G + LQ N+V Sbjct: 8 AYSLHQRPYQEKRSIYYLLTKEHGVLHGIAKKGIPQFVPLTLFATGKKSLKTLQQVNIVE 67 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + +G+ + + A L+ + LP + +Y+ + Sbjct: 68 A-----VPSLMGQ------QQYAALYLNE-----------ITLKLLPVEDSMPVVYEQYS 105 Query: 116 IFLNCHKIP---SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL--WVSPKSG 168 + + P + + E +L +GF +D + V + + +P G Sbjct: 106 RTIRQLQQPLSLDQLKLVLRLYEQVLFSELGFAIDFEQDSEQAVIDENQWYYFAPDRG 163 >gi|325831459|ref|ZP_08164713.1| DNA repair protein RecO [Eggerthella sp. HGA1] gi|325486713|gb|EGC89161.1| DNA repair protein RecO [Eggerthella sp. HGA1] Length = 256 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 13/194 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-R 59 + AI+L GE ++IL ++ + + + L+ ++V + R Sbjct: 6 YDARAIVLRKTKLGESDLILTLLAEDGSQMRAVAKGARKPASSFAARLELYSVVDLLVAR 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + E R + + L R L+ + L+ Sbjct: 66 GRSLDIVKEARLVESNERLRRDIE--HAAGAAPMAELLDRVTQMGLENPRLFALTRTALS 123 Query: 120 CHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV------TQDLLWVSPKSGGAV 171 P+ + + L L G L CV G L+ +S + GGAV Sbjct: 124 SLGRVDPAQVPAVCAAHLLKTLAFAGLRPSLDACVSCGRDVEAVPESGLMALSYQEGGAV 183 Query: 172 CRSVGLPYAEKMLV 185 C + ++ Sbjct: 184 CAACRSSVETVLVP 197 >gi|183221473|ref|YP_001839469.1| DNA repair protein RecO [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911560|ref|YP_001963115.1| recombinational DNA repair protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|254764639|sp|B0SB31|RECO_LEPBA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764640|sp|B0SSV3|RECO_LEPBP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167776236|gb|ABZ94537.1| Recombinational DNA repair protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779895|gb|ABZ98193.1| DNA repair protein RecO (Recombination protein O) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 249 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 20/199 (10%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL--QAGNLVRVN---- 57 ++ II+ + GE + ++ + R + + + + I+ + G LV V+ Sbjct: 5 KEIGIIIQSKDIGESDRLISLAGETQVRMNFISKGIRKSKRRAIISTELGCLVEVDYYDQ 64 Query: 58 ----WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 W+S +L + E+ + + L + L + + P+ E LY + Sbjct: 65 VEKDWKSTKEIHLIKRYDELKKDYVGTLF-----VLYLTELTS--QLYPDGENHPFLYQL 117 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGA 170 L+ L +I +L L ++G C G T+ + S S Sbjct: 118 LSGSLEVSNENGFRKEILPFFKLRALTHMGHFPTEFYCHTCGEEVLTKAKAYFSVDSREF 177 Query: 171 VCRSVGLPYAEKMLVLPSF 189 +C + + VL F Sbjct: 178 LCSDCHPITKDHLPVLKLF 196 >gi|260893580|ref|YP_003239677.1| DNA repair protein RecO [Ammonifex degensii KC4] gi|260865721|gb|ACX52827.1| DNA repair protein RecO [Ammonifex degensii KC4] Length = 246 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 69/193 (35%), Gaps = 18/193 (9%) Query: 1 MYWQ-DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRV 56 M W + ++L V E + +L + + + G+ L G +S + L R Sbjct: 1 MQWSCAEGVVLRVSPVREADRLLTIFSLERGKLLATAFGGARPRSRKRAATL-PFCRARF 59 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + + E+LE L L Y + F P EP LY +L Sbjct: 60 FLKRRGDNYQVD-QAELLE-RFPGLAHPRLLGYAGYLAEVVEGFSPLEEPNAPLYRLLVS 117 Query: 117 FLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS-----GGA 170 L + P ++ + F L LL+ G ++T C W PK+ GG Sbjct: 118 SLRWLRQNPELVAQAFC---LKLLRLGGLAPEMTACSSCQRPFSPDW--PKAYFSLPGGL 172 Query: 171 VCRSVGLPYAEKM 183 +C S + Sbjct: 173 LCPSCATGERASL 185 >gi|254514116|ref|ZP_05126177.1| DNA repair protein RecO [gamma proteobacterium NOR5-3] gi|219676359|gb|EED32724.1| DNA repair protein RecO [gamma proteobacterium NOR5-3] Length = 258 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 16/164 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVRVNWRS 60 +L R + + + +L+V + +YGR LG + G S R + +LQ + +++ Sbjct: 7 PCYLLHRRPFRDNSELLDVFSVEYGR-LGLIARGLSRRRRGGPLGALLQPFRPLLLSFSG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L A L +L L L R L E L+ + Sbjct: 66 KGE--LLTLTGAESGGELAPLHGEAL-LSAFYLSELLLRLLQRFEVQPALFTAYGAAIAD 122 Query: 121 HKIPSVIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + G + E LL+ +G+ +DL+ G Sbjct: 123 LSDVASTGNARLSLEPALRRFEFRLLEELGYAVDLSTDASCGAV 166 >gi|167753894|ref|ZP_02426021.1| hypothetical protein ALIPUT_02179 [Alistipes putredinis DSM 17216] gi|167658519|gb|EDS02649.1| hypothetical protein ALIPUT_02179 [Alistipes putredinis DSM 17216] Length = 245 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 8/149 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRVNW 58 ++ I+L YG+ +++ ++T GR V+ +S R + + Q + Sbjct: 8 YKARGIVLNSLKYGDSAMVVHLLTDALGRQSYMVQGVRSSRGRGSKLALFQPMFALEFEG 67 Query: 59 RSRLAQNLGEFRFEVLESHCAKLL--SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + Q + FR EV + + L L+R + E EP +L+D + Sbjct: 68 LTSSRQQMHRFR-EVQSGIVLQRMPFDVRRSTIALFMAEVLYRLVKESEPDSQLFDFVWE 126 Query: 117 FLNCHKI-PSVIGKIFVQIELMLLKNIGF 144 + + + + L + +GF Sbjct: 127 SIGALDSMEEGVANFHLWFLVNLSRFLGF 155 >gi|327403370|ref|YP_004344208.1| DNA repair protein recO [Fluviicola taffensis DSM 16823] gi|327318878|gb|AEA43370.1| DNA repair protein recO [Fluviicola taffensis DSM 16823] Length = 235 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 18/157 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M QD AI+L Y E ++I+ + T + G + + + IL + + + Sbjct: 1 MKIQDKAIVLSRSPYSESSLIVNLFTLESGLQTFLFQGARKKKGL-ILFPLEIAEITYYK 59 Query: 61 RLAQNLGEFR----FEVLESHCAKLLSSSLF--LYGLQSIVPLFRFLPEREPC--LELYD 112 R +L + E L L SS+ + L I R+ +L+ Sbjct: 60 RNDSSLLKLTEMQALEPLHELVGNPLKSSIAFFISELLLICL-------RDNHQDKKLFH 112 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNI-GFGLDL 148 LN ++ + ++ L + + GF ++ Sbjct: 113 FLNEEIHWLNTSEELSN-YLIWLLAQVSKLEGFQPEI 148 >gi|317490527|ref|ZP_07949005.1| DNA repair protein RecO [Eggerthella sp. 1_3_56FAA] gi|316910378|gb|EFV32009.1| DNA repair protein RecO [Eggerthella sp. 1_3_56FAA] Length = 256 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 13/194 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-R 59 + AI+L GE ++IL ++ + + + L+ ++V + R Sbjct: 6 YDARAIVLRKTKLGESDLILTLLAEDGSQIRAVAKGARKPVSSFAARLELYSVVDLLVAR 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + E R + + L R L+ + L+ Sbjct: 66 GRSLDIVKEARLVESNERLRRDIE--HAAGAAPMAELLDRVTQMGLENPRLFALTRTALS 123 Query: 120 CHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV------TQDLLWVSPKSGGAV 171 P+ + + L L G L CV G L+ +S + GGAV Sbjct: 124 SLGRVDPAQVPAVCAAHLLKTLAFAGLRPSLDVCVSCGRDVEAVPESGLMALSYQEGGAV 183 Query: 172 CRSVGLPYAEKMLV 185 C + ++ Sbjct: 184 CAACRSSVETVLVP 197 >gi|91215439|ref|ZP_01252410.1| DNA repair protein [Psychroflexus torquis ATCC 700755] gi|91186391|gb|EAS72763.1| DNA repair protein [Psychroflexus torquis ATCC 700755] Length = 239 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 7/159 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH---RMQ-PILQAGNLVRV 56 M + AI++ +GE ++I++ T + G ++ + RM+ + Q L+ + Sbjct: 1 MQLKTKAIVISNVKFGEADLIVKCFTLEKGVVSFMLKGIRKSKKGRMRVSLFQPLTLLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDML 114 + +NL + EV + + L + + + L + E E L+ L Sbjct: 61 EATYKENKNLQYLK-EVKVDYPLQTLHTDIFKSTVVMFLAEVLKSSIQEEEKNESLFQFL 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 L I + + L +GF D + Sbjct: 120 KESLIYLDQVDSIKNFHLHFIVKLTSFLGFSPDQSSEAF 158 >gi|223985699|ref|ZP_03635746.1| hypothetical protein HOLDEFILI_03052 [Holdemania filiformis DSM 12042] gi|223962310|gb|EEF66775.1| hypothetical protein HOLDEFILI_03052 [Holdemania filiformis DSM 12042] Length = 250 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 69/184 (37%), Gaps = 8/184 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +A+IL + Y E + ++ V+++ YG+ R + + + V + Sbjct: 7 EAVILKQQDYRENDALITVLSKDYGKLGFVCRGIRKMASKNAVSCMPFVLSELMFDYKEQ 66 Query: 66 LGEFRFEVLESHCA--KLLSSSLFLYGLQSIVPLFRFLPER-----EPCLELYDMLNIFL 118 F + A + + Q + + L E+ E E+Y++L++ L Sbjct: 67 ATLFSLKSARVLAAHRHIREDLEKMTIAQVMCEIADKLLEQGESDLEAAGEVYELLSVSL 126 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + I Q + LK G + +CV+ TQ + +S + GG +C Sbjct: 127 DRLDSETDSYLILAQFTALALKTEGIEPVVDECVLCSNTQ-VQTISVEDGGFLCAECAAM 185 Query: 179 YAEK 182 + Sbjct: 186 VHAR 189 >gi|24372928|ref|NP_716970.1| DNA repair protein RecO [Shewanella oneidensis MR-1] gi|24347064|gb|AAN54415.1|AE015579_4 DNA repair protein RecO [Shewanella oneidensis MR-1] Length = 233 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 13/147 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E + ++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSALVNLLVDGIGRVDAVARVGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFL---PEREPCLELYDMLNIFLNCH 121 +E+ + S LY G+ L R L E +Y + L Sbjct: 62 --LKNISQIEAAAPAVPLSGYSLYAGMYINELLMRTLSVQHNAEALFFIYHQALVGLAA- 118 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDL 148 +EL LL+ +G L Sbjct: 119 ---QFCESKLRYLELALLRELGAMPSL 142 >gi|239906719|ref|YP_002953460.1| putative DNA repair protein [Desulfovibrio magneticus RS-1] gi|259563677|sp|C4XS52|RECO_DESMR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|239796585|dbj|BAH75574.1| putative DNA repair protein [Desulfovibrio magneticus RS-1] Length = 249 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 16/166 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNW 58 M + D A+IL V+ + E + + +++ G + F G R + + L N V+ Sbjct: 1 MEYSDQALILAVKRFREIDAWVRLLSPTRGVYTAFAFGGLKSRRRFLGCLDPLNHVQFKV 60 Query: 59 RSR--------LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 R R LA+ L SH +L + L ++ + L Sbjct: 61 R-RSGYRGYHCLAEGKLLDAPRQLRSHPQRLGMAVNCLKFFEAAPVAPGSFAQA---YGL 116 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + L+ PS + + + + L G +C V G Sbjct: 117 MRAMLSTLDAADEPSPLFPLLFRARMTFLH--GMLPACGQCAVCGQ 160 >gi|303235629|ref|ZP_07322236.1| DNA repair protein RecO [Prevotella disiens FB035-09AN] gi|302484076|gb|EFL47064.1| DNA repair protein RecO [Prevotella disiens FB035-09AN] Length = 241 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 68/204 (33%), Gaps = 42/204 (20%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR---NGQSHRMQPILQAGNLVR-- 55 M + I+L YG+ +I++V+T GR VR + + Q L+ Sbjct: 1 MNTKTRGIVLRSVRYGDAKLIIDVLTELSGRISFAVRVPKTAKGKLKRQYFQPMTLLDME 60 Query: 56 VNWRSRLAQN--------LGEFRF--EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE 105 WR R L E ++S LL + FLY + R+ Sbjct: 61 YEWRERNTLQNMKDVRIALPYTSIPFEPVKST--MLLFLAEFLYYVT-----------RD 107 Query: 106 PCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLL----KNIGFGLDLTKCVVTGVTQDLL 161 + N N + K + L+ + K +GF L + TQ Sbjct: 108 EQQNA-TLFNYIYNSLEWLDNSEKDYANFHLVFMIRLGKFLGFQPYLEE-----YTQG-A 160 Query: 162 WVSPKSGGAVCRSVGLPYAEKMLV 185 + ++G C + LP+ L Sbjct: 161 YFDLRNG---CFTSSLPFHADYLP 181 >gi|167623019|ref|YP_001673313.1| DNA repair protein RecO [Shewanella halifaxensis HAW-EB4] gi|167353041|gb|ABZ75654.1| DNA repair protein RecO [Shewanella halifaxensis HAW-EB4] Length = 251 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 47/151 (31%), Gaps = 15/151 (9%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA 63 + +L R + + ++I+ ++ GR R + ++ ILQ + + + Sbjct: 24 ERGYVLHSRHFRDSSVIVNLLVDGKGRVDAVARLGSAKNSIRSILQPFQPLIFQLQGKSE 83 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELY----DMLNIFL 118 L + S L LY GL L R L + L+ L Sbjct: 84 --LKTLKQTEAASPAVPLTGD--CLYSGLYLNELLIRCLSGQHNAENLFFDYHRTLIAMA 139 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + E LL+ +G L Sbjct: 140 TKFDQSQLRY-----FEHALLRELGTMPSLD 165 >gi|315604782|ref|ZP_07879842.1| DNA repair protein RecO [Actinomyces sp. oral taxon 180 str. F0310] gi|315313511|gb|EFU61568.1| DNA repair protein RecO [Actinomyces sp. oral taxon 180 str. F0310] Length = 245 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 62/186 (33%), Gaps = 16/186 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++D+AI+L GE + I+ ++T ++G+ + + + + ++ +++ R Sbjct: 4 YRDEAIVLRTHKLGEADRIITLLTAEHGQVRSVAKGVRRTTSKFGARVEPFSVIDAQLHR 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER---EP----CLELYD 112 R L + + A+ + Y L + ER + + Sbjct: 64 GRTLDTLTQV------ASIAQYGDAIAANYDLYLAATVIVETAERLTTDATDGTHSQYLL 117 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 +L + I L L G+ C + G S GG VC Sbjct: 118 LLGALNALARSRHDPTLIRTSYTLRALALAGWAPSCFDCAICGSKGPHGSFSIPDGGTVC 177 Query: 173 RSVGLP 178 + P Sbjct: 178 DTCRPP 183 >gi|15894578|ref|NP_347927.1| DNA repair protein RecO [Clostridium acetobutylicum ATCC 824] gi|15024225|gb|AAK79267.1|AE007641_13 Hypothetical protein CA_C1309 [Clostridium acetobutylicum ATCC 824] Length = 218 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 11/156 (7%) Query: 30 GRHLGFVRNGQSHRMQ--PILQA---GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSS 84 G+ R + +R + PI GN V +S + N G E+++S L Sbjct: 2 GKISVIARGAKKNRSKYLPITINFCFGNFVFFKGKSMFSLNEG----EIIDSFQEFLSDF 57 Query: 85 SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIG 143 Y + + E E +L+ K + + EL LL+ G Sbjct: 58 DTLTYCSYLCELIDISMAEGESNRDLFKEFVSTFYLIKNKVGDIETLSRAFELKLLRYTG 117 Query: 144 FGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSVGLP 178 + L+L C + ++S K G +C Sbjct: 118 YNLNLDYCSKCKKRINSASYISYKYYGGICGDCSKE 153 >gi|240145040|ref|ZP_04743641.1| DNA repair protein RecO [Roseburia intestinalis L1-82] gi|257202865|gb|EEV01150.1| DNA repair protein RecO [Roseburia intestinalis L1-82] Length = 254 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 43/223 (19%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L V G+ + + ++T++ G+ F + + +P N V + + Sbjct: 9 GMVLKVMPIGDYDRRITLLTKERGKITAFAKGAR----RP-----NSALVA--AATPFSF 57 Query: 67 GEFRFEVLESHCAK----------LLSSSLFLYGLQSIVPLFRFLP--------EREPCL 108 GEF E+ E + L F ERE Sbjct: 58 GEF--EMFEGRSSYTVVRASIQNYFREVQEELEATYYGCYFLEFADYYCQENNDEREMLK 115 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 LY L + ++ I EL + G ++ CV G ++L W + G Sbjct: 116 LLYQSLRALTSAAYDKRLVRFI---FELKAMAVNGEAPNVFSCVRCGEKENLRWFVTRRG 172 Query: 169 GAVCRSVGLPYAEKMLVLPS----FLWKEEQTIDADSLKSAFQ 207 G +C + +K P FL +E + SA Sbjct: 173 GCICETC-----KKKDPSPEESGRFLLEESTLYTMQYIISARV 210 >gi|270291316|ref|ZP_06197538.1| DNA repair protein RecO [Pediococcus acidilactici 7_4] gi|304385066|ref|ZP_07367412.1| recombination protein O [Pediococcus acidilactici DSM 20284] gi|270280162|gb|EFA25998.1| DNA repair protein RecO [Pediococcus acidilactici 7_4] gi|304329260|gb|EFL96480.1| recombination protein O [Pediococcus acidilactici DSM 20284] Length = 253 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 67/171 (39%), Gaps = 6/171 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 +++ +++ E +++++ +TR+YG+ + F++N + +++ + R + R + Sbjct: 11 GMVMFAKNHRENDLLVKFLTREYGKRMFFIKNAKKKDFKLRSAILPFTHGRYSGLIR-SN 69 Query: 65 NLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L + + L Y + + + +D L L Sbjct: 70 GLSYINAALDVKQFENIFQDIELNAYATFLLNLVDAAFDDNFKIEAWFDRLARALTLIDA 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCR 173 + I I++ LL + G + CVV G L + S GG +C+ Sbjct: 130 GNDAEVITDLIQIQLLNSFGIAIVWDHCVVCGRRDLALDY-SESRGGMLCQ 179 >gi|91794115|ref|YP_563766.1| DNA repair protein RecO [Shewanella denitrificans OS217] gi|91716117|gb|ABE56043.1| DNA repair protein RecO [Shewanella denitrificans OS217] Length = 240 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 4/140 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLA-Q 64 A +L R + E ++IL ++ GR R G R ++ I+Q + V + ++ + Sbjct: 4 AYVLHHRPFRESSVILNMLVDGIGRVDAITRLGSGKRSIKSIVQPFQPLLVQFNNQSEHK 63 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + G + LE+ + + LY G L R L L+ + L Sbjct: 64 SQGLRNIKQLEAAAPAMPLAGDSLYSGFYLNELLVRLLSVEHQGESLFVEYHRALVAL-A 122 Query: 124 PSVIGKIFVQIELMLLKNIG 143 EL LLK +G Sbjct: 123 GEFNAASLRYFELALLKELG 142 >gi|238924232|ref|YP_002937748.1| DNA repair and genetic recombination protein [Eubacterium rectale ATCC 33656] gi|238875907|gb|ACR75614.1| DNA repair and genetic recombination protein [Eubacterium rectale ATCC 33656] gi|291529104|emb|CBK94690.1| DNA replication and repair protein RecO [Eubacterium rectale M104/1] Length = 242 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 12/183 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG-NLVRV----NWRSR 61 ++L G+ + + ++T++ G+ F R R L AG N + + Sbjct: 9 GMVLSAMPVGDFDKRITILTKERGKITAFARGA--RRPNSQLMAGSNPFSFGEFELFEGK 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 A +L + + ++ +L +Y G + F E ++ +L L Sbjct: 67 SAYSLSKVT---ISNYFRELTQDLEAVYTGFYFLEFCGYFCQENNDEKDMLKLLYQSLRA 123 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + P+ ++ EL + G G L C+ + L S + GG C + G Sbjct: 124 LESPAYKNELVRAVFELKAITINGEGPSLFSCIHCHSREGLNVFSARRGGVFCDNCGTQV 183 Query: 180 AEK 182 + Sbjct: 184 QGR 186 >gi|256847127|ref|ZP_05552573.1| DNA repair protein RecO [Lactobacillus coleohominis 101-4-CHN] gi|256715791|gb|EEU30766.1| DNA repair protein RecO [Lactobacillus coleohominis 101-4-CHN] Length = 259 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 12/184 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQA---GNLVRVNWRSR 61 II+ R Y E++ +++++T + G + VR + +M + G V R Sbjct: 10 GIIMNRRDYRERDQLVKILTDKQGPSMFLVRGARRKNFKMAADILPFTHGRYVSWLSSDR 69 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS--IVPLFRFLPEREPCLELYDMLNIFLN 119 L + E+H + + + + + + R + Y + L+ Sbjct: 70 L-----NYIVAAQETHQFRNIGDDITANAYATFILELVDRAFEDGHDIGAWYGQILAALH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I +E+ LL G + CV+ G Q L+ S GG +C + Sbjct: 125 LINDGQDPQVIANVLEVQLLGRFGVMPEWRHCVICGQNQKLMDYSEAYGGLLCVNHWDHD 184 Query: 180 AEKM 183 ++ Sbjct: 185 PHRL 188 >gi|227495960|ref|ZP_03926271.1| Recombinational DNA repair protein (RecF pathway) [Actinomyces urogenitalis DSM 15434] gi|226834514|gb|EEH66897.1| Recombinational DNA repair protein (RecF pathway) [Actinomyces urogenitalis DSM 15434] Length = 161 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 55/149 (36%), Gaps = 15/149 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR +G+ + + R L+ ++V V + Sbjct: 6 YRDEAIVLRTYRLGEADRIIVMLTRAHGQVRAVAKGVRKTGSRFGARLEPFSMVDVQLHA 65 Query: 61 -RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE--------PCLE-- 109 R + E +E A + S ++V L E + P Sbjct: 66 GRSLD--VVTQVETIEPFSAPVCSDYAVFTCASTMVETAERLTEDDGDLGTTDSPQQFLL 123 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELML 138 LY L P ++ ++ L L Sbjct: 124 LYGALAAMARRRHAPGLVLDSYLLRALAL 152 >gi|315038511|ref|YP_004032079.1| DNA repair protein recO [Lactobacillus amylovorus GRL 1112] gi|325956927|ref|YP_004292339.1| DNA repair protein recO [Lactobacillus acidophilus 30SC] gi|312276644|gb|ADQ59284.1| DNA repair protein recO [Lactobacillus amylovorus GRL 1112] gi|325333492|gb|ADZ07400.1| DNA repair protein recO [Lactobacillus acidophilus 30SC] gi|327183707|gb|AEA32154.1| DNA repair protein recO [Lactobacillus amylovorus GRL 1118] Length = 250 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 8/172 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQ--AGNLVRVNWRS 60 II + Y E +++ ++MT+Q G V+ +S L G V Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIITLIVKGALRPKSRLSAATLNFSMGTYVIYT-SG 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 NL ++ ++ + Y + E +P + YD+ L Sbjct: 68 HGLSNLRTYK--EVKQFDGLYQDLTKNAYASFIFDLIDHAFVEYQPIGKYYDLALFALKK 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 I +++ +L G +L CV+ G + + S K GG +C Sbjct: 126 INEGVDCEMITQIVQMKMLSAYGVEPELRHCVICGKEKGIFDYSIKLGGVIC 177 >gi|153853790|ref|ZP_01995146.1| hypothetical protein DORLON_01137 [Dorea longicatena DSM 13814] gi|149753540|gb|EDM63471.1| hypothetical protein DORLON_01137 [Dorea longicatena DSM 13814] Length = 239 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 20/195 (10%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WRSRLAQ 64 +IL GE + + ++TR+ G+ F R + + + + + + R + Sbjct: 1 MILTAAPIGEYDRRVVILTRERGKISAFARGARRPNSALMGVTSPFSFGEFTVYEGRTSY 60 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE------LYDMLNIFL 118 L ++ +L + Y + L + RE E LY L Sbjct: 61 TLVSASV---SNYFQELRTDVEGAYYGFYFMDLAGYYA-REANDETEMLKLLYQTLRALT 116 Query: 119 NCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 N H I ++ EL + G G + +C++ G + S + GG +C Sbjct: 117 NIH-----IPNELIRCIYELKTITVNGEGPQVMECIMCGDKEREKVFSIRRGGVICTQCA 171 Query: 177 LPYAEKMLVLPSFLW 191 ++ + +LPS L+ Sbjct: 172 GHISDGIRLLPSTLY 186 >gi|304438433|ref|ZP_07398373.1| recombination protein O [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368516|gb|EFM22201.1| recombination protein O [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 243 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 17/183 (9%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 + I+LG RS+GE + ++ + T+++G R + L AG + + L Sbjct: 6 AEGIVLGTRSWGEADKVVTLYTKEHGLVRAAAFG--CRRPRSPL-AGAMQLFV-HADLQL 61 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQ------SIVPLFRFLPEREPCLELYDMLNIFL 118 G R E +++ + + + + F+PE +D L + Sbjct: 62 AEGT-RLETVKTASVRASHHRIADDLAALAYATFTAEVVCAFMPEGVEDETFFDALAQIM 120 Query: 119 NCHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSV 175 + P V V L L G C+ G GGA+C Sbjct: 121 TAFETRQPRVTALAAV---LRTLDAAGLQQTYDHCLHCGTKISGDAVFHAAEGGALCADC 177 Query: 176 GLP 178 Sbjct: 178 AGE 180 >gi|299142180|ref|ZP_07035313.1| DNA repair protein RecO [Prevotella oris C735] gi|298576269|gb|EFI48142.1| DNA repair protein RecO [Prevotella oris C735] Length = 240 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 19/193 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +GE ++++++T Q GR R S R + Q ++ V Sbjct: 1 MVIKTKAIVLHAFKFGENKMMIDLLTEQQGRVTFAARISNSPRAKVKKQYFQPFAVLDVE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R + F + + S L + + R+ + N Sbjct: 61 YDYRQKATIQTFIHVGIAYPLGSIPFDSYKLS-ISFFLAELTAYATRDEQTNAP-LFNYI 118 Query: 118 LNCHKIPSVIGKIFVQIELM----LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 ++ + G F L+ LL+ +GF +L ++ + +SG C Sbjct: 119 VSSIEWLDSCGTTFSNFHLVYIVHLLRFLGFYPNLEA------YEEGCYFDMRSG---CY 169 Query: 174 SVGLP-YAEKMLV 185 S +P + + + Sbjct: 170 SCTMPTHRDFLAP 182 >gi|281424994|ref|ZP_06255907.1| DNA repair protein RecO [Prevotella oris F0302] gi|281400838|gb|EFB31669.1| DNA repair protein RecO [Prevotella oris F0302] Length = 240 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 19/193 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +GE ++++++T Q GR R S R + Q ++ V Sbjct: 1 MVIKTKAIVLHAFKFGENKMMIDLLTEQQGRVTFAARISNSPRAKVKKQYFQPFAVLDVE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R + F + + S L + + R+ + N Sbjct: 61 YDYRQKATIQTFIHVGIAYPLGSIPFDSYKLS-ISFFLAELTAYATRDEQTNAP-LFNYI 118 Query: 118 LNCHKIPSVIGKIFVQIELM----LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 ++ + G F L+ LL+ +GF +L ++ + +SG C Sbjct: 119 VSSIEWLDSCGTTFSNFHLVYIVHLLRFLGFYPNLEA------YEEGCYFDMRSG---CY 169 Query: 174 SVGLP-YAEKMLV 185 S +P + + + Sbjct: 170 SCTMPTHRDFLAP 182 >gi|312898792|ref|ZP_07758180.1| DNA repair protein RecO [Megasphaera micronuciformis F0359] gi|310619954|gb|EFQ03526.1| DNA repair protein RecO [Megasphaera micronuciformis F0359] Length = 245 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 13/151 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 D IIL V+ + ++ V T Q GR F G R P Q + +R Sbjct: 15 DGIILNVQKHPSGTRLITVFTLQAGRVRVFASGGGRKRKNGNPFFQ-FARIAFE--ARRK 71 Query: 64 QN---LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 N +GE+ E + L + + Y + PE E E+Y +L + Sbjct: 72 DNTYTMGEY--ECRNAKALMNLDWNTYAYTQILAEIVTSLFPEGERDEEVYQLLKAYAET 129 Query: 121 HKIPSVI-GKIFVQIELMLLKNIGFGLDLTK 150 V I L+ + GF D+ + Sbjct: 130 IDYKDVRTATIIAGW--QLIASAGFFPDIDR 158 >gi|288925539|ref|ZP_06419472.1| DNA repair protein RecO [Prevotella buccae D17] gi|288337755|gb|EFC76108.1| DNA repair protein RecO [Prevotella buccae D17] Length = 241 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 17/160 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L GE I++++T + GR R S + + Q L+ + Sbjct: 1 MLVKTKAIVLHSIKLGESKTIVDMLTERQGRVSFVCRIASSGKAKIKKQFFQPLTLLELE 60 Query: 58 W---RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL----PEREPCLEL 110 + R +++G+ R + + L + L FL E + L Sbjct: 61 YDSRSGRTLRHIGDIRI------LTPFRTLPFDAFKLSIALFLAEFLYYSTREEQENEPL 114 Query: 111 YDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + + + F + + L + IGF +L Sbjct: 115 FAYVENSILWLDGAERAYANFHLVFMMRLSRFIGFFPNLD 154 >gi|167759229|ref|ZP_02431356.1| hypothetical protein CLOSCI_01576 [Clostridium scindens ATCC 35704] gi|167663103|gb|EDS07233.1| hypothetical protein CLOSCI_01576 [Clostridium scindens ATCC 35704] Length = 247 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 64/185 (34%), Gaps = 14/185 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRV-NWRSRLA 63 ++L GE + + ++T++ G+ F R + + + + + R + Sbjct: 8 GMVLKASPIGEYDRRVVILTKERGKITAFARGARRPNSSLVGVTSPFTFGEFMVYEGRTS 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLF----RFLPEREPCLELYDMLNIFL 118 L ++ ++L YG + + E +P LY L Sbjct: 68 FTLVSASV---TNYFSELRIDVEGAYYGFYFLEFADYYAREYNDETQPLKLLYQTLRALT 124 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N H ++ I+ EL + G + KC+ G + S + GG VC + Sbjct: 125 NPHLDNRLVRYIY---ELKAVAINGEAPQVFKCICCGDRERPALFSVRKGGLVCSACSGR 181 Query: 179 YAEKM 183 + M Sbjct: 182 ITDGM 186 >gi|119358324|ref|YP_912968.1| DNA repair protein RecO [Chlorobium phaeobacteroides DSM 266] gi|229485532|sp|A1BJG7|RECO_CHLPD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119355673|gb|ABL66544.1| DNA replication and repair protein RecO [Chlorobium phaeobacteroides DSM 266] Length = 261 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 68/178 (38%), Gaps = 23/178 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + AI+L Y +++ I + TR++G ++ G+ ++ AG ++ + Sbjct: 1 MIVKTRAIVLREIRYRDQSKICSLFTREFGLLSVIIKGGRNPKSKLAGRFIAGTVLDIVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSL-------FLYGLQSIVPLF-RFLPEREPCLEL 110 + E+ LL S + + I+ L + + +E + L Sbjct: 61 YKKT-------TREIQLVSEGNLLFSPMVPQPDIERYAIMYRIIDLVSQSIDGQEKNIPL 113 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQI-ELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 + ++ L S ++ L L+ +GF + +CV++ +SP + Sbjct: 114 FSLIASVLEELYSTSDRFRLLYSWFLLKLVSLLGFEPSIHRCVLSHEE-----ISPAT 166 >gi|254819382|ref|ZP_05224383.1| DNA repair protein RecO [Mycobacterium intracellulare ATCC 13950] Length = 265 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 6/155 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR +G + + R + L+ + Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + +++ ++S +++ L ER P L+ + L Sbjct: 64 GRNLDIVT-QVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPALHGLTVSAL 122 Query: 119 NCHKIP-SVIGKIFVQIELMLLKNIGFGLDLTKCV 152 G + L + G+ L +C Sbjct: 123 RAVADGRRSRGLLLDAYLLRAMGIAGWAPALNECA 157 >gi|313903266|ref|ZP_07836658.1| DNA repair protein RecO [Thermaerobacter subterraneus DSM 13965] gi|313466354|gb|EFR61876.1| DNA repair protein RecO [Thermaerobacter subterraneus DSM 13965] Length = 288 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 54/161 (33%), Gaps = 9/161 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRV-NWR 59 + + I+L R YGE++ ++ ++ R R + + R + +Q R W+ Sbjct: 4 YSVEGIVLRTREYGERDRLVTLVDRDGTRRTVLAKGVRRPRSSLAAGVQPYTYSRFLLWK 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R G + +VL++H S F E P ++ +L L Sbjct: 64 GRSLD--GVSQVQVLDAHAGLRGSLEALAAAAYVAELAEAFTHEGAPSPGVFPVLLAVLR 121 Query: 120 CHKIPSVIGKIFVQI----ELMLLKNIGFGLDLTKCVVTGV 156 EL LL G G+ L C G Sbjct: 122 GLAAAPADRVAQGLWLRHAELRLLDLAGLGIQLEACQDCGR 162 >gi|257784593|ref|YP_003179810.1| DNA repair protein RecO [Atopobium parvulum DSM 20469] gi|257473100|gb|ACV51219.1| DNA repair protein RecO [Atopobium parvulum DSM 20469] Length = 249 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 17/184 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-RSRLA 63 AI+L E+++IL +++ + + R ++ + V R Sbjct: 11 AIVLDRTKLAEQDLILTMLSDTGEERRAVAKGARKPGGRFAARVELFCELDVLLAEGRSL 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL---- 118 L E +LE H A L + +I + RF + L+ +L+ L Sbjct: 71 DILSEAT--LLEPH-ATLRGDLSKVAAASAICEVARFSCIDGVEDAFLFSLLSRALKACE 127 Query: 119 --NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + K ++ +V +L + G+ +L C+ G + L + SP +GGA+C S Sbjct: 128 EVDDEKHLDLVVAAYV---FKVLAHEGWRPELASCIACGD-EALTYFSPTAGGALCGSCA 183 Query: 177 LPYA 180 Sbjct: 184 HEIE 187 >gi|93005199|ref|YP_579636.1| recombination protein O, RecO [Psychrobacter cryohalolentis K5] gi|92392877|gb|ABE74152.1| DNA replication and repair protein RecO [Psychrobacter cryohalolentis K5] Length = 254 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 24/160 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLAQ 64 +L R Y EK + + ++Q+G G + P+ + + + Sbjct: 8 GYLLHQRPYQEKRALYYLFSQQHGVIHGI-----GKKGAPLFMP-LQLFATGKRDLKTFS 61 Query: 65 NLGEFRFEVLESHCAKL-------------LSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 + F + + + ++ L L+R LP +P L+ Sbjct: 62 QINIASFSSVHTQAVQDDNAANVDIRHQESITGQHQYAALYLNEILWRLLPTEDPMPILW 121 Query: 112 DMLNIFLNCHKIPSVIGKI---FVQIELMLLKNIGFGLDL 148 L+ K P ++ Q E L +GF L L Sbjct: 122 QHYQNSLDALKKPLTADELRLCLRQFESYLFNELGFSLTL 161 >gi|322509027|gb|ADX04481.1| recO [Acinetobacter baumannii 1656-2] gi|323519009|gb|ADX93390.1| recombinational DNA repair protein (RecF pathway) [Acinetobacter baumannii TCDC-AB0715] Length = 227 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 17/148 (11%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 1 MIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN---F 52 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLNCHK 122 + E+L + + L IV R P E + ++ + L+ H+ Sbjct: 53 TKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLSSHE 110 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 P + + ++ E +LL +G+ +D + Sbjct: 111 NPDLFLRQILRQFEHILLAELGYAIDFS 138 >gi|126658910|ref|ZP_01730053.1| DNA repair protein RecO [Cyanothece sp. CCY0110] gi|126619860|gb|EAZ90586.1| DNA repair protein RecO [Cyanothece sp. CCY0110] Length = 279 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 12/160 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 +Q IIL + E + ++ +++ +YG V + + + L N + + Sbjct: 6 YQATGIILKGMPFQEADRLVTLLSPEYGLIRAIVPGARKQKSKLRGRCELFVINELLIA- 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 + R + + E LES+ L L Q + L L + +P LELY++LN Sbjct: 65 KGRSLDKI--TQAETLESYPG-LSKDLGKLAAAQYLAELVLNLALDEQPQLELYELLNEH 121 Query: 118 LNCHKIPSVIGKIFVQIELM---LLKNIGFGLDLTKCVVT 154 L + S+ ++ + LL G G + C +T Sbjct: 122 LRRLERMSLAESLYGYLAQAVFHLLAIAGIGPQVHYCCIT 161 >gi|310828429|ref|YP_003960786.1| DNA repair protein RecO [Eubacterium limosum KIST612] gi|308740163|gb|ADO37823.1| DNA repair protein RecO [Eubacterium limosum KIST612] Length = 248 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 65/195 (33%), Gaps = 27/195 (13%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV-----NWRSR 61 I++ + + E++ I+ + T + G+ + R + L A + + + Sbjct: 8 GIVIREQPFQEQDKIITLFTEEEGKIKAIAKGV--RRNRSPLVAATQLFAYSEFVYYPGK 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC- 120 N+ + +++S L + + + ++ L + + Y L Sbjct: 66 NFANINQAS--LIQS-FYPLRNDLMKMSLASYVLELL------DAFYDYYQGNKAVLRLV 116 Query: 121 --------HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + ++L L + G C + G T+ L S ++ G +C Sbjct: 117 NFILFYLSEDKSQSNEALVAALQLKLTEVHGIRPVFDTCALCGSTEHLTHFSIENNGVLC 176 Query: 173 RSV--GLPYAEKMLV 185 + Y+ ++ Sbjct: 177 ENCHRTEGYSYRLTP 191 >gi|309811037|ref|ZP_07704835.1| DNA repair protein RecO [Dermacoccus sp. Ellin185] gi|308435001|gb|EFP58835.1| DNA repair protein RecO [Dermacoccus sp. Ellin185] Length = 269 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVR 55 ++D AI+L GE + I+ ++TR G+ + + + + L+ G +V Sbjct: 5 YRDAAIVLRTHKLGEADRIITMLTRNRGKKRAVAKGVRKTKSKFGARLEPGMVVD 59 >gi|153953551|ref|YP_001394316.1| DNA repair protein RecO [Clostridium kluyveri DSM 555] gi|219854173|ref|YP_002471295.1| hypothetical protein CKR_0830 [Clostridium kluyveri NBRC 12016] gi|189039652|sp|A5N6N7|RECO_CLOK5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790517|sp|B9E056|RECO_CLOK1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146346432|gb|EDK32968.1| RecO [Clostridium kluyveri DSM 555] gi|219567897|dbj|BAH05881.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 257 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 12/159 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI----LQ--AGNLVRV 56 ++ AII+ + E + ++ + T + G+ + + R P+ LQ G+ V Sbjct: 9 FKTRAIIIKTQDIKESDKLVWLFTEKLGKISTIAKGSKKSRS-PLFSTTLQFCYGDYVVY 67 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 +S N +++S L + Y + + E EL+ L Sbjct: 68 KGKSLYVINESS----LIDSFQHLLNDLNDLTYASYFCELTDIAMDDGESSRELFRYLAT 123 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVT 154 + +V + + EL +LK G+GL+ C + Sbjct: 124 SFYLIRSHAVDIETLARTFELKILKTTGYGLNFDYCALC 162 >gi|239917730|ref|YP_002957288.1| DNA replication and repair protein RecO [Micrococcus luteus NCTC 2665] gi|281413776|ref|ZP_06245518.1| DNA replication and repair protein RecO [Micrococcus luteus NCTC 2665] gi|239838937|gb|ACS30734.1| DNA replication and repair protein RecO [Micrococcus luteus NCTC 2665] Length = 273 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 61/185 (32%), Gaps = 13/185 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++ +AI+L GE + I+E +T + G + + S R+ +++ + R Sbjct: 21 FRTEAIVLRTHRLGEADRIVEALTPEQGLVRAVAKGVRKTSSRLGSVVEPFMHSTLQLAR 80 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP------EREPCLELYDM 113 R + + ++L + L + ++ +P R + Sbjct: 81 GRGELHTVS-QAQLLHPYATMLAADYDAYTVAGALAEAVERVPAVDDGGRRAQYRLFHGA 139 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L P +I F+ L L G+ +C G + GG VC Sbjct: 140 LAALARGAHDPRLILHSFL---LRALAQAGWAPTFDRCARCGAPGPHTALHVGLGGDVCP 196 Query: 174 SVGLP 178 P Sbjct: 197 ECRPP 201 >gi|325105246|ref|YP_004274900.1| DNA repair protein RecO [Pedobacter saltans DSM 12145] gi|324974094|gb|ADY53078.1| DNA repair protein RecO [Pedobacter saltans DSM 12145] Length = 241 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 69/184 (37%), Gaps = 21/184 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L V Y E ++++++ T ++G + + + + +LQA +L+ + Sbjct: 1 MLHKTRGIVLKVTDYSESSVVVKIFTEKFGVQSYLINGVKKPKAKVKMNMLQALHLLDM- 59 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSS-----SLFLYGLQSIVPLFRFLPEREPCLELY 111 + + +V + + +LSS S + +++ + E+ L+ Sbjct: 60 ----VVYHKPMATMHKVSDVRSSPILSSIPYDISKSAIAMFLNEVIYKSIKEQVDDALLF 115 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 + ++ + F + + L + +GF DL+ + K G Sbjct: 116 EFISTSIELLDQEDGSVANFHLVFLMKLTRFLGFHPDLS------FADTSSYFDLKEGAF 169 Query: 171 VCRS 174 V Sbjct: 170 VSSE 173 >gi|296166314|ref|ZP_06848751.1| recombination protein O [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898323|gb|EFG77892.1| recombination protein O [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 267 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR +G + + R + L+ + Sbjct: 6 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHP 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + +++ ++S +++ L ER P L+ + L Sbjct: 66 GRNLDIVT-QVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPALHRLTVSAL 124 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCV 152 + + + LL+ +G LT+C Sbjct: 125 RAVADGRRSRDLLL--DAYLLRAMGIAGWAPALTECA 159 >gi|167950039|ref|ZP_02537113.1| DNA repair protein RecO [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 137 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%) Query: 90 GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 G L R L +P +L+ + L + + EL LL +G+GL L Sbjct: 5 GFYLNELLTRLLQREDPHPQLFLHYSNTLAALATAEPMEAVLRHFELELLDELGYGLLLD 64 Query: 150 KCVVTG 155 + G Sbjct: 65 QEADNG 70 >gi|116492865|ref|YP_804600.1| DNA replication and repair protein RecO [Pediococcus pentosaceus ATCC 25745] gi|122265671|sp|Q03F64|RECO_PEDPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116103015|gb|ABJ68158.1| DNA replication and repair protein RecO [Pediococcus pentosaceus ATCC 25745] Length = 253 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 71/179 (39%), Gaps = 4/179 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 I++ RS+ E +++++ +T+++G+ + F+RN + +++ + + + R + Sbjct: 11 GIVMFERSHRENDLLVKFLTKEHGKRMFFIRNAKKVDFKLRSAILPFSHGQYTGLIR-SN 69 Query: 65 NLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L + + +L Y + + + ++ +N L Sbjct: 70 GLSYINAALDVQQFENIFQDITLNAYATFVLNLVDAAFDDNVKITSWFERINRALILIDA 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + I I++ LL + G + CV+ G T L S GG +C+S + Sbjct: 130 GNDAEIITDLIQIQLLNSFGISITWDHCVICGRTDLPLDYSEAFGGMLCQSHWERDEHR 188 >gi|325662227|ref|ZP_08150842.1| DNA repair protein RecO [Lachnospiraceae bacterium 4_1_37FAA] gi|331086021|ref|ZP_08335104.1| DNA repair protein RecO [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471479|gb|EGC74700.1| DNA repair protein RecO [Lachnospiraceae bacterium 4_1_37FAA] gi|330406944|gb|EGG86449.1| DNA repair protein RecO [Lachnospiraceae bacterium 9_1_43BFAA] Length = 248 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 68/181 (37%), Gaps = 10/181 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WRSRLA 63 +IL G+ + + ++T++ G+ F R + + + + + + + + Sbjct: 9 GMILSAAPVGDYDKRVVILTKERGKISAFARGARRPNSSLVGVTTPFAFGEMTLYEGKSS 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 NL + + ++ ++L + YG + + E E+ +L L Sbjct: 69 YNLVQAD---ISNYFSELRTDMEGAYYGFYFMEFADYYTKENNDEREMLKLLYQSLRALV 125 Query: 123 IPSVIGKI--FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ ++ ++ EL + G ++ CV G T++L S G +C Sbjct: 126 RKTIPYELIRYI-FELKSISINGEAPEVFACVSCGSTEELEVFSESGQGMLCSECCHEVK 184 Query: 181 E 181 + Sbjct: 185 D 185 >gi|295693062|ref|YP_003601672.1| DNA repair protein reco [Lactobacillus crispatus ST1] gi|295031168|emb|CBL50647.1| DNA repair protein recO [Lactobacillus crispatus ST1] Length = 251 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 12/190 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQ--AGNLVRVNWRS 60 II + Y E +++ ++MT+Q G V+ +S L G V Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIMTLIVKGALKPKSRLSAATLNFSIGTYVIYT-SG 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV--PLFRFLPEREPCLELYDMLNIFL 118 + NL ++ E+ L + L S + + E +P + YD+ L Sbjct: 68 KGLSNLRTYK----EARQFDGLYNDLTKNAYISFIFDLIDHAFVEYQPIGKYYDLALFAL 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I +++ +L G L CV+ G + + S K GG +C Sbjct: 124 KKIDSGVDAEMITQIVQMKILAAYGVEPQLKHCVICGKEKGVFDYSIKMGGVICSDHFST 183 Query: 179 YAEKMLVLPS 188 +M + P Sbjct: 184 VTSRMHLKPK 193 >gi|291535365|emb|CBL08477.1| DNA replication and repair protein RecO [Roseburia intestinalis M50/1] Length = 254 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 72/223 (32%), Gaps = 43/223 (19%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L V G+ + + ++T++ G+ F + + +P N V + + Sbjct: 9 GMVLKVMPIGDYDRRITLLTKERGKITAFAKGAR----RP-----NSALVA--AATPFSF 57 Query: 67 GEFRFEVLESHCAK----------LLSSSLFLYGLQSIVPLFRFLP--------EREPCL 108 GEF E+ E + L F ERE Sbjct: 58 GEF--EMFEGRSSYTVVRASIQNYFREVQEELEATYYGCYFLEFADYYCQENNDEREMLK 115 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 LY L + ++ I EL + G ++ CV G ++L W + G Sbjct: 116 LLYQSLRALTSAAYDKRLVRFI---FELKAMAVNGEAPNVFSCVRCGEKENLRWFMTRRG 172 Query: 169 GAVCRSVGLPYAEKMLVLPS----FLWKEEQTIDADSLKSAFQ 207 G +C + EK P FL +E + SA Sbjct: 173 GCICETC-----EKKDPSPEESGRFLLEESTLYTMQYIISARV 210 >gi|312869095|ref|ZP_07729269.1| DNA repair protein RecO [Lactobacillus oris PB013-T2-3] gi|311095341|gb|EFQ53611.1| DNA repair protein RecO [Lactobacillus oris PB013-T2-3] Length = 261 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 6/170 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 II+ R Y E++++++++T + G + +VR+ + R+ + ++ L Sbjct: 10 GIIIYRRDYRERDLLIKILTDRIGPAMFYVRDAKKRGFRLASDILP--FTHGSYIGSLDD 67 Query: 65 NLGEF--RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + F + S Y + + + +P +D + L Sbjct: 68 HGLSFINTASETHQYQHIAGDLSRNAYATYILALVDHAFTDGQPLGGWFDQVAAALALID 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + IE LL G +CV+ G L S + GG +C Sbjct: 128 RGQDEQVVTNVIETQLLTVFGVAPTWDRCVICGRADRPLDFSEQYGGMLC 177 >gi|146298469|ref|YP_001193060.1| DNA repair protein RecO [Flavobacterium johnsoniae UW101] gi|254790554|sp|A5FM31|RECO_FLAJ1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146152887|gb|ABQ03741.1| DNA repair protein RecO [Flavobacterium johnsoniae UW101] Length = 237 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 22/178 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M + AI++ + EK++I++ T G FVR+ S R Q +++ + Sbjct: 1 MQIKTKAIVISSLKFQEKSLIVKCFTLSNGLKSYFVRDAFSSRKASQKIAYFQPLSILEI 60 Query: 57 NWRSRLAQNLGEFRFEVLES--HCAKLLSSSLFLYGLQSIVPLFRFLP----EREPCLEL 110 A + + E + + ++ ++ L L E E L Sbjct: 61 E-----AVHKNKGTLENFKEIKTAVPFQTIHTDIFKSTIVMFLSEMLHYSIQEEEKNEPL 115 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 + L L I + + L + K +GF D+++ DL + K G Sbjct: 116 FVFLETALTWLDHHDDISNFHLILLLEITKYLGFYPDVSEI-------DLPYFEMKEG 166 >gi|300853997|ref|YP_003778981.1| putative DNA repair protein [Clostridium ljungdahlii DSM 13528] gi|300434112|gb|ADK13879.1| predicted DNA repair protein [Clostridium ljungdahlii DSM 13528] Length = 257 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 14/160 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQ--AGNLVRVN 57 ++ A+I+ + E + ++ + T + G+ R +S + LQ G+ V Sbjct: 9 FKTRAVIIKTQDIKESDKLVWLFTEKLGKIATIARGSKSSKNSLFSTTLQFCYGDYVVYK 68 Query: 58 WRSRLAQNLGEFRFE--VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + NL E +++S L + Y + + E EL+ L Sbjct: 69 GK-----NL-YVINESSLIDSFQDLLNDLNDLTYASYFCELTDIAMNDGETSSELFRYLV 122 Query: 116 IFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVT 154 + V + + EL +L+ G+GL+ C + Sbjct: 123 TCFYLIRSHGVDVETLARAFELKILQITGYGLNFDHCALC 162 >gi|466972|gb|AAA17158.1| B1937_F1_25 [Mycobacterium leprae] Length = 269 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L + GE + I+ ++TR +G + + R + L+ + Sbjct: 5 YRDWALVLRQHNLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAYIDAQLHP 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + +++ ++S +++ L ER P L+ + L Sbjct: 65 GRNLDIVT-QVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPTLHRLTVSAL 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCV 152 + + + ++ LL+ +G LT C Sbjct: 124 RAVADGN-RPRDLL-LDAYLLRAMGIAGWAPALTACA 158 >gi|163750602|ref|ZP_02157839.1| DNA repair protein RecO [Shewanella benthica KT99] gi|161329597|gb|EDQ00588.1| DNA repair protein RecO [Shewanella benthica KT99] Length = 230 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 7/146 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLA 63 + +L R + + ++++ ++ +GR R G ++ ILQ + R + Sbjct: 2 ERGYVLHTRPFKDSSVLVNMLIDGHGRVDCVARLGSGKTSIKSILQPFQPLIFQLSGRTS 61 Query: 64 -QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +N+ A LS + G L R + L+ + L Sbjct: 62 LRNMSSLEA----GSPAIPLSGDVSFAGFYLNELLVRCIAVDHGAESLFFTYHKTLMSMA 117 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 EL LLK +G L Sbjct: 118 A-GFCESQLRYFELSLLKELGLMPTL 142 >gi|15827261|ref|NP_301524.1| DNA repair protein RecO [Mycobacterium leprae TN] gi|221229739|ref|YP_002503155.1| DNA repair protein RecO [Mycobacterium leprae Br4923] gi|20139698|sp|Q9CCN0|RECO_MYCLE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764647|sp|B8ZUT3|RECO_MYCLB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13092810|emb|CAC30141.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932846|emb|CAR70726.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 268 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L + GE + I+ ++TR +G + + R + L+ + Sbjct: 4 YRDWALVLRQHNLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAYIDAQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + +++ ++S +++ L ER P L+ + L Sbjct: 64 GRNLDIVT-QVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPTLHRLTVSAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCV 152 + + + ++ LL+ +G LT C Sbjct: 123 RAVADGN-RPRDLL-LDAYLLRAMGIAGWAPALTACA 157 >gi|77411229|ref|ZP_00787580.1| DNA repair protein RecO [Streptococcus agalactiae CJB111] gi|77162752|gb|EAO73712.1| DNA repair protein RecO [Streptococcus agalactiae CJB111] Length = 243 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 20/202 (9%) Query: 13 RSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR------SRLAQNL 66 R+Y E + ++++ T G+ + FV++ + +LQ + + S + Sbjct: 4 RNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDDYK 63 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 F+ + S L I L + + +L+ L L + Sbjct: 64 EVLAFQEINS-------DLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGL 116 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK--- 182 + E+ LL+ G L+ CV S K G +C + Y ++ Sbjct: 117 DYEILTNIFEVQLLERFGVALNFHDCVFCHRAGLPFDFSHKYSGLLCPN--HYYKDERRN 174 Query: 183 -MLVLPSFLWKEEQTIDADSLK 203 + +L Q+I D L+ Sbjct: 175 HLDPNMLYLINRFQSIQFDDLQ 196 >gi|329946922|ref|ZP_08294334.1| DNA repair protein RecO [Actinomyces sp. oral taxon 170 str. F0386] gi|328526733|gb|EGF53746.1| DNA repair protein RecO [Actinomyces sp. oral taxon 170 str. F0386] Length = 249 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR +G+ + + S R L+ ++V V + Sbjct: 6 YRDEAIVLRTYKLGEADRIIVMLTRHHGQVRAVAKGVRRTSSRFGARLEPFSMVDVQLHA 65 >gi|238060552|ref|ZP_04605261.1| hypothetical protein MCAG_01518 [Micromonospora sp. ATCC 39149] gi|237882363|gb|EEP71191.1| hypothetical protein MCAG_01518 [Micromonospora sp. ATCC 39149] Length = 68 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRV 56 ++DDA++L V+ GE + I+ ++TR++GR R + + + L+ V V Sbjct: 9 YRDDAVVLRVQKLGESDRIITLLTRRHGRLRAVARGVRRTTSKFGARLEPFGHVDV 64 >gi|259046830|ref|ZP_05737231.1| DNA repair protein RecO [Granulicatella adiacens ATCC 49175] gi|259036453|gb|EEW37708.1| DNA repair protein RecO [Granulicatella adiacens ATCC 49175] Length = 260 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 75/187 (40%), Gaps = 12/187 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 D I++ ++Y EK+++++++TR +G+ + F+RN Q +H + Q Sbjct: 8 DGIVIMRQTYREKDMLVKILTRDHGKLMFFLRNAQQSNHPLTAATQVFTRATFLG----H 63 Query: 64 QNLGEFRFEVLESH----CAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFL 118 + F F + +SH +L L + L + + ++ +L + Sbjct: 64 IHQNGFSF-LKDSHDIKPATIVLQDVKAQAVLAYLTQLTDAVMDDHIVNKTVFQLLWDSI 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I E+ +L+ G ++ CV+ DL+ S + G +C++ Sbjct: 123 EAINNGIDAEVILRFFEIKILRYFGVEVEWQHCVICNRDTDLVDFSIQKHGCLCKNHLDE 182 Query: 179 YAEKMLV 185 +M + Sbjct: 183 DEYRMQL 189 >gi|77405230|ref|ZP_00782327.1| DNA repair protein RecO [Streptococcus agalactiae H36B] gi|77176126|gb|EAO78898.1| DNA repair protein RecO [Streptococcus agalactiae H36B] Length = 243 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 14/167 (8%) Query: 13 RSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR------SRLAQNL 66 R+Y E + ++++ T G+ + FV++ + +LQ + + S + Sbjct: 4 RNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDDYK 63 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 F+ + S L I L + + +L+ L L + Sbjct: 64 EVLAFQEINS-------DLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGL 116 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + E+ LL+ G L+ CV S K G +C Sbjct: 117 DYEILTNIFEVQLLERFGVALNFHDCVFCHRAGLPFDFSHKYSGLLC 163 >gi|169628765|ref|YP_001702414.1| DNA repair protein RecO [Mycobacterium abscessus ATCC 19977] gi|238688930|sp|B1MN48|RECO_MYCA9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169240732|emb|CAM61760.1| DNA repair protein RecO [Mycobacterium abscessus] Length = 261 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 18/161 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TRQ+G + + R + L+ + V Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSKFGSRLEPFAHIDVQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRFL-----PEREPCLELYDML 114 ++ + + +++ A ++S YG + + ER P + L+ + Sbjct: 64 GRNLDIVT-QVQAIDAFAADIVSD----YGRYTTACAILETAERIAGEERAPAVALHRLT 118 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCV 152 L ++ + + LL+ + G+ + +C Sbjct: 119 VGALRAIADQQRSRELIL--DAYLLRAMSIAGWAPAIGECA 157 >gi|240172989|ref|ZP_04751647.1| DNA repair protein RecO [Mycobacterium kansasii ATCC 12478] Length = 265 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 58/157 (36%), Gaps = 10/157 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TR +G + + R + L+ + Sbjct: 4 YRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHP 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFL 118 ++ + +++ +++ +++ L ER P L+ + L Sbjct: 64 GRNLDIVT-QVVSVDAFATDIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTVGAL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCV 152 + + ++ LL+ +G LT+C Sbjct: 123 RAVADGR-RPRDLL-LDAYLLRAMGIAGWAPALTECA 157 >gi|159899227|ref|YP_001545474.1| DNA repair protein RecO [Herpetosiphon aurantiacus ATCC 23779] gi|238687077|sp|A9B168|RECO_HERA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|159892266|gb|ABX05346.1| DNA repair protein RecO [Herpetosiphon aurantiacus ATCC 23779] Length = 253 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 38/195 (19%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + +A+I+ GE + IL + T +G+ R +M S+L Sbjct: 6 YTTEALIIRRSDVGEADRILTIYTPHHGKLSVTARGV--RKM--------------TSKL 49 Query: 63 AQNLGEF---RFEVLESHCAKLLSSSLFLYGLQSI--------------VPLFRFLPERE 105 A +L F R ++ + +++ S + +S+ L + P+ Sbjct: 50 AGHLELFIHTRLQLAKGRSFDVVTESRVVQPFRSLREDLSRISQGYYVAELLDQMTPDES 109 Query: 106 PCLELYDM---LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDL 160 L+ + L+ I EL L G+ L C D Sbjct: 110 DNPALFRLTCETLAALDVLDDVVRRDVILRYYELHTLILSGYRPHLFDCANCERELSPDA 169 Query: 161 LWVSPKSGGAVCRSV 175 SP +GG +C+ Sbjct: 170 DRYSPITGGVLCQQC 184 >gi|153005322|ref|YP_001379647.1| DNA repair protein RecO [Anaeromyxobacter sp. Fw109-5] gi|171769309|sp|A7HD67|RECO_ANADF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|152028895|gb|ABS26663.1| DNA repair protein RecO [Anaeromyxobacter sp. Fw109-5] Length = 256 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 5/153 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR-LA 63 ++L YGE + ++ ++TR+ G+ GF R ++ R + L+ L+ R R + Sbjct: 9 GLVLRAVDYGESDRVVTLLTRERGKVSGFARGARASRRRFGGALEPFTLLVAEARERPGS 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCHK 122 LG VL +H + + L R L + EP EL +L +L Sbjct: 69 DMLGLESVSVLRAH-GGIRGELARIACAGYAAELSRELVRDHEPHAELLALLLEYLGALD 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL L+ G + CV G Sbjct: 128 AGPARPEGLRAFELGALRAAGLMPRVDACVACG 160 >gi|289750962|ref|ZP_06510340.1| DNA repair protein recO [Mycobacterium tuberculosis T92] gi|289691549|gb|EFD58978.1| DNA repair protein recO [Mycobacterium tuberculosis T92] Length = 148 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRV 56 M ++D A++L GE + I+ ++TR +G + + R + L+ + V Sbjct: 33 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEV 91 >gi|227892550|ref|ZP_04010355.1| recombination protein O [Lactobacillus ultunensis DSM 16047] gi|227865671|gb|EEJ73092.1| recombination protein O [Lactobacillus ultunensis DSM 16047] Length = 250 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 8/188 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQ--AGNLVRVNWRS 60 II + Y E +++ ++MT+Q G V+ +S L G + Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIITLIVKGALRPKSRLSAATLNFSTGTYIIYT-SG 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 NL ++ ++ + Y + E +P + Y++ LN Sbjct: 68 HGLSNLRTYK--EVKQFDGLYHDLTKNAYASFIFDLIDHAFVEYQPIGKYYNLALFALNK 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I +++ +L G +L CV+ G + + S K GG VC Sbjct: 126 IDKGVDSEMITQIVQMKMLSAYGVEPELRHCVICGKEKGVFDYSIKLGGIVCSDHFGVVN 185 Query: 181 EKMLVLPS 188 +M + P Sbjct: 186 SRMHLKPK 193 >gi|114048419|ref|YP_738969.1| DNA repair protein RecO [Shewanella sp. MR-7] gi|113889861|gb|ABI43912.1| DNA repair protein RecO [Shewanella sp. MR-7] Length = 233 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 13/147 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E + ++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSALVNLLVDGIGRVDAVARVGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFL---PEREPCLELYDMLNIFLNCH 121 +E+ + S LY G+ L R L E +Y + L Sbjct: 62 --LKNISQIEAAAPAVPLSGYSLYAGMYINELLMRTLSVHHNAEALFLIYHQALVGLAA- 118 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDL 148 +EL LL+ +G L Sbjct: 119 ---QFCESKLRYLELALLRELGAMPSL 142 >gi|260101320|ref|ZP_05751557.1| DNA repair protein RecO [Lactobacillus helveticus DSM 20075] gi|260084905|gb|EEW69025.1| DNA repair protein RecO [Lactobacillus helveticus DSM 20075] gi|328465882|gb|EGF37065.1| DNA repair protein recO [Lactobacillus helveticus MTCC 5463] Length = 250 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 24/196 (12%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ ++MT+Q G V+ L+ + + + L + Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIITLIVKGA--------LRPKSQLSA---ATLNFS 57 Query: 66 LGEF-------------RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 +G + ++ ++ + Y + E +P + YD Sbjct: 58 MGTYVIYTSGHGLSNLRTYKEVKQFDGLYRDLTKNAYTSFIFDLIDHAFVEYQPLGKYYD 117 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + L I +++ +L G +L CV+ G + + S K GG VC Sbjct: 118 LAVFALKKIDAGVDNEMITQIVQMKMLSAFGVEPELRHCVICGKERGVFDYSIKLGGIVC 177 Query: 173 RSVGLPYAEKMLVLPS 188 + ++ + P Sbjct: 178 SNHFAKINSRLHLTPK 193 >gi|170782100|ref|YP_001710433.1| DNA repair protein RecO [Clavibacter michiganensis subsp. sepedonicus] gi|169156669|emb|CAQ01827.1| DNA repair protein RecO [Clavibacter michiganensis subsp. sepedonicus] Length = 309 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 6/185 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D+ ++L GE + I+ +++RQ+G+ + + + L+ + + Sbjct: 4 YRDEIVVLRTHKLGEADRIVTMLSRQHGKIRAVAKGVRRTQSKFGARLEPFMVADAQFFE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + E + S+ A + + ++V + E E L+ Y +L L Sbjct: 64 GRTLDII--TQAESIASYGALIAADYGSYTAASAMVETADRVTEDEGSLQQYLLLVGALR 121 Query: 120 CHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + L L G+ C VTG + GG V + P Sbjct: 122 SLSRREHGASLTLDSYLLRSLSMAGWAPSFQDCAVTGAPGPHSAFVVQLGGVVADAAAPP 181 Query: 179 YAEKM 183 + ++ Sbjct: 182 GSPRL 186 >gi|254374639|ref|ZP_04990120.1| hypothetical protein FTDG_00813 [Francisella novicida GA99-3548] gi|151572358|gb|EDN38012.1| hypothetical protein FTDG_00813 [Francisella novicida GA99-3548] Length = 232 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ V TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQP--LVKLRGQINLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 L + E +ES K + L L + ++ L + E + L+D + L Sbjct: 64 GLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEED---ILFDKYDFILRNID 120 Query: 123 IPS 125 + Sbjct: 121 EAN 123 >gi|325290524|ref|YP_004266705.1| DNA replication and repair protein RecO [Syntrophobotulus glycolicus DSM 8271] gi|324965925|gb|ADY56704.1| DNA replication and repair protein RecO [Syntrophobotulus glycolicus DSM 8271] Length = 247 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 62/175 (35%), Gaps = 8/175 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN-WR 59 + DAI++ R YGE + +L + R+ G+ + + + + Q ++ Sbjct: 4 YHADAIVIRTREYGEADKLLTLFAREKGKLEVIAKGARKPASKQRGGTQLFTYADFLIYK 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + ES + G L +P ++ +L + Sbjct: 64 GKTLDLIN--QVHPKESFGHIWKDFDRNIAGTAMAELLDAATIREQPEPQV-FVLFLSFL 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWV-SPKSGGAVC 172 L L++ +G+ D+ C+ G + + +V ++GG +C Sbjct: 121 FLLEGIDPYLAQAAFSLRLMRLLGYLPDIGACLDCGESSPEKQYVLDAETGGILC 175 >gi|148272759|ref|YP_001222320.1| DNA repair protein /recombination protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830689|emb|CAN01629.1| DNA repair protein /recombination protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 309 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 68/187 (36%), Gaps = 6/187 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WR 59 ++D+ ++L GE + I+ +++RQ+G+ + + + L+ + + Sbjct: 4 YRDEIVVLRTHKLGEADRIVTMLSRQHGKIRAVAKGVRRTQSKFGARLEPFMVADAQFFE 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + E + S+ A + + ++V + E E L+ Y +L L Sbjct: 64 GRTLDII--TQAESIASYGALIAADYGSYTAASAMVETADRVTEDEGSLQQYLLLVGALR 121 Query: 120 CHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + L L G+ C VTG + GG V + P Sbjct: 122 SLSRHEHGASLTLDSYLLRSLSMAGWAPSFQDCAVTGAPGPHSAFVVQLGGVVADAAAPP 181 Query: 179 YAEKMLV 185 + ++ Sbjct: 182 GSPRLDP 188 >gi|117921463|ref|YP_870655.1| DNA repair protein RecO [Shewanella sp. ANA-3] gi|117613795|gb|ABK49249.1| DNA repair protein RecO [Shewanella sp. ANA-3] Length = 233 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 13/147 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E + ++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSALVNLLVDGIGRVDAVARVGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFL---PEREPCLELYDMLNIFLNCH 121 +E+ + S LY G+ L R L E +Y + L Sbjct: 62 --LKNISQIEAAAPAVPLSGYSLYAGMYINELLMRILSVHHNAEALFLIYHQALVGLAA- 118 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDL 148 +EL LL+ +G L Sbjct: 119 ---QFCESKLRYLELALLRELGAMPSL 142 >gi|229552354|ref|ZP_04441079.1| recombination protein O [Lactobacillus rhamnosus LMS2-1] gi|258539725|ref|YP_003174224.1| DNA repair protein recO [Lactobacillus rhamnosus Lc 705] gi|229314336|gb|EEN80309.1| recombination protein O [Lactobacillus rhamnosus LMS2-1] gi|257151401|emb|CAR90373.1| DNA repair protein recO [Lactobacillus rhamnosus Lc 705] Length = 271 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 10/206 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 + +++ ++Y E +++++++T Q+G+ + V + + + R Sbjct: 9 EGLVMSRQNYRESDMLVKILTDQFGKKMFLVNRARKPGFTLAAGILPFTHADYIGEVR-D 67 Query: 64 QNLGEFRFEVLESHCAKLLSSS---LFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L ++S S+ L Y L P+ P + + L+ Sbjct: 68 SGLSYLS--AIKSPTQYRQISNDITLNAYAAYIFGLLDLAFPDERPVGFWFKQVKQALHL 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I +E+ +LK G + CV+ G T L S GG +C+ Sbjct: 126 IDTGLDPQIIANVVEVQMLKAYGVEPNWRGCVIDGRTDLPLDFSESYGGLLCQQHWDKDP 185 Query: 181 EKMLVLPS--FLWKEEQTIDADSLKS 204 ++ P F + T+D +K Sbjct: 186 HRLHASPRAIFYLRRFSTLDLSQVKR 211 >gi|227878693|ref|ZP_03996607.1| recombination protein O [Lactobacillus crispatus JV-V01] gi|256843287|ref|ZP_05548775.1| DNA repair protein RecO [Lactobacillus crispatus 125-2-CHN] gi|256850356|ref|ZP_05555784.1| DNA repair protein recO [Lactobacillus crispatus MV-1A-US] gi|262046496|ref|ZP_06019458.1| DNA repair protein RecO [Lactobacillus crispatus MV-3A-US] gi|293380130|ref|ZP_06626217.1| DNA repair protein RecO [Lactobacillus crispatus 214-1] gi|312978178|ref|ZP_07789922.1| DNA repair protein RecO [Lactobacillus crispatus CTV-05] gi|227861708|gb|EEJ69313.1| recombination protein O [Lactobacillus crispatus JV-V01] gi|256614707|gb|EEU19908.1| DNA repair protein RecO [Lactobacillus crispatus 125-2-CHN] gi|256712753|gb|EEU27746.1| DNA repair protein recO [Lactobacillus crispatus MV-1A-US] gi|260573367|gb|EEX29925.1| DNA repair protein RecO [Lactobacillus crispatus MV-3A-US] gi|290923300|gb|EFE00216.1| DNA repair protein RecO [Lactobacillus crispatus 214-1] gi|310894896|gb|EFQ43966.1| DNA repair protein RecO [Lactobacillus crispatus CTV-05] Length = 251 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 62/189 (32%), Gaps = 10/189 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQ--AGNLVRVNWRS 60 II + Y E +++ ++MT+Q G V+ +S L G V Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIMTLIVKGALRPKSRLSAATLNFSIGTYVIYT--- 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 + L R L + + I L E +P + YD+ L Sbjct: 66 -SEKGLSNLRTYKGARQFDGLYNDLTKNAYISFIFDLIDHAFVEYQPIGKYYDLALFALK 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I +++ +L G L CV+ G + + S K GG +C Sbjct: 125 KIDSGVDAEMITQIVQMKILAAYGVEPQLKHCVICGKEKGVFDYSIKMGGVICSDHFSTV 184 Query: 180 AEKMLVLPS 188 +M + P Sbjct: 185 TSRMHLKPK 193 >gi|161507650|ref|YP_001577604.1| DNA repair protein RecO [Lactobacillus helveticus DPC 4571] gi|172048291|sp|A8YVM6|RECO_LACH4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|160348639|gb|ABX27313.1| DNA repair protein RecO [Lactobacillus helveticus DPC 4571] Length = 250 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 67/196 (34%), Gaps = 24/196 (12%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ ++MT+Q G V+ L+ + + + L + Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIITLIVKGA--------LRPKSQLSA---ATLNFS 57 Query: 66 LGEF-------------RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 +G + ++ ++ + Y + E +P + YD Sbjct: 58 MGTYVIYTSGHGLSNLRTYKEVKQFDGLYRDLTKNAYTSFIFDLIDHAFVEYQPLGKYYD 117 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + L I +++ +L G +L CV+ G + + S K GG VC Sbjct: 118 LAVFALKKIDAGVDNEMITQIVQMKMLSAFGVEPELRHCVICGKERGVFDYSIKLGGIVC 177 Query: 173 RSVGLPYAEKMLVLPS 188 ++ + P Sbjct: 178 SDHFAKVNSRLHLTPK 193 >gi|262368559|ref|ZP_06061888.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046] gi|262316237|gb|EEY97275.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046] Length = 236 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y E++ I+ + T+++GR G +R P Q + + + Sbjct: 7 HGYLIHHRKYRERSHIVHLFTQEHGRVDGILR----QTPPPQYQP---ICLQASGKSE-- 57 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-----ERE-PCLELYDMLNIFLN 119 L F + + + F G L R P E+ L Sbjct: 58 LKNFTKLEIVNQPIFFFGDAFF-SGFYLNEILLRLCPLEVQMEQSFAQYAHTLTQLQQLA 116 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 P+ K ++ E LL+++G+ LD + Sbjct: 117 QQADPNQFLKQILRQFEHELLEDLGYALDFS 147 >gi|227890108|ref|ZP_04007913.1| recombination protein O [Lactobacillus johnsonii ATCC 33200] gi|227849552|gb|EEJ59638.1| recombination protein O [Lactobacillus johnsonii ATCC 33200] Length = 250 Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 69/192 (35%), Gaps = 16/192 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNL------VRV 56 +I + Y E +++ ++MT+ +G R +S L N V Sbjct: 9 QGLIFKRKKYKEADVLTKIMTKDHGIFTIDARGALRPKSRLGAATL---NFSYGKYIVNT 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 NW+ L F+ ++ L + Y + L E + YD++ Sbjct: 66 NWKG--ISTLRTFK--DVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKNIGSFYDLIMK 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + I ++L LL G L +C++ G Q + S + GG +C Sbjct: 122 ALLKINLGEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGVFDYSMELGGIICSDHF 181 Query: 177 LPYAEKMLVLPS 188 +++M + P Sbjct: 182 NSVSQRMHLDPK 193 >gi|229493249|ref|ZP_04387041.1| DNA repair protein RecO [Rhodococcus erythropolis SK121] gi|229319980|gb|EEN85809.1| DNA repair protein RecO [Rhodococcus erythropolis SK121] Length = 327 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 68/179 (37%), Gaps = 14/179 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D A++L + GE + I+ ++TRQ+G + + + + L+ + V Sbjct: 60 YRDTAVVLRLHKLGEADHIVTLLTRQFGLVRAVAKGVRRTTSKFGARLEPFAHIDVQL-- 117 Query: 61 RLA-QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNI 116 L +NL + +++ ++ +++ L ER P +L + Sbjct: 118 -LPGKNLDIITQVQTVDAFATDIVDDYSRYTTACAVLETAERLAGEERAPAPQLQRLTVG 176 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L FV ++ LL+ +G+ L +C +GGAVC Sbjct: 177 ALRAIAE-QARPVEFV-LDAFLLRAMGYAGWAPALEECARCSAPGPHRAFHVAAGGAVC 233 >gi|113971181|ref|YP_734974.1| DNA repair protein RecO [Shewanella sp. MR-4] gi|113885865|gb|ABI39917.1| DNA repair protein RecO [Shewanella sp. MR-4] Length = 233 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 13/147 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLAQN 65 +L R Y E + ++ ++ GR R G R ++ ILQ + + + Sbjct: 4 GYVLHHRPYRESSALVNLLVDGIGRVDAIARVGSGKRSIKSILQPFQPLIFEFSGKSE-- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFL---PEREPCLELYDMLNIFLNCH 121 +E+ + S LY G+ L R L E +Y + L Sbjct: 62 --LKNISQIEAAAPAVPLSGYSLYAGMYINELLMRTLSVHHNAEALFLIYHQALVGLAA- 118 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDL 148 +EL LL+ +G L Sbjct: 119 ---QFCESKLRYLELALLRELGAMPSL 142 >gi|255320777|ref|ZP_05361952.1| DNA repair protein RecO [Acinetobacter radioresistens SK82] gi|262379447|ref|ZP_06072603.1| DNA repair protein RecO [Acinetobacter radioresistens SH164] gi|255302154|gb|EET81396.1| DNA repair protein RecO [Acinetobacter radioresistens SK82] gi|262298904|gb|EEY86817.1| DNA repair protein RecO [Acinetobacter radioresistens SH164] Length = 236 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 17/151 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ ++ + T +YGR G +R P Q+ ++ + + L Sbjct: 7 HGYLIHYRKYREKSHLVYLFTEEYGRIDGILR----QVPPPQYQSLA-LQASGKGELKN- 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + E++ F G L R P E + Y + L + + Sbjct: 61 --FSKLEIVNQ--PIFFYGDAFFSGFYLNELLLRLCPLEEAMPQTYQQYQLTLVKLQQLA 116 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLT 149 V +I Q E +LL+ +G+ +D + Sbjct: 117 VNTQPGLLLRQILRQFEHILLEELGYAIDFS 147 >gi|210617162|ref|ZP_03291429.1| hypothetical protein CLONEX_03651 [Clostridium nexile DSM 1787] gi|210149437|gb|EEA80446.1| hypothetical protein CLONEX_03651 [Clostridium nexile DSM 1787] Length = 242 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 36/194 (18%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +IL GE + + ++T++ G+ F + + + +L A N Sbjct: 2 GMILSASPIGENDKRIVILTKEKGKISAFAKGAR-RQNSHLLGATNPFSF---------- 50 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-----------------PEREPCLE 109 GEF S L+ +++ Y ++ L ER+ Sbjct: 51 GEFVLYEGRS-SYNLMQANISNYFMELATDLEGAYYGFYFMEFADYYTKEHNDERQMLRL 109 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 LY L + I + V+ EL L G D+ C G + + S ++ Sbjct: 110 LYQTLRAL-----SSNKIPRELVRYIFELKTLVVNGEYPDVFHCTGCGAQEQGVLFSSRN 164 Query: 168 GGAVCRSVGLPYAE 181 G VC ++ Sbjct: 165 RGIVCEKCRRTVSD 178 >gi|257791389|ref|YP_003181995.1| DNA repair protein RecO [Eggerthella lenta DSM 2243] gi|257475286|gb|ACV55606.1| DNA repair protein RecO [Eggerthella lenta DSM 2243] Length = 256 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 13/194 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-R 59 + AI+L GE ++IL ++ + + + L+ ++V + R Sbjct: 6 YDARAIVLRKTKLGESDLILALLAEDGSQIRAVAKGARKPASSFAARLELYSVVDLLVAR 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + E R + + L R L+ + L+ Sbjct: 66 GRSLDIVKEARLVESNERLRRDIE--HAAGAAPIAELLDRVTQMGLENPRLFALTRTALS 123 Query: 120 CHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV------TQDLLWVSPKSGGAV 171 P+ + + L L G L CV G L+ +S + GGAV Sbjct: 124 SLGRVDPAQVPAVCAAHLLKTLAFAGLRPSLDVCVSCGRDVEAVPESGLMALSYQEGGAV 183 Query: 172 CRSVGLPYAEKMLV 185 C + ++ Sbjct: 184 CAACRSSVETVLVP 197 >gi|157960867|ref|YP_001500901.1| DNA repair protein RecO [Shewanella pealeana ATCC 700345] gi|157845867|gb|ABV86366.1| DNA repair protein RecO [Shewanella pealeana ATCC 700345] Length = 229 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 7/147 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA 63 + +L R + + ++I+ ++ GR R G + ++ I+Q + + Sbjct: 2 ERGYVLHSRHFRDGSVIVNLLVDGKGRVDAVARLGGAKNSIRSIIQPFQPIIFQLHGKTD 61 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L + S L LY GL L R L + L+ + L Sbjct: 62 --LKNLKQVEAASPAVPLTGD--CLYSGLYLNELLIRCLSVQHSAENLFFDYHRTLIAMA 117 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLT 149 E LL +G L Sbjct: 118 T-EFNQSQLRYFEHALLLELGTMPSLD 143 >gi|332529449|ref|ZP_08405408.1| DNA repair protein RecO [Hylemonella gracilis ATCC 19624] gi|332041095|gb|EGI77462.1| DNA repair protein RecO [Hylemonella gracilis ATCC 19624] Length = 249 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 ++ A +L + E ++ILEV TR +GR + + + +P+L +R+ + Sbjct: 8 EEPAFVLHRYDWSESSLILEVFTRHHGRVALAAKGVKRPTSNFRPVLLPLQPLRLGYAGE 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + E ++ + L G L R L +P L+D+ + Sbjct: 68 GEVR----TLKSAEWAGGHVMPTGESLLSGYYLNELLIRLLARDDPHPALFDIYAQVVRL 123 Query: 121 H--KIPSVIGKIFVQIE 135 + V+ E Sbjct: 124 LASEHGEVLQAALRAFE 140 >gi|224542129|ref|ZP_03682668.1| hypothetical protein CATMIT_01304 [Catenibacterium mitsuokai DSM 15897] gi|224524966|gb|EEF94071.1| hypothetical protein CATMIT_01304 [Catenibacterium mitsuokai DSM 15897] Length = 245 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 8/184 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ---SHRMQPILQAG-NLVRVNWR 59 + + ++L + E + IL + T YGR + + + S + + + +L +N R Sbjct: 8 KTEGVVLKITPSKESDAILSIYTHDYGRISVYGKGIRKINSKNARGVTPSSLSLFELNIR 67 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 L+ L H + + + L + +R++PE +P L+ Y L L Sbjct: 68 KGLST-LVRATGIEYYIHIQDHIETDILAQCL--LEYYYRYVPENKPDLDTYAFLVDALK 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I+ I + ++K+ G L++ CV G T + S GG VCR P Sbjct: 125 AIDTGYSYKLIYALILVFIMKDNGIELEVDGCVHCGHT-SVTSFSLVDGGFVCRKHQTPQ 183 Query: 180 AEKM 183 +M Sbjct: 184 DVQM 187 >gi|293609823|ref|ZP_06692125.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828275|gb|EFF86638.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 237 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 17/150 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRMQATGKSELKN- 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLN 119 + E+L + + L IV R P E + ++ + L+ Sbjct: 62 --FTKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDL 148 H+ P + + ++ E +LL +G+ +D Sbjct: 118 SHENPDLFLRQILRQFEHVLLPELGYAIDF 147 >gi|291542201|emb|CBL15311.1| DNA repair protein RecO [Ruminococcus bromii L2-63] Length = 248 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 73/182 (40%), Gaps = 11/182 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRV 56 M ++ + +I+ ++ GE++ ++ +T+ G FV+ ++ + L + + + + Sbjct: 1 MKFRTEGLIIKEQNIGEQDKLVFALTKSNGVIRAFVKGAKNIKNGKCAAASLLSYSRLTI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 ++ R + +GE + + +KL S + Q L + RE + + L + Sbjct: 61 -YKGRESYIIGEA--QPIR-IFSKLRSDVTKMCLAQYFCELALTICPREQKADSFLSLVL 116 Query: 117 FLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCR 173 + ++ +E+ L G+ DL C G L++ P+ G C Sbjct: 117 NSLYLLSENKRSADLIKPCLEMRLASMAGYMPDLRMCRECGEYITPLMYFLPRIGALECA 176 Query: 174 SV 175 Sbjct: 177 DC 178 >gi|325123049|gb|ADY82572.1| DNA repair protein [Acinetobacter calcoaceticus PHEA-2] Length = 227 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 17/148 (11%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 ++ R Y EK+ I+ + T++YGR G +R P Q ++ +S L Sbjct: 1 MIHHRKYREKSHIVHLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN---F 52 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD------MLNIFLNCHK 122 + E+L + + L IV R P E + ++ + L+ H+ Sbjct: 53 TKLEILNQPVFFFGDAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLSSHE 110 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 P + + ++ E +LL +G+ +D + Sbjct: 111 NPDLFLRQILRQFEHVLLPELGYAIDFS 138 >gi|118497828|ref|YP_898878.1| RecFOR complex, RecO component [Francisella tularensis subsp. novicida U112] gi|194323801|ref|ZP_03057577.1| DNA repair protein RecO [Francisella tularensis subsp. novicida FTE] gi|254764633|sp|A0Q7A9|RECO_FRATN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118423734|gb|ABK90124.1| RecFOR complex, RecO component [Francisella novicida U112] gi|194322165|gb|EDX19647.1| DNA repair protein RecO [Francisella tularensis subsp. novicida FTE] Length = 232 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 12/123 (9%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---SRLAQ 64 IL R Y E ++++ V TR++G+ + + + + Q LV++ + ++ A Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQP--LVKLRGQINLAKKAD 63 Query: 65 NLG-EFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHK 122 +L + E +ES K + L L + ++ L + E + L+D + L Sbjct: 64 SLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEED---VLFDKYDFILRNID 120 Query: 123 IPS 125 + Sbjct: 121 EAN 123 >gi|215427738|ref|ZP_03425657.1| DNA repair protein RecO [Mycobacterium tuberculosis T92] Length = 124 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRV 56 M ++D A++L GE + I+ ++TR +G + + R + L+ + V Sbjct: 9 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEV 67 >gi|317504156|ref|ZP_07962155.1| recombination protein O [Prevotella salivae DSM 15606] gi|315664732|gb|EFV04400.1| recombination protein O [Prevotella salivae DSM 15606] Length = 240 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 13/158 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +GE ++++V T Q GR VR S + + Q +++ + Sbjct: 1 MLMKTKAIVLHAFKFGENKLMVDVFTEQQGRISFAVRIVNSPKAKIKKQYFQPFSVLEIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-----PEREPCLELYD 112 + R N+ F + + L L SI L + L++ Sbjct: 61 YDYRQKTNIQTFNNVGIAYPFGSIPFEPLKL----SICFFLAELTSYATHGEQENTHLFN 116 Query: 113 MLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + + F + + LL+ +GF +L Sbjct: 117 YIVSSIEWLDRCDTGFSNFHLVYIVHLLRFLGFYPNLE 154 >gi|296188180|ref|ZP_06856572.1| DNA repair protein RecO [Clostridium carboxidivorans P7] gi|296047306|gb|EFG86748.1| DNA repair protein RecO [Clostridium carboxidivorans P7] Length = 257 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 17/184 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQ--AGNLVRVN 57 ++ A+++ + E + ++ + + + G+ + + + LQ G+ V Sbjct: 13 FKTRAVVIKTQDIKESDKLVWLFSEKLGKISTIAKGSKKSSNKLFTSTLQFSYGDYVVYK 72 Query: 58 WRSRLAQNLGEFRFEVLES--HCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDML 114 +S + + +LL+ L Y + + + E EL+ +L Sbjct: 73 GKS-------LYVINESTAIDSFQELLNDLDKLTYASYFCEIIDISMQDEESNRELFKLL 125 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVC 172 K V +I + E+ L+ G+G +L C + + ++S + G VC Sbjct: 126 ITAFYFLKNKVVDIEILARAFEIKALQATGYGFNLEHCCMCRKKINTSNYISFQYSGGVC 185 Query: 173 RSVG 176 + Sbjct: 186 QECA 189 >gi|260438845|ref|ZP_05792661.1| DNA repair protein RecO [Butyrivibrio crossotus DSM 2876] gi|292808684|gb|EFF67889.1| DNA repair protein RecO [Butyrivibrio crossotus DSM 2876] Length = 247 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 30/198 (15%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + +++ GE + + ++T++ G+ FVR + + GN + Sbjct: 4 QIKVRGMVISSSPIGENDKRVVLLTKEKGKISAFVRGAR--------RPGNHLMAA---- 51 Query: 62 LAQNLGEFRFEVLESHCAK-------------LLSSSLFLYGLQSIVPLFRFLP-EREPC 107 + + F ++ A L S Y + L + E E Sbjct: 52 -SDSFSFGIFYLMYGRDAYTVVNAEISNFFRELTSDLQKTYTAYYFLELAEYFTVENEDE 110 Query: 108 LELYDMLNIFLNCHKIPSVIGKI--FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + +++ + + ++ ++ EL L G + C G + L S Sbjct: 111 SMMLNLIYASFSALVKGRINPRLIRYI-FELKTLVINGEYPEFFACRNCGTKEHLTGFSI 169 Query: 166 KSGGAVCRSVGLPYAEKM 183 G +C++ + M Sbjct: 170 FHDGILCKNCAKVSKDVM 187 >gi|255525311|ref|ZP_05392251.1| DNA repair protein RecO [Clostridium carboxidivorans P7] gi|255510983|gb|EET87283.1| DNA repair protein RecO [Clostridium carboxidivorans P7] Length = 258 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 17/184 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQ--AGNLVRVN 57 ++ A+++ + E + ++ + + + G+ + + + LQ G+ V Sbjct: 14 FKTRAVVIKTQDIKESDKLVWLFSEKLGKISTIAKGSKKSSNKLFTSTLQFSYGDYVVYK 73 Query: 58 WRSRLAQNLGEFRFEVLES--HCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDML 114 +S + + +LL+ L Y + + + E EL+ +L Sbjct: 74 GKS-------LYVINESTAIDSFQELLNDLDKLTYASYFCEIIDISMQDEESNRELFKLL 126 Query: 115 NIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVC 172 K V +I + E+ L+ G+G +L C + + ++S + G VC Sbjct: 127 ITAFYFLKNKVVDIEILARAFEIKALQATGYGFNLEHCCMCRKKINTSNYISFQYSGGVC 186 Query: 173 RSVG 176 + Sbjct: 187 QECA 190 >gi|255282514|ref|ZP_05347069.1| DNA repair protein RecO [Bryantella formatexigens DSM 14469] gi|255266807|gb|EET60012.1| DNA repair protein RecO [Bryantella formatexigens DSM 14469] Length = 247 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV----NWRSRL 62 ++L GE + + ++T++ G+ GF + + + P++ A + R Sbjct: 9 GMVLSAVPVGEYDKRIVLLTKERGKISGFAKGAR-RQNSPLMAAAKPFSFGTFECYEGRT 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + N+ ++ ++ L YG+ + + E EL +L + L Sbjct: 68 SYNI--YQAQISNYFEGLSLDFEGAYYGMYFLEFADYYARENSDEKELLKLLYVSLRAL- 124 Query: 123 IPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV-GLPY 179 + K V+ EL + G ++ C V G T+ L S G VC + Sbjct: 125 ENQHLPKKLVRYVFELRAMVINGEYPEVFCCTVCGSTEHLTGYSHAGNGVVCADCLRAAH 184 Query: 180 AEKML 184 AE +L Sbjct: 185 AETLL 189 >gi|78357078|ref|YP_388527.1| DNA repair protein RecO [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552271|sp|Q30ZR4|RECO_DESDG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78219483|gb|ABB38832.1| DNA replication and repair protein RecO [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 248 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 16/167 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + + A++L + E ++ + ++ G F G R + L A N V V Sbjct: 1 MDFTEKALVLRTGRFREADLWVRFLSPSRGVITAFAFGGCRSRRRFCGCLDALNHVLVKV 60 Query: 59 RS--R-----LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 S R L + G + + + + ++ + + PE + Y Sbjct: 61 SSDKRRTYLCLDE--GTLLNGPVRLR-SDWGRTGVAANCIKFVEAM-GVGPEGAA--DAY 114 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVT 157 D+ L + V+ +IF V L + G+ +D +C G+ Sbjct: 115 DLTCGMLELLETADVVPEIFPVLFRGRLAFDQGYRIDPVRCARCGMR 161 >gi|315606672|ref|ZP_07881683.1| recombination protein O [Prevotella buccae ATCC 33574] gi|315251682|gb|EFU31660.1| recombination protein O [Prevotella buccae ATCC 33574] Length = 241 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 17/160 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L GE I++++T + GR R S + + Q L+ + Sbjct: 1 MLVKTKAIVLHSIKLGESKTIVDMLTERQGRVSFVCRIASSGKAKIKKQFFQPLTLLELE 60 Query: 58 WRS---RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL----PEREPCLEL 110 + S R +++G+ R + + L + L FL E + L Sbjct: 61 YDSRPGRTLRHIGDIRI------LTPFRTLPFDAFKLSIALFLAEFLYYSTREEQENEPL 114 Query: 111 YDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + + + F + + L + IGF +L Sbjct: 115 FAYVENSILWLDGAERAYANFHLVFMMRLSRFIGFFPNLD 154 >gi|163848468|ref|YP_001636512.1| DNA repair protein RecO [Chloroflexus aurantiacus J-10-fl] gi|163669757|gb|ABY36123.1| DNA repair protein RecO [Chloroflexus aurantiacus J-10-fl] Length = 256 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 6/174 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++ +A+IL + E + +L + T G+ + + + + + Sbjct: 11 YRSEAVILRRTDFAEADRLLLIATPT-GKRWVIAKGARKMKSRLAGHIELFTHAQMMFAV 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH 121 +NL + L + L + L R E E L+ +L L Sbjct: 70 GRNLDIVTQSQIVHAFPVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVETLQAL 129 Query: 122 KIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLW--VSPKSGGAVC 172 S ++ ++ EL LL +G+ L CVV SP GG +C Sbjct: 130 D-GSANPELTLRSFELHLLHILGYRPQLHYCVVCNELLTPAADRYSPTLGGVLC 182 >gi|254468532|ref|ZP_05081938.1| DNA repair protein RecO [beta proteobacterium KB13] gi|207087342|gb|EDZ64625.1| DNA repair protein RecO [beta proteobacterium KB13] Length = 234 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 59/145 (40%), Gaps = 5/145 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQN 65 IL + E ++I+E ++ +GR + + R ++ LQ +++ W S ++ Sbjct: 10 YILHTYPFKETSLIVEALSENFGRISLLAKGARRPRSLLRGYLQPFQMIQATW-SNVSDL 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + E + L + + G + + LP+ E ++ + L + Sbjct: 69 KTLYNVEWNSKYLG--LKNQALICGFYMNELIMKLLPKDESSNVFFNFYHQQLEELSLNV 126 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + EL LL+ +G+ ++L + Sbjct: 127 GYESLLRLFELKLLEELGYKVNLDE 151 >gi|222526397|ref|YP_002570868.1| DNA repair protein RecO [Chloroflexus sp. Y-400-fl] gi|222450276|gb|ACM54542.1| DNA repair protein RecO [Chloroflexus sp. Y-400-fl] Length = 251 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 6/174 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++ +A+IL + E + +L + T G+ + + + + + Sbjct: 6 YRSEAVILRRTDFAEADRLLLIATPT-GKRWVIAKGARKMKSRLAGHIELFTHAQMMFAV 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH 121 +NL + L + L + L R E E L+ +L L Sbjct: 65 GRNLDIVTQSQIVHAFPVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVETLQAL 124 Query: 122 KIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLW--VSPKSGGAVC 172 S ++ ++ EL LL +G+ L CVV SP GG +C Sbjct: 125 D-GSANPELTLRSFELHLLHILGYRPQLHYCVVCNELLTPAADRYSPTLGGVLC 177 >gi|326791153|ref|YP_004308974.1| DNA repair protein RecO [Clostridium lentocellum DSM 5427] gi|326541917|gb|ADZ83776.1| DNA repair protein RecO [Clostridium lentocellum DSM 5427] Length = 252 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 65/196 (33%), Gaps = 23/196 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV-------RNGQSHRMQPILQAGNL 53 M + A+++ GE + + + T+ GR + S + G+ Sbjct: 1 MMVRTKALVIKEYIVGESDKYITLFTKDLGRIQAIAPKAKKSDKGFASATQLFVY--GDF 58 Query: 54 VRVNWRS--RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 + +++ RL +++E S Y + ++ EL Sbjct: 59 MLTSYKDTYRLVS------VDLIEMFHNIRNDLSALSYASYMMEFIYYVTEPGLSQSELL 112 Query: 112 DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV-----TQDLLWVSP 165 + + L K + E+ L +GF L CV G+ + + S Sbjct: 113 KLTLVTLQALSKSEADYKRIRRVFEIRALGLLGFMPQLFACVDCGLAIDEKAEAHYYFSA 172 Query: 166 KSGGAVCRSVGLPYAE 181 ++GG VC+ Y + Sbjct: 173 EAGGLVCKGCKGTYED 188 >gi|153810739|ref|ZP_01963407.1| hypothetical protein RUMOBE_01123 [Ruminococcus obeum ATCC 29174] gi|149833135|gb|EDM88217.1| hypothetical protein RUMOBE_01123 [Ruminococcus obeum ATCC 29174] Length = 250 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 67/204 (32%), Gaps = 31/204 (15%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA------GNLVRVNWR 59 +++ GE + + ++TR+ G+ F + + P + A GN Sbjct: 8 QGVVISAMPVGEYDKRIVLLTRERGKISAFAKGAR-RLNSPFMAAADPFVFGNFTLYE-- 64 Query: 60 SRLAQNLGEFRF-----EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE----L 110 R + NL + E+ YG + F E E L Sbjct: 65 GRTSYNLNQVSVTHHFVELATMQPGVY-------YGYYFLELADYFGREGTDEKEMMNLL 117 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKS 167 Y + LN +I I+ EL + G L +C G ++ + S + Sbjct: 118 YVTVKALLNSRMDNRLIRCIY---ELRTMTEQGLCPQLFQCAGCGCEITGEESCFFSQEL 174 Query: 168 GGAVCRSVGLPYAEKMLVLPSFLW 191 G +C S E + PS L+ Sbjct: 175 HGILCESCARGKREARRISPSALY 198 >gi|226307200|ref|YP_002767160.1| DNA repair protein RecO [Rhodococcus erythropolis PR4] gi|259563682|sp|C1A1D6|RECO_RHOE4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226186317|dbj|BAH34421.1| DNA repair protein RecO [Rhodococcus erythropolis PR4] Length = 271 Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 68/179 (37%), Gaps = 14/179 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D A++L + GE + I+ ++TRQ+G + + + + L+ + V Sbjct: 4 YRDTAVVLRLHKLGEADHIVTLLTRQFGLVRAVAKGVRRTTSKFGARLEPFAHIDVQL-- 61 Query: 61 RLA-QNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNI 116 L +NL + +++ ++ +++ L ER P +L + Sbjct: 62 -LPGKNLDIITQVQTVDAFATDIVDDYSRYTTACAVLETAERLAGEERAPAPQLQRLTVG 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L FV ++ LL+ +G+ L +C +GGAVC Sbjct: 121 ALRAIAE-QARPVEFV-LDAFLLRAMGYAGWAPALEECARCSAPGPHRAFHVAAGGAVC 177 >gi|261366883|ref|ZP_05979766.1| DNA repair protein RecO [Subdoligranulum variabile DSM 15176] gi|282570997|gb|EFB76532.1| DNA repair protein RecO [Subdoligranulum variabile DSM 15176] Length = 247 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 15/185 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++L GE + IL ++T + G + + + G + Sbjct: 1 MQIATTGLVLRQVKVGEADQILTLLTPELGVVSASAKGSLRLKNKLFSACGLFCYSEFS- 59 Query: 61 RLAQNLGEFRFEVLE--------SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 L + E + S + +S L Y + ++ L PE + L L Sbjct: 60 -LTSGRSHYFVESAQVKKVFHGVSESVEAMS--LATYMAEIVLSLSPAPPEADAQLRLLL 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAV 171 + K+ + ++ EL + G+ +L C G + + P G + Sbjct: 117 NSLYMIGLKKLS--LRQLKTIYELRAMSMAGYQPNLLACSECGKYEGGEFYFDPVEGNLL 174 Query: 172 CRSVG 176 C Sbjct: 175 CEECA 179 >gi|146296962|ref|YP_001180733.1| DNA repair protein RecO [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166221888|sp|A4XKV7|RECO_CALS8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145410538|gb|ABP67542.1| DNA replication and repair protein RecO [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 244 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 9/184 (4%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP---ILQAGNLVRV 56 M + + I+L ++ E + IL + T + G+ +N + + P + Q Sbjct: 1 MKFIKAKGIVLKDVNFEESSKILTIFTSELGKIQALSKNCR-RTLSPLGAVSQPLIYSEF 59 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + V+ES + L +Y I + F+ + ++ +L Sbjct: 60 VFT-KTKEIYSISSASVIESFFDITQNVDLTIYSSYLIELVDSFIQIEQKNEDILRLLLN 118 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL--LWVSPKSGGAVCRS 174 L K + + E+ +L GF T+CV +L ++ S K+ G VC Sbjct: 119 SLYMLKKGADPETVCRIFEIKMLIFTGFFPQFTQCVKC-QKSNLSRIFFSFKNAGVVCAE 177 Query: 175 VGLP 178 Sbjct: 178 CKEE 181 >gi|46445974|ref|YP_007339.1| DNA repair protein RecO [Candidatus Protochlamydia amoebophila UWE25] gi|46399615|emb|CAF23064.1| hypothetical protein pc0340 [Candidatus Protochlamydia amoebophila UWE25] Length = 231 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 12/158 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + IIL V + + + IL + T++ G + ++ + + V + ++ Sbjct: 7 TAEGIILKVIPFRDYDQILAIFTKEAGLIKVLCKKSRNKKGGAKSHYTPLTKVELVYK-- 64 Query: 62 LAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE----REPCLELYDMLNI 116 + GE F + S L L + + + L + +P L+ + I Sbjct: 65 --EQKGEIFNCHEI-SILDFYRHLRTELSHLNAACDIIQLLYQTQLVGKPAPRLFTLTEI 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 +L + L LLK+ G C V Sbjct: 122 YLKKIPQTQFPDILTTSFRLKLLKHEGILAHPLVCSVC 159 >gi|199599318|ref|ZP_03212716.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus rhamnosus HN001] gi|199589757|gb|EDY97865.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus rhamnosus HN001] gi|259649851|dbj|BAI42013.1| DNA repair protein RecO [Lactobacillus rhamnosus GG] Length = 271 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 74/205 (36%), Gaps = 8/205 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 + +++ ++Y E +++++++T Q+G+ + V + + + R Sbjct: 9 EGLVMSRQNYRESDMLVKILTDQFGKKMFLVNRARKPGFTLAAGILPFTHADYIGEVR-D 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L + + +S+ + L Y L P+ P + + L+ Sbjct: 68 SGLSYLSA-IKNPTQYRQISNDITLNAYAAYIFGLLDLAFPDGRPVGFWFKQVKQALHLI 126 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I +E+ +LK G + CV+ G T L S GG +C+ Sbjct: 127 DTGLDPQIIANVVEVQMLKAYGVEPNWRGCVIDGRTDLPLDFSESYGGLLCQQHWDKDPH 186 Query: 182 KMLVLPS--FLWKEEQTIDADSLKS 204 ++ P F + T+D +K Sbjct: 187 RLHASPRAIFYLRRFSTLDLSQVKR 211 >gi|325261979|ref|ZP_08128717.1| DNA repair protein RecO [Clostridium sp. D5] gi|324033433|gb|EGB94710.1| DNA repair protein RecO [Clostridium sp. D5] Length = 246 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 26/189 (13%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L GE + + ++T++ G+ F + + P++ A N Sbjct: 8 GMVLSTAPIGEYDRRVVILTKEQGKLAAFAKGSR-RPNSPLVGAVNPFTF---------- 56 Query: 67 GEFRFEVLES-----------HCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDML 114 GEF S + A+L + YG + + E E+ +L Sbjct: 57 GEFTMYEGRSSHTIQSVNVLNYFAELREDIVGAYYGFYFLEFANYYTKESNDEREMLKLL 116 Query: 115 NIFLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + P + ++ EL G G ++ +CV G + S + GG VC Sbjct: 117 YQTMRALTNPHI-PDRLIRYIFELKAYCINGEGPEVFQCVSCGDKERPAVFSVRKGGLVC 175 Query: 173 RSVGLPYAE 181 + Sbjct: 176 SECDRDIID 184 >gi|187250605|ref|YP_001875087.1| DNA repair protein RecO [Elusimicrobium minutum Pei191] gi|186970765|gb|ACC97750.1| DNA repair protein RecO [Elusimicrobium minutum Pei191] Length = 232 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 9/150 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHL---GFVRNGQSHRMQPILQAGNLVRVNWR- 59 D+ I+L +++ E + ++ + T+ YGR V +++ + + V N+R Sbjct: 2 TDEGIVLIRQNFREADRMVSLYTKSYGRLNLRFPSVNKSAG-KLKALSEP--FVHANYRI 58 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +G +ES ++ L +FR PE +P E + +L Sbjct: 59 YVKRGAVIGCVTGGKIESVFPQIRQDGPKTKMALHFCELMFRLTPEHQPSEEKFLLLQEA 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 LN + + L L+ GFG+D Sbjct: 119 LNSLQKTDCNPSLSPAFILRLMTLAGFGMD 148 >gi|237807625|ref|YP_002892065.1| DNA repair protein RecO [Tolumonas auensis DSM 9187] gi|259563685|sp|C4LC00|RECO_TOLAT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|237499886|gb|ACQ92479.1| DNA repair protein RecO [Tolumonas auensis DSM 9187] Length = 239 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 57/146 (39%), Gaps = 6/146 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L R Y E + ++++ G+ + +S R + +LQ + +++ + + Sbjct: 8 PAFVLHTRPYRETSQLVDLFVASMGKVSVVAKGSRSPRSSVKGLLQPFLPLHIHYGGK-S 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD-MLNIFLNCHK 122 + E S L LF + + + P+ E L+ L Sbjct: 67 SLKTLLQLEA-RSPQVALQGERLFSALYLNELLYYLLEPDTE-YPGLFSGYFQTLLALAD 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 ++ + Q EL+LL+ +G+G D Sbjct: 125 QQQLVSPLLRQFELLLLQQLGYGADF 150 >gi|124008226|ref|ZP_01692923.1| DNA repair protein RecO [Microscilla marina ATCC 23134] gi|123986325|gb|EAY26147.1| DNA repair protein RecO [Microscilla marina ATCC 23134] Length = 233 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 12/155 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNL---- 53 M + I++ Y E +II ++ T + G + +S++ + Q L Sbjct: 1 MLKKTRGIVIHYTKYSETSIIAKIFTEEMGMKTYIINGVRSNKNGSKIALYQPLTLLDMV 60 Query: 54 VRVNWRSRLAQNLGEFRFE-VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 V + Q + E R + S++ L+ L + L E E L+D Sbjct: 61 VYYKQNTSNIQRISEARCHVPFHNIPFDFQKSTIALF---IAEVLSKALREEEENHLLFD 117 Query: 113 MLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGL 146 L L + F +Q + + +GF Sbjct: 118 FLLNALVWFDDTQKDFRAFHLQFLAKMPRFLGFDP 152 >gi|291524970|emb|CBK90557.1| DNA replication and repair protein RecO [Eubacterium rectale DSM 17629] Length = 242 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 12/183 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG-NLVRV----NWRSR 61 ++L G+ + + ++T++ G+ F R R L AG N + + Sbjct: 9 GMVLSAMPVGDFDKRITILTKERGKITAFARGA--RRPNSQLMAGSNPFSFGEFELFEGK 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 A +L + + ++ +L +Y G + F E ++ +L L Sbjct: 67 NAYSLSKVT---ISNYFRELTQDLEAVYTGFYFLEFCGYFCQENNDEKDMLKLLYQSLRA 123 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + P+ ++ EL + G G L C+ + L S + GG C + G Sbjct: 124 LESPAYKNELVRAVFELKAITINGEGPLLFSCIHCHSREGLNVFSARRGGVFCDNCGTQV 183 Query: 180 AEK 182 + Sbjct: 184 QGR 186 >gi|116491020|ref|YP_810564.1| DNA replication and repair protein RecO [Oenococcus oeni PSU-1] gi|290890501|ref|ZP_06553576.1| hypothetical protein AWRIB429_0966 [Oenococcus oeni AWRIB429] gi|122276798|sp|Q04F73|RECO_OENOB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116091745|gb|ABJ56899.1| DNA replication and repair protein RecO [Oenococcus oeni PSU-1] gi|290479897|gb|EFD88546.1| hypothetical protein AWRIB429_0966 [Oenococcus oeni AWRIB429] Length = 258 Score = 48.2 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 58/191 (30%), Gaps = 3/191 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M + I++ VR Y E + ++++++ G + R + + ++ Q Sbjct: 1 MVDKISGIVISVRDYSENDSLIKIISPTIGINTYLARGSKKTKSSLKIATQLFTYGDFFG 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + LG S + L L Y L E + Y M Sbjct: 61 KYPKKNGLGYLNSSESTSIFKNISLDIILNAYASHIAELLAAAFDENTNIDQWYFMFFQA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L I E+ LL G +L + G T+ S + G + + Sbjct: 121 LKKIDAGLDPQVIANVFEIQLLSVFGVEPNLFSDPINGQTEGEFDFSEQYNGILSKKNYH 180 Query: 178 PYAEKMLVLPS 188 ++ P Sbjct: 181 LDDRRLHANPK 191 >gi|225012385|ref|ZP_03702821.1| DNA repair protein RecO [Flavobacteria bacterium MS024-2A] gi|225003362|gb|EEG41336.1| DNA repair protein RecO [Flavobacteria bacterium MS024-2A] Length = 241 Score = 48.2 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-----QPILQAGNLVR 55 M +A+ L YG+ ++I T++YG ++ S R + + + L+ Sbjct: 1 MQSSTEALTLTTVKYGDSSLIAACYTKEYGLQSYMLKGILSSRTNKKTPKSLFEPLTLLE 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKL--LSSSLFLYGLQSIVPLFRFLPER-EPCLELYD 112 + LG + E + + + + + E E +LY Sbjct: 61 LEATKNSTDRLGFIK-EAKLHYPYQTIPFDLRKKTLLFFLAEVIQQVIKEEQEANNQLYA 119 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L + +G +++ L L K IGF +++ + ++G Sbjct: 120 FLKKRMLWLDTEENVGLFHIKLMLDLSKFIGFYPNISDKTA-------PYFDLETGC 169 >gi|225018644|ref|ZP_03707836.1| hypothetical protein CLOSTMETH_02594 [Clostridium methylpentosum DSM 5476] gi|224948552|gb|EEG29761.1| hypothetical protein CLOSTMETH_02594 [Clostridium methylpentosum DSM 5476] Length = 263 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 71/212 (33%), Gaps = 37/212 (17%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + +IL RSY + L ++TR G +R Q G + R + Sbjct: 1 MIIKTEGMILSQRSYRDSEKFLTILTRDQGVIEAKLR-----------QFGQIKRSQFN- 48 Query: 61 RLAQNLGEFRFEV--LESH-----------CAKLLSSSLFLYGLQSIVPLFRFL--PERE 105 L LG FRF++ L+ L L L + L P + Sbjct: 49 -LIGPLGYFRFDLFVLKQRYTVDAAEKIEDFFPLRYDVEKLALAGYFCELTQSLASPRED 107 Query: 106 PCLELYDMLNIFLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQD-LLW 162 +Y L + F++ EL L GF DL C + L+ Sbjct: 108 A--WVYLRLLLNTLALLEKDRRSPAFLKAVFELRALSLGGFMPDLVCCKHCCQFEGKKLY 165 Query: 163 VSPKSGGAVCRSV--GLPYAEKM-LVL-PSFL 190 P +G VC G P ++ + L P L Sbjct: 166 FLPFAGTLVCSDCLPGSPENNQLHIPLAPPVL 197 >gi|308271397|emb|CBX28005.1| DNA repair protein recO [uncultured Desulfobacterium sp.] Length = 258 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 66/180 (36%), Gaps = 9/180 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR-SRL 62 AIIL +G+ ++IL + G+ ++ + + IL+ +++R+ ++ Sbjct: 8 PAIILRRVDFGDYDLILTFFSLNKGKISAIAKSAKKSTKRFGGILELFSVLRLVCSTAKG 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + L +++ S Y + + +Y +L L+ Sbjct: 68 RELLVLQEADLINSFSCIRGDLKKTAYASYFAELINEWSETGSEQEGIYRLLYFVLDQLD 127 Query: 123 IPSVIGKIF-VQIELMLLKNIGFGLDLTKCV-----VTGVTQDLLWVSPKSGGAVCRSVG 176 I + +I + ++ +G +L+ C + + +D + GG +C+ Sbjct: 128 ICRIPEEILSIIFQMRFADIVGVRPNLSVCTDCRIEIDRIKEDRVAFDFSKGGIICQKCA 187 >gi|225010218|ref|ZP_03700690.1| DNA repair protein RecO [Flavobacteria bacterium MS024-3C] gi|225005697|gb|EEG43647.1| DNA repair protein RecO [Flavobacteria bacterium MS024-3C] Length = 239 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 13/153 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M AI+L YG+ ++I+++ T G + S + N S Sbjct: 1 MQQTTKAIVLKTIKYGDNSLIVKLYTASSGLKSYMLNGVLSRKKGKF----NKAHFLPLS 56 Query: 61 RLA---QNLGEFRFE-VLESHCAKLLSSSLFLYGLQSIVPLFR-----FLPEREPCLELY 111 +L Q+ + E ++E+ + S+ +IV + E EL+ Sbjct: 57 QLEIVAQHRDKGNLERLIEAKLSYPYQSAHTHMAKNAIVLFLSEFLSNAIQEETENKELF 116 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGF 144 + L I + + + K GF Sbjct: 117 SFIETALQWLDNEDQIANFHLFFLVEISKYFGF 149 >gi|294139711|ref|YP_003555689.1| DNA repair protein RecO [Shewanella violacea DSS12] gi|293326180|dbj|BAJ00911.1| DNA repair protein RecO [Shewanella violacea DSS12] Length = 230 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 7/146 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLA 63 + +L R + + ++++ ++ +GR R G ++ ILQ + R + Sbjct: 2 ERGYVLHTRPFKDSSVLVNMLVDGHGRVDCVARLGSGKTSIKSILQPFQPLIFQLSGRTS 61 Query: 64 -QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +N+ E A LS + G L R + L+ + L Sbjct: 62 LRNMNS--VEA--GSPAIPLSGEISFSGFYLNELLVRCIAVDHGAESLFFTYHKTLMAMA 117 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 EL LLK +G L Sbjct: 118 A-GFCESQLRYFELSLLKELGLMPTL 142 >gi|255037791|ref|YP_003088412.1| DNA repair protein RecO [Dyadobacter fermentans DSM 18053] gi|254950547|gb|ACT95247.1| DNA repair protein RecO [Dyadobacter fermentans DSM 18053] Length = 231 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 11/156 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVR- 55 M I L Y E +II + T +G V +S + + Q L+ Sbjct: 1 MLHTTRGIALSYIRYKESSIIARIYTETFGIQTYIVNGVRSSKSKSNRIAFFQPLTLLDL 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKL---LSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 V + ++ R L+ + GL L + L E E L+ Sbjct: 61 VVYHKNKEDSI--HRISELKCYAPFASIPYDVIKSGLGLFVTEMLGKTLREEENNEPLFH 118 Query: 113 MLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLD 147 + + + F +Q + L +GFG++ Sbjct: 119 FIEQSVLYLDGAEGGYENFHIQFLMQLAHYLGFGVE 154 >gi|158337750|ref|YP_001518926.1| DNA repair protein RecO [Acaryochloris marina MBIC11017] gi|229485521|sp|B0C0B6|RECO_ACAM1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|158307991|gb|ABW29608.1| DNA repair protein RecO [Acaryochloris marina MBIC11017] Length = 293 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 ++ I L +GE + +L ++TR+ G + + + L N + + Sbjct: 5 YKATGINLKSMPFGEADRLLTILTREQGLVRAVAPGCRKPKSKLGGRSALFVVNDLMLV- 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKL-----LSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + R + + E LES+ L++S +L L L +P EL+D+ Sbjct: 64 QGRSLDKI--AQAETLESYPGLSQNLAKLTTSQYLAELTLYQALS-----GQPQTELWDL 116 Query: 114 LNIFLNCHKIPSVI--GKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + ++ + L LL G + C VT Sbjct: 117 FCQQLTQLQNATLAQVPCCLIHGTLKLLAGAGIAPQVHACCVTHQ 161 >gi|86609992|ref|YP_478754.1| DNA repair protein RecO [Synechococcus sp. JA-2-3B'a(2-13)] gi|119361495|sp|Q2JIQ7|RECO_SYNJB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86558534|gb|ABD03491.1| DNA repair protein RecO [Synechococcus sp. JA-2-3B'a(2-13)] Length = 285 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 20/187 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH------RMQPILQAGN---L 53 ++ I L GE + I+ ++TR+ G + + RM+P + N + Sbjct: 6 YRVTGINLKGIPLGEADRIVTILTREQGLIRAVAKGSRKQPSKLGGRMEPFVI--NDLLM 63 Query: 54 VRVNWRSRLAQNLGEFR-FEVLESHCAKLLSSSLF---LYGLQSIVPLFRFLPEREPCLE 109 VR W ++ + R + LS SL + V L LP+ + E Sbjct: 64 VRGRWSAQTETSQRLQRIVQAETLQTFPRLSRSLAHLTAAQYLAEVALLLALPD-QAQEE 122 Query: 110 LYDMLNIFLNCHK---IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSP 165 L+ +L L + + + LL GF + C G ++ SP Sbjct: 123 LFVVLVEHLERIERAASEQAVLPLLTHGLYHLLALAGFAPQVQACYFCQGGLVGSVFFSP 182 Query: 166 KSGGAVC 172 + GG +C Sbjct: 183 QWGGLIC 189 >gi|56750569|ref|YP_171270.1| DNA repair protein RecO [Synechococcus elongatus PCC 6301] gi|81299793|ref|YP_400001.1| DNA repair protein RecO [Synechococcus elongatus PCC 7942] gi|62287376|sp|Q5N4L9|RECO_SYNP6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|123557076|sp|Q31PK5|RECO_SYNE7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56685528|dbj|BAD78750.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168674|gb|ABB57014.1| DNA replication and repair protein RecO [Synechococcus elongatus PCC 7942] Length = 266 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 19/163 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-----PILQAGNLVRVN 57 + AI+L GE + +L +++ G + R + + G+ + Sbjct: 5 YTTTAIVLKATPLGEADRLLTLLSPDQGLLRVVATGARKPRSKLGGRTALFVVGDCLIAC 64 Query: 58 WRS--RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV--PLFRFLPEREPCLELYDM 113 +S RL Q E L SH A L L Q + L + L ER P EL+ + Sbjct: 65 GKSLDRLQQ------VETLTSHTA-LSGDLARLAAAQYLTELVLAQAL-ERHPQPELFAL 116 Query: 114 LNIFLNCHKIPSVIGKI--FVQIELMLLKNIGFGLDLTKCVVT 154 L L + S + + +Q LL G+ C +T Sbjct: 117 LCRDLARIETQSGLEVLPYLLQSTWQLLAWAGWAPQTHYCCLT 159 >gi|222529400|ref|YP_002573282.1| DNA repair protein RecO [Caldicellulosiruptor bescii DSM 6725] gi|254790507|sp|B9MS55|RECO_ANATD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222456247|gb|ACM60509.1| DNA repair protein RecO [Caldicellulosiruptor bescii DSM 6725] Length = 244 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 61/174 (35%), Gaps = 8/174 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL----QAGNLVRVNWRSRL 62 I+L ++ E + IL V+T +G+ +N R+ +L Q R + Sbjct: 8 GIVLKETNFEESSKILTVLTSDFGKIQVLSKN--CRRLLSVLSACSQPLMFCEFVIR-KT 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 V+ES +L +Y I + FL + ++ +L L K Sbjct: 65 KDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSLYLLK 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 + E+ +L GF L T+CV + S K GG C Sbjct: 125 KGKDPEVVSRIFEIKILVYTGFFLQFTQCVKCQRKDITRAFFSFKDGGLTCEKC 178 >gi|312793588|ref|YP_004026511.1| DNA repair protein reco [Caldicellulosiruptor kristjanssonii 177R1B] gi|312875915|ref|ZP_07735905.1| DNA repair protein RecO [Caldicellulosiruptor lactoaceticus 6A] gi|311797396|gb|EFR13735.1| DNA repair protein RecO [Caldicellulosiruptor lactoaceticus 6A] gi|312180728|gb|ADQ40898.1| DNA repair protein RecO [Caldicellulosiruptor kristjanssonii 177R1B] Length = 244 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 62/177 (35%), Gaps = 8/177 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL----QAGNLVRVNWRSRL 62 I+L ++ E + IL V+T +G+ +N R+ +L Q R + Sbjct: 8 GIVLKETNFEESSKILTVLTSDFGKIQVLSKN--CRRLLSVLSAVSQPLMFCEFVIR-KT 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 V+ES +L +Y I + FL + ++ +L L K Sbjct: 65 KDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSLYLLK 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLP 178 + E+ +L GF T+CV + S K+GG C + Sbjct: 125 KGKDPEVVSRIFEIKILVYTGFFPQFTQCVKCQRKDITRAFFSFKNGGLTCEACKED 181 >gi|58337482|ref|YP_194067.1| DNA repair protein [Lactobacillus acidophilus NCFM] gi|227904118|ref|ZP_04021923.1| recombination protein O [Lactobacillus acidophilus ATCC 4796] gi|67460737|sp|Q5FJT8|RECO_LACAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|58254799|gb|AAV43036.1| DNA repair protein [Lactobacillus acidophilus NCFM] gi|227868137|gb|EEJ75558.1| recombination protein O [Lactobacillus acidophilus ATCC 4796] Length = 250 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 10/189 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQ--AGNLVRVNWRS 60 II + Y E +++ +++T+Q G V+ +S L AG V Sbjct: 9 QGIIFKRQKYKEADLLAKIITKQSGIITLIVKGAMRPKSKLSAATLNFSAGTYVIYT--- 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 L R L + I L E +P + Y++ L Sbjct: 66 -SGHGLSNLRTYKKVQQFDALYRDLTKNAYVSFIFDLIDHAFVEYQPLGQYYNLAVFALE 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I +++ +L G +L+ CV+ G + + S K GG +C Sbjct: 125 KISAGVDSEMITQIVQMKMLSAYGVKPELSHCVICGKEKGIFDYSIKLGGVICSDHFNVV 184 Query: 180 AEKMLVLPS 188 ++ + P Sbjct: 185 ESRLHLKPK 193 >gi|295132042|ref|YP_003582718.1| DNA repair protein RecO [Zunongwangia profunda SM-A87] gi|294980057|gb|ADF50522.1| DNA repair protein RecO [Zunongwangia profunda SM-A87] Length = 239 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 11/155 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M AI++ YGE ++I+ + + + G +R + + + + Sbjct: 1 MIVNSKAIVISALKYGEADLIVNLYSLESGLRTYMLRGILKSK-KGKFKVSQFQLLTQLE 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--------EREPCLELYD 112 +A + + E L+ AK++++ L+ L F+ E E LY Sbjct: 60 IVASHKNKGTLEYLKD--AKVINTYTSLHTNMIKTSLVMFIAEVLKSAIREEEANPALYH 117 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L + + + L L +GF D Sbjct: 118 FLETAFSWLDLHDKTANFHIMFLLKLSGFLGFQPD 152 >gi|170077380|ref|YP_001734018.1| DNA repair protein RecO [Synechococcus sp. PCC 7002] gi|169885049|gb|ACA98762.1| DNA repair protein RecO [Synechococcus sp. PCC 7002] Length = 270 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 17/179 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRV 56 M ++ IIL GE + ++ +++ + G + HR + L N + Sbjct: 1 MSFKVTGIILKGSPLGEADRLVTILSPEQGLVKAVAPGARQHRSALRGRTELLVVNEFVL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLN 115 R R + + ++L S+ L L Q + + +L + P ELY++L Sbjct: 61 T-RGRSLDRI--QQADMLTSYSG-LRHDFAKLAVGQYLAEVTHYLAVSQTPQPELYELLR 116 Query: 116 IFLNCHKIPSVIG--------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 L + Q LL GF + C + +V P+ Sbjct: 117 EHLRRIEALEFQPSARVTQIIAHLTQALFHLLAIAGFAPQVQHCQGSQTLISPNFVDPR 175 >gi|323342096|ref|ZP_08082329.1| hypothetical protein HMPREF0357_10509 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464521|gb|EFY09714.1| hypothetical protein HMPREF0357_10509 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 232 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 68/182 (37%), Gaps = 14/182 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN---GQSHRMQPILQAGNLVRVN 57 M +D I+ + + E + ++ + +YG + +S + + L+ + V+ Sbjct: 1 MNNKDVGFIVSIVPFREHDAMVHFLGYEYGLIRMILPGYYRAKSKQGRLGLE-FSKVQYR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKL--LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + ++ R ES A L + +L + + L + + Y Sbjct: 60 FN--FQEHKLN-RIIGGESINAYLQVRQNLDWLMYMSLVSELTVRCFDFDSHHLFYQWFE 116 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + K ++ +++ GF D+ CV+ G T + S + GG VC + Sbjct: 117 NCIESNNLEVHCIK-YLAF---IIQTQGFTPDVEGCVMCGSTNVNAF-SIEHGGYVCATH 171 Query: 176 GL 177 Sbjct: 172 AQ 173 >gi|313884069|ref|ZP_07817835.1| DNA repair protein RecO [Eremococcus coleocola ACS-139-V-Col8] gi|312620516|gb|EFR31939.1| DNA repair protein RecO [Eremococcus coleocola ACS-139-V-Col8] Length = 270 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 14/180 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS------HRMQPILQAGNLV 54 M + + I+L R Y E + +++V T ++G + ++++ + +M P+ Sbjct: 1 MNERFEGIVLFNRPYKEDDALIKVFTDRFGTKMFYLKHVKKPNHPLASQMIPLT------ 54 Query: 55 RVNWRSRLAQNLGEFRFEV--LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 R + + F E L+ + + + +Y + + + P L LY Sbjct: 55 RHEFVGMIHDQGFSFLREGTSLDMYRSNQVDYKKQVYTAYISQLVDAAIDDNVPNLALYQ 114 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 +L L V I +E+ LL G L+ C V Q+ S K G +C Sbjct: 115 LLRGSLEQINQGQVPELITHFVEIHLLPLFGTQLNWQTCQVCDSQQEPADFSIKLQGRLC 174 >gi|308177457|ref|YP_003916863.1| DNA repair protein RecO [Arthrobacter arilaitensis Re117] gi|307744920|emb|CBT75892.1| DNA repair protein RecO [Arthrobacter arilaitensis Re117] Length = 249 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 15/175 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN-WRSRLA 63 ++L GE + I+ ++T Q G + + S RM L+ V R Sbjct: 15 GLVLRTHKLGEADRIITLLTPQ-GIVRAVAKGVRRTSSRMGATLEPFMEVDALMVMGRNL 73 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREP-----CLELYDMLNIF 117 + + + L + +LL Y + ++ + L E E +L+ Sbjct: 74 DIVSQAQ---LRNSYGQLLVMDYPSYTVANAMSEIAEKLLEAESDSTQQQYQLFHGAIAL 130 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L+ ++ S G + L L G+ T CV G V + GG VC Sbjct: 131 LSKQRVDS--GAVLDSYILRALSVAGWAPSFTSCVRCGAPGPHQAVHVQLGGVVC 183 >gi|218777906|ref|YP_002429224.1| DNA repair protein RecO [Desulfatibacillum alkenivorans AK-01] gi|226737860|sp|B8FKE1|RECO_DESAA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218759290|gb|ACL01756.1| DNA repair protein RecO [Desulfatibacillum alkenivorans AK-01] Length = 258 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 5/153 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-RSRLA 63 A+IL YG+ ++I+ T+ G+ +N + R L+ + V + + + Sbjct: 8 AVILRSIEYGDFDLIVTFFTQAQGKRAALAKNARKSFKRFGGALELFSKVSIVYAHGKKK 67 Query: 64 QNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L LE H + + + ++ + E E++ +L L Sbjct: 68 GGLPLLSESNLEQHFSNIRMDIHKTALASLWAETIYSWAEEEHAQEEIFQLLIRSLENLD 127 Query: 123 IPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVT 154 V K+ + L L G L +CV+ Sbjct: 128 NEKVDRDKVNILFLLRFLALAGLSPSLDQCVLC 160 >gi|312130734|ref|YP_003998074.1| DNA repair protein reco [Leadbetterella byssophila DSM 17132] gi|311907280|gb|ADQ17721.1| DNA repair protein RecO [Leadbetterella byssophila DSM 17132] Length = 228 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 9/154 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVR-- 55 M + I+L Y E +II ++ T ++G +S + + + Q NLV Sbjct: 1 MLHKTRGIVLNYIKYRETSIIAKIYTEEFGLQSYVENGVRSPKSKGRIALFQPLNLVDLV 60 Query: 56 VNWRSRLAQN-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 V ++ + + E + G+ L L E L+ L Sbjct: 61 VYFKPQADIQRISEIKC--THPFFNIPTDIRKTTLGIFVGEILVLTLKENAGNPLLFSFL 118 Query: 115 -NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 ++ + + + L +GFG Sbjct: 119 QEALIHLEHQDEGVENFHLYFLMTLSAYLGFGPH 152 >gi|317122969|ref|YP_004102972.1| DNA repair protein RecO [Thermaerobacter marianensis DSM 12885] gi|315592949|gb|ADU52245.1| DNA repair protein RecO [Thermaerobacter marianensis DSM 12885] Length = 303 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 9/161 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRV-NWR 59 + + I+L R YGE++ ++ ++ R+ R + + R + +Q R W+ Sbjct: 4 YTVEGIVLRTREYGERDRLVTLVDREGTRRTVLAKGVRRPRSSLAAGVQPYTYSRFLLWK 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R G + +VL++ S F E P ++ ++ L Sbjct: 64 GRSLD--GVSQVQVLDALTGLRGSLEALAAAAYVAELAEAFTQEGAPSPGVFPVVLQGLR 121 Query: 120 CHKIPSVIGKIFVQI----ELMLLKNIGFGLDLTKCVVTGV 156 G EL LL G G L C G Sbjct: 122 GLAAAPGDGVAHALWLRHAELRLLDLAGLGPQLDACQDCGR 162 >gi|91202469|emb|CAJ72108.1| hypothetical protein kustd1363 [Candidatus Kuenenia stuttgartiensis] Length = 257 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 51/165 (30%), Gaps = 28/165 (16%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + DAI LG Y + + I+ TR YG+ + + + + S+ Sbjct: 5 KTDAITLGRTDYSDSSQIIIFYTRDYGKINTIAKGFKRSSGK------------YNSKAI 52 Query: 64 QNLGEFRF-----EVLESHC----------AKLLSSSLFLYGLQSIVPLFRFLPE-REPC 107 L +R E H + + L E +P Sbjct: 53 DLLTHYRILFIKKEHSTLHTLTDAVLQNNYPAFRHDLDKYFRASCMAELVNEFTEKNDPN 112 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 L+D+ LN + + EL +L +G+ + C+ Sbjct: 113 EPLFDLFLNTLNHIATDTNTTIWLLAFELKMLNILGYLPEWEHCI 157 >gi|294674977|ref|YP_003575593.1| DNA repair protein RecO [Prevotella ruminicola 23] gi|294473236|gb|ADE82625.1| putative DNA repair protein RecO [Prevotella ruminicola 23] Length = 241 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 5/154 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVN 57 M + AI+L YGE +I+++ T+ +GR V + + + Q ++ + Sbjct: 1 MLTKTQAIVLHAIKYGETRLIVDMFTKVFGRQAFIVSIPKTPRGKVKKQFFQPLTILEIE 60 Query: 58 WRSRLAQNL-GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R Q L + + L L+ L + LY+ L Sbjct: 61 TDIRPRQQLQKLHDVRLAAPFASIPFEPDKLAISLFVAEFLYYALRSEQRNELLYEYLEN 120 Query: 117 FLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + F + L L + +GF +L Sbjct: 121 SIVWLDGQQSSFANFHLVFLLRLTRFLGFYPNLD 154 >gi|78187879|ref|YP_375922.1| recombination protein O, RecO [Chlorobium luteolum DSM 273] gi|123582452|sp|Q3B1A2|RECO_PELLD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78167781|gb|ABB24879.1| DNA replication and repair protein RecO [Chlorobium luteolum DSM 273] Length = 264 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 32/175 (18%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVR-VN 57 M + A++L Y +++ IL + TR++GR ++ G++ + + I AGN++ V Sbjct: 1 MIVKTRAVVLREIKYRDQSKILTLYTREFGRLACILKGGRNPKNRLSGIFSAGNVLDIVL 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYG-------------LQSIVPLFRFLPER 104 +R + E +L+S + L I+ L R E Sbjct: 61 YR----------KPE----REVQLISDGSLVSCPMVPGPDIERFGVLYRIIDLVRLTTEH 106 Query: 105 E-PCLELYDMLNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + L+ +L L V + ++ L + GF +L +CV +G Sbjct: 107 DGRSPRLFSLLESTLLELNRERVAYRTLYAWFLLRFISLQGFAPELCRCVFSGRE 161 >gi|332519288|ref|ZP_08395755.1| DNA repair protein RecO [Lacinutrix algicola 5H-3-7-4] gi|332045136|gb|EGI81329.1| DNA repair protein RecO [Lacinutrix algicola 5H-3-7-4] Length = 239 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 5/154 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M +AI+L Y + ++I++ T+++G +R + + Q + + Sbjct: 1 MIATTNAIVLSKLKYKDNDLIVKCYTQEFGIVSYLLRGVLKSKKKGSKVAYYQLLTQLHL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLN 115 + A+ L + + + L ++ L L L L E E LY+ L Sbjct: 61 VTDYKQARGLQYVKEVKINHLYSNLHTNILKSAIVLFLAEVLSTTLQEEEQNATLYNYLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 L + L L K++GF D+T Sbjct: 121 TTLQWLDTNDRYSNFHLLFLLNLTKHLGFYPDIT 154 >gi|28410768|emb|CAD67154.1| DNA repair protein RecO [Tropheryma whipplei TW08/27] Length = 247 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 69/185 (37%), Gaps = 16/185 (8%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRV-NW 58 +++D AI+L + GE + I+ + TR G + + + + L+ ++ + Sbjct: 10 HYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDAFLY 69 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER----EPCLELYDML 114 R G + E+L S+ ++L+ S+ I R L + L+ Sbjct: 70 IGRGMD--GVSQAEILASYGSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAF 127 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLWVSPKSGGAVC 172 + P I ++ L + G+ L C + + + +S +GG VC Sbjct: 128 SALSRGISSPEAICSSYL---LRSMSAAGWRPALENCAKCLLPLVEYTIDIS--AGGLVC 182 Query: 173 RSVGL 177 S Sbjct: 183 TSCSE 187 >gi|154505899|ref|ZP_02042637.1| hypothetical protein RUMGNA_03441 [Ruminococcus gnavus ATCC 29149] gi|153793917|gb|EDN76337.1| hypothetical protein RUMGNA_03441 [Ruminococcus gnavus ATCC 29149] Length = 276 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 67/182 (36%), Gaps = 12/182 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV----NWRSRL 62 ++L GE + + ++T++ G+ F R + P++ A N + R Sbjct: 38 GMVLSTAPVGEYDRRVVILTKEQGKISAFARGAR-RPNSPLVGAVNPFSFGEFTMYEGRS 96 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + + ++ ++L + YG + + E+ E+ +L + Sbjct: 97 SHTIQSVK---ITNYFSELREDMIGAYYGFYFLEFANYYTKEQNDEREMLKLLYQTMKAL 153 Query: 122 KIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + + ++ EL G G + +CV + S + GG VC Sbjct: 154 TSPHI-PNLLIRRIFELKAFCINGEGPQVFQCVRCQKKDGQMVFSAREGGLVCTDCARNI 212 Query: 180 AE 181 ++ Sbjct: 213 SD 214 >gi|139439610|ref|ZP_01773023.1| Hypothetical protein COLAER_02050 [Collinsella aerofaciens ATCC 25986] gi|133774951|gb|EBA38771.1| Hypothetical protein COLAER_02050 [Collinsella aerofaciens ATCC 25986] Length = 249 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 31/186 (16%) Query: 8 IILGVRSYGEKNIILEVMTRQYGR-HLGFVRNGQSHRMQPILQAGNLVRVNWRSR----- 61 ++L E ++IL ++ + GR + + G + +R Sbjct: 12 LVLDKTKLKETDLILTML-DERGRQVRAVAKGARK--------PGGRLA----ARCELFC 58 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLY-------GLQSIVPLFRFLP-EREPCLELYDM 113 L + A+L+ + L +I + R E + + Sbjct: 59 TVDMLLAHGRSLDVVSQAELMEAPLGAAPDYETTCAASAIAEVARVCSFEDAEDPFTFAI 118 Query: 114 LNIFLNCHK---IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + + + LL ++G+ D + CV+ G L + SP++GG Sbjct: 119 TQRALTLVGSGLDSAHMDLLVAAFVFKLLSHVGYRPDFSACVLCGDPM-LSYFSPQAGGL 177 Query: 171 VCRSVG 176 +C S Sbjct: 178 MCGSCA 183 >gi|291522459|emb|CBK80752.1| DNA replication and repair protein RecO [Coprococcus catus GD/7] Length = 250 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 28/186 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +++ + GE + + ++T++ G+ GF R + + GN + + Sbjct: 9 GMVISTMAVGEYDKRVVILTKERGKIHGFARGAK--------RPGNSLMA---AAQPFVF 57 Query: 67 GEFRFEVLESHCAKLLSS--------------SLFLYGLQSIVPLFRFLPEREPCLELYD 112 GEF +LE A +SS YG + + E LE+ Sbjct: 58 GEFM--LLEGRSAYTISSVKVMNYFEEFRKDMDATCYGCYFLEFADYYGRENADDLEMLK 115 Query: 113 MLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 +L + ++ + EL ++ G +C T++L S + G + Sbjct: 116 LLYQTVRALCKKTIAYPLIRCIYELKIMAVNGECPQCFECACCHTTENLSVFSARYRGLL 175 Query: 172 CRSVGL 177 C Sbjct: 176 CEKCAG 181 >gi|257453600|ref|ZP_05618890.1| DNA repair protein RecO [Enhydrobacter aerosaccus SK60] gi|257449058|gb|EEV24011.1| DNA repair protein RecO [Enhydrobacter aerosaccus SK60] Length = 251 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 34/161 (21%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 IL + YGE ++ + + ++G G + P+ ++ + + Sbjct: 8 GYILHQKPYGESRSLVYLFSEEWGVVHGI-----GKKNLPLFVP---IQFFGNGKNS--- 56 Query: 67 GEFRFEVLESHCAKLLSSSLFL------YGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +++L + + L G+ L + LP E E++ L Sbjct: 57 ------LKTFSQSQILQNHITLTGQSLYAGMYLNEILQKLLPVEESFAEIWQAYQQCLAN 110 Query: 121 HKIPSVIGK-----------IFVQIELMLLKNIGFGLDLTK 150 V + E +L + +G+G D K Sbjct: 111 MATLFVEPAQSSHDMIFLKWHLRRFENVLFEQLGYGFDFAK 151 >gi|28476293|gb|AAO44382.1| DNA repair protein [Tropheryma whipplei str. Twist] Length = 261 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 69/185 (37%), Gaps = 16/185 (8%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRV-NW 58 +++D AI+L + GE + I+ + TR G + + + + L+ ++ + Sbjct: 24 HYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDAFLY 83 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER----EPCLELYDML 114 R G + E+L S+ ++L+ S+ I R L + L+ Sbjct: 84 IGRGMD--GVSQAEILASYGSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAF 141 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLWVSPKSGGAVC 172 + P I ++ L + G+ L C + + + +S +GG VC Sbjct: 142 SALSRGISSPEAICSSYL---LRSMSAAGWRPALENCAKCLLPLVEYTIDIS--AGGLVC 196 Query: 173 RSVGL 177 S Sbjct: 197 TSCSE 201 >gi|126662644|ref|ZP_01733643.1| DNA repair protein [Flavobacteria bacterium BAL38] gi|126626023|gb|EAZ96712.1| DNA repair protein [Flavobacteria bacterium BAL38] Length = 237 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 7/171 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M + AI+L + EK++I++ T G FV++ S++ Q ++ + Sbjct: 1 MLVKTKAIVLSSLKFQEKSLIVKCFTESDGLKSYFVQSAYSNKKANQKIAYFQPLTIIEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSL--FLYGLQSIVPLFRFLPEREPCLELYDML 114 + L F+ E+ +H +++ + + L + E E L+ L Sbjct: 61 EANHKNKGTLEHFK-EIRLAHSYYTINTDIVKSTIVIFLSEILHHAIKEEEKNQNLFSFL 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 L + + + L + K +GF D+++ SP Sbjct: 120 ETALLWLDTHDEMANFHLILLLEVTKYLGFYPDVSEMDFNFFDTKEASFSP 170 >gi|325269653|ref|ZP_08136266.1| recombination protein O [Prevotella multiformis DSM 16608] gi|324988021|gb|EGC19991.1| recombination protein O [Prevotella multiformis DSM 16608] Length = 242 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 19/161 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +G+ ++I+++ T Q GR +S + + Q L+ ++ Sbjct: 1 MIQKSKAIVLRSLKFGDTSLIVDMFTEQEGRISFITHVAKSAKGKVKKQFFQPLTLLELS 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLS-------SSLFLYGLQSIVPLFRFLPEREPC-LE 109 + R R + ++L L + ++ E + Sbjct: 61 FDYRQ-------RVTLQRIRDVRILRPYGSIPFDPAKSAVLLFLSEFLSYVTRGEQQNVH 113 Query: 110 LYDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 LY + + F + + L + IGF +L Sbjct: 114 LYHYVQTSMEWLDEAVQGYANFHLVFMMRLSRFIGFFPNLE 154 >gi|186684466|ref|YP_001867662.1| DNA repair protein RecO [Nostoc punctiforme PCC 73102] gi|238691195|sp|B2ITL1|RECO_NOSP7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|186466918|gb|ACC82719.1| DNA repair protein RecO [Nostoc punctiforme PCC 73102] Length = 300 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 18/189 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW---R 59 ++ I L + GE + I+ ++T ++G + H ++G V + Sbjct: 5 YKASGINLKTQVLGESDKIVTILTPEFGLIRAVAPGARKHNSSLGGRSGMFVVNELLIAK 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN---I 116 R + + + AK L L IV L + L E +P ELY++ N Sbjct: 65 GRSLDKITQAQTLKTYPGLAKDLGKLAASQYLAEIV-LSQALSE-QPQEELYELFNEHLH 122 Query: 117 FLNCHKIPSVIG--KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK-------- 166 L + G LL G + C ++G + + P Sbjct: 123 RLEALSNANASGVLAHLAHGVFHLLALAGVTPQVQICCLSGRSLKPDFTEPNWQIGFSVP 182 Query: 167 SGGAVCRSV 175 +GG +C Sbjct: 183 TGGTICLEA 191 >gi|256827189|ref|YP_003151148.1| DNA repair protein RecO [Cryptobacterium curtum DSM 15641] gi|256583332|gb|ACU94466.1| DNA repair protein RecO [Cryptobacterium curtum DSM 15641] Length = 256 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 60/204 (29%), Gaps = 33/204 (16%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + AI+L E + I++ + R R L+ N + +RL Sbjct: 7 HERAIVLHRNRLRESDAIVDALIEDGSRISFVARGA--------LKPSNP----FAARLD 54 Query: 64 ----------QNLGEFRFEVLESHCAKL-LSSSL--FLYGLQSIVPLFRFLPEREPCLEL 110 + G A L S + + L R E P L Sbjct: 55 LFGVCDVMLAPSRGLAIVSEARLAAAHAPLRSDIIRNAAAAPILDALRRCAHEDLPVPRL 114 Query: 111 YDMLNIFLNCHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT------QDLLW 162 + M L+ V+ + L L +GF L C+ G + D + Sbjct: 115 FPMTESILDHLSTCEEIVLCPLTAAYLLKLFALLGFRPSLDTCIDCGQSLLEDNPTDEVR 174 Query: 163 VSPKSGGAVCRSVGLPYAEKMLVL 186 S GGA+C + L L Sbjct: 175 FSYIDGGALCYDCAASHVHVALSL 198 >gi|88797950|ref|ZP_01113537.1| DNA repair protein [Reinekea sp. MED297] gi|88779147|gb|EAR10335.1| DNA repair protein [Reinekea sp. MED297] Length = 227 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 40/143 (27%), Gaps = 12/143 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R GE + + T + G + + W R + Sbjct: 10 HGYLIHHRPVGEHRYLAWLFTAEQGLVRTLATGQVPEKAR---------LAEWSLRTREQ 60 Query: 66 LGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 E R +L + + L LFR P L+ + L P Sbjct: 61 --ESRLRDFRFTAPRLVQTQAACFLTLYVHELLFRLAPVGIGETTLFQSFSACLVHLNYP 118 Query: 125 SVIGKIFVQIELMLLKNIGFGLD 147 E LL+ +G G+D Sbjct: 119 DRQVLALRTFEAELLRALGQGID 141 >gi|298243469|ref|ZP_06967276.1| DNA repair protein RecO [Ktedonobacter racemifer DSM 44963] gi|297556523|gb|EFH90387.1| DNA repair protein RecO [Ktedonobacter racemifer DSM 44963] Length = 276 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 32/211 (15%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + DAIIL GE + +L ++T G+ + + +P+ + + + +SRL Sbjct: 7 YSTDAIILKHSDLGEADRVLTLLTPYKGKIHAVAKGVR----RPVSRKSGHLELLCQSRL 62 Query: 63 AQNLG---EFRFEVLESHCAKLLSSS----LFLYGLQSIVPLFRFLPEREPCLELYDM-- 113 G + S L + + RF+ + ++Y++ Sbjct: 63 YIAQGRNLHIITQAQTSDAFLALRQGDDIWYRTCAIYLAELVDRFVEDDTQHEDVYNLLL 122 Query: 114 -----------------LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L+ + E+ LL IG+ L C Sbjct: 123 LALKTLDEDARKVQQQHLDDSSEPEHERDRSMLLLRYFEIYLLSCIGYEPLLRTCAHCDA 182 Query: 157 TQDLLW--VSPKSGGAVCRSVGLPYAEKMLV 185 + + +P GGA+C + +A+K+ Sbjct: 183 ELEPVVNGFTPSLGGALCPNCSQLWAQKISP 213 >gi|89900540|ref|YP_523011.1| DNA repair protein RecO [Rhodoferax ferrireducens T118] gi|119361477|sp|Q21XM3|RECO_RHOFD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|89345277|gb|ABD69480.1| DNA repair protein RecO [Rhodoferax ferrireducens T118] Length = 251 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 9/136 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L + E ++ILEV TR +GR + + S +PIL L+ V + Sbjct: 9 EPAYVLHRHDWSESSLILEVFTRHHGRIALVAKGVKRPSSSFRPILLPLQLLHVAFGGDA 68 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + E ++ + L GL L L +P L+D+ + Sbjct: 69 EIRI----LKAAEWQGGHVMPTGDALMSGLYLNELLLTLLARDDPHTRLFDVYTQVVQVI 124 Query: 122 --KIPSVIGKIFVQIE 135 V+ E Sbjct: 125 ASGHGEVLQSALRAFE 140 >gi|284928635|ref|YP_003421157.1| DNA replication and repair protein RecO [cyanobacterium UCYN-A] gi|284809094|gb|ADB94799.1| DNA replication and repair protein RecO [cyanobacterium UCYN-A] Length = 278 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 65/167 (38%), Gaps = 26/167 (15%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM------------QPILQA 50 ++ I+L GE + ++ +++ + G + + ++ Q ++ Sbjct: 5 YKTTGIVLKSMPLGEADRLIIILSPEKGLIRAIAPSSRKNKSPLSGRSELFMVNQFLIIK 64 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 G+ + ++ Q R E+++ A+ LS + + + +P EL Sbjct: 65 GHSLDKIAQAETLQFYPGLRKELVKLAAAQYLSE-----------LILKLSIDEQPQEEL 113 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVT 154 Y++LN L + S+ ++ + + + G G + +C +T Sbjct: 114 YELLNEHLRRLEKMSLAENLYGYLAQAIFHFLIVTGIGPQIYQCCLT 160 >gi|150024377|ref|YP_001295203.1| DNA repair protein RecO [Flavobacterium psychrophilum JIP02/86] gi|254790522|sp|A6GWB0|RECO_FLAPJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|149770918|emb|CAL42383.1| DNA repair protein RecO [Flavobacterium psychrophilum JIP02/86] Length = 238 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M + AI++ Y EK++I++ T G FVR+ S + Q ++ + Sbjct: 1 MQIKTKAIVISAIKYQEKSLIVKCFTLSDGLKSYFVRDAFSSKKSNQKIAYFQPLTILEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLN 115 + L F+ + + + + + I + + E E + L Sbjct: 61 EAVHKNKGTLERFKEVKIATPFHSIHYDVIKSTIVIFISEILHHSIHEEEKNEAFFTFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L+ I + + L K +GF D++ Sbjct: 121 TALHWLDNHDQIANFHLILLLETTKYLGFYPDISN 155 >gi|332881941|ref|ZP_08449583.1| DNA repair protein RecO [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680176|gb|EGJ53131.1| DNA repair protein RecO [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 239 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 16/159 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG----RHLGFVRNGQSHRMQPILQAGNLVR- 55 MY + A++L Y + ++I+ TR+YG G ++ +S + Q + Sbjct: 1 MYQKTSALVLSAMKYADNSLIVRCFTREYGGCSYLLKGILKPSKSALKVGLFQPLAQLAL 60 Query: 56 -VNWRSRLAQNLGEFRFEVLESHCAKLLS----SSLFLYGLQSIVPLFRFLPEREPCLEL 110 ++ L + E H L S+ L + P+ P + L Sbjct: 61 VATYK---EGALSYIK-EAKVIHPYSTLHTHPYKSVVTIFLSEVCAQICQ-PD-TPDIPL 114 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 +D L+ L ++ L L + +GF D T Sbjct: 115 FDFLSEQLYRLDTTDYNPHFHLKFLLSLTRLLGFYPDTT 153 >gi|161486576|ref|NP_787413.2| DNA repair protein RecO [Tropheryma whipplei str. Twist] gi|161501890|ref|NP_789416.2| DNA repair protein RecO [Tropheryma whipplei TW08/27] Length = 241 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 69/185 (37%), Gaps = 16/185 (8%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRV-NW 58 +++D AI+L + GE + I+ + TR G + + + + L+ ++ + Sbjct: 4 HYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDAFLY 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER----EPCLELYDML 114 R G + E+L S+ ++L+ S+ I R L + L+ Sbjct: 64 IGRGMD--GVSQAEILASYGSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAF 121 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLWVSPKSGGAVC 172 + P I ++ L + G+ L C + + + +S +GG VC Sbjct: 122 SALSRGISSPEAICSSYL---LRSMSAAGWRPALENCAKCLLPLVEYTIDIS--AGGLVC 176 Query: 173 RSVGL 177 S Sbjct: 177 TSCSE 181 >gi|256383954|gb|ACU78524.1| DNA repair protein RecO [Mycoplasma mycoides subsp. capri str. GM12] gi|256384786|gb|ACU79355.1| DNA repair protein RecO [Mycoplasma mycoides subsp. capri str. GM12] gi|296455960|gb|ADH22195.1| DNA repair protein RecO [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 249 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 8/163 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + N + + Sbjct: 1 MEKTLKGIVLNSFDFQDYDKIITIYSNLYGKISLVCLGVNKIKSKNKYGI-NYLSYSNFE 59 Query: 58 -WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++S+ NL + R E++ S +L+LY I L L E+ LY L Sbjct: 60 IFKSKNKFNLSKLKRSELINSFNHISTDFNLYLYA-NIITSLVLSLDEQIKNYNLYKTLK 118 Query: 116 IFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + ++ P + K+ V LK IG +DL+KC Sbjct: 119 LSISIINNKPDLGLKVCVLFMFYFLKIIGNQIDLSKCGFCNSK 161 >gi|269468622|gb|EEZ80266.1| recombinational DNA repair protein, RecF pathway [uncultured SUP05 cluster bacterium] Length = 207 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 54/128 (42%), Gaps = 7/128 (5%) Query: 23 EVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLL 82 + +T+++G+ + + + +Q + +++ + L ++ L Sbjct: 2 DFLTKEHGKIRLIAKGIRKSKTN--IQMFQCLNISFVGKGE--LKTLTNWEVDDVPRHLK 57 Query: 83 SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQ--IELMLLK 140 S +L + + + R L E++P +EL+++ F+N + ++ E LL Sbjct: 58 SEAL-ILSMYVNELISRLLQEQDPHVELFEIYKKFVNQVGSLKQDSRHWLLRMFENNLLA 116 Query: 141 NIGFGLDL 148 +G+ +D Sbjct: 117 ELGYAVDF 124 >gi|312622366|ref|YP_004023979.1| DNA repair protein reco [Caldicellulosiruptor kronotskyensis 2002] gi|312202833|gb|ADQ46160.1| DNA repair protein RecO [Caldicellulosiruptor kronotskyensis 2002] Length = 244 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 60/174 (34%), Gaps = 8/174 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL----QAGNLVRVNWRSRL 62 I+L ++ E + IL V+T +G+ +N R+ +L Q R + Sbjct: 8 GIVLKETNFEESSKILTVLTSDFGKIQVLSKN--CRRLLSVLSACSQPLMFCEFVIR-KT 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 V+ES +L +Y I + FL + ++ +L L K Sbjct: 65 KDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSLYLLK 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 + E+ +L GF T+CV + S K GG C Sbjct: 125 KGKDPEMVSRIFEIKILVYTGFFPQFTQCVKCQRKDITRAFFSFKYGGLTCEKC 178 >gi|224024597|ref|ZP_03642963.1| hypothetical protein BACCOPRO_01324 [Bacteroides coprophilus DSM 18228] gi|224017819|gb|EEF75831.1| hypothetical protein BACCOPRO_01324 [Bacteroides coprophilus DSM 18228] Length = 252 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 60/182 (32%), Gaps = 19/182 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP---ILQAGNLVRVN 57 M + I+L Y +K+ I+ + T Q GR + +S + + Q +LV Sbjct: 12 MLRKSKGIVLHTVKYSDKSNIVHIYTEQGGRMSFLIPASRSRKSAVNGLLFQPLSLVEFE 71 Query: 58 --WRSRLAQNLGEFRFEVLES--HCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYD 112 R R G +S L L L+R L E L+ Sbjct: 72 ADIRPRS----GLHPIREAKSWQPFQSLPYDPYKSAIALFLAEFLYRALKEEAENAPLFA 127 Query: 113 MLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLL---WV--SPK 166 L + F + + L + +G ++ G DLL +V SP+ Sbjct: 128 YLVHSVLWLDACDTNFANFHLVFLMRLSRFLGLYPNVEGYA-EGDCFDLLNACFVAESPR 186 Query: 167 SG 168 G Sbjct: 187 HG 188 >gi|260591753|ref|ZP_05857211.1| DNA repair protein RecO [Prevotella veroralis F0319] gi|260536037|gb|EEX18654.1| DNA repair protein RecO [Prevotella veroralis F0319] Length = 241 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +GE ++I+++ T Q GR R ++ + + Q L+ + Sbjct: 1 MILKSKAIVLRSMKFGEASLIIDMFTEQEGRISFITRIAKTAKGKIKKQYFQPLTLLELE 60 Query: 58 WRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R +L + +L + + L L+ + L+LY+ + Sbjct: 61 FDYRPRTSLQHIKEVRILYPYASIPFDPIKSAILLFLSEFLYHVTRSEQQNLQLYNYVCT 120 Query: 117 FLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTK 150 L + F + + L + IGF +L Sbjct: 121 SLQWLDGAARSYANFHLVFMMRLSRFIGFFPNLEA 155 >gi|298372573|ref|ZP_06982563.1| DNA repair protein RecO [Bacteroidetes oral taxon 274 str. F0058] gi|298275477|gb|EFI17028.1| DNA repair protein RecO [Bacteroidetes oral taxon 274 str. F0058] Length = 237 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 3/124 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWR 59 M +AI+L +Y + I+ + +RQ G +R + +L+ + V + + Sbjct: 1 MLITTEAIVLNHIAYSDNKRIITLFSRQEGLLSAMLRSGNRKSTKVSLLEPFSTVEIIAK 60 Query: 60 SRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R +L L+ + + L L ++R + E+ LYD L+ + Sbjct: 61 -RGNGSLVYINDISPLKIYKTIPFDAEKRLTTLFMAEVVYRTIREQYRDTSLYDFLDRTI 119 Query: 119 NCHK 122 + Sbjct: 120 SLLD 123 >gi|205374164|ref|ZP_03226964.1| DNA repair protein RecO [Bacillus coahuilensis m4-4] Length = 207 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%) Query: 97 LFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + E +P L+++ L+ + + EL +L G L +C V G Sbjct: 44 LDKGTEELKPNPFLFELYQTILSYIEEGYDADILTNIFELKMLPVFGLQPGLNECAVCGQ 103 Query: 157 TQDLLWVSPKSGGAVCRSVGL 177 T+ S + G VC Sbjct: 104 TEGDFSFSFRENGVVCHRCRE 124 >gi|313204665|ref|YP_004043322.1| DNA repair protein reco [Paludibacter propionicigenes WB4] gi|312443981|gb|ADQ80337.1| DNA repair protein RecO [Paludibacter propionicigenes WB4] Length = 240 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 33/166 (19%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVN 57 M + IIL Y + I+ V T+Q+GR V + +LQ ++V ++ Sbjct: 1 MLSKTTGIILHSIKYTDSASIVTVYTQQFGRVSYMVHGVNKKKSMCRAALLQPLSMVEMD 60 Query: 58 ---------WRS---RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE 105 R R+ F +++ A LS LF+ L + E Sbjct: 61 VFHVPGKDIQRIKDLRMNYQFTGIPFNPVKNSLALFLSE-----------VLFKSLRQTE 109 Query: 106 PCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLL----KNIGFGLD 147 P LY L N + + L+ L + +GF + Sbjct: 110 PDENLYLFLE---NSIQQLDCCEEGIANFHLVFLIKMSRYLGFAPN 152 >gi|298528168|ref|ZP_07015572.1| DNA repair protein RecO [Desulfonatronospira thiodismutans ASO3-1] gi|298511820|gb|EFI35722.1| DNA repair protein RecO [Desulfonatronospira thiodismutans ASO3-1] Length = 237 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 15/183 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + + ++L + E ++ + ++ G GF G R + L + NLV Sbjct: 1 MSFSEKVLVLRTGRFKEHDLWVRFLSPTRGVQTGFAFGGCRSRRRFCGCLDSLNLVLFTI 60 Query: 59 RSRLAQNLGEFRFEV--LESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLN 115 + + L S +L + L + + + + PE + +Y ++ Sbjct: 61 --GYSSGKRYLTLQEGTLVSGFQELKNQRDKLGMAVNCLRFVQKICPEGDDSSRIYPLIL 118 Query: 116 IFLNCHK-IPS--VIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGG 169 L + P + + + + G+ +C V G L + S G Sbjct: 119 EVLEVMENHPDIPIFFPLLFKARAAFIH--GYEPVPAECAVCGLGAENMHLGFFSFSDGR 176 Query: 170 AVC 172 C Sbjct: 177 VFC 179 >gi|220906414|ref|YP_002481725.1| DNA repair protein RecO [Cyanothece sp. PCC 7425] gi|254790518|sp|B8HXS5|RECO_CYAP4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219863025|gb|ACL43364.1| DNA repair protein RecO [Cyanothece sp. PCC 7425] Length = 293 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 13/171 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 ++ I L GE + +L ++TR+YG + R + L N + + Sbjct: 5 YKATGINLKAMPLGESDRLLTILTREYGLIRVVAPGARKPRSSLGGRSGLFVVNELLIAP 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF--RFLPEREPCLELYDMLNI 116 R L + E L S+ A+L L Q + L + L E +P +EL+D+L Sbjct: 65 -GRSLHKLSQA--ETLTSY-ARLSKHLSTLTASQYLAELVIYQALSE-QPQVELFDLLCY 119 Query: 117 FLNCHKI--PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 +L+ + + + + LL+ G + +C +T + P Sbjct: 120 YLSWLEQSPEQEVLAVLSRAVFHLLEWAGIAPQVQQCCLTRRPITPDYTDP 170 >gi|331091566|ref|ZP_08340403.1| DNA repair protein RecO [Lachnospiraceae bacterium 2_1_46FAA] gi|330403731|gb|EGG83285.1| DNA repair protein RecO [Lachnospiraceae bacterium 2_1_46FAA] Length = 260 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 24/188 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV-------RVNWR 59 I+L V GE + + ++T++ GR F + + +P Q G V + Sbjct: 21 GIVLSVTPIGEYDKRVVILTKEKGRISAFAKGAR----RPNSQFGGAVSPFCFGEFTLYE 76 Query: 60 SR-----LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R + ++ + E+ A YG + + E+ ++ +L Sbjct: 77 GRNSYNIMQVHISNYFQELKNDMEATY-------YGFYFMEFAEYYTREQNDETQMLKLL 129 Query: 115 NIFLNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 ++ I EL + G G + +CV G + S + GG +C+ Sbjct: 130 YQTFRALTKKNISNELIRCIYELKAVYINGEGPQVFQCVKCGSADAPVVFSVRQGGIICK 189 Query: 174 SVGLPYAE 181 + + Sbjct: 190 NCINEVKD 197 >gi|254421751|ref|ZP_05035469.1| DNA repair protein RecO [Synechococcus sp. PCC 7335] gi|196189240|gb|EDX84204.1| DNA repair protein RecO [Synechococcus sp. PCC 7335] Length = 368 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 23/187 (12%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG----NLVRVN 57 ++ I L GE + ++ V+T++YG + H+ + ++G N V Sbjct: 5 NYKATGINLKGMPMGEADRLVTVLTKEYGLVRAIAPGARKHKSKLAGRSGLFVVNEVLFV 64 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + L + E + S + +P ELY +L Sbjct: 65 -KGKSLDKLVQA--ETVRSFPGLSKDLAKLTASQYLAEIALALALSEQPQAELYYLL--- 118 Query: 118 LNCHKIPSVIGKIFVQIELM-----LLKNIGFGLDLTKCVV--TGVTQDL------LWVS 164 + V L LL G ++ +C + + + DL + S Sbjct: 119 IEHLGRIESAPTAHVLACLAQATFHLLALAGVAPEVHRCCLSRSPLAIDLSNPDWRVAFS 178 Query: 165 PKSGGAV 171 SGGAV Sbjct: 179 VCSGGAV 185 >gi|197303355|ref|ZP_03168395.1| hypothetical protein RUMLAC_02078 [Ruminococcus lactaris ATCC 29176] gi|197297639|gb|EDY32199.1| hypothetical protein RUMLAC_02078 [Ruminococcus lactaris ATCC 29176] Length = 231 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 26/180 (14%) Query: 16 GEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLE 75 GE + + ++T++ G+ F + + P++ N GEF Sbjct: 2 GEYDRRVVLLTKEQGKVSAFAKGSR-RPNSPLVGVVNPFTF----------GEFTMYEGR 50 Query: 76 S-----------HCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 S + ++L L Y G + + E LE+ +L + Sbjct: 51 SSYTIQSAKVINYFSELREDVLGAYYGFYFLEVANYYAREFNDELEMLKLLYQTMRALTN 110 Query: 124 PSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 P + ++ EL +L G G + +CV G + S GG VC + + Sbjct: 111 PHI-PDALIRCIYELKILTINGQGPQVFQCVNCGNKAETAVFSAGRGGLVCETCAGEVRD 169 >gi|257060399|ref|YP_003138287.1| DNA repair protein RecO [Cyanothece sp. PCC 8802] gi|256590565|gb|ACV01452.1| DNA repair protein RecO [Cyanothece sp. PCC 8802] Length = 273 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 62/190 (32%), Gaps = 26/190 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-----PILQAGNLVRVN 57 ++ IIL GE + ++ +++ ++G V + + + + +L+ Sbjct: 5 YKATGIILKGMPIGEADRLVTILSPEWGLIRAVVPGARKSKSRLRGRSELFVINDLLIAK 64 Query: 58 WR-------SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 R + ++ + E+ + + L+ + + +P EL Sbjct: 65 GRSLDKITQADTLESYPKLSQELGKLAAGQYLAELVLCLAVS-----------EQPQGEL 113 Query: 111 YDMLN---IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 Y++L L + Q LL G G + +C +T T + P+ Sbjct: 114 YELLKEHLRRLEDISSGQSLHSHLAQAVFHLLAIAGIGPQVHRCCLTQETLAANFSDPRW 173 Query: 168 GGAVCRSVGL 177 G Sbjct: 174 RVGFSFEGGG 183 >gi|302874335|ref|YP_003842968.1| DNA repair protein RecO [Clostridium cellulovorans 743B] gi|307689398|ref|ZP_07631844.1| DNA repair protein RecO [Clostridium cellulovorans 743B] gi|302577192|gb|ADL51204.1| DNA repair protein RecO [Clostridium cellulovorans 743B] Length = 235 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 10/152 (6%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNG--QSHRMQPILQAG---NLVRVNWRSRLA 63 +L + E + ++ V T +G+ V+ M P+ +LV +S Sbjct: 1 MLKAQDIKESDKLVTVFTEDFGKMNILVKGANRAKSAMLPLTLQFCFCDLVLFKGKSMYT 60 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 N G V+ES L YG I + L E E ++ L K Sbjct: 61 INEGN----VIESFQNFLEDIDSLAYGSYLIELIDISLSEGEVNQYIFRELITCYYIMKN 116 Query: 124 -PSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 S + I V + LL G G+ L +C V Sbjct: 117 RASSMEAIVVYFQCKLLYYTGHGITLDRCSVC 148 >gi|163787115|ref|ZP_02181562.1| DNA repair protein [Flavobacteriales bacterium ALC-1] gi|159877003|gb|EDP71060.1| DNA repair protein [Flavobacteriales bacterium ALC-1] Length = 239 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 71/174 (40%), Gaps = 14/174 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-QSHRMQP---ILQAGNLVRV 56 M +++I+L Y + ++I++ T+Q G +R +S + Q QA + +++ Sbjct: 1 MLTTNNSIVLSKLKYRDYDLIVKCYTQQRGVVSYILRGVLKSKKGQTKTVYFQALSQLQI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDML 114 + Q+L + EV ++ K L ++++ + + L L E E +L++ + Sbjct: 61 EENYKPNQSLHSIK-EVKLNYIYKSLHTNIYKSAIVLFLSEILSNVLKEEEKNEDLFNYI 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 L + L L + +GF + + + + +SG Sbjct: 120 KTALQYLDSEDNFSNFHLLFLLKLTRYLGFQPE-------NLNDSYPYFNLESG 166 >gi|238854657|ref|ZP_04644987.1| DNA repair protein RecO [Lactobacillus jensenii 269-3] gi|260664400|ref|ZP_05865252.1| DNA repair protein RecO [Lactobacillus jensenii SJ-7A-US] gi|282932952|ref|ZP_06338349.1| DNA repair protein RecO [Lactobacillus jensenii 208-1] gi|313472196|ref|ZP_07812688.1| DNA repair protein RecO [Lactobacillus jensenii 1153] gi|238832447|gb|EEQ24754.1| DNA repair protein RecO [Lactobacillus jensenii 269-3] gi|239529576|gb|EEQ68577.1| DNA repair protein RecO [Lactobacillus jensenii 1153] gi|260561465|gb|EEX27437.1| DNA repair protein RecO [Lactobacillus jensenii SJ-7A-US] gi|281302987|gb|EFA95192.1| DNA repair protein RecO [Lactobacillus jensenii 208-1] Length = 251 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 10/174 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR---LA 63 I+ + Y E +++ +++++ G VR ++P + V + L Sbjct: 10 GIVFKRQRYKEADVLAKIISKDMGIFTMLVRGA----LRPKSKLSASVLAFSFGKYQVLT 65 Query: 64 QNLGEFRFEV---LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 G + ++ +L Y L E + Y ++ + L+ Sbjct: 66 SQKGLSTLKTYKDVKQFTNLYSDLTLNSYACYLCDLLDHAFIEYQSLGNFYKLILVALDK 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 I +EL +L G L +C + G T S +GG +C+ Sbjct: 126 LNAGVDPEIICQLVELQMLAVYGVRPQLKQCAICGETHGPFDYSISAGGIICQK 179 >gi|282878005|ref|ZP_06286813.1| DNA repair protein RecO [Prevotella buccalis ATCC 35310] gi|281299840|gb|EFA92201.1| DNA repair protein RecO [Prevotella buccalis ATCC 35310] Length = 241 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 13/159 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR---NGQSHRMQPILQAGNLVRVN 57 M + AI+L YG+ +I ++ T+ G R +P Q ++ + Sbjct: 1 MLVKTQAIVLRTIKYGDSQLITDLFTQAMGNVSFIQRMRTGKGGRVGKPYFQPLTILDIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFL--PEREPCL--ELYD 112 + R + L + E A S+ Y L + L FL R LY Sbjct: 61 FDERPNKQLQRIK----EMRLAYPFSTIPFNSYKLSISLFLSEFLYFSVRGEHEVGALYQ 116 Query: 113 MLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTK 150 + + F + + L + IGF +L Sbjct: 117 YVENSIRWLDSAEGAFANFHLVFMMHLTRFIGFYPNLEN 155 >gi|227529167|ref|ZP_03959216.1| recombination protein O [Lactobacillus vaginalis ATCC 49540] gi|227350892|gb|EEJ41183.1| recombination protein O [Lactobacillus vaginalis ATCC 49540] Length = 256 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 6/181 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 II+ R Y E++++++++T + G + FV+ + R+ + + L Sbjct: 10 GIIMFRRDYRERDLLVKILTDKIGPAMFFVKGAKKRGFRLAADILP--FTHGEYIGSLTD 67 Query: 65 NLGEF--RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 N F + + S Y + + + + ++ + L+ Sbjct: 68 NGLSFINTASDTSQYRSIASDISKNAYATYILALVDSAFQDGQGIGGWFNQVAAALDLIN 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I IE LL G +CV+ G L S + GG +CR+ + Sbjct: 128 SGLDEQVIANVIETQLLVRFGVAPTWDRCVICGRDDLPLDFSEQYGGMLCRNHWHLDERR 187 Query: 183 M 183 + Sbjct: 188 L 188 >gi|218132941|ref|ZP_03461745.1| hypothetical protein BACPEC_00802 [Bacteroides pectinophilus ATCC 43243] gi|217991814|gb|EEC57818.1| hypothetical protein BACPEC_00802 [Bacteroides pectinophilus ATCC 43243] Length = 258 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 62/180 (34%), Gaps = 16/180 (8%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 ++L GE + + ++T++ G+ F + + + + + Q + Sbjct: 7 ASGMVLSSMPVGEFDRRIVLLTKERGKIAAFAKGARRMNSPLMGVTQPFAF------GKF 60 Query: 63 AQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLP----EREPCLELYDMLNIF 117 G +++ + + + S L + E ++ ++L + Sbjct: 61 ELYEGRTSYDIRRADISNYFTEVSSDLDAICYACYFAELADYYGRENLDASQILNLLYMT 120 Query: 118 LNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L ++ ++ E+ L+ G ++ +C ++ L + S G VC S Sbjct: 121 LRALANDNI-PDELIRYIYEIKLISINGECPNMFECAECRKSEGLHYFSMSRFGIVCDSC 179 >gi|313159033|gb|EFR58408.1| DNA repair protein RecO family protein [Alistipes sp. HGB5] Length = 242 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 52/151 (34%), Gaps = 11/151 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRVNW 58 ++ ++L YG+ ++++ ++T GR V+ +S + + Q V Sbjct: 4 YKGRGVVLHTLKYGDSSMVVYLLTDAGGRRSYMVQGVRSRNGRGSKLALFQPMFPVEFEG 63 Query: 59 RSRLAQNLGEFRFEVLESHC---AKLLSSSLFLYGLQSIVPLFRFLPE-REPCLELYDML 114 Q + RF+ + + L L+R + E EP L+D + Sbjct: 64 LESPRQQM--HRFKEVRGGFVLQSLPFDVRKSTMALFMAEVLYRLVREYDEPNEALFDFV 121 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLL-KNIGF 144 + F L L + +GF Sbjct: 122 WNCVGALDSMDEGVANFHLWFLANLSRFLGF 152 >gi|323697786|ref|ZP_08109698.1| DNA repair protein RecO [Desulfovibrio sp. ND132] gi|323457718|gb|EGB13583.1| DNA repair protein RecO [Desulfovibrio desulfuricans ND132] Length = 252 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 14/165 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNW 58 M + A++L + E ++ + ++T G GF G R + + L + V Sbjct: 1 MSATEKALVLKTGRFREADVWVRLLTPSRGIFNGFAFGGSRSRRRFVGCLDPLSHVLFTI 60 Query: 59 RSR-------LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 + L + F + A+ L + ++ + + + +P +L Sbjct: 61 GTNKTGAYTVLEEGTLLHNFPEVRKDPART---GLAVNCVKFVEAVEIDPSDAKPAYDLL 117 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L S + L ++GF D +C V G Sbjct: 118 LETLHMLEAGGGSSDFTPWLFRARLAF--DLGFTPDFLRCGVCGR 160 >gi|317153440|ref|YP_004121488.1| DNA repair protein RecO [Desulfovibrio aespoeensis Aspo-2] gi|316943691|gb|ADU62742.1| DNA repair protein RecO [Desulfovibrio aespoeensis Aspo-2] Length = 252 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 14/165 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVN- 57 M + A++L V + E + +++ T G F G R + + L +LV + Sbjct: 1 MNATEKALVLKVGCFRESDCWVKLFTPSRGIFNAFAFGGARSRRRFVGCLDPLSLVLFSI 60 Query: 58 WRSR------LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 R L++ F + + L ++ + + + P +L Sbjct: 61 GSDRRGSYAVLSEGSLLHNFSGIRADAVAT---GLAANCIRFVEAVDIDPSDAAPVHDLL 117 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L+ + F + +G+ D T C G Sbjct: 118 LKTLYMLDAGHGSADFVPWFFRARFAF--EMGYNPDFTACGTCGE 160 >gi|161344755|ref|NP_442000.2| DNA repair protein RecO [Synechocystis sp. PCC 6803] gi|119370514|sp|Q55569|RECO_SYNY3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 271 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 18/180 (10%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ----SHRMQPILQAGNLVRVNWRSRL 62 I++ ++GE + ++ + + +YG + S R + L N + + + Sbjct: 9 GIVVKGMAFGESDRLVTIFSPEYGLIRAIAPGARKPKSSLRGRTELFVVNQ-FLLFAGKS 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + E S+ + G I + E LY++ L + Sbjct: 68 LDRINQA--ETQYSYPGLGQNVCNLAAGQYLIELILALGTEASAQTSLYELFTEHLRRLE 125 Query: 123 IPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLW--------VSPKSGGAV 171 + + I+ + L + G C +T T + SP+ GG V Sbjct: 126 TEATVENIYGHLAQALFHCLGAEGIAPQFHHCAITAQTISPNFYDRQWRVGFSPELGGIV 185 >gi|309790752|ref|ZP_07685300.1| DNA repair protein RecO [Oscillochloris trichoides DG6] gi|308227202|gb|EFO80882.1| DNA repair protein RecO [Oscillochloris trichoides DG6] Length = 251 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 10/176 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++ +A+IL E + +L + T G+ + + S R+ ++ + Sbjct: 6 YRTEALILRRSDMAEADRLLLIATPN-GKVRVVAKGVRKISSRLAGHIELFTHASLLLA- 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 + +NL + L + L + L+ L E E ++ +L Sbjct: 64 -VGRNLDIVTQSQAINTFTTLRNDITRLSCAYYVADLYATLTEEGEENRPIFQLLVETFA 122 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVC 172 + S+ + ++ EL LL+ G+ L C G T+D SP GG +C Sbjct: 123 ALDL-SINPDLILRSFELRLLQIAGYRPHLHHCAQCGTLLTEDANRFSPLIGGVLC 177 >gi|332706215|ref|ZP_08426284.1| DNA replication and repair protein RecO [Lyngbya majuscula 3L] gi|332355052|gb|EGJ34523.1| DNA replication and repair protein RecO [Lyngbya majuscula 3L] Length = 321 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 21/191 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 ++ I L GE + ++ ++TR+ G + + + L N + + Sbjct: 5 YKATGINLKSIPLGEADRLVTILTRELGLIRVVAPGARKQKSKLGGRSGLFVVNQLLLA- 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV--PLFRFLPEREPCLELYDMLNI 116 + R + + E ES+ L L Q + L L E +P ELY++LN Sbjct: 64 KGRSLDKI--IQAETTESYPG-LSQELSKLAASQYLAELVLCHALSE-QPQEELYELLNE 119 Query: 117 FLNCHKI----------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 L + S++ LL G + C +T T P Sbjct: 120 HLRRLEQLPKITANPSGLSLVLAHLSHGVFHLLALAGIAPQVQLCCITQHTLSPDLTDPN 179 Query: 167 SGGAVCRSVGL 177 G Sbjct: 180 WRVGFSVEAGG 190 >gi|189462929|ref|ZP_03011714.1| hypothetical protein BACCOP_03630 [Bacteroides coprocola DSM 17136] gi|189430356|gb|EDU99340.1| hypothetical protein BACCOP_03630 [Bacteroides coprocola DSM 17136] Length = 240 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 21/147 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN--WRSR 61 I+L Y +K I+ V T Q GR + +S + Q + Q ++V R R Sbjct: 7 GIVLHTVKYSDKANIVHVYTEQSGRMSFLIPAQRSRKSAVKQVLFQPLSVVEFEADMRPR 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLF------LYGLQSIVPLFRFLPEREPCLELYDMLN 115 + ++ A + +SL + L+R L E + L+ L Sbjct: 67 SGIH-------PIKEAKAWYVFTSLPYDPYKSAIAMFLAEFLYRALKEETTNIPLFAYLV 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI 142 + V F L+ L + Sbjct: 120 H---SVQWLDVCETSFANFHLVFLMRL 143 >gi|172039459|ref|YP_001805960.1| DNA repair protein RecO [Cyanothece sp. ATCC 51142] gi|171700913|gb|ACB53894.1| putative recombination protein O [Cyanothece sp. ATCC 51142] Length = 282 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 10/159 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 +Q I+L + E + ++ +++ +YG V + + + L N + + Sbjct: 9 YQTTGIVLKGMPFQEADRLVTLLSPEYGLIRAIVPGARKQKSKLRGRCELFVINELLIA- 67 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + R + + E LES+ + +P LELY++LN L Sbjct: 68 KGRSLDKI--TQAETLESYPGLSKDLGKLAAAQYLAELALNLALDDQPQLELYELLNEHL 125 Query: 119 NCHKIPSVIGKIFVQIELM---LLKNIGFGLDLTKCVVT 154 + SV ++ + LL G G + C +T Sbjct: 126 RRLEKMSVAESLYGYLAQAVFHLLAIAGIGPQVHCCCLT 164 >gi|307566036|ref|ZP_07628494.1| DNA repair protein RecO [Prevotella amnii CRIS 21A-A] gi|307345224|gb|EFN90603.1| DNA repair protein RecO [Prevotella amnii CRIS 21A-A] Length = 241 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 7/63 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP-----ILQAGNLVR 55 M + AI+L YG+ ++I++++T + GR V+ S M+ Q L+ Sbjct: 1 MLRKSKAIVLHTIKYGDSSLIIDLLTEEEGRLTFIVK--LSKTMKGKMKKQYFQPMTLLD 58 Query: 56 VNW 58 + + Sbjct: 59 IEF 61 >gi|257065849|ref|YP_003152105.1| DNA repair protein RecO [Anaerococcus prevotii DSM 20548] gi|256797729|gb|ACV28384.1| DNA repair protein RecO [Anaerococcus prevotii DSM 20548] Length = 255 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 24/182 (13%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR-LAQN 65 IL SY E + I+EV T + GR R + +L + R + N Sbjct: 11 GFILREFSYKETSKIIEVFTDKVGRISIMARGVY-RKNSGLL--------SLTGRFMKVN 61 Query: 66 LGEFRFE----------VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 L ++ + ++ES+ + + LY L + + + ++ +L+ Sbjct: 62 LSLYKMKGDFYGIRDGYLVESYKKSAKNFDIILYKSAMCDFLLKTIDTNQK-DTVFKLLD 120 Query: 116 IFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL--WVSPKSGGAVC 172 + IF+ + + G + + C + G D + S + +C Sbjct: 121 TSFRALEDADYGYLNIFLGFLIKYISFSGLKPNFSTCGICGRIIDKATGYFSIREASLIC 180 Query: 173 RS 174 Sbjct: 181 EE 182 >gi|67925437|ref|ZP_00518781.1| Recombination protein O, RecO [Crocosphaera watsonii WH 8501] gi|67852716|gb|EAM48131.1| Recombination protein O, RecO [Crocosphaera watsonii WH 8501] Length = 278 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 12/171 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 +Q IIL + E + ++ +++ YG V + + + L N + + Sbjct: 5 YQTTGIILKGIPFQEADRLVTLLSPDYGLIRAIVPGARKQKSRLRGRSELFVINELLIA- 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIF 117 + R + + LES+ L L Q + L L + P +E+Y++ N Sbjct: 64 KGRSLDKITQANT--LESYPG-LSKDLGKLAAAQYLAELVLNLALDDLPQVEVYELFNEH 120 Query: 118 LNCHKIPSVIGKIFVQIELM---LLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 L + S+ ++ + LL G G + +C VT + + P Sbjct: 121 LRRLEKMSLAESLYGYLAQAVFHLLAIAGIGPQVHRCCVTQEELNPNFHDP 171 >gi|325068603|ref|ZP_08127276.1| DNA replication and repair protein RecO [Actinomyces oris K20] Length = 249 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 20/187 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AIIL GE + I+ ++TR +G+ + + + R L+ ++ V + Sbjct: 6 YRDEAIILRTYKLGEADRIIVMLTRHHGQVRAVAKGVRRTTSRFGARLEPFSMTDVQLHA 65 Query: 61 -RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER----------EPCLE 109 R + E+++ +++S+ Y + + ER E + Sbjct: 66 GRTLD--VVTQAEIID-PFGRVVSAD---YAMFTCASTMVETAERLSADDGDLGTEASPQ 119 Query: 110 LYDMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 Y +L L + + L L G+ C + G ++G Sbjct: 120 QYLLLAGALAAMSHRRHAPGLILDSYLLRALALGGWAPSCYDCALCGAPGPHRAFHIQAG 179 Query: 169 GAVCRSV 175 GAVC S Sbjct: 180 GAVCESC 186 >gi|220904187|ref|YP_002479499.1| DNA repair protein RecO [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868486|gb|ACL48821.1| DNA repair protein RecO [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 250 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 18/166 (10%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 W D A++L + + E ++ L+ + R++G F G R + L N + R Sbjct: 3 EWADHALVLRMGHFRESDLWLKTLCRKHGLLTLFAFGGSRSRRRFCGCLDVLNSLHC--R 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFL------YGLQSIVP-LFRFLPEREPCL-ELY 111 + + G E A LL L GL + L + E + Sbjct: 61 VKTSPRGGFLNLEE-----AVLLGGPQALRQDWRRMGLAANCLRFVEALGVNDDGADEAF 115 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGV 156 ++ + + +F + L L +GF L C + G Sbjct: 116 ALVEDMRRTLEEAPALPALFPLFFRLRLAGALGFAPSLDVCGLCGA 161 >gi|300866448|ref|ZP_07111140.1| DNA repair protein recO [Oscillatoria sp. PCC 6506] gi|300335552|emb|CBN56300.1| DNA repair protein recO [Oscillatoria sp. PCC 6506] Length = 306 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 15/174 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 ++ I L GE + +L ++TR++G + R + L N + + Sbjct: 5 YKATGINLKSMPMGEHDRLLTILTREFGLIRAVAPGVRKQRSHLGGRSELFVVNELLLA- 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIF 117 + R + + E +ES+ G L + L E +P EL+ +LN Sbjct: 64 KGRSLDKI--TQAETIESYSGLSRDLGKLASGQYLAELVLTQALSE-QPQEELFSLLNEH 120 Query: 118 LNCHK------IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 L+ + + LL G + C +T + + P Sbjct: 121 LSRLERLPRKTDSKTVVAHLAHGIFHLLALGGIAPQVQVCGITQRPLNPNFTDP 174 >gi|291544278|emb|CBL17387.1| DNA repair protein RecO [Ruminococcus sp. 18P13] Length = 252 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 59/197 (29%), Gaps = 31/197 (15%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M I++ RS GE++ ++++T G VR + R Q + Sbjct: 1 MLTTVTGIVIRERSVGEQDKFIDLLTADQGVLEVSVRGAKKITSRHGAASQLYAYGQYCL 60 Query: 59 RSRLAQ-NLGEFRFE---------VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL 108 SR + L + E + A S L G + Sbjct: 61 DSRRDRYYLNSAQVERIFYDLRQDLTRLSLATYFSE---LIGFAVGAEHAKS-------- 109 Query: 109 ELYDMLNIFLNCHKIPSV----IGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWV 163 D+L + LN + + EL L +G D+ C V G L Sbjct: 110 ---DILRLLLNTLHYLEEGSRPVPLLKALFELRFLTELGMMPDIVCCDVCGEYAPAQLIF 166 Query: 164 SPKSGGAVCRSVGLPYA 180 ++G +C A Sbjct: 167 RLQAGNFICAHCAGEIA 183 >gi|325478390|gb|EGC81505.1| DNA repair protein RecO [Anaerococcus prevotii ACS-065-V-Col13] Length = 255 Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 66/195 (33%), Gaps = 28/195 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR-LAQN 65 +L Y E + I+EV T ++GR + N ++ +R + N Sbjct: 11 GFVLREFKYKESSKIVEVFTEKFGRISIIAKGVLKK---------NAKNLSLTARFMKVN 61 Query: 66 LGEFR----------FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 L ++ +LE++ S + LY L R + E + +Y +L+ Sbjct: 62 LSLYKSGKDFYGIKEGRLLETYKKSNKSFDIILYKSAMCDLLLRTIDETQIQ-TVYTLLD 120 Query: 116 IFLNCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVT----GVTQDLLWVSPKSGGA 170 + + IF+ + + G + + C + G + S + Sbjct: 121 NSFHAFEKARGNYINIFLAFLIKYISFSGLKPNFSTCGICGKIIGRRDG--YFSIEEASM 178 Query: 171 VCRSVGLPYAEKMLV 185 +C +K+ + Sbjct: 179 ICDDDMAKVGDKLYL 193 >gi|326773537|ref|ZP_08232820.1| DNA repair protein RecO [Actinomyces viscosus C505] gi|326636767|gb|EGE37670.1| DNA repair protein RecO [Actinomyces viscosus C505] Length = 249 Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 20/187 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AIIL GE + I+ ++TR +G+ + + + R L+ ++ V + Sbjct: 6 YRDEAIILRTYKLGEADRIIVMLTRHHGQVRAVAKGVRRTTSRFGARLEPFSMTDVQLHA 65 Query: 61 -RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER----------EPCLE 109 R + E+++ +++S+ Y + + ER E + Sbjct: 66 GRTLD--VVTQAEIID-PFGRVVSAD---YAMFTCASTMVETAERLSADDGDLGTEASPQ 119 Query: 110 LYDMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 Y +L L + + L L G+ C + G ++G Sbjct: 120 QYLLLAGALAAMSHRRHAPGLILDSYLLRALALGGWAPSCYDCALCGAPGPHRAFHIQAG 179 Query: 169 GAVCRSV 175 GAVC S Sbjct: 180 GAVCESC 186 >gi|325299171|ref|YP_004259088.1| DNA repair protein recO [Bacteroides salanitronis DSM 18170] gi|324318724|gb|ADY36615.1| DNA repair protein recO [Bacteroides salanitronis DSM 18170] Length = 240 Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 52/148 (35%), Gaps = 11/148 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVN 57 M + I+L Y +++ I V T Q GR + +S + Q + Q +LV + Sbjct: 1 MLQKHRGIVLHTLKYNDRSNIAHVYTEQGGRMSFLIPAQRSRKSMVRQVLFQPLSLVEFD 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLL--SSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + + + G E H + L L L+R L E L L+ L Sbjct: 61 --AEVRPHAGLHPVREAKAWHVFQSLPYDPYKSAIALFLAEFLYRALKEEAANLPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNI 142 + GK F L+ L + Sbjct: 119 VH---SVQWLDACGKSFANFHLVFLMRL 143 >gi|148652188|ref|YP_001279281.1| DNA repair protein RecO [Psychrobacter sp. PRwf-1] gi|148571272|gb|ABQ93331.1| DNA repair protein RecO [Psychrobacter sp. PRwf-1] Length = 235 Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 16/168 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A L R + EK I ++T+++G G + G P + + + L Sbjct: 7 QAYSLHQRPFQEKRSIYYLLTKEHGVLHGVAKKGI-----PQFVP-LTLFASGKKSLKT- 59 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK--- 122 + + ES + + + I + LP + +Y+ + + + Sbjct: 60 --LQQVHIAESVPSLMGQQQYAALYVNEIT--LKLLPVEDSVPIIYEQYSQTMRQLQGVL 115 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTK-CVVTGVTQDLLW-VSPKSG 168 + + E +L +GF +DL + C + + L+ +P G Sbjct: 116 SRDDLKMVLRAYEQVLFNELGFAIDLDQDCDQYPIEAEPLYRFAPDRG 163 >gi|116327965|ref|YP_797685.1| recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330846|ref|YP_800564.1| recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120709|gb|ABJ78752.1| Recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124535|gb|ABJ75806.1| Recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 260 Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 64/157 (40%), Gaps = 14/157 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGF-VRNGQSHRMQPI--LQAGNLVRVNW-RSRL 62 I+L R+ E + ++ ++ + G+ F VR + + +PI ++ G+L +++ S+ Sbjct: 14 GIVLESRTIQEGDALIRLL-PEIGQVENFRVRGIRKSKTRPIASVEPGSLSDLDYYHSKN 72 Query: 63 AQNLGEFRFEVLES--HCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 + + + + K S + +V L P+ + +L+ L Sbjct: 73 KE---TYNVKEISLINRFDKAKSGYFAAVLVSYLVELVSSFTPDGAEHPGEFRLLSGALE 129 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + G I +L LL + GF L+K +V Sbjct: 130 ELEKNGPSGLILPFFKLRLLVSGGF---LSKELVCHS 163 >gi|167764150|ref|ZP_02436277.1| hypothetical protein BACSTE_02534 [Bacteroides stercoris ATCC 43183] gi|167698266|gb|EDS14845.1| hypothetical protein BACSTE_02534 [Bacteroides stercoris ATCC 43183] Length = 242 Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 67/204 (32%), Gaps = 22/204 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q +LV + Sbjct: 1 MLQKTQGIVLHSLKYKDTSIIVDIYTEVSGRASFLVPVSRSRKAAVKSVLFQPLSLVELE 60 Query: 58 WRSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + N ++ + +S + L L+R L E L+ L Sbjct: 61 --ADFRPNTSIYKVKEAKSFYPFTSIPYDPYKSAIALFLSEFLYRALREEAENRPLFAYL 118 Query: 115 NIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGL-----------DLTKCVVTGVTQDLL- 161 + S + + L + +G DL T + L Sbjct: 119 QHSIVWLDECGSGFANFHLVFLMRLSRFLGLYPNLEDYHGGDYFDLQNACFTPLRPQLHS 178 Query: 162 -WVSPKSGGAVCRSVGLPYAEKML 184 +++P+ + R + + Y L Sbjct: 179 DYIAPEEAARLTRLMRMNYETMHL 202 >gi|121609301|ref|YP_997108.1| DNA repair protein RecO [Verminephrobacter eiseniae EF01-2] gi|171769489|sp|A1WKD3|RECO_VEREI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|121553941|gb|ABM58090.1| DNA repair protein RecO [Verminephrobacter eiseniae EF01-2] Length = 254 Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 5/136 (3%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L + E ++ILEV R GR + + S +P+L + +++ Sbjct: 10 EPAFVLHSYDWSESSLILEVFCRHQGRVALVAKGAKKPSSNFRPVLLPLQPLWLSYALAA 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 N + E ++ + L GL L R L +P L+D + Sbjct: 70 DGNADIHTLKGAEWVGGHVMPTGDALLSGLYLNELLLRLLARSDPHAALFDAYTGVVRVL 129 Query: 122 --KIPSVIGKIFVQIE 135 + + + E Sbjct: 130 ASEHGDALEPVLRSFE 145 >gi|212692801|ref|ZP_03300929.1| hypothetical protein BACDOR_02300 [Bacteroides dorei DSM 17855] gi|237709489|ref|ZP_04539970.1| DNA repair protein [Bacteroides sp. 9_1_42FAA] gi|237724915|ref|ZP_04555396.1| DNA repair protein [Bacteroides sp. D4] gi|265754696|ref|ZP_06089748.1| DNA repair protein RecO [Bacteroides sp. 3_1_33FAA] gi|212664590|gb|EEB25162.1| hypothetical protein BACDOR_02300 [Bacteroides dorei DSM 17855] gi|229436653|gb|EEO46730.1| DNA repair protein [Bacteroides dorei 5_1_36/D4] gi|229456545|gb|EEO62266.1| DNA repair protein [Bacteroides sp. 9_1_42FAA] gi|263234810|gb|EEZ20378.1| DNA repair protein RecO [Bacteroides sp. 3_1_33FAA] Length = 241 Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 11/145 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + + I+++ TR+ GR V +S + + Q +++ Sbjct: 1 MLQKTVGIVLHTLKYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLES-HCAKLL--SSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R NL +R + +S H + L + L+R L E L+ L Sbjct: 61 ADYRPMSNL--YRIKEAKSWHPFRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLL 139 + + F L+ L Sbjct: 119 EHSIRWLDE---CDRSFSNFHLVFL 140 >gi|42560998|ref|NP_975449.1| DNA repair protein recO [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81618847|sp|Q6MTE5|RECO_MYCMS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|42492495|emb|CAE77091.1| DNA repair protein recO [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321287|gb|ADK69930.1| DNA repair protein RecO [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 249 Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 8/163 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + N + + Sbjct: 1 MEKTLKGIVLNSFDFQDYDKIITIYSNLYGKISLVCLGVNKIKSKNKYGI-NYLSYSNFE 59 Query: 58 -WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++S+ NL + R E++ S +L+LY I L L E+ LY L Sbjct: 60 IFKSKNKFNLSKLKRSELINSFNHISTDFNLYLYA-NIITSLVLSLDEQIKNYNLYKTLK 118 Query: 116 IFLNCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + ++ S G K+ V LK IG +DL+KC Sbjct: 119 LSISIINNKSDFGLKVCVLFMFYFLKIIGNQIDLSKCGFCNSK 161 >gi|282899614|ref|ZP_06307578.1| Recombination protein O, RecO [Cylindrospermopsis raciborskii CS-505] gi|281195493|gb|EFA70426.1| Recombination protein O, RecO [Cylindrospermopsis raciborskii CS-505] Length = 298 Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 19/168 (11%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL--QAG----NLVRV 56 + I L + GE + IL V+TR+ G S + Q L ++G N + + Sbjct: 5 YHVRGINLKSQFLGESDKILTVLTRELGLIKAIAPG--SRKYQSSLNGRSGIFTVNELLI 62 Query: 57 NWRSRLAQNLG-EFRF-EVLESHCAKLLSSSL-FLYGLQSIV--PLFRFLPEREPCLELY 111 + ++ + L+ SL L Q + L + L E +ELY Sbjct: 63 SLGKSNPTQTSNLYKINQAQTLKTYPGLTKSLGKLAASQYLAEIALHQAL-EEHTQVELY 121 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELM-----LLKNIGFGLDLTKCVVT 154 D+LN L+ I +I + L +LK G + C +T Sbjct: 122 DLLNQHLDTLDSLPPIPQIAIVAHLAKGVFDMLKLAGISPQIQVCCLT 169 >gi|218248277|ref|YP_002373648.1| DNA repair protein RecO [Cyanothece sp. PCC 8801] gi|226737859|sp|B7K1F0|RECO_CYAP8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218168755|gb|ACK67492.1| DNA repair protein RecO [Cyanothece sp. PCC 8801] Length = 273 Score = 45.1 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 62/190 (32%), Gaps = 26/190 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-----PILQAGNLVRVN 57 ++ IIL GE + ++ +++ ++G V + + + + +L+ Sbjct: 5 YKATGIILKGMPIGEADRLVTILSPEWGLIRAVVPGARKSKSRLRGRSELFVINDLLIAK 64 Query: 58 WR-------SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 R + ++ + E+ + + L+ + + +P EL Sbjct: 65 GRSLDKITQADTLESYPKLSQELGKLASGQYLAELVLCLAVS-----------EQPQGEL 113 Query: 111 YDMLN---IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 Y++L L + Q LL G G + +C +T T + P+ Sbjct: 114 YELLKEHLRRLEDISSGQSLHSHLAQAVFHLLAIAGIGPQVHRCCLTQETLAANFSDPRW 173 Query: 168 GGAVCRSVGL 177 G Sbjct: 174 RVGFSFEGGG 183 >gi|319947867|ref|ZP_08022054.1| DNA repair protein RecO [Dietzia cinnamea P4] gi|319438473|gb|EFV93406.1| DNA repair protein RecO [Dietzia cinnamea P4] Length = 301 Score = 45.1 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 69/225 (30%), Gaps = 22/225 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGR--HLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 + D +++ GE + I+ ++T ++G + RM L+ +V V Sbjct: 4 FTDTGLVVRTYDLGEADRIVTLLTERHGLVRAVARAVRRTRSRMGASLEPFAVVEVQIAP 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF---LP--EREPCLELY--- 111 R + LG R A+ L + Y S + L E P L Sbjct: 64 GRGSSGLGTVRQATSRESLARPLVADYPAY--TSGCVVLETAERLAGEEGAPTPRLLGLA 121 Query: 112 -DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L + P ++ F+ L + G+ L CV G SGG Sbjct: 122 VGALRSLAEHRRAPGLVADAFL---LRAMAASGWEPVLDCCVRCGALGPHRAFHVASGGT 178 Query: 171 VCRSVGLPYAEKMLV-----LPSFLWKEEQTIDADSLKSAFQLTD 210 VC + L + L + S A Q + Sbjct: 179 VCVHCRPQGCAMLSPGVAEHLSALLAGRWDAVGLSSPAVARQASG 223 >gi|256825022|ref|YP_003148982.1| DNA replication and repair protein RecO [Kytococcus sedentarius DSM 20547] gi|256688415|gb|ACV06217.1| DNA replication and repair protein RecO [Kytococcus sedentarius DSM 20547] Length = 279 Score = 45.1 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 7/209 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WR 59 ++D AI+L GE + I+ ++ Q G+ + + R + L+ +V V + Sbjct: 4 YRDAAIVLRTHPLGEADRIVTLLGHQRGKVRAVAKGVRRTRSRFGARLEPAMVVDVQCYE 63 Query: 60 SRLAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + + E L ++ A ++ + E E + + +L L Sbjct: 64 GRTLDTI--TQAEGLAAYGEAIARDYPRWVCSTVMCETADSLVDEGETSPQQFRLLAGAL 121 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + + L + G+ + C G +GGAVC S Sbjct: 122 SALAVGQWPADLLLDGYLLRAMAIAGWPMMARDCARCGAPGPHRAFHVAAGGAVCPSCRT 181 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAF 206 AE + D +++ Sbjct: 182 AGAEAPHPDSFTMLHALGESDWGTVRGLL 210 >gi|198274302|ref|ZP_03206834.1| hypothetical protein BACPLE_00446 [Bacteroides plebeius DSM 17135] gi|198272792|gb|EDY97061.1| hypothetical protein BACPLE_00446 [Bacteroides plebeius DSM 17135] Length = 241 Score = 45.1 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 19/161 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVN 57 M + D ++L V Y +K+ I+ + T Q+G + +S + + + +LV V Sbjct: 1 MLQKLDGVVLHVVRYSDKSNIVHIYTCQHGSMSFVIPATRSRKSLVNGALFRPLSLVEVE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLS----SSLFLY-GLQSIVPLFRFLPEREPCLELYD 112 R +L + E+ + L L + L L E L+ Sbjct: 61 ADVRSRTSLPPVK----EARLSYPLESVPYDPYKLSIAMFLAEFLSHALREEGKNEPLFA 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLL----KNIGFGLDLT 149 ++ + + L+ L + +GF +L Sbjct: 117 ---YLVSSIRWLDACRSDYANFHLVFLIRLSRFLGFYPNLE 154 >gi|71064911|ref|YP_263638.1| DNA replication and repair protein RecO [Psychrobacter arcticus 273-4] gi|71037896|gb|AAZ18204.1| DNA replication and repair protein RecO [Psychrobacter arcticus 273-4] Length = 254 Score = 45.1 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 53/161 (32%), Gaps = 22/161 (13%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------------SHRMQPILQA--GN 52 +L R Y EK + + ++Q+G G + G ++ Q + Sbjct: 8 GYLLHQRPYQEKRALYYLFSQQHGVIHGIGKKGAPLFMPLQLFATGKRDLKTFSQINIAS 67 Query: 53 LVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + + + QN E + + ++ L L+R LP +P L+ Sbjct: 68 FISAHQSA--PQNDDAANAE---TRYQESITGQHQYAALYLNEILWRLLPTEDPMPILWQ 122 Query: 113 MLNIFLNCHKIPSVIGKI---FVQIELMLLKNIGFGLDLTK 150 L K P ++ E L +GF L L + Sbjct: 123 HYQDSLYKLKKPLSADELRLCLRHFESYLFNELGFSLTLNQ 163 >gi|294661225|ref|YP_003573101.1| hypothetical protein Aasi_1674 [Candidatus Amoebophilus asiaticus 5a2] gi|227336376|gb|ACP20973.1| hypothetical protein Aasi_1674 [Candidatus Amoebophilus asiaticus 5a2] Length = 217 Score = 45.1 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 11/142 (7%) Query: 13 RSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAGNLVR-VNWRSRLA--QNL 66 Y E +II+ + T +G+ VR ++ + Q + V + + Q + Sbjct: 1 MKYREASIIVRIFTELFGKQSYVVNSVRMLKARHSIALFQPFMPLDMVVYHKKSVTLQRI 60 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYD-MLNIFLNCHKIP 124 E + + +L + L + L E E L++ +L + + + Sbjct: 61 VEVKC---HTPITNILCDLKKATIATFLTELLNKVLYEEEHNENLFEFLLQAVIKLNSLA 117 Query: 125 SVIGKIFVQIELMLLKNIGFGL 146 ++ L L +GFGL Sbjct: 118 DRYELFYLDFMLQLCSYLGFGL 139 >gi|28211640|ref|NP_782584.1| DNA repair protein RecO [Clostridium tetani E88] gi|28204082|gb|AAO36521.1| DNA repair protein recO [Clostridium tetani E88] Length = 181 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 2/106 (1%) Query: 72 EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIF 131 E+LES L Y + LPE E L+ + ++ + Sbjct: 8 EILESFQELLSDLDTITYASYFCELVDICLPEGESNRLLFKEFVTIFYLMRTRAIDLETL 67 Query: 132 VQ-IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSV 175 + EL +LK G+ L L KC + ++S + G +C + Sbjct: 68 ARVFELRILKTTGYELSLDKCSICKEKITSSNYISLQFLGGLCNNC 113 >gi|160895176|ref|ZP_02075949.1| hypothetical protein CLOL250_02736 [Clostridium sp. L2-50] gi|156863210|gb|EDO56641.1| hypothetical protein CLOL250_02736 [Clostridium sp. L2-50] Length = 247 Score = 44.7 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 64/184 (34%), Gaps = 28/184 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 I+L GE + L ++TR+ G+ F + R L + + V + Sbjct: 9 GIVLSSGLQGEYDRRLVILTREQGKITAFAKGV--RRPSSQLISKTQLFV---------M 57 Query: 67 GEFRFEVLESHCAKLLSSSLF-------------LYGLQSIVPLFRFLPEREPCLELYDM 113 G F + L++ YG + F E + + ++ Sbjct: 58 GAFTVYPGRN-AYTLINVDAKEYFHELTFDMNKYCYGSYFCEMMSYFTREGDRSADYLNL 116 Query: 114 LNIFLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 L + LN K ++ ++ EL ++ G GL C + G + P SGG + Sbjct: 117 LFVSLNALK-KGLLPVKLIRCVYELKIMDIFGQGLQSFHCPICGSDRLTRIFDPLSGGIL 175 Query: 172 CRSV 175 C + Sbjct: 176 CENC 179 >gi|302871792|ref|YP_003840428.1| DNA repair protein RecO [Caldicellulosiruptor obsidiansis OB47] gi|302574651|gb|ADL42442.1| DNA repair protein RecO [Caldicellulosiruptor obsidiansis OB47] Length = 244 Score = 44.7 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 8/174 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL----QAGNLVRVNWRSRL 62 I+L ++ E + IL V T +G+ +N R+ +L Q R + Sbjct: 8 GIVLKEINFEESSKILTVFTSDFGKIQVLSKN--CKRLLSVLSAVSQPLMYCEFVIR-KT 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 V+ES +L +Y I + FL + ++ +L L K Sbjct: 65 KDIFSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSLYLLK 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 + E+ +L GF T+CV + S K+ G C Sbjct: 125 KGKDPEVVSRIFEIKILVYTGFFPQFTQCVKCQRKDITRAFFSFKNSGLTCEKC 178 >gi|121595568|ref|YP_987464.1| DNA repair protein RecO [Acidovorax sp. JS42] gi|166221880|sp|A1WAW3|RECO_ACISJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120607648|gb|ABM43388.1| DNA repair protein RecO [Acidovorax sp. JS42] Length = 262 Score = 44.7 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 3/129 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A +L + E ++ILE TR YGR + + +P+L +RV + Sbjct: 9 EPAYVLHSYDWSESSLILETFTRHYGRVALVAKGAKKPTSNFRPVLLPLQPLRVTYTLGG 68 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + E ++ + L GL L R L + L+D + Sbjct: 69 EGHGEIHALKGAEWAGGHVMPTGDALLSGLYLNELLLRLLAREDTHAPLFDTYAGVVRVL 128 Query: 122 KIPSVIGKI 130 G+ Sbjct: 129 ATVDHEGEH 137 >gi|329954163|ref|ZP_08295258.1| DNA repair protein RecO [Bacteroides clarus YIT 12056] gi|328528140|gb|EGF55120.1| DNA repair protein RecO [Bacteroides clarus YIT 12056] Length = 242 Score = 44.7 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 27/165 (16%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q +LV + Sbjct: 1 MLQKTQGIVLHSLKYKDTSIIVDIYTEVSGRASFLVPVSRSRKAAVKSVLFQPLSLVELE 60 Query: 58 ---------WRSRLAQNLGEFR---FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE 105 ++ + A++L F ++ +S A LS L+R L E Sbjct: 61 ADFRPNTTIYKVKEAKSLYPFTSIPYDPYKSAIALFLSE-----------FLYRALREEA 109 Query: 106 PCLELYDMLNIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLT 149 L+ L + S + + L + +G +L Sbjct: 110 ENRPLFAYLQHSIVWLDECGSGFANFHLVFLMRLSRFLGLYPNLE 154 >gi|325856530|ref|ZP_08172219.1| DNA repair protein RecO [Prevotella denticola CRIS 18C-A] gi|327313064|ref|YP_004328501.1| DNA repair protein RecO [Prevotella denticola F0289] gi|325483499|gb|EGC86472.1| DNA repair protein RecO [Prevotella denticola CRIS 18C-A] gi|326945921|gb|AEA21806.1| DNA repair protein RecO [Prevotella denticola F0289] Length = 242 Score = 44.7 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 63/166 (37%), Gaps = 27/166 (16%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVR-- 55 M + AI+L +G+ ++I++++T Q GR V + + + Q L+ Sbjct: 1 MILKSKAIVLRSLKFGDASLIIDMLTEQEGRVSFIVHIPKTAKGKIKKQYFQPLTLLDLV 60 Query: 56 VNWRSRLAQN----------LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE 105 ++R R++ G F+ ++S A LL S FLY + + Sbjct: 61 FDYRQRVSLQRIKDVRILHPYGSIPFDPVKS--AILLFLSEFLYHVTRG---------EQ 109 Query: 106 PCLELYDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTK 150 LY+ + + F + + L + IGF +L Sbjct: 110 RNAGLYNYVKASVEWLDEAEQGYASFHLVFMMRLSRFIGFFPNLEA 155 >gi|15805845|ref|NP_294543.1| hypothetical protein DR_0819 [Deinococcus radiodurans R1] gi|56554135|pdb|1U5K|A Chain A, Recombinational Repair Protein Reco gi|56554136|pdb|1U5K|B Chain B, Recombinational Repair Protein Reco gi|61680145|pdb|1W3S|A Chain A, The Crystal Structure Of Reco From Deinococcus Radiodurans. gi|61680146|pdb|1W3S|B Chain B, The Crystal Structure Of Reco From Deinococcus Radiodurans. gi|151568117|pdb|2V1C|C Chain C, Crystal Structure And Mutational Study Of Recor Provide Insight Into Its Role In Dna Repair gi|6458540|gb|AAF10403.1|AE001936_12 hypothetical protein DR_0819 [Deinococcus radiodurans R1] Length = 244 Score = 44.7 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 61/213 (28%), Gaps = 33/213 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-----------PILQ-AGNLV 54 I++ R +II+ ++T Q G+ R G + + Q N + Sbjct: 10 GIVIRRRVTPAGDIIVTLLTPQ-GKLKAIARGGVKGPLSSSLNLFHHVGVQVYQGPHNDL 68 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++ L L E A L++ E E + +D+ Sbjct: 69 ASVKQAVLEGALPTLA-EPERYAFAHLMAE-----------FADALFQEGEFSEQAFDLF 116 Query: 115 NIFL-NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L P V + LL G +C G D P G +C Sbjct: 117 AASLRGVAHQPDPEWVALV-MSYKLLGLAGVIPQTARCARCGA-PDPEHPDPLGGQLLCS 174 Query: 174 SVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAF 206 + P + + +++++F Sbjct: 175 KCAA-----LPPYPPAVLDFLRHAVRRTVRASF 202 >gi|218131842|ref|ZP_03460646.1| hypothetical protein BACEGG_03464 [Bacteroides eggerthii DSM 20697] gi|317474543|ref|ZP_07933817.1| DNA repair protein RecO [Bacteroides eggerthii 1_2_48FAA] gi|217986145|gb|EEC52484.1| hypothetical protein BACEGG_03464 [Bacteroides eggerthii DSM 20697] gi|316909224|gb|EFV30904.1| DNA repair protein RecO [Bacteroides eggerthii 1_2_48FAA] Length = 242 Score = 44.7 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q +LV + Sbjct: 1 MLQKTQGIVLHSLKYKDTSIIVDIYTEVSGRASFLVPVSRSRKAAVKSVLFQPLSLVELE 60 Query: 58 WRSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R + ++ + +S + L L+R L E L+ L Sbjct: 61 ADFRPNTTI--YKVKEAKSFYPFTSIPYDPYKSAIALFLSEFLYRALREEAENRPLFAYL 118 Query: 115 NIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLT 149 + S + + L + +G +L Sbjct: 119 QHSIVWLDECGSGFANFHLVFLMRLSRFLGLYPNLE 154 >gi|218885393|ref|YP_002434714.1| recombination protein O RecO [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756347|gb|ACL07246.1| Recombination protein O RecO [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 506 Score = 44.7 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 59/194 (30%), Gaps = 13/194 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + + +I+ + E ++ + ++ G F G R + L N + Sbjct: 1 MEFSEQVLIVRTGRFREADLWVRFLSPTRGLLTAFAFGGCRSRKRFCGCLDLFNRSLLRI 60 Query: 59 RS-RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF--LPEREPCLELYDMLN 115 +S R Q L +L F + + L PE + ++ Sbjct: 61 KSTRGGQYLSIQEGTLLRGPDRLRRDWPRFGAAVNCLKFLEALGCGPEGAA--ATHQLVE 118 Query: 116 IFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + + + V L L G+ L C G DL + G A Sbjct: 119 DVLELLEGGGPVPDMLPVLFRLRLTAEQGYAPRLDSCASCGA--DLTHAA---GAAFLVQ 173 Query: 175 VGLPYAEKMLVLPS 188 G+ + LP Sbjct: 174 EGVAQCDACAPLPG 187 >gi|34541600|ref|NP_906079.1| DNA repair protein RecO [Porphyromonas gingivalis W83] gi|81572004|sp|Q7MTF5|RECO_PORGI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|34397917|gb|AAQ66978.1| DNA repair protein RecO, putative [Porphyromonas gingivalis W83] Length = 245 Score = 44.7 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 17/187 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV-----RNGQSHRMQPILQAGNLVR 55 M AI+L +Y + I + +R+ GR + R ++ ++ N + Sbjct: 1 MIIVSRAIVLHNTAYNDSYSIAHLFSRESGRVSYLIPRSSKRGKSGGSLRLLISPLNELE 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSS----LFLYGLQSIVPLFRFLPEREPCLELY 111 + + ++L + L S ++ S + L+ + + + R LPE + LY Sbjct: 61 ITAEHKQHRDLHFIKEAKLCSLHGRIQSDPVRNSIALFLAEFLYLILR-LPEAD--TNLY 117 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 D + ++ + F + LL +G DL G + W P G Sbjct: 118 DFVAFSIDKLEEMDGPMANFHLAFLFRLLVPLGLIPDLQ----FGGSVIPRWFDPADGRF 173 Query: 171 VCRSVGL 177 V + Sbjct: 174 VPNAPAH 180 >gi|255534630|ref|YP_003095001.1| DNA recombination and repair protein RecO [Flavobacteriaceae bacterium 3519-10] gi|255340826|gb|ACU06939.1| DNA recombination and repair protein RecO [Flavobacteriaceae bacterium 3519-10] Length = 230 Score = 44.7 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 22/168 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------PILQAGNLVRVNWRSR 61 +L YG+ + +L ++ G F R S R + P+ Q G + V R R Sbjct: 8 FLLSYIKYGDNDAVLHCFSKDAGYQSFFARGIYSARNKKKAYLFPLNQIG--ITVVPR-R 64 Query: 62 LAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + E++ S + L L + L E Y + FLN Sbjct: 65 NSGGIPTISKIEMV-SQDYDFADVKVNTVLLFVADFLNQVLREETHHSNTYSEIGRFLNA 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 + ++ L+ ++ + D ++ P+SG Sbjct: 124 LYSGDLGAYTAFIFKI-----------LSCQGLSPLPGDGNYLDPESG 160 >gi|317056493|ref|YP_004104960.1| DNA repair protein RecO [Ruminococcus albus 7] gi|315448762|gb|ADU22326.1| DNA repair protein RecO [Ruminococcus albus 7] Length = 251 Score = 44.7 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 52/159 (32%), Gaps = 6/159 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNW----RSR 61 ++L GE + + V+T + G +VR G+ S + Q+ + + + ++ Sbjct: 6 GLVLKETDSGESSKSICVLTAEMGVIYIYVRGGRKSSKTTSATQSFSYSELCFEEKKNAK 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E ++ L ++ L E + C E+ + L Sbjct: 66 GQVSRYLNSSEPVKLFYNIRLDAAKVALASYFSELLIYSGTEGQNCAEVMRLALNTLYFL 125 Query: 122 KIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + E LL +G L C +D Sbjct: 126 DEDKMETDLLKCVFEFRLLCELGMRPKLVGCAFCFKYED 164 >gi|303232260|ref|ZP_07318959.1| DNA repair protein RecO [Atopobium vaginae PB189-T1-4] gi|302481670|gb|EFL44731.1| DNA repair protein RecO [Atopobium vaginae PB189-T1-4] Length = 249 Score = 44.7 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 61/200 (30%), Gaps = 35/200 (17%) Query: 6 DAIILGVR-SYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR--- 61 A+++ R EK++I+ ++ + L+ G + SR Sbjct: 10 HALVIDHRVRLKEKDVIVRLLCEDGCLRSAVAKGA--------LRPGG----RFASRTEL 57 Query: 62 -------LAQNLGEFRFEVLESHCA--KLLSSSLFLYGLQSIVPLFRFL---PEREPCLE 109 L++ + + A + + L R+L R+ Sbjct: 58 GCEADFLLSEGTSLDTIQEAQLRNANVHIREDPDTFALACAACELTRYLSSHDARDAY-- 115 Query: 110 LYDMLNIFLNCHKIP---SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 ++ + FL K + L L+ + G+ L C + + + S Sbjct: 116 VFAICTAFLAAIKSAKSRNSALAFMCAYTLKLMAHAGYMPILASCASC-SDEQVAYFSVL 174 Query: 167 SGGAVCRSVGLPYAEKMLVL 186 GGA+C S + + Sbjct: 175 DGGALCASCARG-QDMLKPY 193 >gi|254880796|ref|ZP_05253506.1| DNA repair protein [Bacteroides sp. 4_3_47FAA] gi|294775121|ref|ZP_06740650.1| DNA repair protein RecO [Bacteroides vulgatus PC510] gi|319639806|ref|ZP_07994536.1| DNA repair protein [Bacteroides sp. 3_1_40A] gi|254833589|gb|EET13898.1| DNA repair protein [Bacteroides sp. 4_3_47FAA] gi|294451165|gb|EFG19636.1| DNA repair protein RecO [Bacteroides vulgatus PC510] gi|317388623|gb|EFV69472.1| DNA repair protein [Bacteroides sp. 3_1_40A] Length = 241 Score = 44.7 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 11/145 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + + I+++ TR+ GR V +S + + Q +++ Sbjct: 1 MLQKTVGIVLHTLKYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLES-HCAKLL--SSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R NL +R + +S + + L + L+R L E L+ L Sbjct: 61 ADYRPMSNL--YRIKEAKSWYPFRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLL 139 + + F L+ L Sbjct: 119 EHSIRWLDE---CDRSFSNFHLVFL 140 >gi|188995818|ref|YP_001930070.1| probable DNA repair protein RecO [Porphyromonas gingivalis ATCC 33277] gi|254764654|sp|B2RM78|RECO_PORG3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|188595498|dbj|BAG34473.1| probable DNA repair protein RecO [Porphyromonas gingivalis ATCC 33277] Length = 245 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 17/187 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV-----RNGQSHRMQPILQAGNLVR 55 M AI+L +Y + I + +R+ GR + R ++ ++ N + Sbjct: 1 MIIVSRAIVLHNTAYNDSYSIAHLFSRESGRVSYLIPRSSKRGKSGGSLRLLISPLNELE 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSS----LFLYGLQSIVPLFRFLPEREPCLELY 111 + + ++L + L S ++ S + L+ + + + R LPE + LY Sbjct: 61 ITAEHKQHRDLHFIKEAKLCSLHGRIQSDPVRNSIALFLAEFLYLILR-LPEAD--TNLY 117 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 D + ++ + F + LL +G DL G + W P G Sbjct: 118 DFVAFSIDKLEEMDGPMANFHLAFLFRLLVPLGLIPDLQ----FGGSVIPRWFDPADGRF 173 Query: 171 VCRSVGL 177 V + Sbjct: 174 VPNAPAH 180 >gi|313123893|ref|YP_004034152.1| DNA repair protein reco [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280456|gb|ADQ61175.1| DNA repair protein recO [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 249 Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 20/178 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR--------VN 57 ++ + Y E +I+ ++ T++ G + G M+P Q V + Sbjct: 9 HGLLFKRQQYKEADILAKLWTKELGIVTVIAKGG----MRPKSQLAAAVLPFTEGTFGIL 64 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + L ++ L H Y E + YD+L + Sbjct: 65 TRYKGISQLWTYK--KLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVA 122 Query: 118 LN---CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 N + P +I +I +L LL G L CV+ G + + S +GG VC Sbjct: 123 FNRIVAGQDPEIIAQIV---QLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVC 177 >gi|320534193|ref|ZP_08034719.1| DNA repair protein RecO [Actinomyces sp. oral taxon 171 str. F0337] gi|320133588|gb|EFW26010.1| DNA repair protein RecO [Actinomyces sp. oral taxon 171 str. F0337] Length = 171 Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AIIL GE + I+ ++TR +G+ + + + R L+ ++ V + Sbjct: 6 YRDEAIILRTYKLGEADRIIVMLTRHHGQVRAVAKGVRRTTSRFGARLEPFSMTDVQLHA 65 >gi|116514233|ref|YP_813139.1| recombinational DNA repair protein RecO [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275035|sp|Q04A21|RECO_LACDB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116093548|gb|ABJ58701.1| DNA replication and repair protein RecO [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 249 Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 62/178 (34%), Gaps = 20/178 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV--------RVN 57 ++ + Y E +++ ++ T++ G + G M+P Q V + Sbjct: 9 HGLLFKRQQYKEADLLAKLWTKELGIVTVIAKGG----MRPKSQLAAAVLPFTEGTFSIL 64 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + L ++ L H Y E + YD+L + Sbjct: 65 TRYKGISQLRTYK--KLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVA 122 Query: 118 LN---CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 N + P +I +I +L LL G L CV+ G + + S +GG VC Sbjct: 123 FNRIVAGQDPEIIAQIV---QLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVC 177 >gi|330823893|ref|YP_004387196.1| DNA repair protein RecO [Alicycliphilus denitrificans K601] gi|329309265|gb|AEB83680.1| DNA repair protein RecO [Alicycliphilus denitrificans K601] Length = 257 Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 12/180 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A IL + E ++IL+V T YGR + + +P+L +R+ W Sbjct: 9 EPAYILHAYDWSESSLILDVFTCHYGRVALVAKGAKKPTSNFRPVLLPLQPLRLAWGLAG 68 Query: 63 AQNLGE-FRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDM---LNIF 117 GE + E +L + L GL L R L + +L+D+ + Sbjct: 69 EVGQGEIHTLKAAEWVGGHVLPTGDALLSGLYLNELLLRLLAREDTHAQLFDLYAGVVRV 128 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + + EL+LL+ IG L T L ++P+S A+ GL Sbjct: 129 LGSGAHGEALEPVLRAFELLLLREIGLLPALDAETAT-----LGALAPQSRYALVAEGGL 183 >gi|325686030|gb|EGD28088.1| DNA repair protein RecO [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 249 Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 20/178 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR--------VN 57 ++ + Y E +I+ ++ T++ G + G M+P Q V + Sbjct: 9 HGLLFKRQQYKEADILAKLWTKELGIVTVIAKGG----MRPKSQLAAAVLPFTEGTFGIL 64 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + L ++ L H Y E + YD+L + Sbjct: 65 TRYKGISQLWTYK--KLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVA 122 Query: 118 LN---CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 N + P +I +I +L LL G L CV+ G + + S +GG VC Sbjct: 123 FNRIVAGQDPEIIAQIV---QLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVC 177 >gi|33239847|ref|NP_874789.1| putative recombination protein O [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237373|gb|AAP99441.1| Recombinational DNA repair protein RecO [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 256 Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 24/164 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPI-------LQAGNLVRVN 57 + L V GE + +L ++T + G V + R+ L G + Sbjct: 9 GLCLKVGPLGENDRLLTLLTHEEGIVRIAVPGARRPKSRLAATSALTFLELLIGGKSTLR 68 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNI 116 R+R + +V++S +KL L Q++ L L +P E+ + I Sbjct: 69 -RAR--------QIKVIKS-FSKLGEKLETLSAAQALSELAMLLVGTNDPQPEILQAVLI 118 Query: 117 FLNCHKIPSVIG----KIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + + VQ + LL G+GL + KC TG+ Sbjct: 119 HLERLQKEDIKPVEALANCVQACVHLLALGGYGLPIQKCCWTGI 162 >gi|157374289|ref|YP_001472889.1| DNA repair protein RecO [Shewanella sediminis HAW-EB3] gi|157316663|gb|ABV35761.1| DNA repair protein RecO [Shewanella sediminis HAW-EB3] Length = 226 Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 7/145 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA-Q 64 +L R + + ++++ ++ GR R ++ ILQ + R + + Sbjct: 4 GYVLHTRPFRDSSVLVNMLVDGQGRVDCVARLGSGKSSIKSILQPFQPLIFELSGRSSLK 63 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 NL + E + A LS + G L R L+ + L Sbjct: 64 NLS--QVEA--ASPAIPLSGEVSFSGFYLNELLVRCTSVDHGGEALFFTYHRTLMAMAA- 118 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLT 149 EL LLK IG LT Sbjct: 119 GFCQSQLRYFELELLKEIGLMPTLT 143 >gi|300741495|ref|ZP_07071516.1| DNA repair protein RecO [Rothia dentocariosa M567] gi|300380680|gb|EFJ77242.1| DNA repair protein RecO [Rothia dentocariosa M567] Length = 255 Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 47/129 (36%), Gaps = 10/129 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-RS 60 +D A+IL ++ GE + I+ ++T+ G ++ + + L+ ++ R Sbjct: 8 RDHALILRTQNLGEADRIIIMLTQNNGVIHAVAKSIRKPNSKFGARLEPYMHTDISLTRG 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL------PEREPCLELYDML 114 + ++ + ++ A L+ + +I + L + P L Sbjct: 68 KTNLHIISQTA-TIHAYTATLMGNYNAYTAANTIAEIAETLNTNSTPHDTNPHYHLTHGA 126 Query: 115 NIFLNCHKI 123 L +K Sbjct: 127 IATLAHNKH 135 >gi|104774143|ref|YP_619123.1| DNA repair protein RecO (recombination protein O) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|300812203|ref|ZP_07092645.1| DNA repair protein RecO [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|119361462|sp|Q1G9W7|RECO_LACDA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|103423224|emb|CAI98052.1| DNA repair protein RecO (Recombination protein O) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|300496839|gb|EFK31919.1| DNA repair protein RecO [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 249 Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 62/178 (34%), Gaps = 20/178 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR--------VN 57 ++ + Y E +++ ++ T++ G + G M+P Q V + Sbjct: 9 HGLLFKRQQYKEADLLAKLWTKELGIVTVIAKGG----MRPKSQLAAAVLPFTEGTFGIL 64 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + L ++ L H Y E + YD+L + Sbjct: 65 TRYKGISQLRTYK--KLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVA 122 Query: 118 LN---CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 N + P +I +I +L LL G L CV+ G + + S +GG VC Sbjct: 123 FNRIVAGQDPEIIAQIV---QLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVC 177 >gi|219847691|ref|YP_002462124.1| DNA repair protein RecO [Chloroflexus aggregans DSM 9485] gi|219541950|gb|ACL23688.1| DNA repair protein RecO [Chloroflexus aggregans DSM 9485] Length = 251 Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 26/184 (14%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------------PILQA 50 ++ +A+IL E + +L + T + G+ + + + + +L Sbjct: 6 YRSEAVILRRNDVAEADRLLLIATPK-GKRWVIAKGARKTKSRLAGHIELFTHVHMMLAV 64 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 G + + +S++ R E+ C + RF E + L Sbjct: 65 GRNLDIVTQSQIVHAFPTLRSELSRLGCGYY-----------AAELYDRFTVEEDDNPPL 113 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSG 168 + +L EL LL +G+ L +CVV +T D SP G Sbjct: 114 FQLLVETFMSLDRSPQPDLTLRSFELHLLHLLGYRPQLHRCVVCDDILTPDADRYSPTLG 173 Query: 169 GAVC 172 G +C Sbjct: 174 GVLC 177 >gi|284036117|ref|YP_003386047.1| DNA repair protein RecO [Spirosoma linguale DSM 74] gi|283815410|gb|ADB37248.1| DNA repair protein RecO [Spirosoma linguale DSM 74] Length = 230 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 18/159 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQ-PILQAGNLVR- 55 M + I L Y E +II V T ++G VR +S + + Q L+ Sbjct: 1 MLQKTRGIALSYIRYRETSIIARVYTEEFGLQSYIINSVRTARSKNNKIALFQPLTLLEM 60 Query: 56 -VNWRS-----RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE 109 V ++S RL++ + F+ + + L + L E Sbjct: 61 VVYYKSDRDLTRLSEVKTNYPFQ------SLPFEVGKSTIAMFVTEMLNKVLKEEAGSPV 114 Query: 110 LYDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLD 147 L+ L + + + + F + L L +GFG + Sbjct: 115 LFRFLVESVVFLEEATTNYENFHLAFLLKLSSFLGFGPE 153 >gi|24214385|ref|NP_711866.1| recombinational DNA repair protein [Leptospira interrogans serovar Lai str. 56601] gi|45657952|ref|YP_002038.1| hypothetical protein LIC12104 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195322|gb|AAN48884.1| recombinational DNA repair protein [Leptospira interrogans serovar Lai str. 56601] gi|45601193|gb|AAS70675.1| RecO [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 260 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 70/172 (40%), Gaps = 18/172 (10%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGF-VRNGQSHRMQPI--LQAGNLVRVNW-RSRL 62 I+L ++ E + ++ ++ + G F +R + + +PI ++ G+L V++ S+ Sbjct: 14 GIVLESKTIQEGDALIRLL-PEAGSVENFRIRGIRKSKTRPIASVEPGSLSDVDYYHSKN 72 Query: 63 AQNLGEFRFEVLES--HCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLN 119 + + + + S L + +V L P+ + +L L Sbjct: 73 KE---THNVKEISLINRFDRAKSGYLGTVLVSYLVELASSFTPDGAEHPGEFRLLFGALE 129 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTK---CVVTGVT-QDLLWVSPKS 167 + + I +L LL + GF L+K C G +++ +V+ ++ Sbjct: 130 ELEENGISILILPFFKLRLLVSGGF---LSKELICHSCGAELKEMTFVTLQT 178 >gi|325125923|gb|ADY85253.1| DNA repair protein recO protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 249 Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 62/178 (34%), Gaps = 20/178 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV--------RVN 57 ++ + Y E +++ ++ T++ G + G M+P Q V + Sbjct: 9 HGLLFKRQQYKEADLLAKLWTKELGIVTVIAKGG----MRPKSQLAAAVLPFTEGTFSIL 64 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + L ++ L H Y E + YD+L + Sbjct: 65 TRYKGISQLRTYK--KLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVA 122 Query: 118 LN---CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 N + P +I +I +L LL G L CV+ G + + S +GG VC Sbjct: 123 FNRIVAGQDPEIIAQIV---QLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVC 177 >gi|229828495|ref|ZP_04454564.1| hypothetical protein GCWU000342_00557 [Shuttleworthia satelles DSM 14600] gi|229793089|gb|EEP29203.1| hypothetical protein GCWU000342_00557 [Shuttleworthia satelles DSM 14600] Length = 248 Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 10/163 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L GE + + ++TR+ G F R + R Q + G + + L + L Sbjct: 9 GMVLSTMPIGEFDKRVVLLTRELGEISAFARGARRPRSQLLAATGPMAFGTFE--LYEGL 66 Query: 67 GEFRFEVLESHCAKLLS-----SSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + S A L + L + + + + L +L L Sbjct: 67 NSYTL-ARASIEAYFLEIAEDYDKVCLAAYFLEMAEYYGIENSDESQRL-LLLYQTLRAL 124 Query: 122 KIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 ++ + E+ + G D+ C G + L + Sbjct: 125 ASDKFSPRLLRIIYEIRTMGINGEYPDVFSCAACGRKEGLAYF 167 >gi|256820982|ref|YP_003142261.1| DNA repair protein RecO [Capnocytophaga ochracea DSM 7271] gi|256582565|gb|ACU93700.1| DNA repair protein RecO [Capnocytophaga ochracea DSM 7271] Length = 238 Score = 44.0 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRV 56 MY + AI++ Y + ++I++ T+ G ++ + + + Q L+ + Sbjct: 1 MYDKVRAIVISSLKYSDNSLIVKCFTQTMGTRSYLLQGVLAQKKGNLKTALFQPFMLLEL 60 Query: 57 NWRSRLAQNLG---EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + LG E + V + S L + P E++ Sbjct: 61 VATHKNNGTLGRVKEAKIAVPYYSLHTDMYKSAVSMFLSEVCAFVCT--SEAPDEEMFLF 118 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 L L ++ L + + +GF D T Sbjct: 119 LEQKLLFFDRNDFSANFHLKFLLDITRYLGFYPDTT 154 >gi|149918195|ref|ZP_01906687.1| DNA repair protein RecO [Plesiocystis pacifica SIR-1] gi|149820955|gb|EDM80362.1| DNA repair protein RecO [Plesiocystis pacifica SIR-1] Length = 268 Score = 44.0 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 64/182 (35%), Gaps = 15/182 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-----PILQAGNLVRVNWRS 60 A++L R+Y E ++++ ++T G+ F R + + P+ G V R Sbjct: 14 PAVVLRTRAYREADLVVILLTPTLGKVDAFARAARRSHKRFPGGLPVGGRGEAVLGRGRG 73 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 L L F S + + + L R L + +L + Sbjct: 74 SL-TPLDRFSPTTEHSRLGR---DLEAFAYVNYLCELSDRLLGGSAADPTSFALLCDAIE 129 Query: 120 CHKIPSVI-GKIFVQIELMLLKNIGFGLDLTKCVVTG----VTQDLLWVSPKSGGAVCRS 174 P + EL LL ++G L C V G +D + S GGA+C + Sbjct: 130 TALDPDARDPGTLRRFELSLLHSLGLLPALASCSVCGDPVLAGRDGVPFSTGRGGALCLA 189 Query: 175 VG 176 G Sbjct: 190 HG 191 >gi|22299777|ref|NP_683024.1| DNA repair protein RecO [Thermosynechococcus elongatus BP-1] gi|81742410|sp|Q8DGS9|RECO_THEEB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|22295961|dbj|BAC09786.1| tlr2234 [Thermosynechococcus elongatus BP-1] Length = 279 Score = 44.0 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 25/169 (14%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------------PILQA 50 ++ I L GE + +L V +R G + + R + + Sbjct: 5 YRTIGINLKAMPLGESDRLLSVFSRDRGLLKLVAPHSRGSRSRLGGRVDLFVVNDLFISP 64 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 G + ++ ++ A+ L V L++ P ++P EL Sbjct: 65 GRNLDRILQAETVATYQGLHHQLTTLTAAQYLGE----------VVLYQIHP-QQPQPEL 113 Query: 111 YDMLNIFLNCHKIPS--VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 +D L+ + S I V+ +L+ G + +C +G Sbjct: 114 FDWFCATLDQLQGASSRAALAILVRGLCGILRLGGIAPEWYQCHESGCK 162 >gi|253580800|ref|ZP_04858063.1| DNA repair protein RecO [Ruminococcus sp. 5_1_39B_FAA] gi|251847870|gb|EES75837.1| DNA repair protein RecO [Ruminococcus sp. 5_1_39BFAA] Length = 247 Score = 44.0 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV----RVNWRSR 61 ++L GE + + ++TR+ G+ F + + L A N + R Sbjct: 5 QGVVLSAMPVGEYDKRIVLLTRERGKISAFAKGAR-RPNSQFLAAANPFVFGTFALYEGR 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-----RFLPEREPCLELYDMLNI 116 + NL + + H +L +Y + L + E+E LY + Sbjct: 64 SSYNLNQVS---ISHHFVELAGEQPGIYYGYYFLELADYFGQEGIDEKESMNLLYVTVKA 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 LN + ++ I EL ++ G L CV Sbjct: 121 LLNPNIDNRLVRCI---FELRMMAAQGLCPSLFHCV 153 >gi|320539211|ref|ZP_08038882.1| putative gap repair protein [Serratia symbiotica str. Tucson] gi|320030849|gb|EFW12857.1| putative gap repair protein [Serratia symbiotica str. Tucson] Length = 155 Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 90 GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDL 148 GL L R L + L+ L + ++ EL LL ++G+GLD Sbjct: 1 GLYVNELLSRVLEQETNYAVLFFDYLKCLQTLAAEEHSPEYALRQFELALLNHLGYGLDF 60 Query: 149 TKCVVTGV 156 C +G Sbjct: 61 LHCAGSGQ 68 >gi|167772056|ref|ZP_02444109.1| hypothetical protein ANACOL_03430 [Anaerotruncus colihominis DSM 17241] gi|167665854|gb|EDS09984.1| hypothetical protein ANACOL_03430 [Anaerotruncus colihominis DSM 17241] Length = 230 Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 53/171 (30%), Gaps = 31/171 (18%) Query: 22 LEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKL 81 L ++T++ G + R + + L R+ L + VL S+ + Sbjct: 2 LTLLTKERGVISAYARGA--KKPRGTL------------RVPTELLSYSCFVLFSNKERY 47 Query: 82 LSSSLFLYG-----------LQSIVPLFRFLPEREP-CLELYDMLNIFLNCH----KIPS 125 L G L L E P + L + LN + Sbjct: 48 SVDRADLEGVFMGVRGDVCKLSLASYLCELTAETAPRGESAGEYLRLLLNSLYMLDRDKR 107 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 I EL LL G+ +L C G + +L++ P +G C Sbjct: 108 ACAFIKPLYELRLLTMAGYMPNLVACRGCGCFESELIYFLPLTGELACGEC 158 >gi|163754380|ref|ZP_02161502.1| DNA repair protein [Kordia algicida OT-1] gi|161325321|gb|EDP96648.1| DNA repair protein [Kordia algicida OT-1] Length = 239 Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 55/155 (35%), Gaps = 11/155 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN-GQSHRMQ---PILQAGNLVRV 56 M AI++ YG+ +I++ T G +R +S + + Q L+++ Sbjct: 1 MIVTTKAIVISTIKYGDTGVIVKCFTASDGIKSYLLRGILKSKKGKLKIAYFQP--LMQL 58 Query: 57 NWRSRLAQNLGEFRF--EVLESHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYD 112 + +N G + +V + + + + + + L + E E L++ Sbjct: 59 EIVA-SHKNKGSLEYIKDVKTVYPYTSIHTQIAKSAIVLFLSEILNYSIQEEEKNDALFE 117 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 + L I I + L K GF + Sbjct: 118 FIENALQWLDIHDEIANFHLVFLTNLTKYFGFYPE 152 >gi|160900691|ref|YP_001566273.1| DNA repair protein RecO [Delftia acidovorans SPH-1] gi|238687166|sp|A9BNJ3|RECO_DELAS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|160366275|gb|ABX37888.1| DNA repair protein RecO [Delftia acidovorans SPH-1] Length = 256 Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 5/136 (3%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L + E ++ILEV TR GR + + + +P+L + +++ Sbjct: 10 EPAYVLHSYDWSESSLILEVFTRHRGRVALAAKGVKRPTSNFRPVLLPLQPLSLSYSLGG 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 N + E ++ L GL L R L +P L+D+ + Sbjct: 70 EGNAEIHTLKGAEWVGGHVMPQGDALMSGLYLNELLMRLLARDDPYAALFDIYAGVVRVL 129 Query: 122 --KIPSVIGKIFVQIE 135 + I + E Sbjct: 130 AGQHGDAIEPVLRTFE 145 >gi|86131238|ref|ZP_01049837.1| recombination protein O [Dokdonia donghaensis MED134] gi|85818649|gb|EAQ39809.1| recombination protein O [Dokdonia donghaensis MED134] Length = 239 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN-GQSHRMQ---PILQAGNLVRV 56 M + +AI+ YGE ++I++ T+ G +RN +S + + + Q + + Sbjct: 1 MLVKTEAIVFSALKYGEADLIVKAFTKSSGVKSYLLRNILKSKKGKLRVAMFQPLTHLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--------PEREPCL 108 A + + E + AK+++ L+ + + F+ E E Sbjct: 61 E-----ANHKDKGTLESI--REAKVITHYTSLHTQVAKSAIVFFISDMLRSSVQEEEENA 113 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L++ L + S I + + L +GF D Sbjct: 114 PLFEFLVASSLWLDLHSDIANFHLLFLVKLSGYLGFYPD 152 >gi|309775527|ref|ZP_07670527.1| DNA repair protein RecO [Erysipelotrichaceae bacterium 3_1_53] gi|308916621|gb|EFP62361.1| DNA repair protein RecO [Erysipelotrichaceae bacterium 3_1_53] Length = 246 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 13/181 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + I++ VR Y E + +L+V+ R + + P +Q L R+ Sbjct: 1 MQEEVCGILVDVREYREHDALLKVLCEDGSLMSLSARGVRKVTSKNAPAVQLFTLARLQL 60 Query: 59 RSRLAQNLGEFR-FEVLESHCA---KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + ++ R E++ S+ L+ S+ Y + +Y +L Sbjct: 61 NYQETSSMQSLRRAEIINSYRKIREDLMKQSIAAYF--CECIHKSGFEDN-----VYGLL 113 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L+ + ++ + ++ + G + CV QD+ VS + GG VC+ Sbjct: 114 KQSLDILQDAEHPLQLLCLFQAIMNRMHGIEPYVDGCVRCQNMQDIQAVSRRDGGFVCKH 173 Query: 175 V 175 Sbjct: 174 C 174 >gi|150003957|ref|YP_001298701.1| DNA repair protein [Bacteroides vulgatus ATCC 8482] gi|254790556|sp|A6L065|RECO_BACV8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|149932381|gb|ABR39079.1| DNA repair protein [Bacteroides vulgatus ATCC 8482] Length = 241 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 53/145 (36%), Gaps = 11/145 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L +Y + + I+++ TR+ GR V +S + + Q +++ Sbjct: 1 MLQKTVGIVLHTLNYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLES-HCAKLL--SSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R NL +R + +S + + L + L+R L E L+ L Sbjct: 61 ADYRPMSNL--YRIKEAKSWYPFRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLL 139 + + F L+ L Sbjct: 119 EHSIRWLDE---CDRSFSNFHLVFL 140 >gi|288801614|ref|ZP_06407056.1| DNA repair protein RecO [Prevotella melaninogenica D18] gi|288335656|gb|EFC74089.1| DNA repair protein RecO [Prevotella melaninogenica D18] Length = 241 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 27/166 (16%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR---NGQSHRMQPILQAGNLVRVN 57 M + AI+L +G+ ++I+++ T GR R + + Q L+ + Sbjct: 1 MILKSKAIVLRSLKFGDSSLIIDMFTELEGRISFITRIPKTAKGKIKKQYFQPLTLLDLE 60 Query: 58 --WRSRLAQN----------LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE 105 +R R + G F+ ++S A LL S FLY + + Sbjct: 61 FDYRPRTSLQRIKEVRILRPYGSIPFDPVKS--AILLFLSEFLYYVTRG---------EQ 109 Query: 106 PCLELYDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTK 150 LY+ + + F + + L + IGF +L Sbjct: 110 QNAHLYNYVCASMEWLDEAERDYANFHLVFMMRLSRFIGFFPNLDA 155 >gi|331703463|ref|YP_004400150.1| DNA repair protein RecO [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802018|emb|CBW54172.1| DNA repair protein RecO [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 249 Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 8/163 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + N + + Sbjct: 1 MEKTLKGIVLNSFDFQDYDKIITIYSNLYGKISLVCLGVNKIKSKNKYGI-NYLSYSNFE 59 Query: 58 -WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++S+ NL + R E++ S +L+LY I L L E+ LY L Sbjct: 60 IFKSKNKFNLSKLKRSELINSFNNISTDFNLYLYA-NIITSLVLSLDEQIKNYNLYKTLK 118 Query: 116 IFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + ++ P + K+ V LK IG ++L+KC Sbjct: 119 LSISIINNKPDLGLKVCVLFMFYFLKIIGNQINLSKCGFCNSK 161 >gi|312127539|ref|YP_003992413.1| DNA repair protein reco [Caldicellulosiruptor hydrothermalis 108] gi|311777558|gb|ADQ07044.1| DNA repair protein RecO [Caldicellulosiruptor hydrothermalis 108] Length = 244 Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 8/174 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL----QAGNLVRVNWRSRL 62 I+L ++ E + IL V+T +G+ +N R+ +L Q R R Sbjct: 8 GIVLKETNFEESSKILTVLTSDFGKIQVLSKN--CRRLLSVLSAVSQPLMFCEFVIR-RT 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 V+ES +L +Y I + FL + ++ +L L K Sbjct: 65 KDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDTFLEFEQKNEDVLRLLLNSLYLLK 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 + E+ +L GF T+CV + S ++ G C Sbjct: 125 KGKDPEVVSRIFEIKILVYTGFFPQFTQCVKCQRKDITRAFFSFENSGLTCEKC 178 >gi|170725606|ref|YP_001759632.1| DNA repair protein RecO [Shewanella woodyi ATCC 51908] gi|169810953|gb|ACA85537.1| DNA repair protein RecO [Shewanella woodyi ATCC 51908] Length = 228 Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 7/145 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-MQPILQAGNLVRVNWRSRLA-Q 64 +L R + + ++++ ++ GR R G ++ ILQ + R + Sbjct: 4 GYVLHTRPFTDSSVLVNMLVDGQGRVDCVARLGSGKTSIKSILQPFQPLIFELSGRSNLK 63 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 NL R E + A +S + G + R + E++ + + L Sbjct: 64 NL--IRVE--SASPAVPISGEVSFAGFYLNELMVRCISVDHGAEEIFFVYHKTLMAMAA- 118 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLT 149 EL LLK IG L Sbjct: 119 GFCQSQLRYFELSLLKEIGLMPTLN 143 >gi|291546835|emb|CBL19943.1| DNA replication and repair protein RecO [Ruminococcus sp. SR1/5] Length = 252 Score = 43.6 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 53/156 (33%), Gaps = 8/156 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV----NWRSR 61 ++L G+ + + ++TR+ G+ F + + + P + A N + R Sbjct: 8 QGVVLSAMPVGDYDKRIVLLTRERGKISAFAKGAR-RQNSPFMAAANPFVFGSFTLYEGR 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + NL + + YG + F E E+ ++L + + Sbjct: 67 TSYNLNQVSVQ--HHFVELATRQPGVYYGYYFLELADYFGKEGTDEKEMMNLLYVTIKAI 124 Query: 122 KIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGV 156 P + ++ EL + G L +C G Sbjct: 125 LNPHIEDRLVRCIYELRTMVIQGVMPQLFQCAGCGR 160 >gi|270340241|ref|ZP_06007550.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270332128|gb|EFA42914.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 240 Score = 43.6 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVN 57 M + A++L +G+ +I++++TR+ GR + G+ + Q L+ + Sbjct: 1 MEVKTRALVLHALKFGDSQMIVDLLTREQGRVSFICYIPKTGRGKVKKQFFQPLTLLNLV 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PER--EPCLELYDM 113 + + +L F E+ S L Y L + + FL R + LYD Sbjct: 61 YTYKPNHSLQRFS-EISISQPYGSL--PFDAYKLSITLFISEFLTYATRGEQENTHLYDY 117 Query: 114 LNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDL------------ 160 + + S F + + L + IGF +L+ V G DL Sbjct: 118 IESSMMWLDNVSRSFANFHLVFMMHLSRFIGFFPNLSD-NVRGAWFDLRDGSFSLVCPSH 176 Query: 161 -LWVSPK 166 ++SPK Sbjct: 177 GDYLSPK 183 >gi|225619303|ref|YP_002720529.1| putative D repair protein recO [Brachyspira hyodysenteriae WA1] gi|225214122|gb|ACN82856.1| putative D repair protein recO [Brachyspira hyodysenteriae WA1] Length = 260 Score = 43.6 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 6/75 (8%) Query: 112 DMLNIFLNCHKIPSVIGKIFVQ-----IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 D L + + KI++ E+ L G L KC + G D+ + S Sbjct: 119 DALESLEEHYNDDKI-KKIYINILIRAFEMKTLHIAGISPHLDKCTICGNNNDISYYSIL 177 Query: 167 SGGAVCRSVGLPYAE 181 GG +C+ + Sbjct: 178 EGGLICQKCRNLIKD 192 >gi|218961362|ref|YP_001741137.1| hypothetical protein CLOAM1059 [Candidatus Cloacamonas acidaminovorans] gi|167730019|emb|CAO80931.1| hypothetical protein CLOAM1059 [Candidatus Cloacamonas acidaminovorans] Length = 251 Score = 43.6 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 10/189 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRSRLA 63 AI++ Y E ++IL+ TRQ G + + + L L+ + Sbjct: 7 AILIKQSQYSESSLILQYFTRQQGMISVIAKGIRKKNEKQQLLPLCEYELIAYEPK---E 63 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 Q L F + + + SSS + + + + +E +YD+ +L+ K Sbjct: 64 QGLWLFSEANITRNFSAYPSSSTWAAAETGLELISHLIISQEDIATIYDLTISYLDYLKK 123 Query: 124 PSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS-GGAVCRSVGLPY-- 179 IF + + G G L+ C + D+ K+ GG VC Sbjct: 124 VERNAILIFWRFLNRITILSGIGNPLSYCCLCKNPLDVPNAYLKTKGGFVCEKCLPEINP 183 Query: 180 AEKMLVLPS 188 +++L Sbjct: 184 DNALMILSP 192 >gi|295109869|emb|CBL23822.1| DNA replication and repair protein RecO [Ruminococcus obeum A2-162] Length = 250 Score = 43.6 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 70/206 (33%), Gaps = 35/206 (16%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA------GNLVRVNWR 59 +++ GE + + ++TR+ G+ F + + P + A GN Sbjct: 8 QGVVISAMPVGEYDKRIVLLTRERGKISAFAKGAR-RLNSPFMAAADPFVFGNFTLYE-- 64 Query: 60 SRLAQNLGEFR-----FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE----L 110 R + NL + E+ YG + F E E L Sbjct: 65 GRTSYNLNQVSVTHHFVELATMQPGVY-------YGYYFLELADYFGREGTDEKEMMNLL 117 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL-----LWVSP 165 Y + +N +I I+ EL + G L +C TG +++ + S Sbjct: 118 YVTVKALMNHQLDDRLIRCIY---ELRTMVEQGLCPQLFQC--TGCEKEISDSEDCFFSQ 172 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLW 191 + G +C S L + + PS L+ Sbjct: 173 EMHGILCISCALGKRDARRISPSALY 198 >gi|327382538|gb|AEA54014.1| DNA repair protein recO [Lactobacillus casei LC2W] gi|327385735|gb|AEA57209.1| DNA repair protein recO [Lactobacillus casei BD-II] Length = 259 Score = 43.6 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 74/196 (37%), Gaps = 18/196 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVRVNWRS 60 + +++ ++Y E +++++++T ++G+ + + ++ + IL Sbjct: 9 EGLVMSRQNYRESDMLVKILTDRFGKKMFLL--NRARKPGFTLGAGIL-PFTHADYIGEV 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLN--- 115 R L + + + +S + L Y + P+ P ++ + Sbjct: 66 R-ESGLSYLSA-IKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQAL 123 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 ++ P +I + E+ +LK G + CV+ G L S GG +C++ Sbjct: 124 YLIDSGLDPQIIANVI---EVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNH 180 Query: 176 GLPYAEKMLVLPSFLW 191 ++ P ++ Sbjct: 181 WDKDPHRLHASPRVIF 196 >gi|222111789|ref|YP_002554053.1| DNA repair protein Reco [Acidovorax ebreus TPSY] gi|254790520|sp|B9MDP4|RECO_DIAST RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|221731233|gb|ACM34053.1| DNA repair protein RecO [Acidovorax ebreus TPSY] Length = 262 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 3/129 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A +L + + ++ILE TR YGR + + +P+L +RV + Sbjct: 9 EPAYVLHSYDWSDSSLILETFTRHYGRVALVAKGAKKPTSNFRPVLLPLQPLRVTYTLGG 68 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + E ++ + L GL L R L + L+D + Sbjct: 69 EGHGEIHALKGAEWAGGHVMPTGDALLSGLYLNELLLRLLAREDTHAPLFDTYAGVVRVL 128 Query: 122 KIPSVIGKI 130 G+ Sbjct: 129 ATVDHEGEH 137 >gi|300813867|ref|ZP_07094172.1| DNA repair protein RecO [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512054|gb|EFK39249.1| DNA repair protein RecO [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 230 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 20/38 (52%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR 43 + I++ R +GE + IL++ T++ G + S + Sbjct: 9 EGIVIYERKHGESSKILKIFTKELGNISIMAKGSCSPK 46 >gi|282882452|ref|ZP_06291073.1| DNA repair protein RecO [Peptoniphilus lacrimalis 315-B] gi|281297594|gb|EFA90069.1| DNA repair protein RecO [Peptoniphilus lacrimalis 315-B] Length = 230 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 20/38 (52%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR 43 + I++ R +GE + IL++ T++ G + S + Sbjct: 9 EGIVIYERKHGESSKILKIFTKELGNISIMAKGSCSPK 46 >gi|319763843|ref|YP_004127780.1| DNA repair protein reco [Alicycliphilus denitrificans BC] gi|317118404|gb|ADV00893.1| DNA repair protein RecO [Alicycliphilus denitrificans BC] Length = 257 Score = 43.2 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 12/180 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A IL + E ++IL+V T YGR + + +P+L +R+ W Sbjct: 9 EPAYILHAYDWSESSLILDVFTCHYGRVALVAKGAKKPTSNFRPVLLPLQPLRLAWGLAG 68 Query: 63 AQNLGE-FRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDM---LNIF 117 GE + E +L + L GL L R L + +L+D+ + Sbjct: 69 EVGQGEIHTLKAAEWVGGHVLPTGDALLSGLYLNELLLRLLAREDTHAQLFDLYAGVVRV 128 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + + EL+LL+ IG L T L ++P+S A+ GL Sbjct: 129 LGSGAHGEALEPVLRAFELLLLREIGLLPALDAEPAT-----LGALAPQSRYALVAEGGL 183 >gi|229815235|ref|ZP_04445571.1| hypothetical protein COLINT_02281 [Collinsella intestinalis DSM 13280] gi|229809245|gb|EEP45011.1| hypothetical protein COLINT_02281 [Collinsella intestinalis DSM 13280] Length = 248 Score = 43.2 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 30/190 (15%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQP----------ILQA 50 ++ AI+L E ++IL ++ + + + + R+ +L Sbjct: 7 YRTKAIVLDKTKLKETDLILTLVDQAGRQVRAVAKGARKPGSRLAARCELCCEVDLLLAH 66 Query: 51 GNLVRVNWRSRLAQN-LGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL 108 G + + ++ L LG +E+L S A + Y E Sbjct: 67 GRSLDIVSQAELVAAPLGSQPSYELLMSASAVAEVARHCTY-------------EDAEDP 113 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFV--QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 ++ + L + LL +IG+ D + CV + + S Sbjct: 114 FVFAITRAVLAQLASLDAPHLDLIVAAYVFKLLSHIGYLPDCSSCVAC-EDEAPTYFSAH 172 Query: 167 SGGAVCRSVG 176 +GG +C S Sbjct: 173 AGGLLCASCA 182 >gi|118462249|ref|YP_881252.1| DNA repair protein RecO [Mycobacterium avium 104] gi|118163536|gb|ABK64433.1| DNA repair protein RecO [Mycobacterium avium 104] Length = 256 Score = 43.2 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 52/151 (34%), Gaps = 10/151 (6%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQNL 66 +L GE + I+ ++TR +G + + R + L+ + ++ Sbjct: 1 MLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHPGRNLDI 60 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIFLNCHKIP 124 + +++ ++S +++ L ER P L+ + L Sbjct: 61 VT-QVVSIDAFATDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVSALRAVADG 119 Query: 125 SVIGKIFVQIELMLLKNIGF---GLDLTKCV 152 + + + LL+ +G LT+C Sbjct: 120 RRSRDLLL--DAYLLRAMGIAGWAPALTECA 148 >gi|119485167|ref|ZP_01619552.1| DNA repair protein RecO [Lyngbya sp. PCC 8106] gi|119457395|gb|EAW38520.1| DNA repair protein RecO [Lyngbya sp. PCC 8106] Length = 303 Score = 43.2 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 7/125 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 + I L GE + +L ++T ++G + + R + L N + + + Sbjct: 5 YTATGINLKAIPLGESDRLLTILTPEHGLIRAVAPSARKPRSKLGGRSELFIVNQLLL-Y 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + R + + ++++S+ + + P EL+ +LN L Sbjct: 64 KGRSLDRI--TQADLIKSYGGLSQNLGKLSASQYLAEVVLSVALSEHPQEELFLLLNEHL 121 Query: 119 NCHKI 123 + + Sbjct: 122 DRLEH 126 >gi|83319326|ref|YP_424479.1| DNA repair protein RecO [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535681|sp|Q2SRY4|RECO_MYCCT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83283212|gb|ABC01144.1| DNA repair protein RecO [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 249 Score = 43.2 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 60/163 (36%), Gaps = 8/163 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + N + + Sbjct: 1 MEKTLKGIVLNSFDFRDYDKIITIYSNLYGKISLVCLGVNKTKSKNKYAI-NYLSYSNFE 59 Query: 58 -WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++++ L + R E++ S +L++Y + L L + L+ +L Sbjct: 60 IFKAKNKLGLSKLKRSELINSFSHIATDFNLYVYA-NVLTSLVMNLEDHMKNYNLFKILK 118 Query: 116 IFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + P++ K+ + LK IG ++LT C Sbjct: 119 LSIFLINSKPNISFKVCILFMFYFLKIIGNQINLTVCGFCNSK 161 >gi|295398007|ref|ZP_06808063.1| recombination protein O [Aerococcus viridans ATCC 11563] gi|294973765|gb|EFG49536.1| recombination protein O [Aerococcus viridans ATCC 11563] Length = 266 Score = 43.2 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 78/186 (41%), Gaps = 14/186 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSRLA 63 D I+L R Y EK++++++ T+++G+ + F++N Q++ ++ I +R ++ + Sbjct: 10 DGIVLFTRKYKEKDLLIKIFTKEFGKRMFFIKNIQRQNNGLREIAFP--YMRASFVGTIN 67 Query: 64 QNLGEF---RFEVL--ESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIF 117 F +VL ++ + + +++ Y F+ E + L+ L Sbjct: 68 DKGFSFLNDTDDVLFPKTTISDIQANAYAAYMTGLTDAAFEDFIKEDKVFDLLWHGLGK- 126 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + PSV+ I E+ LL G + C + G Q S + G +C Sbjct: 127 IEAGVDPSVVANI---FEIQLLPKFGVAPNFRSCAICGRDQGRFDYSMQYAGVLCEQHFH 183 Query: 178 PYAEKM 183 ++ Sbjct: 184 MDDRRL 189 >gi|282892069|ref|ZP_06300546.1| hypothetical protein pah_c205o108 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498111|gb|EFB40453.1| hypothetical protein pah_c205o108 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 225 Score = 43.2 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 22/189 (11%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQ-AGNLVRVNWRS 60 ++ + +IL + YGE N IL V +++ G FV+ + ++ L R Sbjct: 3 EFKVEGLILKMLPYGEGNHILNVFSKENGLISLFVK--KQKKISHFLISPLTHAEFVLRP 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PC---LELYDMLNI 116 + + E + S + L + ++ + L + P LYD+L Sbjct: 61 GKGE---LYPCEEI-SPLSSFLKIREKIESFEAAFHILNALTLSQYPHKSGPYLYDLLIR 116 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIG-FGLD----------LTKCVVTGVTQDLLWVSP 165 +L+ + L L++ G FGL C G SP Sbjct: 117 YLHEIPSSPNAQNLATSFLLKTLRHEGIFGLSEVCTTCQTLLGNTCYAYGGESYCFDHSP 176 Query: 166 KSGGAVCRS 174 A+ Sbjct: 177 SHAFALSPE 185 >gi|257063886|ref|YP_003143558.1| DNA repair protein RecO [Slackia heliotrinireducens DSM 20476] gi|256791539|gb|ACV22209.1| DNA repair protein RecO [Slackia heliotrinireducens DSM 20476] Length = 257 Score = 43.2 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 25/170 (14%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ------SHRMQ------PILQAGN 52 A+++ GE ++I+ ++ + + S R++ +L G Sbjct: 8 AHALVVRKTKLGETDLIVTLLADDGRLLRAVAKGARKPTSTFSSRIELFSVVDALLVEGR 67 Query: 53 LVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + + +RL R + + A + L L G+ + L +L+ Sbjct: 68 NLDILKEARLVDANLGIRESMERAAAASPI---LELAGIIAQPELV--------HPKLFS 116 Query: 113 MLNIFLNCHKIPSVIGKIFVQIE--LMLLKNIGFGLDLTKCVVTGVTQDL 160 L + + L + GF +CV G DL Sbjct: 117 CTVAGLKAACDADPAQTLSLSAACLLKVFSFAGFRPSFNECVKCGSKIDL 166 >gi|319900372|ref|YP_004160100.1| DNA replication and repair protein RecO [Bacteroides helcogenes P 36-108] gi|319415403|gb|ADV42514.1| DNA replication and repair protein RecO [Bacteroides helcogenes P 36-108] Length = 242 Score = 43.2 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II EV T GR V +S + + Q LV + Sbjct: 1 MLQKTQGIVLHTLKYKDTSIIAEVYTEVAGRASFMVPVPRSRKAVVKAVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRFEVLESH--CAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDML 114 + N ++ + +S + L L L+R + E L+ L Sbjct: 61 --ADFRPNASIYKIKEAKSSWPFSTLPYDPCKAAIALFLSEFLYRAVREEAENRPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + F + + L + +G +L Sbjct: 119 RHSIIWLDECREGFANFHLVFLMRLSRFLGLYPNLE 154 >gi|256851186|ref|ZP_05556575.1| DNA repair protein RecO [Lactobacillus jensenii 27-2-CHN] gi|260660610|ref|ZP_05861525.1| DNA repair protein RecO [Lactobacillus jensenii 115-3-CHN] gi|282934652|ref|ZP_06339895.1| DNA repair protein RecO [Lactobacillus jensenii 208-1] gi|297206051|ref|ZP_06923446.1| recombination protein O [Lactobacillus jensenii JV-V16] gi|256616248|gb|EEU21436.1| DNA repair protein RecO [Lactobacillus jensenii 27-2-CHN] gi|260548332|gb|EEX24307.1| DNA repair protein RecO [Lactobacillus jensenii 115-3-CHN] gi|281301227|gb|EFA93528.1| DNA repair protein RecO [Lactobacillus jensenii 208-1] gi|297149177|gb|EFH29475.1| recombination protein O [Lactobacillus jensenii JV-V16] Length = 251 Score = 43.2 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 61/173 (35%), Gaps = 8/173 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPIL--QAGNLVRVNWRSR 61 I+ + Y E +++ +++++ G VR +S +L GN + + Sbjct: 10 GIVFKRQRYKEADVLAKIISKDMGIFTMLVRGALRPKSKLSASVLAFSYGNYQVLTSQKG 69 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L+ ++ ++ +L Y + E + E Y+++ + L Sbjct: 70 LS---PLKTYKDIKQFSNLYSDLTLNSYACYLCDLVDHAFVEYQSLGEFYNLILVALTKL 126 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 I +EL +L G +C + G S +GG +C+ Sbjct: 127 NAGQDPEIICQLVELQMLAAYGVRPQFKQCAICGEIHGPFDYSISAGGVICQK 179 >gi|70726351|ref|YP_253265.1| hypothetical protein SH1350 [Staphylococcus haemolyticus JCSC1435] gi|82581563|sp|Q4L6R6|RECO_STAHJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|68447075|dbj|BAE04659.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 250 Score = 42.8 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 13/165 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG-RHLGFVRNGQSHR--MQPILQA---GNLV 54 M + II+ YGE + I+ ++ ++G + VR + + +Q Q G + Sbjct: 1 MLEKQKGIIIKSVDYGESDKIITIL-NEHGAKIPLMVRRAKKSKTGLQAHTQLFVYGLFI 59 Query: 55 RVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 W+ +G +V+ + L Y + R + + Y + Sbjct: 60 YNKWKG-----MGTLSSVDVINQYYDLRLDIFNSSYATLCTEAIERSMDNDDISPFHYKL 114 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 L+ L + + + L + GF ++ Sbjct: 115 LHFVLEKISNGDSAQLMSIIVLLKCMNRFGFTAFFNHSAISNSYD 159 >gi|254496977|ref|ZP_05109813.1| DNA repair protein recO [Legionella drancourtii LLAP12] gi|254353801|gb|EET12500.1| DNA repair protein recO [Legionella drancourtii LLAP12] Length = 204 Score = 42.8 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 48/136 (35%), Gaps = 8/136 (5%) Query: 23 EVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLL 82 TR++G + G++ + Q +LQA + + + F + +ES L Sbjct: 2 SFFTREFGLIHCLCKGGRTPKKQALLQAFTPSWLT----VDERYERFFVKTIESISPTLQ 57 Query: 83 SSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCH---KIPSVIGKIFVQIELML 138 L+ L L+ L P L+D LN K + + + E L Sbjct: 58 LVGHSLFSALYVNEILYHALSPHYPDTALFDAYLFTLNALVLTKDRLALESLLRRFEWTL 117 Query: 139 LKNIGFGLDLTKCVVT 154 LK G+ T T Sbjct: 118 LKVCGYSFSFTHEART 133 >gi|86135138|ref|ZP_01053720.1| recombination protein O [Polaribacter sp. MED152] gi|85822001|gb|EAQ43148.1| recombination protein O [Polaribacter sp. MED152] Length = 240 Score = 42.8 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 5/148 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI----LQAGNLVRVNWRSRL 62 AI+L YG+ ++I++ T++ G +R + + I Q +++ Sbjct: 8 AIVLSAIKYGDTSLIVKCYTQEEGIKTYMIRGVLKPKKKGITAAYFQPLTQLKIVANHNS 67 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L + +V + + + L L + E E LY+ L L Sbjct: 68 KNTLNSLKEVQVHQPYKTVYSNIVKQSVVLFLSEVLSNAIQEEEQNTTLYEYLETALQWL 127 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + L L +GF DL+ Sbjct: 128 DLHDNVANFHLLFLLNLTGFLGFYPDLS 155 >gi|332297730|ref|YP_004439652.1| DNA repair protein recO [Treponema brennaborense DSM 12168] gi|332180833|gb|AEE16521.1| DNA repair protein recO [Treponema brennaborense DSM 12168] Length = 269 Score = 42.8 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 30/174 (17%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L R GE N I+ +++ G + G+ +++ ++ W S Sbjct: 9 ALVLTSRQAGEDNRIITLLSPVLGVFDAMLYGGRKSKLRALVSP-------WHSGTVW-- 59 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGL------QSIVPLFRFLPEREPCLELY----DMLNI 116 + E +S ++F L L L + Y ++ Sbjct: 60 -LYTDESKKSIKITDFDPNVFRPSLRENLFKNMAASLATELAVKTKAAGEYGSCWTLVCA 118 Query: 117 FLNCHKIPSVIGKI--FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 FL+ + S ++ L +G D CV G SP +G Sbjct: 119 FLDGLEFSSEAEGRTGLLRFLWRYLGLLGVKPDADCCVRCG--------SPLTG 164 >gi|163816525|ref|ZP_02207889.1| hypothetical protein COPEUT_02715 [Coprococcus eutactus ATCC 27759] gi|158448225|gb|EDP25220.1| hypothetical protein COPEUT_02715 [Coprococcus eutactus ATCC 27759] Length = 247 Score = 42.8 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 26/186 (13%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L GE + + +T++ GR F R LQ+ + V Sbjct: 8 HGIVLSSSLQGEYDRRMVALTKERGRITVFATGV--RRGTNPLQSKTQMFV--------- 56 Query: 66 LGEFRFEV-----------LESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 +G F ++ + +L + + Y + E + + ++ Sbjct: 57 MGSFTLIPGRDSYRLVNIDVDEYFHQLTMDIDAYCYASYFCEVMSFMTHEGDRAADYLNL 116 Query: 114 LNIFLNCHKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 L + L + + ++ E+ L+ G G+ C + G T+ SGG + Sbjct: 117 LYVSLKALEKGQM-PAKLIRCVYEIKLMDVFGQGIQSFHCPICGKTEVSNVFDAASGGLL 175 Query: 172 CRSVGL 177 C Sbjct: 176 CDGCRG 181 >gi|328955431|ref|YP_004372764.1| DNA replication and repair protein RecO [Coriobacterium glomerans PW2] gi|328455755|gb|AEB06949.1| DNA replication and repair protein RecO [Coriobacterium glomerans PW2] Length = 266 Score = 42.8 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 26/194 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR-SRLAQ 64 I+L E ++IL ++ + + + R+ + V + R Sbjct: 12 IVLDKTRLAETDLILTLLAEDGRQIRAIAKGARRPGGRLAARCELACDVDLLLACGRSLD 71 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK-- 122 + E R A L L + L F E ++ + L+ Sbjct: 72 IVSEARMIASPLGAAPDLPVLAAASALTEVAKLNCF--EDAEDPFIFPITRCALDVAAAA 129 Query: 123 -----------IPSVIGKIFVQIEL-------MLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 P+ + ++L L+ ++G+ D T CV+ G T DL + S Sbjct: 130 GRRARSASGGVAPASDPLVAAHLDLIVAAYVFKLMSHMGYRPDCTACVLCGDT-DLTYFS 188 Query: 165 PKSGGAVCRSVGLP 178 +GG +C S Sbjct: 189 AAAGGLLCSSCAAS 202 >gi|312890249|ref|ZP_07749790.1| DNA repair protein RecO [Mucilaginibacter paludis DSM 18603] gi|311297361|gb|EFQ74489.1| DNA repair protein RecO [Mucilaginibacter paludis DSM 18603] Length = 241 Score = 42.8 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQA 50 M + I+ +YGE ++I++V T ++G V + R + +LQ Sbjct: 1 MLHKTRGIVFKTTNYGESSVIVQVYTEKFGLQSYIVNGVKKPRAKISRNMLQP 53 >gi|288800567|ref|ZP_06406025.1| DNA repair protein RecO [Prevotella sp. oral taxon 299 str. F0039] gi|288332780|gb|EFC71260.1| DNA repair protein RecO [Prevotella sp. oral taxon 299 str. F0039] Length = 241 Score = 42.8 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR---NGQSHRMQPILQA 50 M AI+L Y + +I++++T Q GR VR G S + Q Sbjct: 1 MLTNTSAIVLHSFKYKDNQMIVDMLTEQLGRISFIVRVGKKGSSATKRQFFQP 53 >gi|239631409|ref|ZP_04674440.1| DNA repair protein recO [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525874|gb|EEQ64875.1| DNA repair protein recO [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 259 Score = 42.8 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 80/211 (37%), Gaps = 20/211 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVRVNWRS 60 + +++ ++Y E +++++++T ++G+ + + ++ + IL Sbjct: 9 EGLVMSRQNYRESDMLVKILTDRFGKKMFLL--NRARKPGFTLGAGIL-PFTHADYIGEV 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLN--- 115 R L + + + +S + L Y + P+ P ++ + Sbjct: 66 R-ESGLSYLSA-IKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQAL 123 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 ++ P +I + E+ +LK G + CV+ G L S GG +C++ Sbjct: 124 YLIDSGLDPQIIANVI---EVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNH 180 Query: 176 GLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 ++ P F + T+D + ++ Sbjct: 181 WDKDPHRLHASPRAIFYLRRFSTLDLNKVER 211 >gi|149371051|ref|ZP_01890646.1| DNA repair protein [unidentified eubacterium SCB49] gi|149355837|gb|EDM44395.1| DNA repair protein [unidentified eubacterium SCB49] Length = 239 Score = 42.8 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 15/151 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNWRSRL 62 AI+L + YGE ++I T G +R + Q + + Sbjct: 7 AIVLSTKKYGEADLIATCYTASDGVKTYMLRGILKSKKGKIRASHFQLLTQLEIE----- 61 Query: 63 AQNLGEFRFEVLE----SHCAKLLSSSLFLYGLQSIVP--LFRFLPEREPCLELYDMLNI 116 A + + E L+ + + L + + L + L + E E LY+ ++ Sbjct: 62 ANHKNKGTLEYLKDAKIAVPYQTLHTDIVKSCLVMFLSEILTSTIREEESNNSLYNFISK 121 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L + L L +GF D Sbjct: 122 SLETLDHAEEFANFHIYFLLQLSTYLGFYPD 152 >gi|330836366|ref|YP_004411007.1| DNA repair protein RecO [Spirochaeta coccoides DSM 17374] gi|329748269|gb|AEC01625.1| DNA repair protein RecO [Spirochaeta coccoides DSM 17374] Length = 267 Score = 42.8 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 38/200 (19%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAG---------NLVRV 56 D I+L R G+ + L ++ G + + Q N VR Sbjct: 8 DGIVLRTRRMGDMHRRLSLLCPDLGIIDVIAYGARKGKRAMNAQMFSRSTFFLYHNPVRK 67 Query: 57 NWR---SRLAQ-NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL---E 109 + +R+ + G + S + + L R Sbjct: 68 EYTLKDARMESPHDG------VRSRLDSM-----------WAASFWSELCTRTAGGDWNA 110 Query: 110 LYDMLNIFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSP 165 L+ +L+ L+ + PS + + +Q LL G DLT+C V+ ++L S Sbjct: 111 LFLLLSECLDALEEDPSSVERASIQFVWHLLHLAGIAPDLTRCPVSERVYTHDEILGFSA 170 Query: 166 KSGGAVCRSVGLPYAEKMLV 185 R G + +L Sbjct: 171 SLLSPCSRENG-DVDDMLLP 189 >gi|227534996|ref|ZP_03965045.1| recombination protein RecO [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187387|gb|EEI67454.1| recombination protein RecO [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 259 Score = 42.8 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 80/211 (37%), Gaps = 20/211 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVRVNWRS 60 + +++ ++Y E +++++++T ++G+ + + ++ + IL Sbjct: 9 EGLVMSRQNYRESDMLVKILTDRFGKKMFLL--NRARKPGFTLGAGIL-PFTHADYIGEV 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLN--- 115 R L + + + +S + L Y + P+ P ++ + Sbjct: 66 R-ESGLSYLSA-IKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQAL 123 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 ++ P +I + E+ +LK G + CV+ G L S GG +C++ Sbjct: 124 YLIDSGLDPQIIANVI---EVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNH 180 Query: 176 GLPYAEKMLVLPS--FLWKEEQTIDADSLKS 204 ++ P F + T+D + ++ Sbjct: 181 WDKDPHRLHASPRAIFYLRRFSTLDLNKVER 211 >gi|291557708|emb|CBL34825.1| DNA repair protein RecO [Eubacterium siraeum V10Sc8a] Length = 254 Score = 42.4 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 19/172 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M +++G R GE + L++ T + G + + +G ++ Sbjct: 1 MLITLKGLVIGQRIIGENSCFLDLFTDKLGMIEVMAHGAKKIGGKN---SGAASLFSYAT 57 Query: 60 ---SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE-REPCLEL--YDM 113 SR ++ E + S + + L + ++ E +L + Sbjct: 58 FCVSRSSKGYTLNSAEPICS-FYNISADIEALSLAAYFADIIKYCATSEEEHEDLLRFTC 116 Query: 114 LNIF-LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 + F L K+P K E L IGF DL C + + + S Sbjct: 117 MTYFQLEKQKLPLRFIKAI--FEFRFLSRIGFMPDLRAC-----RECIAYKS 161 >gi|291530787|emb|CBK96372.1| DNA repair protein RecO [Eubacterium siraeum 70/3] Length = 254 Score = 42.4 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 19/172 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M +++G R GE + L++ T + G + + +G ++ Sbjct: 1 MLITLKGLVIGQRIIGENSCFLDLFTDKLGMIEVMAHGAKKIGGKN---SGAASLFSYAT 57 Query: 60 ---SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE-REPCLEL--YDM 113 SR ++ E + S + + L + ++ E +L + Sbjct: 58 FCVSRSSKGYTLNSAEPICS-FYNISADIEALSLAAYFADIIKYCATSEEEHEDLLRFTC 116 Query: 114 LNIF-LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 + F L K+P K E L IGF DL C + + + S Sbjct: 117 MTYFQLEKQKLPLRFIKAI--FEFRFLSRIGFMPDLRAC-----RECIAYKS 161 >gi|167749634|ref|ZP_02421761.1| hypothetical protein EUBSIR_00592 [Eubacterium siraeum DSM 15702] gi|167657387|gb|EDS01517.1| hypothetical protein EUBSIR_00592 [Eubacterium siraeum DSM 15702] Length = 254 Score = 42.4 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 19/172 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M +++G R GE + L++ T + G + + +G ++ Sbjct: 1 MLITLKGLVIGQRIIGENSCFLDLFTDKLGMIEVMAHGAKKIGGKN---SGAASLFSYAT 57 Query: 60 ---SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE-REPCLEL--YDM 113 SR ++ E + S + + L + ++ E +L + Sbjct: 58 FCVSRSSKGYTLNSAEPICS-FYNISADIEALSLAAYFADIIKYCATSEEEHEDLLRFTC 116 Query: 114 LNIF-LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 + F L K+P K E L IGF DL C Q + + S Sbjct: 117 MTYFQLEKQKLPLRFIKAI--FEFRFLSRIGFMPDLRAC-----RQCIAYKS 161 >gi|302344974|ref|YP_003813327.1| DNA repair protein RecO [Prevotella melaninogenica ATCC 25845] gi|302149782|gb|ADK96044.1| DNA repair protein RecO [Prevotella melaninogenica ATCC 25845] Length = 241 Score = 42.4 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR---NGQSHRMQPILQAGNLVRVN 57 M + AI+L +G+ +I+++ T GR R + + Q L+ + Sbjct: 1 MILKSKAIVLRSLKFGDSLLIIDMFTELEGRISFITRIPKTAKGKIKKQYFQPLTLLDLE 60 Query: 58 --WRSRLAQN----------LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE 105 +R R + G F+ ++S A LL S FLY + + Sbjct: 61 FDYRPRTSLQRIKEVRILRPYGSIPFDPVKS--AILLFLSEFLYYVTRG---------EQ 109 Query: 106 PCLELYDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTK 150 LY+ + + F + + L + IGF +L Sbjct: 110 QNAHLYNYICASMEWLDEAEHDYANFHLVFMMRLSRFIGFFPNLDA 155 >gi|226356336|ref|YP_002786076.1| DNA repair protein RecO (Recombination protein O) [Deinococcus deserti VCD115] gi|226318326|gb|ACO46322.1| putative DNA repair protein RecO (Recombination protein O) [Deinococcus deserti VCD115] Length = 247 Score = 42.4 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 53/184 (28%), Gaps = 28/184 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-----QSHRM------QPILQ-AGNLV 54 I++ R +II+ ++T Q G+ R G S I Q N + Sbjct: 10 GIVIRRRVTPAGDIIVTLLTPQ-GKLKAVARGGVRGPLASRLNLFHHVATQIYQGPHNDL 68 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++ L L E A L++ E E + +D+ Sbjct: 69 ASVKQAVLEGALPRLA-EPERYAFAHLMAEFA-----------DALFQEGEFSEQAFDLF 116 Query: 115 NIFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L P V + LL G +C G D P +G +C Sbjct: 117 AGALRGISHQPDPEWVALV-MSYKLLGLAGMVPQTARCARCG-QPDPAHPDPLAGQLLCA 174 Query: 174 SVGL 177 + Sbjct: 175 TCAA 178 >gi|284047994|ref|YP_003398333.1| DNA repair protein RecO [Acidaminococcus fermentans DSM 20731] gi|283952215|gb|ADB47018.1| DNA repair protein RecO [Acidaminococcus fermentans DSM 20731] Length = 248 Score = 42.4 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 88/252 (34%), Gaps = 33/252 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWR- 59 +QD+A+IL V+++ + R++G+ R Q ++Q +R+ Sbjct: 6 FQDEAVILRVKNWQTADKYAVCFCREHGKISFVAYGAAYPRSQSGRLVQPFAHLRLTLNP 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R +L E LE A + YG L E EP E++ +L L Sbjct: 66 GRKVASL--RGCESLEMPLA--MDWENLAYGAIIGEAAEHLLGEEEPQEEVFQLL---LE 118 Query: 120 CHKIPSVIGKIFV--QIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 ++ + V L LL G L +C G VT+D + S GG +C+ Sbjct: 119 AFRLLGKRNRRLVTDSTLLKLLALCGLNPILDQCTSCGESVTED-GYFSLVQGGFLCKKC 177 Query: 176 GLPYA-----------EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIH 224 + +++L L + D + L+++ L Sbjct: 178 AMGDELPFTVATRDLMDRLLHL-----DLQAPPDFTVRGRELMAMEKILHQFILYQTDRP 232 Query: 225 CHLLRENFLGKL 236 L FL K+ Sbjct: 233 LRSL--EFLAKM 242 >gi|17231667|ref|NP_488215.1| DNA repair protein RecO [Nostoc sp. PCC 7120] gi|20139486|sp|Q8YPL9|RECO_ANASP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|17133310|dbj|BAB75874.1| alr4175 [Nostoc sp. PCC 7120] Length = 296 Score = 42.4 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 76/210 (36%), Gaps = 28/210 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 ++ I L ++ GE + I+ ++T+++G + H + + N + + Sbjct: 5 YKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKHNSSLGGRSAMFVVNELLIA- 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + R + + + AK L L IV L + L E +P ELY++LN L Sbjct: 64 KGRSLDKITQAQTIKTYPGLAKDLGKLAASQYLAEIV-LCQALSE-QPQEELYELLNEHL 121 Query: 119 NCHKI----PSVIGKIFVQIEL-MLLKNIGFGLDLTKCVVTGVTQDLLWVSPK------- 166 + + S ++ + LL G + C +T + + P Sbjct: 122 HRLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICCLTQRSLTPDFADPNWRVGFSI 181 Query: 167 -SGGAVC--------RSVGLPYAEKMLVLP 187 SGG VC + EK L P Sbjct: 182 ASGGIVCLEAWEGLRKEARKESKEKSLPHP 211 >gi|237785900|ref|YP_002906605.1| DNA repair protein RecO [Corynebacterium kroppenstedtii DSM 44385] gi|237758812|gb|ACR18062.1| DNA repair protein RecO [Corynebacterium kroppenstedtii DSM 44385] Length = 266 Score = 42.4 bits (99), Expect = 0.056, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 64/198 (32%), Gaps = 24/198 (12%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-- 57 ++D A+++ + E + I+ ++TR++G + + ++ + L +V V Sbjct: 4 NYRDRALVVRHYDFSEADRIVVLLTREHGVVRAVAKGVRKNKSRFGGRLAPFVVVDVQLY 63 Query: 58 -WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP---------- 106 R LA E + S+ ++ S +++ + L E Sbjct: 64 VGRGSLAT---LTSAETVRSYNQLIVDSYAKYTAACAVLDVAEKLTVGEEATLCDDAAAA 120 Query: 107 -----CLELYDMLNIFLNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDL 160 D + + V + L L G+ L C G Sbjct: 121 IRDIAHSWPVDSAAQGEQSSVRGEGLPTLRVDKFVLRALAAEGWEPQLFSCAGCGQPGPH 180 Query: 161 LWVSPKSGGAVCRSVGLP 178 S GGAVC + P Sbjct: 181 HAFSASIGGAVCGACRPP 198 >gi|227498621|ref|ZP_03928765.1| DNA repair protein recO [Acidaminococcus sp. D21] gi|226904077|gb|EEH89995.1| DNA repair protein recO [Acidaminococcus sp. D21] Length = 247 Score = 42.4 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 66/192 (34%), Gaps = 20/192 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRS 60 +QD+A+IL VR++ + R +G+ + I+Q +RV Sbjct: 6 FQDEAVILEVRNWQTADKYAVCFCRHHGKVPFIAYGAAYPKSTSGRIVQPFAQLRVTL-- 63 Query: 61 RLAQNLGEFRFEVLESH----CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + L ++ YG + + E EP E + ++ Sbjct: 64 -----MPGRKVATLRGCEFMNLPHVMDIEGMAYGAIIAEAVMQLFEEEEPLEEAFFLICQ 118 Query: 117 FLNCHKIPSVIGKIFVQIEL-MLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRS 174 P+ ++ L LL GF L C G ++ + SP GG +CR Sbjct: 119 AFTLF--PNHNKRLVTDSTLFKLLALCGFDPVLDYCTTCGKPMEEDGYFSPVQGGFLCRD 176 Query: 175 VGLPYAEKMLVL 186 L + L L Sbjct: 177 CALDHD---LPL 185 >gi|213963746|ref|ZP_03391996.1| DNA repair protein RecO [Capnocytophaga sputigena Capno] gi|213953626|gb|EEB64958.1| DNA repair protein RecO [Capnocytophaga sputigena Capno] Length = 238 Score = 42.4 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 9/154 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYG----RHLGFVRNGQSHRMQPILQAGNLVRV 56 MY + +AI++ Y + ++I++ T+ G G + ++ + + Q L+ + Sbjct: 1 MYEKVEAIVISNLKYSDNSLIVKCFTKTLGTRSYLQQGILSAKKNSQTIALFQPFTLLEL 60 Query: 57 NWRSRLAQNLG---EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + +LG E + + S L I P +EL++ Sbjct: 61 VATHKSNGSLGRIKEAKVTTPYLSLHTDIYKSTVSLFLSEICANICT--SEAPDIELFNY 118 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L L ++ L L K +GF D Sbjct: 119 LEEKLIYLDRNEFSANFHLKFLLDLSKYLGFYPD 152 >gi|325681541|ref|ZP_08161066.1| DNA repair protein RecO [Ruminococcus albus 8] gi|324106808|gb|EGC01099.1| DNA repair protein RecO [Ruminococcus albus 8] Length = 251 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 13/232 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNW----RSR 61 ++L GE + + V+T + G +VR G+ S + QA + + + ++ Sbjct: 6 GLVLKEIDSGESSKSICVLTAELGVIYIYVRGGRKSGKTASSTQALSYSTLCFEEKRNAK 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E ++ L + L E E E+ + L+ Sbjct: 66 GQVSRYLNSSEPVKLFYNIRLDAKKVALAAYFSEMLIYCGTEGEDHTEVLRLALNSLHFL 125 Query: 122 KIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLPY 179 + ++ E LL IG L C + + ++ C Sbjct: 126 NEDKMDPELLKCVFEFRLLCEIGLRPGLVGCANCFSYESEPMYFDFDRNCLECADCCQDA 185 Query: 180 AEK-MLVLPS---FLWKEEQTIDADSLKSAFQLTDYFLNK-YALQHNIIHCH 226 + ++ L +L + D + L F+++D +L K I CH Sbjct: 186 ENRGLMALDKTMLYLVRFIALTDYERLFY-FKISDRYLEKLNFFTERFIACH 236 >gi|313905843|ref|ZP_07839201.1| DNA repair protein RecO [Eubacterium cellulosolvens 6] gi|313469357|gb|EFR64701.1| DNA repair protein RecO [Eubacterium cellulosolvens 6] Length = 215 Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV 56 ++L GE + + ++TR+ GR F R + + GN + Sbjct: 9 GMVLSASPVGENDKRVVLLTRELGRISAFARGAR--------RPGNQLMA 50 >gi|303245473|ref|ZP_07331757.1| DNA repair protein RecO [Desulfovibrio fructosovorans JJ] gi|302493322|gb|EFL53184.1| DNA repair protein RecO [Desulfovibrio fructosovorans JJ] Length = 249 Score = 42.1 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 9/90 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNW 58 M + + A++L V + E + + + + G + F G R + + L N VR Sbjct: 1 MEFSEQALVLKVGRFREIDAWVRLFSPVRGGYTAFAFGGMKSRRRFLGCLDPLNHVRFKV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFL 88 R G + A+LL + L Sbjct: 61 R---RSGRGGYHC----LTEARLLDAPTNL 83 >gi|283850612|ref|ZP_06367899.1| Recombination protein O RecO [Desulfovibrio sp. FW1012B] gi|283573855|gb|EFC21828.1| Recombination protein O RecO [Desulfovibrio sp. FW1012B] Length = 250 Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 14/93 (15%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNW 58 M + + A++L V + E + + + + G + F G R + + L A N VR Sbjct: 1 MEFSEKALVLKVGRFREIDAWVRLFSPVRGLYTAFAFGGMKSRRRFLGCLDAFNHVRFKV 60 Query: 59 R------------SRLAQNLGEFRFEVLESHCA 79 R ++L R E A Sbjct: 61 RRSGYRGYHCLTEAKLLDAPRVLRTEPARLGMA 93 >gi|282859417|ref|ZP_06268523.1| DNA repair protein RecO [Prevotella bivia JCVIHMP010] gi|282587815|gb|EFB93014.1| DNA repair protein RecO [Prevotella bivia JCVIHMP010] Length = 241 Score = 42.1 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 22/37 (59%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR 37 M + AI+L YG+ ++I++++T + GR VR Sbjct: 1 MLQKTKAIVLHSLKYGDSSLIIDLLTEEEGRLTFIVR 37 >gi|258508544|ref|YP_003171295.1| DNA repair protein recO [Lactobacillus rhamnosus GG] gi|257148471|emb|CAR87444.1| DNA repair protein recO [Lactobacillus rhamnosus GG] Length = 259 Score = 42.1 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 8/201 (3%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQNLG 67 + ++Y E +++++++T Q+G+ + V + + + R L Sbjct: 1 MSRQNYRESDMLVKILTDQFGKKMFLVNRARKPGFTLAAGILPFTHADYIGEVR-DSGLS 59 Query: 68 EFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + +S+ + L Y L P+ P + + L+ Sbjct: 60 YLSA-IKNPTQYRQISNDITLNAYAAYIFGLLDLAFPDGRPVGFWFKQVKQALHLIDTGL 118 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 I +E+ +LK G + CV+ G T L S GG +C+ ++ Sbjct: 119 DPQIIANVVEVQMLKAYGVEPNWRGCVIDGRTDLPLDFSESYGGLLCQQHWDKDPHRLHA 178 Query: 186 LPS--FLWKEEQTIDADSLKS 204 P F + T+D +K Sbjct: 179 SPRAIFYLRRFSTLDLSQVKR 199 >gi|312135209|ref|YP_004002547.1| DNA repair protein reco [Caldicellulosiruptor owensensis OL] gi|311775260|gb|ADQ04747.1| DNA repair protein RecO [Caldicellulosiruptor owensensis OL] Length = 244 Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 8/174 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL----QAGNLVRVNWRSRL 62 I+L ++ E + IL V+T +G+ +N R+ +L Q + + Sbjct: 8 GIVLKETNFEESSKILTVLTSDFGKIQVLSKN--CRRLLSVLSAVSQPLMFCEFVIK-KT 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 V+ES + +L +Y I + FL + ++ +L L K Sbjct: 65 KDIYSISSASVIESFFELSQNVNLAIYSGYLIELVDDFLEFEQKNEDVLRLLLNSLYLLK 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 ++ E+ +L GF T+CV + S K+ G C Sbjct: 125 KGKDPEEVSRIFEIKILVYTGFFPQFTQCVKCQRKDITRAFFSFKNSGLTCEKC 178 >gi|257468593|ref|ZP_05632687.1| DNA repair protein recO [Fusobacterium ulcerans ATCC 49185] gi|317062850|ref|ZP_07927335.1| DNA repair protein recO [Fusobacterium ulcerans ATCC 49185] gi|313688526|gb|EFS25361.1| DNA repair protein recO [Fusobacterium ulcerans ATCC 49185] Length = 237 Score = 42.1 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 M + D I++ + +GE + + + T +G+ V+ + + + Sbjct: 1 MKFFDSNGIVINKKDFGEADRYITIFTETFGKVNVLVKGIRKSKKR 46 >gi|260910951|ref|ZP_05917592.1| recombination protein O [Prevotella sp. oral taxon 472 str. F0295] gi|260634942|gb|EEX52991.1| recombination protein O [Prevotella sp. oral taxon 472 str. F0295] Length = 242 Score = 42.1 bits (98), Expect = 0.076, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 15/159 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGR---HLGFVRNGQSHRMQPILQAGNLVRVN 57 M + AI+L YG+ +I +++T +GR R ++ + + Q L+ + Sbjct: 1 MLVKTHAIVLRSLKYGDSQLITDLLTEAFGRVSFVSSIPRTQKAKIKKQLFQPLTLLEIE 60 Query: 58 WRSRLAQNLGEFRFEVLE----SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE--LY 111 + + R + L ++ + S + V F R+ LY Sbjct: 61 F-----DHRPNARLQRLRDARMTYPFTSIPYSEAKLAIALFVAEFLSHATRDEQQNVSLY 115 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + + F + + L + +GF +L Sbjct: 116 KYVETSVRWLDGAQHAFANFHLAFMIRLSRFLGFYPNLD 154 >gi|320335056|ref|YP_004171767.1| DNA repair protein recO [Deinococcus maricopensis DSM 21211] gi|319756345|gb|ADV68102.1| DNA repair protein recO [Deinococcus maricopensis DSM 21211] Length = 244 Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 57/185 (30%), Gaps = 34/185 (18%) Query: 7 AIIL--GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQ---------AGN 52 I++ V G+ +IL ++T Q G+ G R G + + Q N Sbjct: 10 GIVIRRAVMPAGD--VILTLLTPQ-GKVKGIARGGARGALMSRLNLFQHLAVQLYQTPNN 66 Query: 53 LVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 + ++ L L E A LL+ E E + ++ Sbjct: 67 DLATIQQATLEGALPRLS-EPERYPLAHLLAE-----------LADALFQEGEHSEQAFE 114 Query: 113 MLNIFLN--CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 + L + + + LL GF +C G D + SG Sbjct: 115 LFAAALRGVAFQPDPEWVALVMSY--KLLAFAGFVTRAERCARCGAA-DPTGLDALSGHV 171 Query: 171 VCRSV 175 VCR+ Sbjct: 172 VCRAC 176 >gi|239814411|ref|YP_002943321.1| DNA repair protein RecO [Variovorax paradoxus S110] gi|259563686|sp|C5CSF7|RECO_VARPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|239800988|gb|ACS18055.1| DNA repair protein RecO [Variovorax paradoxus S110] Length = 257 Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPI 47 + A +L + E ++ILEV TR +GR + + S +P+ Sbjct: 9 HEPAYVLHRYDWSESSLILEVFTRHHGRIALVAKGAKRPSSNFRPV 54 >gi|163784120|ref|ZP_02179065.1| Recombinational DNA repair protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880611|gb|EDP74170.1| Recombinational DNA repair protein [Hydrogenivirga sp. 128-5-R1-1] Length = 230 Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVR 55 +D+AI+L S G ++ + V T+ +G+ +++ GQ + P LQ N ++ Sbjct: 5 KDEAIVLRSSSSGTNDLSITVFTKGFGKENIYIKGGQILKNMYLPKLQPFNWIK 58 >gi|255994491|ref|ZP_05427626.1| DNA repair protein RecO [Eubacterium saphenum ATCC 49989] gi|255993204|gb|EEU03293.1| DNA repair protein RecO [Eubacterium saphenum ATCC 49989] Length = 256 Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 79/235 (33%), Gaps = 22/235 (9%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 ++ +AI+L ++ ++TR + L S + ILQ + Sbjct: 3 EFEIEAIVLRCIKMTGGRNLVTLLTRDDKKILASAYGSGSSKGGDANILQPMSKSIFQI- 61 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + ++++ + +I + +PE Y+ L+ FL+ Sbjct: 62 -KQNRYYNVLKVDLIDYPMEIASDIEKLAVAMFAIEITDKVIPENSGEHGAYNHLSSFLD 120 Query: 120 CHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG-------GAV 171 + IF + + +L G + + V + + S KSG A Sbjct: 121 AARRRESEYAIFPIYYFIKILTMTGVFV-INNEVFLDAANESCYFSLKSGKTYETYKKAK 179 Query: 172 CRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT----DY-----FLNKYA 217 G Y +L + S + + + + +LT + FL +YA Sbjct: 180 TEIGGGYYDSLILKVSSDIINTVRYLANADISKVGELTIPDDKFNEYWMFLRRYA 234 >gi|254411982|ref|ZP_05025757.1| DNA repair protein RecO [Microcoleus chthonoplastes PCC 7420] gi|196180948|gb|EDX75937.1| DNA repair protein RecO [Microcoleus chthonoplastes PCC 7420] Length = 289 Score = 41.7 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 21/168 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPI--LQAGNLVRVNW 58 + I L GE + ++ ++T ++G + ++ L N + + + Sbjct: 5 YNATGINLKSMPLGEADRLVTILTPEWGLIRVVAPGSRKQNSKLAGRMGLFVVNQL-LIY 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV--PLFRFLPEREPCLELYDMLNI 116 + R + + E LES+ L L Q + L L E +P ELY + N Sbjct: 64 KGRSLDKI--TQAETLESYPG-LAKDLGKLAASQYLAELVLCHALSE-QPQAELYALFNE 119 Query: 117 ----------FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + H S++ Q LL G + +C ++ Sbjct: 120 HLRRLEQLPPLSSSHSGTSLLLAHLCQGIFHLLALAGIAPQVQQCCIS 167 >gi|255010095|ref|ZP_05282221.1| DNA repair protein RecO [Bacteroides fragilis 3_1_12] gi|313147890|ref|ZP_07810083.1| DNA repair protein [Bacteroides fragilis 3_1_12] gi|313136657|gb|EFR54017.1| DNA repair protein [Bacteroides fragilis 3_1_12] Length = 242 Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L + Y + + I+E+ T GR V +S + + Q L+ Sbjct: 1 MLQKTVGIVLHILKYNDTSNIVEMYTELSGRASFLVAVPRSKKAAVKSVLFQPLALIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R +L FR + +S + L L+R + E L+ L Sbjct: 61 ADYRPNTSL--FRIKEAKSFSPFASIPYDPFKSAIALFLAEFLYRAIREEAENRPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + + F + + L + +G +L Sbjct: 119 QHSILWLDACKISFANFHLVFLMRLSRFLGLYPNLD 154 >gi|213859105|ref|ZP_03385076.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 46 Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 19/37 (51%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR 43 A +L R + E +++L+ T + GR + +S R Sbjct: 3 AFVLHSRPWSETSLMLDAFTEESGRVRLVAKGARSKR 39 >gi|88802003|ref|ZP_01117531.1| DNA repair protein [Polaribacter irgensii 23-P] gi|88782661|gb|EAR13838.1| DNA repair protein [Polaribacter irgensii 23-P] Length = 240 Score = 41.7 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 5/149 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRVNWRSRL 62 AI+L Y + ++I++ T + G ++ + Q + + Sbjct: 8 AIVLNSLKYSDTSLIVKCYTAEEGLKAYIIKGVLKAKKGGIKAAYFQPLTQLNLVANHST 67 Query: 63 AQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +L + ++L + L L + E E + Y+ L L Sbjct: 68 KSSLHTLKEVQILNPYKTIFRDIVKQSVVLFISEVLSNSIQEEEKNTDFYNYLEAALIWL 127 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 I + L + +GF D+++ Sbjct: 128 DAHDKISNFHLLFLLNASRFLGFYPDISE 156 >gi|213859493|ref|ZP_03385197.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 160 Score = 41.7 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%) Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 28 FFDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 77 >gi|88858202|ref|ZP_01132844.1| DNA repair protein recO (Recombination protein O) [Pseudoalteromonas tunicata D2] gi|88819819|gb|EAR29632.1| DNA repair protein recO (Recombination protein O) [Pseudoalteromonas tunicata D2] Length = 210 Score = 41.7 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 9/133 (6%) Query: 22 LEVMTRQYG--RHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCA 79 L+++ G R L ++ Q+ + LQ + + + + L L S+ A Sbjct: 2 LDMLVENLGQIRLLARLKGKQAVKHSAQLQPFQTLLIRFSGQGD--LKYLTQFELASNIA 59 Query: 80 KLLSSSLFLYG---LQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIEL 136 + + LY L + R +P EP Y + L + + E Sbjct: 60 DIQLAGKALYCGFYLNELCN--RIIPINEPIDLAYQLYQQHLQALTTSCDVEQTLRSFEY 117 Query: 137 MLLKNIGFGLDLT 149 LL+ +G+G+D Sbjct: 118 QLLELLGYGVDFN 130 >gi|300775773|ref|ZP_07085634.1| recombination protein O [Chryseobacterium gleum ATCC 35910] gi|300505800|gb|EFK36937.1| recombination protein O [Chryseobacterium gleum ATCC 35910] Length = 228 Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVN 57 +L YGE + +L T + G F++ + ++ + +LQ + + + Sbjct: 6 GFLLSFIKYGENDAVLHCFTEEEGFQSYFLKGIYAKRNKKKALLQPLSQLNFS 58 >gi|196232564|ref|ZP_03131416.1| DNA repair protein RecO [Chthoniobacter flavus Ellin428] gi|196223326|gb|EDY17844.1| DNA repair protein RecO [Chthoniobacter flavus Ellin428] Length = 177 Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 5/141 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-RSRLA 63 AI+L E ++I+ T G+ + + R +L + + RSR + Sbjct: 6 AILLRKTKLTETSLIVTWFTEANGKIQTVAKGARQPKSRFAGLLDLFFDCEIQFMRSRKS 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNCHK 122 + L R VL + L + V L + E + P EL+D+L Sbjct: 66 E-LHILREVVLRNPHEGLRLDYTRVALAAYFVELIELVTEPDHPARELHDLLMRAFGHLN 124 Query: 123 IPSVIGKIFVQIELMLLKNIG 143 K + E L + +G Sbjct: 125 EKPASLKALLHFESELARLLG 145 >gi|237736617|ref|ZP_04567098.1| DNA repair protein recO [Fusobacterium mortiferum ATCC 9817] gi|229420479|gb|EEO35526.1| DNA repair protein recO [Fusobacterium mortiferum ATCC 9817] Length = 238 Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 22/42 (52%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 D+ I++ R +GE + + V T +G+ + ++ + + + Sbjct: 6 NDNGIVINKRDFGEADRYVSVFTENFGKLVFLLKGIRKSKKR 47 >gi|300023173|ref|YP_003755784.1| extracellular solute-binding protein family 5 [Hyphomicrobium denitrificans ATCC 51888] gi|299524994|gb|ADJ23463.1| extracellular solute-binding protein family 5 [Hyphomicrobium denitrificans ATCC 51888] Length = 598 Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Query: 48 LQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYG-----LQSIVPLFRFL 101 L GN W ++ A G F F +++ A + +++ + S+ L R L Sbjct: 496 LSPGNEQLFRWSAKTADAQGSFNFAGVKNPAADAMINAMLAAETEENFISSVRALDRVL 554 >gi|77408837|ref|ZP_00785565.1| recombination protein O [Streptococcus agalactiae COH1] gi|77172568|gb|EAO75709.1| recombination protein O [Streptococcus agalactiae COH1] Length = 88 Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 24/44 (54%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA 50 ++L R+Y E + ++++ T G+ + FV++ + +LQ Sbjct: 8 GLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQP 51 >gi|319792227|ref|YP_004153867.1| DNA repair protein reco [Variovorax paradoxus EPS] gi|315594690|gb|ADU35756.1| DNA repair protein RecO [Variovorax paradoxus EPS] Length = 257 Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPI 47 + A +L + E ++ILEV TR +GR + + S +P+ Sbjct: 9 HEPAYVLHRYDWSESSLILEVFTRHHGRIALVAKGAKRPSSNFRPV 54 >gi|184200938|ref|YP_001855145.1| DNA repair protein RecO [Kocuria rhizophila DC2201] gi|183581168|dbj|BAG29639.1| DNA repair protein RecO [Kocuria rhizophila DC2201] Length = 252 Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 75/220 (34%), Gaps = 15/220 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-R 59 ++DDA++L + GE + I+ +++ Q+G+ + + + R L+ N+ V Sbjct: 11 YRDDAVVLRTYTLGEADRIVILLSAQHGQVRAVAKGVRRTTSRFGARLEPFNVAEVQLVH 70 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL---YDMLNI 116 R + + S+ +++S ++ L + Y +L Sbjct: 71 GRSLDIVSQAI--GKRSYGERIVSDYERFTAAAAMAETAERL-TADDHDTAAQHYRLLVG 127 Query: 117 FLNCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ +I L + G+ C G S GGAVC Sbjct: 128 ALSATARGLHRPGRILDSYLLRAVSLAGWTPSFVDCARCGAPGPHRSFSAPLGGAVCPQC 187 Query: 176 -----GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTD 210 P ++L L + TIDA ++A Sbjct: 188 RPPGSAAPSDATFVLLNGLLHGDWPTIDAADPRTARDAAG 227 >gi|213029338|ref|ZP_03343785.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 121 Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%) Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 +D LN + EL LL ++G+G++ T C +G D Sbjct: 10 FFDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVD 59 >gi|94984962|ref|YP_604326.1| DNA repair protein RecO [Deinococcus geothermalis DSM 11300] gi|94555243|gb|ABF45157.1| DNA repair protein RecO [Deinococcus geothermalis DSM 11300] Length = 243 Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 67/240 (27%), Gaps = 40/240 (16%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGF----VRNGQSHRMQPILQAGNLVRVNWRSRL 62 I++ R +II+ ++T Q G+ VR S R+ + ++ L Sbjct: 10 GIVIRRRVTPAGDIIVTLLTPQ-GKVKAIARGGVRGALSSRLNLFHHVAIQLYQTPQADL 68 Query: 63 --------AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 L + E A L++ E E + +++ Sbjct: 69 ATVQQTVLEGALPKLA-EPERYAFAHLMAE-----------LADALFQEGEFSEQAFELF 116 Query: 115 NIFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L P V + LL GF +C G P G +C Sbjct: 117 AGALRGISHQPDPEWVALV-MSYKLLGLAGFVPQTGRCARCGAA-APTHPDPLGGQLLCG 174 Query: 174 SVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 + + P + + S+++ +++ + E F+ Sbjct: 175 ACA-----SLPAYPPEGLDFLRNVVRRSVRAN-------MDRPVPEEQRPALWRALERFV 222 >gi|227500711|ref|ZP_03930760.1| DNA repair protein RecO [Anaerococcus tetradius ATCC 35098] gi|227217169|gb|EEI82518.1| DNA repair protein RecO [Anaerococcus tetradius ATCC 35098] Length = 255 Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 69/200 (34%), Gaps = 25/200 (12%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR-LAQN 65 IL Y E + I+EV T + G+ R N +++ R + N Sbjct: 11 GFILREFPYHETSKIVEVFTDKLGKVSILARGVYRK---------NSDKLSLTGRFMKVN 61 Query: 66 LGEFR----------FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 L ++ EVLE++ + + LY L + + E + ++ +L+ Sbjct: 62 LSLYKSGKDFYGIREGEVLENYKKSQKNFDVILYKSAICDFLLKTMDETQI-DTVFKLLD 120 Query: 116 IFLNCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVC 172 + IF+ + + G + + C + G + + S + +C Sbjct: 121 TSFRAFEEAEKNYINIFLAFMIKYISFSGLKPNFSTCGICGKIIDNGNNFFSIEEASVIC 180 Query: 173 RSVGLPYAEKM-LVLPSFLW 191 +++ L FL+ Sbjct: 181 EDDKKKALDRIFLSYDEFLY 200 >gi|160915034|ref|ZP_02077247.1| hypothetical protein EUBDOL_01042 [Eubacterium dolichum DSM 3991] gi|158432833|gb|EDP11122.1| hypothetical protein EUBDOL_01042 [Eubacterium dolichum DSM 3991] Length = 247 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 11/174 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ---SHRMQPILQAGNLVRVNWRSRLA 63 AI++ R Y E + I++++ G + G + + Q R R + Sbjct: 7 AIVISYREYREHDAIIKLLDEN-GTISSLIARGVQKINSKNAAGCQQFTYGRYFVNERQS 65 Query: 64 QNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLNCH 121 L E L ++ LY +QSI + + + + + +L L Sbjct: 66 TVLHSLCSAECLRTY----RDIREDLY-MQSIASYMCEVIEKSDFEENAFPLLKTMLEHL 120 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + ++ + G + CV G T+ + +S ++GG +C+S Sbjct: 121 SKKEQPFGVLCLFQAIVNRMHGIEPCVEGCVHCGTTKRIASISVQAGGFLCQSC 174 >gi|75906952|ref|YP_321248.1| DNA repair protein RecO [Anabaena variabilis ATCC 29413] gi|123610555|sp|Q3MF83|RECO_ANAVT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|75700677|gb|ABA20353.1| DNA replication and repair protein RecO [Anabaena variabilis ATCC 29413] Length = 296 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 75/209 (35%), Gaps = 26/209 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW---R 59 ++ I L ++ GE + I+ ++T+++G + + ++G V + Sbjct: 5 YKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKYNSSLGGRSGMFVVNELLIAK 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + + AK L L IV L + L E +P ELY++LN L+ Sbjct: 65 GRSLDKITQAQTIKTYPGLAKDLGKLAASQYLAEIV-LCQALSE-QPQEELYELLNEHLH 122 Query: 120 CHKI----PSVIGKIFVQIEL-MLLKNIGFGLDLTKCVVTGVTQDLLWVSPK-------- 166 + S ++ + LL G + C +T +V P Sbjct: 123 RLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICCLTQRLLTPNFVDPNWRVGFSIA 182 Query: 167 SGGAVC--------RSVGLPYAEKMLVLP 187 +GG VC + EK L P Sbjct: 183 AGGIVCLEAWEGLRKEAQKESREKSLPHP 211 >gi|326576292|gb|EGE26207.1| DNA repair protein RecO [Moraxella catarrhalis CO72] Length = 269 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 24/164 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-QPI---------LQAGNLVRV 56 +L R Y EK I + + + G G G+ + PI L++ + + Sbjct: 8 GYLLHQRPYQEKRAIYQFFSYEKGVVHGI--GGRGMPLFTPIWLMSSGTKSLKSFGQISL 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAK-LLSSSLFLYGLQSIVPLFRFLPEREPCLELY---- 111 + + L E + L++ + L L + L PC +L+ Sbjct: 66 GFSDEFVRQLTAQSNEAAYHPASYGLMTGRVQYALLYMNEILDKLLATESPCPKLWQVYH 125 Query: 112 ------DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDL 148 L+ K++++ E L +G +D Sbjct: 126 TNMTKLHALDRLSLMAVDKMQAMKLYLRSFERGLFSELGVMMDF 169 >gi|238853404|ref|ZP_04643783.1| DNA repair protein RecO [Lactobacillus gasseri 202-4] gi|238833976|gb|EEQ26234.1| DNA repair protein RecO [Lactobacillus gasseri 202-4] Length = 223 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 16/174 (9%) Query: 25 MTRQYGRHLGFVRNG---QSHRMQPILQAGNL------VRVNWRSRLAQNLGEFRFEVLE 75 MT+ +G VR +S L N V NW+ +L F+ ++ Sbjct: 1 MTKDHGIFTIDVRGALRPKSRLGAATL---NFSYGKYIVNTNWKG--ISSLRTFK--DVK 53 Query: 76 SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIE 135 L + Y + L E + YD++ L + I ++ Sbjct: 54 QLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIMKALLKINSGEDVAVITQMVQ 113 Query: 136 LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSF 189 L LL G L +C++ G Q S + GG +C +++M + P Sbjct: 114 LKLLNAYGVAPQLDRCLICGKVQGTFDYSLELGGIICSDHFNSVSQRMHLDPKV 167 >gi|326797482|ref|YP_004315301.1| DNA repair protein recO [Sphingobacterium sp. 21] gi|326548246|gb|ADZ76631.1| DNA repair protein recO [Sphingobacterium sp. 21] Length = 240 Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 58/151 (38%), Gaps = 9/151 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L + Y E +++ ++ T ++G + + R + ILQ +L+ + Sbjct: 1 MLHKTRGIVLKITPYAETSVVAQIFTEKFGIQSYLINGVKRARAKIHLNILQPLHLLDLV 60 Query: 58 WRSRLAQNL---GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + L E R + + S + I +++ + ++ P +L++ L Sbjct: 61 VYQKTTTGLNRMAEARQLPVFQRIPYDIIKSSMALFITEI--IYKSIRQQGPDEKLFEYL 118 Query: 115 NIFLNCHKIPSVIGKIF-VQIELMLLKNIGF 144 + F + L L K +GF Sbjct: 119 FSAICWLDSSEETPINFHLAFLLKLTKYLGF 149 >gi|288929801|ref|ZP_06423644.1| DNA repair protein RecO [Prevotella sp. oral taxon 317 str. F0108] gi|288328902|gb|EFC67490.1| DNA repair protein RecO [Prevotella sp. oral taxon 317 str. F0108] Length = 243 Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 80/236 (33%), Gaps = 44/236 (18%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGR---HLGFVRNGQSHRMQPILQAGNLVRVN 57 M + AI+L YG+ +I +++T +GR R ++ + + Q ++ + Sbjct: 1 MLVKTHAIVLRSIKYGDSQLITDMLTETFGRVSFVSNIPRTQKAKIKKQLFQPLTILEIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--------REPCLE 109 + R + A++ + ++ + + FL E + + Sbjct: 61 L-----DHRPNTRLQ--RLRDARMAYPFTSIPYSEAKLAITLFLAEFLCHATRSEQQNVP 113 Query: 110 LYDMLNIFLNCHKIPSVIGKIFVQIELMLL----KNIGFGLDLTKCVVTGVTQDLLWVSP 165 LY + + ++F L + + +GF +L G DL Sbjct: 114 LYRYVET---SVRWLDGAQQLFANFHLAFMIRLSRFLGFYPNLEN-YSPGCLFDL----- 164 Query: 166 KSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 +SG V DA + + ++T ++++AL HN Sbjct: 165 RSGCFV-------------PAIPMHNDYLSPADAAQMATLMRITPQTMHRFALSHN 207 >gi|296113912|ref|YP_003627850.1| DNA replication and repair protein RecO [Moraxella catarrhalis RH4] gi|295921606|gb|ADG61957.1| DNA replication and repair protein RecO [Moraxella catarrhalis RH4] gi|326560589|gb|EGE10970.1| DNA repair protein RecO [Moraxella catarrhalis 103P14B1] gi|326561462|gb|EGE11812.1| DNA repair protein RecO [Moraxella catarrhalis 46P47B1] gi|326562234|gb|EGE12562.1| DNA repair protein RecO [Moraxella catarrhalis 7169] gi|326565584|gb|EGE15747.1| DNA repair protein RecO [Moraxella catarrhalis 12P80B1] gi|326567188|gb|EGE17310.1| DNA repair protein RecO [Moraxella catarrhalis BC1] gi|326568470|gb|EGE18550.1| DNA repair protein RecO [Moraxella catarrhalis BC7] gi|326572023|gb|EGE22025.1| DNA repair protein RecO [Moraxella catarrhalis BC8] gi|326573970|gb|EGE23920.1| DNA repair protein RecO [Moraxella catarrhalis O35E] gi|326574962|gb|EGE24892.1| DNA repair protein RecO [Moraxella catarrhalis 101P30B1] Length = 269 Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 24/164 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-QPI---------LQAGNLVRV 56 +L R Y EK I + + + G G G+ + PI L++ + + Sbjct: 8 GYLLHQRPYQEKRAIYQFFSYEKGVVHGI--GGRGMPLFTPIWLMSSGTKSLKSFGQISL 65 Query: 57 NWRSRLAQNLGEFRFEVLESHCAK-LLSSSLFLYGLQSIVPLFRFLPEREPCLELY---- 111 + + L E + L++ + L L + L PC +L+ Sbjct: 66 GFSDEFVRQLTAQSNEAAYHPASYGLMTGRVQYALLYMNEILDKLLATESPCPKLWQVYH 125 Query: 112 ------DMLNIFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDL 148 L+ K++++ E L +G +D Sbjct: 126 TNMTKLHALDRLSLMAVDKMQAMKLYLRSFERGLFSELGVMMDF 169 >gi|224536621|ref|ZP_03677160.1| hypothetical protein BACCELL_01496 [Bacteroides cellulosilyticus DSM 14838] gi|224521712|gb|EEF90817.1| hypothetical protein BACCELL_01496 [Bacteroides cellulosilyticus DSM 14838] Length = 244 Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + ++I ++ T GR V+ +S + + Q LV + Sbjct: 1 MLQKTLGIVLHTLKYNDTSLIADIYTETAGRASFIVKIPRSRKAAVKSVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRFEVLESH---CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + N ++ +S+ + L L+R + E L+ L Sbjct: 61 --ADFRSNASMYKITEAKSYYPFSSIPYDPYKSSIALFLAEFLYRAVREEAENRPLFAYL 118 Query: 115 NIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + L + +G +L Sbjct: 119 QHSIIWLDECRDSFANFHLVFLMRLSRFLGLYPNLE 154 >gi|329920155|ref|ZP_08276986.1| DNA repair protein RecO [Lactobacillus iners SPIN 1401G] gi|328936609|gb|EGG33053.1| DNA repair protein RecO [Lactobacillus iners SPIN 1401G] Length = 248 Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLV---RV 56 ++ + Y + +++ ++MT + G ++ G + + L GN + Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSR--LLPATINFSYGNYLINTNY 67 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP----CLELYD 112 S L + E + Y + + + +P +++ Sbjct: 68 CGLSVLRNYKVVHQLEHI------YFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFN 121 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + EL LL G + CV +Q + S + GG VC Sbjct: 122 ALVKINEGIDNEIICQMV----ELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVC 177 Query: 173 R 173 + Sbjct: 178 K 178 >gi|325912662|ref|ZP_08175045.1| DNA repair protein RecO [Lactobacillus iners UPII 60-B] gi|325478083|gb|EGC81212.1| DNA repair protein RecO [Lactobacillus iners UPII 60-B] Length = 248 Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLV---RV 56 ++ + Y + +++ ++MT + G ++ G + + L GN + Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSR--LLPATINFSYGNYLINTNY 67 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP----CLELYD 112 S L + E + Y + + + +P +++ Sbjct: 68 CGLSVLRNYKVVHQLEHI------YFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFN 121 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + EL LL G + CV +Q + S + GG VC Sbjct: 122 ALVKINEGIDNEIICQMV----ELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVC 177 Query: 173 R 173 + Sbjct: 178 K 178 >gi|312872996|ref|ZP_07733056.1| DNA repair protein RecO [Lactobacillus iners LEAF 2062A-h1] gi|325912081|ref|ZP_08174479.1| DNA repair protein RecO [Lactobacillus iners UPII 143-D] gi|311091518|gb|EFQ49902.1| DNA repair protein RecO [Lactobacillus iners LEAF 2062A-h1] gi|325476031|gb|EGC79199.1| DNA repair protein RecO [Lactobacillus iners UPII 143-D] Length = 248 Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLV---RV 56 ++ + Y + +++ ++MT + G ++ G + + L GN + Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSR--LLPATINFSYGNYLINTNY 67 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP----CLELYD 112 S L + E + Y + + + +P +++ Sbjct: 68 CGLSVLRNYKVVHQLEHI------YFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFN 121 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + EL LL G + CV +Q + S + GG VC Sbjct: 122 ALVKINEGIDNEIICQMV----ELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVC 177 Query: 173 R 173 + Sbjct: 178 K 178 >gi|312874194|ref|ZP_07734228.1| DNA repair protein RecO [Lactobacillus iners LEAF 2052A-d] gi|311090264|gb|EFQ48674.1| DNA repair protein RecO [Lactobacillus iners LEAF 2052A-d] Length = 248 Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLV---RV 56 ++ + Y + +++ ++MT + G ++ G + + L GN + Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSR--LLPATINFSYGNYLINTNY 67 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP----CLELYD 112 S L + E + Y + + + +P +++ Sbjct: 68 CGLSVLRNYKVVHQLEHI------YFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFN 121 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + EL LL G + CV +Q + S + GG VC Sbjct: 122 ALVKINEGIDNEIICQMV----ELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVC 177 Query: 173 R 173 + Sbjct: 178 K 178 >gi|206602233|gb|EDZ38715.1| Recombination protein O (RecO) [Leptospirillum sp. Group II '5-way CG'] Length = 246 Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 28/186 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L Y E + ++ +R+ G GF R + G + SR+ L Sbjct: 5 ALVLRSVRYLESDKVVTFFSREEGVLTGFARGAAGMSNRF----GASLEPLTLSRI---L 57 Query: 67 GEFRFE-------------VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 G F E S + L G++ ++ L ++D+ Sbjct: 58 GRFHLEGTLYRIHKASIVNPFSSIKSDLDRCYWAGMGIRLLLGLLPAALPE---PPVFDI 114 Query: 114 LNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGG 169 +L + +++ L +G+ + C L + P G Sbjct: 115 AVNYLELLSAQEISPAFSWLRFAASALDLLGYQIRADDCSFCKEAPFGNSLFYY-PMDGR 173 Query: 170 AVCRSV 175 +C Sbjct: 174 VLCSRC 179 >gi|308048451|ref|YP_003912017.1| DNA repair protein RecO [Ferrimonas balearica DSM 9799] gi|307630641|gb|ADN74943.1| DNA repair protein RecO [Ferrimonas balearica DSM 9799] Length = 241 Score = 40.9 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 13/143 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A +L R Y E +++L++++ +GR R + LQ + ++ R Sbjct: 10 AYLLHARPYRESSLLLDLLSETHGRVAAVARVGGKTGGARKAQLQPFRPLMISLSGRS-- 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLF----LYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L A L L GL R L E +P L+D + L Sbjct: 68 -----TLRTLAQLEAPTLPMPLNGQRLFAGLYLNELCQRLLREWQPLDGLFDHYHEALLG 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIG 143 + + + E LL +G Sbjct: 123 LAGETPMEPHLREFERALLDLLG 145 >gi|253582379|ref|ZP_04859602.1| DNA repair protein recO [Fusobacterium varium ATCC 27725] gi|251835918|gb|EES64456.1| DNA repair protein recO [Fusobacterium varium ATCC 27725] Length = 134 Score = 40.9 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 M + D I++ + +GE + + + T +G+ V+ + + + Sbjct: 1 MKFFDSNGIVINKKDFGEADRYITIFTETFGKVNVIVKGIRKSKRR 46 >gi|311113587|ref|YP_003984809.1| recombination protein O [Rothia dentocariosa ATCC 17931] gi|310945081|gb|ADP41375.1| recombination protein O [Rothia dentocariosa ATCC 17931] Length = 255 Score = 40.9 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 51/145 (35%), Gaps = 11/145 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-RS 60 +D A+IL ++ GE + I+ ++T+ G ++ + + L+ ++ R Sbjct: 8 RDHALILRTQNLGEADRIIIMLTQNNGVIHAVAKSIRKPNSKFGARLEPYMHTDISLTRG 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL------PEREPCLELYDML 114 + + + ++ L+ + +I + L + P L Sbjct: 68 KTNLHTISQTA-TIHAYTVTLMGNYNAYTAANTIAEIAETLNTNSTPHDTNPHYHLTHGA 126 Query: 115 NIFLNCHKI-PSVIGKIFVQIELML 138 L +K P I ++ + L Sbjct: 127 IATLAHNKHTPQRILTSYILRAMKL 151 >gi|309803173|ref|ZP_07697270.1| DNA repair protein RecO [Lactobacillus iners LactinV 11V1-d] gi|308164681|gb|EFO66931.1| DNA repair protein RecO [Lactobacillus iners LactinV 11V1-d] Length = 248 Score = 40.5 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLV---RV 56 ++ + Y + +++ ++MT + G ++ G + + L GN + Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSR--LLPATINFSYGNYLINTNY 67 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP----CLELYD 112 S L + E + Y + + + +P +++ Sbjct: 68 CGLSVLRNYKVVHQLEHI------YFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFN 121 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + EL LL G + CV +Q + S + GG VC Sbjct: 122 ALMKINEGIDNEIICQMV----ELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVC 177 Query: 173 R 173 + Sbjct: 178 K 178 >gi|259500587|ref|ZP_05743489.1| DNA repair protein RecO [Lactobacillus iners DSM 13335] gi|302191278|ref|ZP_07267532.1| DNA repair protein recO [Lactobacillus iners AB-1] gi|309806596|ref|ZP_07700593.1| DNA repair protein RecO [Lactobacillus iners LactinV 03V1-b] gi|312871774|ref|ZP_07731862.1| DNA repair protein RecO [Lactobacillus iners LEAF 3008A-a] gi|312875542|ref|ZP_07735543.1| DNA repair protein RecO [Lactobacillus iners LEAF 2053A-b] gi|259167971|gb|EEW52466.1| DNA repair protein RecO [Lactobacillus iners DSM 13335] gi|308167016|gb|EFO69198.1| DNA repair protein RecO [Lactobacillus iners LactinV 03V1-b] gi|311088796|gb|EFQ47239.1| DNA repair protein RecO [Lactobacillus iners LEAF 2053A-b] gi|311092716|gb|EFQ51072.1| DNA repair protein RecO [Lactobacillus iners LEAF 3008A-a] Length = 248 Score = 40.5 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLV---RV 56 ++ + Y + +++ ++MT + G ++ G + + L GN + Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSR--LLPATINFSYGNYLINTNY 67 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP----CLELYD 112 S L + E + Y + + + +P +++ Sbjct: 68 CGLSVLRNYKVVHQLEHI------YFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFN 121 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + EL LL G + CV +Q + S + GG VC Sbjct: 122 ALMKINEGIDNEIICQMV----ELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVC 177 Query: 173 R 173 + Sbjct: 178 K 178 >gi|110639673|ref|YP_679883.1| DNA replication and repair protein RecO [Cytophaga hutchinsonii ATCC 33406] gi|110282354|gb|ABG60540.1| DNA replication and repair protein RecO [Cytophaga hutchinsonii ATCC 33406] Length = 224 Score = 40.5 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 8/128 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAGNLVR-V 56 M + I+L Y + +II +V T +G VR+ ++ + Q L+ V Sbjct: 1 MLHKTKGIVLNYIKYSDTSIIAKVYTEAFGLQSYIINSVRSAKAKNKIALFQPLTLLDMV 60 Query: 57 NWRSRLA--QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + Q + E R E + + + L + L E EL+D L Sbjct: 61 VYHKNNHGLQRISEMRC--AEPYFSIPFDIHKTSISIFLSELLLKTLKEESDNQELFDFL 118 Query: 115 NIFLNCHK 122 L+ Sbjct: 119 FHSLHALD 126 >gi|119513475|ref|ZP_01632500.1| DNA repair protein RecO [Nodularia spumigena CCY9414] gi|119461876|gb|EAW42888.1| DNA repair protein RecO [Nodularia spumigena CCY9414] Length = 295 Score = 40.5 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 5/119 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW---R 59 ++ I L + GE + I+ ++TR++G + ++G V + Sbjct: 5 YKATGINLKAQVLGESDRIVTILTREFGLIQAVAPGARKQNSSLGGRSGMFVVNELLIAK 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + + + AK L L + + L + L E +P ELY +LN +L Sbjct: 65 GRSLDRITQAQTVKTYPDLAKDLGK-LAAGQYLAEIVLCQALSE-QPQEELYQLLNEYL 121 >gi|1001446|dbj|BAA10070.1| slr0181 [Synechocystis sp. PCC 6803] Length = 260 Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 18/174 (10%) Query: 13 RSYGEKNIILEVMTRQYGRHLGFVRNGQ----SHRMQPILQAGNLVRVNWRSRLAQNLGE 68 ++GE + ++ + + +YG + S R + L N + + + + + Sbjct: 4 MAFGESDRLVTIFSPEYGLIRAIAPGARKPKSSLRGRTELFVVNQ-FLLFAGKSLDRINQ 62 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG 128 E S+ + G I + E LY++ L + + + Sbjct: 63 A--ETQYSYPGLGQNVCNLAAGQYLIELILALGTEASAQTSLYELFTEHLRRLETEATVE 120 Query: 129 KIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLW--------VSPKSGGAV 171 I+ + L + G C +T T + SP+ GG V Sbjct: 121 NIYGHLAQALFHCLGAEGIAPQFHHCAITAQTISPNFYDRQWRVGFSPELGGIV 174 >gi|270631537|ref|ZP_06222006.1| DNA repair protein RecO [Haemophilus influenzae HK1212] gi|270317531|gb|EFA29000.1| DNA repair protein RecO [Haemophilus influenzae HK1212] Length = 141 Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%) Query: 97 LFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L R + P L+ L + + E LL+ +G+G+D C +G Sbjct: 2 LTRVIESETPNPALFQHYLKCLTGLATETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGE 61 >gi|269215642|ref|ZP_06159496.1| DNA repair protein RecO [Slackia exigua ATCC 700122] gi|269131129|gb|EEZ62204.1| DNA repair protein RecO [Slackia exigua ATCC 700122] Length = 259 Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 60/189 (31%), Gaps = 18/189 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNW- 58 + A+++ GE + I+ ++ GR + V G P L+ ++V V Sbjct: 6 YSARALVVRKVKLGETDRIVHLI-ADDGRLVKAVAKGARKPTSPFSSRLEVFSVVDVLLA 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + R + E R ++++H L I + + P Y L Sbjct: 65 QGRSLDIVKEAR--LVDAHAGVRLDLLRAAAAAPLIECIAKAAQPDLPNPRSYACAVAAL 122 Query: 119 NCHKIPS--VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD---------LLWVSPKS 167 + I L + GF CV G D LL S Sbjct: 123 DAMDDAEAGDALAIGAAALLKVYSFTGFRPSFDACVSCGRRLDVDAARQERSLLAFSAFD 182 Query: 168 GGAVCRSVG 176 GG +C S G Sbjct: 183 GGVLCDSCG 191 >gi|265764975|ref|ZP_06093250.1| DNA repair protein RecO [Bacteroides sp. 2_1_16] gi|263254359|gb|EEZ25793.1| DNA repair protein RecO [Bacteroides sp. 2_1_16] Length = 242 Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L V Y + + I+E+ T GR V +S + + Q L+ Sbjct: 1 MLQKTVGIVLHVLKYNDTSNIVEMYTELSGRASFLVTVPRSKKVTVKSVLFQPLALIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKL---LSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R +L FR + +S L L+R + E L+ L Sbjct: 61 ADYRPNTSL--FRIKEAKSFSPFTSIPYDPFKSAIALFLAEFLYRAIREEAENRPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + + F + + L + +G +L Sbjct: 119 QHSILWLDTCKISFANFHLVFLMRLSRFLGLYPNLD 154 >gi|291287432|ref|YP_003504248.1| DNA repair protein RecO [Denitrovibrio acetiphilus DSM 12809] gi|290884592|gb|ADD68292.1| DNA repair protein RecO [Denitrovibrio acetiphilus DSM 12809] Length = 233 Score = 40.1 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 13/159 (8%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-LQAGNLVRVNWRSRL 62 + +AII + Y + + I T +GR FV+ + + + G ++ + Sbjct: 5 KTEAIIYKLVRYADSSAIAFAFTEDFGRLKLFVQKAFTKKGGIMCFMPG-MLDF---GKK 60 Query: 63 AQNLG-EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNC 120 +L + FE ++ L++ + + I + L E E P +L+D+L + + Sbjct: 61 DTDLSKYYSFENNTAY-YHYLNNHEIVMRMHLIFEIIEGLYEPELPDKKLFDLLLKYDDE 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + I+ +LK G L C G D Sbjct: 120 NFRKITPYIIYF-----ILKRSGVMFQLDSCYNCGSKDD 153 >gi|330997805|ref|ZP_08321640.1| DNA repair protein RecO [Paraprevotella xylaniphila YIT 11841] gi|329569693|gb|EGG51458.1| DNA repair protein RecO [Paraprevotella xylaniphila YIT 11841] Length = 285 Score = 40.1 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 13/159 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + ++L Y + ++I+++ T G V+ +S + + +++ ++ Sbjct: 45 MQEKTQGVVLRTLKYNDNSLIVDIYTAIRGTVSFMVKLPKSRKAALKGVFFRPLSILEID 104 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLL--SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + R L R +V + + L L L R L E L+ + Sbjct: 105 FDYRQKSALQRIR-DVRFKYVYQTLPYDPRKSSMALFLAEFLCRVLKHEEGSDTLFSYIL 163 Query: 116 IFLNCHKIPSVIGKIFVQIELMLL----KNIGFGLDLTK 150 L G+ F L+ L + +GF ++ + Sbjct: 164 YSLQWLDAS---GEGFSNFHLVFLTRLTRFLGFYPNVEE 199 >gi|308233977|ref|ZP_07664714.1| DNA repair protein RecO [Atopobium vaginae DSM 15829] gi|328944014|ref|ZP_08241479.1| hypothetical protein HMPREF0091_10704 [Atopobium vaginae DSM 15829] gi|327491983|gb|EGF23757.1| hypothetical protein HMPREF0091_10704 [Atopobium vaginae DSM 15829] Length = 258 Score = 40.1 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 9/104 (8%) Query: 82 LSSSLFLYGLQSIVPLFR--FLPEREPCLELYDM---LNIFLNCHKIPSVIGKIFVQIEL 136 L + + + L R P+ P ++++ +V+ + V Sbjct: 97 LPDAFAAACV--VCELARYTTFPD-LPNPFMFNICSCALSLCETINSYTVLLALVVAYTF 153 Query: 137 MLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +L + G+ L+ C+ G D+ + S SGG++C S Sbjct: 154 KVLAHEGYRPILSSCIYCGEA-DIAYFSATSGGSICTSCAHDID 196 >gi|53711591|ref|YP_097583.1| DNA repair protein [Bacteroides fragilis YCH46] gi|60679841|ref|YP_209985.1| DNA repair protein RecO [Bacteroides fragilis NCTC 9343] gi|253564358|ref|ZP_04841815.1| DNA repair protein RecO [Bacteroides sp. 3_2_5] gi|81317086|sp|Q5LIK3|RECO_BACFN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|81608766|sp|Q64ZM7|RECO_BACFR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52214456|dbj|BAD47049.1| DNA repair protein [Bacteroides fragilis YCH46] gi|60491275|emb|CAH06023.1| possible DNA repair protein RecO [Bacteroides fragilis NCTC 9343] gi|251948134|gb|EES88416.1| DNA repair protein RecO [Bacteroides sp. 3_2_5] gi|301161361|emb|CBW20901.1| possible DNA repair protein RecO [Bacteroides fragilis 638R] Length = 242 Score = 40.1 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L V Y + + I+E+ T GR V +S + + Q L+ Sbjct: 1 MLQKTVGIVLHVLKYNDTSNIVEMYTELSGRASFLVTVPRSKKATVKSVLFQPLALIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKL---LSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R +L FR + +S L L+R + E L+ L Sbjct: 61 ADYRPNTSL--FRIKEAKSFSPFTSIPYDPFKSAIALFLAEFLYRAIREEAENRPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + + F + + L + +G +L Sbjct: 119 QHSILWLDTCKISFANFHLVFLMRLSRFLGLYPNLD 154 >gi|46580308|ref|YP_011116.1| DNA repair protein RecO [Desulfovibrio vulgaris str. Hildenborough] gi|120602310|ref|YP_966710.1| DNA repair protein RecO [Desulfovibrio vulgaris DP4] gi|81566609|sp|Q72AU1|RECO_DESVH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790555|sp|A1VCW7|RECO_DESVV RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|46449725|gb|AAS96375.1| DNA repair protein RecO, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562539|gb|ABM28283.1| DNA replication and repair protein RecO [Desulfovibrio vulgaris DP4] gi|311233709|gb|ADP86563.1| DNA repair protein RecO [Desulfovibrio vulgaris RCH1] Length = 251 Score = 39.7 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 12/164 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + D A++L V + E ++ + + RQ G F G R + L N+V + Sbjct: 1 MDFTDQALVLRVGRFREADLWVRFLCRQRGIISAFAFGGCRSRRRFCGCLDIFNVVLMRV 60 Query: 59 ---RSRLAQNLGEFRF--EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 R L Q+L E + + L+ I L P+ + + Sbjct: 61 QGTRGGLYQSLQEATLLKGPDRLRR-DWRRYGVAVNCLRFIEALGAG-PDGAD--SAFTL 116 Query: 114 LNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGV 156 L + V+ + + G+ C G Sbjct: 117 TLEMLELLETVDVVPPLLPLLFRARFAFEQGYAPRFESCASCGE 160 >gi|328947959|ref|YP_004365296.1| DNA repair protein recO [Treponema succinifaciens DSM 2489] gi|328448283|gb|AEB13999.1| DNA repair protein recO [Treponema succinifaciens DSM 2489] Length = 250 Score = 39.7 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 14/158 (8%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRSRLAQ 64 +IL ++ GE N +++V++ + G + G R++ ++Q G L + SR + Sbjct: 4 VILSLKESGENNRLVKVISAENGIFNAMLYGGPKSRLKSLVQPFYSGILYIYSDESRNSI 63 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF---RFLPEREPCLELYDMLNIFLNCH 121 + +F + +S L + L + E E + + +L FL+ Sbjct: 64 KITDFDAQNCHL---SFRTSLLKSWAASFACELVLKTKCAGETE---KAFVLLCAFLDGI 117 Query: 122 KIPSVIGKIF--VQIELMLLKNIGFGLDLTKCVVTGVT 157 ++ L +G + C G + Sbjct: 118 DSVDENEARLGILRFVWRYLGLLGLQPEPRTCCGCGSS 155 >gi|210633810|ref|ZP_03297857.1| hypothetical protein COLSTE_01774 [Collinsella stercoris DSM 13279] gi|210159070|gb|EEA90041.1| hypothetical protein COLSTE_01774 [Collinsella stercoris DSM 13279] Length = 255 Score = 39.7 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 64/190 (33%), Gaps = 23/190 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGR-HLGFVRNGQ--SHRMQPILQAGNLVRVNW- 58 ++ AI+L E ++IL ++ + GR + + R+ + V V + Sbjct: 7 FRTKAIVLDKTKLKETDLILTLV-GESGRQIRAVAKGARKPGSRLAARCELCCEVDVLFA 65 Query: 59 RSR---LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 R + + +LL+++ + + E +Y + Sbjct: 66 HGRNLDIVSQADLIASPLGAQPSYELLTAASAVAEVAETCTY-----EDAEDPFVYAITR 120 Query: 116 IFLNCHKI---------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 L P+ + + LL ++G+ D + CV G + S + Sbjct: 121 AVLAHLAAAGADTPVEGPAHLDLLVAAYIFKLLSHVGYRPDYSACVACG-DPSPGYFSAQ 179 Query: 167 SGGAVCRSVG 176 +GG +C S Sbjct: 180 AGGLLCASCA 189 >gi|255530373|ref|YP_003090745.1| DNA repair protein RecO [Pedobacter heparinus DSM 2366] gi|255343357|gb|ACU02683.1| DNA repair protein RecO [Pedobacter heparinus DSM 2366] Length = 241 Score = 39.7 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVR 55 M + I+L Y E ++I+++ T ++G + + R + +LQ +LV Sbjct: 1 MLHKTRGIVLKTTLYSESSVIVQIFTEKFGIQSYIINGVKKPRAKISMNMLQPLHLVD 58 >gi|332830216|gb|EGK02844.1| DNA repair protein RecO [Dysgonomonas gadei ATCC BAA-286] Length = 240 Score = 39.7 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 15/160 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVN 57 M ++ ++L +Y +K ++ +V T +GR V R S + + ++ + Sbjct: 1 MLYKTRGLVLNTINYNDKYVLAQVFTESFGRVTYMVSKARGKSSKVPKSLFSPLAILDME 60 Query: 58 WRSRLAQNLGEFRFEVLE-SHCAKLL-----SSSLFLYGLQSIVPLFRFLPEREPCLELY 111 ++ + + + L S L R L + L+ Sbjct: 61 -----VEHQASRDIQRIREARADMYLYDISGDLSKTSMAFFLSEFLTRVLKDTNDSRILF 115 Query: 112 DMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTK 150 L + ++ F + L L +GF +L + Sbjct: 116 SFLEQSVQILEMTDKSISNFHLVFMLKLSHFLGFYPNLEE 155 >gi|313665393|ref|YP_004047264.1| DNA repair protein RecO [Mycoplasma leachii PG50] gi|312949214|gb|ADR23810.1| DNA repair protein RecO [Mycoplasma leachii PG50] Length = 249 Score = 39.7 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 60/163 (36%), Gaps = 8/163 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + N + + Sbjct: 1 MEKTLKGIVLNSFDFRDYDKIITIYSNLYGKISLICLGVNKIKSKNKYAI-NYLSYSNFE 59 Query: 58 -WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 ++++ L + R E++ S +L++Y + L L + L+ +L Sbjct: 60 IFKAKNKLGLSKLKRSELINSFNHIATDFNLYVYA-NVLTSLVMNLEDHIKNYNLFKILK 118 Query: 116 IFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + P++ K+ + LK IG ++LT C Sbjct: 119 LSIFLINNKPNISFKVCILFMFYFLKVIGNQINLTVCGFCNSK 161 >gi|309810250|ref|ZP_07704095.1| DNA repair protein RecO [Lactobacillus iners SPIN 2503V10-D] gi|308169522|gb|EFO71570.1| DNA repair protein RecO [Lactobacillus iners SPIN 2503V10-D] Length = 248 Score = 39.7 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 26/181 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-------GNLV---RV 56 ++ + Y + +++ ++MT + G ++ G + + L GN + Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSR--LLPATINFSYGNYLINTNY 67 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP----CLELYD 112 S L + E + Y + + + +P +++ Sbjct: 68 CGLSVLRNYKVVHQLEHI------YFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFN 121 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + + EL LL G + CV +Q + S GG VC Sbjct: 122 ALMKINEGIDNEIICQMV----ELKLLSAFGTMPEFRHCVFCDASQGIFDFSLPLGGIVC 177 Query: 173 R 173 + Sbjct: 178 K 178 >gi|315224182|ref|ZP_07866022.1| recombination protein O [Capnocytophaga ochracea F0287] gi|314945915|gb|EFS97924.1| recombination protein O [Capnocytophaga ochracea F0287] Length = 238 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRV 56 MY + AI++ + ++I++ T+ G ++ + + + Q L+ + Sbjct: 1 MYDKVRAIVISSLKCSDNSLIVKCFTQTMGTRSYLLQGVLAQKKGNLKTALFQPFMLLEL 60 Query: 57 NWRSRLAQNLG---EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + LG E + V + S L + P E++ Sbjct: 61 VATHKNNGTLGRVKEAKIAVPYYSLHTDMYKSAVSMFLSEVCAFVCT--SEAPDEEMFLF 118 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 L L ++ L + + +GF D T Sbjct: 119 LEQKLLFFDRNDFSANFHLKFLLDITRYLGFYPDTT 154 >gi|228470848|ref|ZP_04055695.1| hypothetical protein PORUE0001_1087 [Porphyromonas uenonis 60-3] gi|228307415|gb|EEK16425.1| hypothetical protein PORUE0001_1087 [Porphyromonas uenonis 60-3] Length = 243 Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 13/146 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQA--GNLVR-- 55 M + ++L V Y ++++I + T +G V G+S + Q G + Sbjct: 1 MITTVEGVVLRVIPYSDRSLIATLYTDLWGAAAFSVPIGGRSRATSNLFQPLRGLQLTTP 60 Query: 56 --VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + +L + +++ + Y L L L + L LY++ Sbjct: 61 SPASQPVKLIRQ-----VQLVRGALPLAQRPAASGYFLYLAQLLRELLAQEPEDLRLYNI 115 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLL 139 + L+ + ++ +L LL Sbjct: 116 IVQALDQLDRIESLEEL-QGFDLALL 140 >gi|297621803|ref|YP_003709940.1| putative DNA repair protein recO [Waddlia chondrophila WSU 86-1044] gi|297377104|gb|ADI38934.1| putative DNA repair protein recO [Waddlia chondrophila WSU 86-1044] Length = 228 Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 15/152 (9%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN 57 M + + IIL + ++++ T+++G + + GQS + + L Sbjct: 1 METIRAEGIILQSLPVKDWDLLITAFTKEFGVMKFYYKKGQSKKRSKGALTSP--LTCAE 58 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLL--SSSLFLYGLQSIVPLFRFLPERE----PCLELY 111 + R G F L L L L+ + + + P LY Sbjct: 59 FICR----KGNFDLIPLNEISVIDLHIDLRKTLEFLEYSCSWLKLIQRSQLPGKPAPNLY 114 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIG 143 +L FL+ + L LL++ G Sbjct: 115 LLLKAFLHSLPQFPKPETLHACFLLKLLRHEG 146 >gi|21903732|gb|AAM78623.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 218 Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 8/105 (7%) Query: 103 EREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW 162 E + L+ L L+ + + E+ +L G L+ +C + T L Sbjct: 73 ESDSH--LFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDLPLD 130 Query: 163 VSPKSGGAVCRSVGLPYAE----KMLVLPSFLWKEEQTIDADSLK 203 S + +C Y + + +L Q I D L+ Sbjct: 131 FSHRFSAVLCSE--HYYKDNRRNHLDPNVIYLLSRFQKITFDDLR 173 >gi|239627752|ref|ZP_04670783.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517898|gb|EEQ57764.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 216 Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 28/146 (19%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L G+ + L ++TR+ GR F + GN + + R + Sbjct: 9 GMVLISAPSGDYDRRLVLLTRERGRITAFAHGARK--------PGNPLMASSR---PFSF 57 Query: 67 GEFRFEVLESHCAKLLS--------SSLFL------YGLQSIVPLFRFLPEREPCLELYD 112 G F + E A L L L YG + F E EL Sbjct: 58 GTFT--LYEGRSAYNLQSSQIANYFDGLSLDMECTCYGSYFLEVADYFSQENMDGTELLK 115 Query: 113 MLNIFLNCHKIPSVIGKIFVQ-IELM 137 +L L PS+ ++ + EL Sbjct: 116 LLYQSLRALLNPSIPNRLARRVFELK 141 >gi|167957341|ref|ZP_02544415.1| DNA repair protein RecO [candidate division TM7 single-cell isolate TM7c] Length = 225 Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 4/130 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 AI+L +Y E + +L+++T + GR + + ++ ++ + + RS Sbjct: 9 AIVLRRTNYAEADRVLQLLTPK-GRRSVIAKGVRRERSKLAGGIELFAICDMVIRSGRGD 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG L + +L + + + L E E Y +L+ L P Sbjct: 68 -LGLLTSARLAAFYRHILEDYERMQFAYAAMKLVSTASENIDEPEWYFVLSQVLEQLNNP 126 Query: 125 SVIGKIFVQI 134 V K+ Sbjct: 127 VVNQKLIETW 136 >gi|313897343|ref|ZP_07830886.1| DNA repair protein RecO [Clostridium sp. HGF2] gi|312957713|gb|EFR39338.1| DNA repair protein RecO [Clostridium sp. HGF2] Length = 246 Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 19/184 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + I++ V+ Y E + +L+V+ R + + P +Q L Sbjct: 1 MQEEVCGILVDVKEYREHDALLKVLCEDGSLLSLSARGVRKVTSKNAPAVQLFTL----- 55 Query: 59 RSRLAQN-------LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 +RL N R E++ S+ ++R E +Y Sbjct: 56 -ARLQLNYQQTASIQSLRRAEIINSYRKIREDLVKQSIASYFCECIYRSGFEE----NVY 110 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 +L L+ + +I + ++ + G + CV TQ + VS + GG + Sbjct: 111 ILLKQSLDILQDAKHPLQILCLFQAVMNRMHGIEPFVDGCVRCQSTQHIQAVSRRDGGFI 170 Query: 172 CRSV 175 C+S Sbjct: 171 CKSC 174 >gi|332881733|ref|ZP_08449381.1| DNA repair protein RecO [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680372|gb|EGJ53321.1| DNA repair protein RecO [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 241 Score = 39.4 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR 43 M + ++L Y + ++I+++ T G V+ +S + Sbjct: 1 MQEKTQGVVLRTLKYNDNSLIVDIYTATRGTVSFMVKLPKSRK 43 >gi|310779162|ref|YP_003967495.1| DNA repair protein RecO [Ilyobacter polytropus DSM 2926] gi|309748485|gb|ADO83147.1| DNA repair protein RecO [Ilyobacter polytropus DSM 2926] Length = 241 Score = 39.4 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 13/159 (8%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + D +I+ YGE + ++ + +R+YG+ ++ + + + N V + Sbjct: 1 MKFLSSDGVIIKKLDYGEADRLITIFSRRYGKIQLNIKGIRKSKRRDK----NAVELLAF 56 Query: 60 S-----RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 S R + L FE+L+S + + + L L E + LYD Sbjct: 57 SKFVFYRKGERLITTNFELLDSFWGIRSNIKNIEIIMYILSVLNNILVENQRKSVLYDYF 116 Query: 115 NIFLNCHKIPS---VIGKIFVQIELMLLKNIGFGLDLTK 150 +N + +++ G +L++ Sbjct: 117 LKVINYLDKSENQIKNHLLVCHFLSKMIQEEGIAFELSE 155 >gi|221194425|ref|ZP_03567482.1| DNA repair protein RecO [Atopobium rimae ATCC 49626] gi|221185329|gb|EEE17719.1| DNA repair protein RecO [Atopobium rimae ATCC 49626] Length = 249 Score = 39.4 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 36/254 (14%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 A++L GE+++IL +T + + R+ + + V + +A+ Sbjct: 11 ALVLDRTKLGEQDLILTCLTDTGEELRAVAKGARKPGGRLAARTELFSEVDML----VAE 66 Query: 65 NLGEFRFEVLESHCAK--LLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIFLNCH 121 F A + + ++ + R E L+ +L+ L Sbjct: 67 GRSLFVVSEASLLSAHEKIRGDLSRVSAASTLCEIARLTCIEGYTDTFLFPILSRALTAV 126 Query: 122 KIPSVIGK---IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + S I +L + G+ +L C+ G + + S ++GG +C S Sbjct: 127 ERASDEAHLDVIVAAYVFKVLAHGGWRPELHSCIACG-DEAPTFFSSRAGGVLCASCARE 185 Query: 179 -------------YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC 225 + ++ L +F EE IDA+ T +FL Sbjct: 186 VEGAEALSASQRTWLASLISL-TFDQIEEVAIDAE--------TAFFLLS-LAHMWAATH 235 Query: 226 HLLRENFLGKLLEL 239 R LL + Sbjct: 236 LDARLRAFEFLLSV 249 >gi|149277016|ref|ZP_01883158.1| possible DNA repair protein [Pedobacter sp. BAL39] gi|149231893|gb|EDM37270.1| possible DNA repair protein [Pedobacter sp. BAL39] Length = 241 Score = 39.4 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVR 55 M + I+L Y E ++I+++ T + G + + + + +LQ +LV Sbjct: 1 MLHKTRGIVLKTTLYSESSVIVQIFTEKLGIQSYMINGVKKPKAKIHMNMLQPLHLVD 58 >gi|189464546|ref|ZP_03013331.1| hypothetical protein BACINT_00888 [Bacteroides intestinalis DSM 17393] gi|189438336|gb|EDV07321.1| hypothetical protein BACINT_00888 [Bacteroides intestinalis DSM 17393] Length = 245 Score = 39.0 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPIL-QAGNLVRVN 57 M + I+L Y + ++I ++ T GR V+ +S + ++P+L Q LV + Sbjct: 1 MLQKTLGIVLHTLKYNDTSLIADIYTEVVGRASFIVKIPRSRKAAVKPVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + N ++ +S + L L+R + E L+ L Sbjct: 61 --ADFRPNASIYKITEAKSFYPFSSIPYDPYKSSIALFLAEFLYRAVREEAENRPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 + F + + L + +G +L Sbjct: 119 QHSIIWLDECRDNFANFHLVFLMRLSRFLGLYPNLE 154 >gi|298491381|ref|YP_003721558.1| DNA repair protein RecO ['Nostoc azollae' 0708] gi|298233299|gb|ADI64435.1| DNA repair protein RecO ['Nostoc azollae' 0708] Length = 302 Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 14/132 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNW 58 +Q I L ++ GE + I+ ++T+++G + H + + N + ++ Sbjct: 5 YQATGINLKTQALGESDKIVTILTKEFGLIRAIATGARKHNSSLGGRSGIFVVNQLLIS- 63 Query: 59 RSRLAQ-NLGEF----RFEVLESHCAKLLSSSLFLYGLQSIV--PLFRFLPEREPCLELY 111 + R +Q + E ++++ + L L Q + L + L E +P ELY Sbjct: 64 QGRSSQPATPTLDKITQAETIKTYPS-LTKDLGKLTASQYLAEIVLCQALSE-QPQTELY 121 Query: 112 DMLNIFLNCHKI 123 ++LN L + Sbjct: 122 ELLNEHLQRLEA 133 >gi|329964538|ref|ZP_08301592.1| DNA repair protein RecO [Bacteroides fluxus YIT 12057] gi|328524938|gb|EGF51990.1| DNA repair protein RecO [Bacteroides fluxus YIT 12057] Length = 242 Score = 39.0 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 3/60 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q LV + Sbjct: 1 MLQKTSGIVLHTLKYKDTSIIVDIYTEVAGRASFVVSVPRSRKAAVKSVLFQPLALVELE 60 >gi|270295443|ref|ZP_06201644.1| DNA repair protein RecO [Bacteroides sp. D20] gi|317478440|ref|ZP_07937601.1| DNA repair protein RecO [Bacteroides sp. 4_1_36] gi|270274690|gb|EFA20551.1| DNA repair protein RecO [Bacteroides sp. D20] gi|316905399|gb|EFV27192.1| DNA repair protein RecO [Bacteroides sp. 4_1_36] Length = 242 Score = 39.0 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPIL-QAGNLVRVN 57 M + I+L Y + ++I ++ T GR V +S + ++P+L Q LV + Sbjct: 1 MLQKTLGIVLHTLKYKDTSLIADIYTEVAGRASFMVSIPRSRKAAVKPVLFQPLALVELE 60 >gi|160891427|ref|ZP_02072430.1| hypothetical protein BACUNI_03877 [Bacteroides uniformis ATCC 8492] gi|156858834|gb|EDO52265.1| hypothetical protein BACUNI_03877 [Bacteroides uniformis ATCC 8492] Length = 242 Score = 39.0 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPIL-QAGNLVRVN 57 M + I+L Y + ++I ++ T GR V +S + ++P+L Q LV + Sbjct: 1 MLQKTLGIVLHTLKYKDTSLIADIYTEVAGRASFMVSIPRSRKAAVKPVLFQPLALVELE 60 >gi|269123605|ref|YP_003306182.1| Recombinational DNA repair protein (RecF pathway)-like protein [Streptobacillus moniliformis DSM 12112] gi|268314931|gb|ACZ01305.1| Recombinational DNA repair protein (RecF pathway)-like protein [Streptobacillus moniliformis DSM 12112] Length = 215 Score = 39.0 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 23/42 (54%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 D AIIL + ++++ + T+++G+ + N ++ + + Sbjct: 5 NDVAIILNKKEISGSSVLVTMFTKEHGKISAIIFNARNSKKK 46 >gi|254477805|ref|ZP_05091191.1| Flp pilus assembly protein CpaB [Ruegeria sp. R11] gi|214032048|gb|EEB72883.1| Flp pilus assembly protein CpaB [Ruegeria sp. R11] Length = 286 Score = 39.0 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 1 MYWQDDAII-LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M +D+AI+ + V GE + + + G +R S + L+ G+ V V W Sbjct: 105 ME-KDEAILAIKVTKPGEDAGLTSRL--ERGMRAFAIRVDVSSGVSGFLRPGDRVDVYWT 161 Query: 60 SRLAQN 65 R+ Sbjct: 162 GRVDDQ 167 >gi|260642619|ref|ZP_05859466.1| DNA repair protein RecO [Bacteroides finegoldii DSM 17565] gi|260621280|gb|EEX44151.1| DNA repair protein RecO [Bacteroides finegoldii DSM 17565] Length = 164 Score = 39.0 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDIYTELSGRASFLVAVPRSRKAAVKSVLFQPLSFIEFE 60 >gi|258544194|ref|ZP_05704428.1| DNA repair protein RecO [Cardiobacterium hominis ATCC 15826] gi|258520570|gb|EEV89429.1| DNA repair protein RecO [Cardiobacterium hominis ATCC 15826] Length = 222 Score = 39.0 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 47/152 (30%), Gaps = 31/152 (20%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ------PIL------QAG 51 Q+ A L + Y E N ++++ + +G R Q + P L Q Sbjct: 6 QEPAFALHRKPYKENNYLIDIFSLNFGLFRASARIQQKKTHRKTSNYAPFLLLQISGQRK 65 Query: 52 NLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 + W++ + +F A L+ L LP +P ++ Sbjct: 66 GELASLWQA---EVQYDFTPRPARLLHAHYLNE-----------ILLGLLPPDDPAPTVF 111 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIG 143 + L Q E LL ++G Sbjct: 112 HQYLLALQRVD-----ALALRQFEYTLLTHLG 138 >gi|222151465|ref|YP_002560621.1| hypothetical protein MCCL_1218 [Macrococcus caseolyticus JCSC5402] gi|254764642|sp|B9E6V7|RECO_MACCJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222120590|dbj|BAH17925.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 251 Score = 39.0 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 8/152 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVN 57 M + I++ +YG+ ++I+ + + RN + L NL + Sbjct: 1 MLKKAVGIVIRRVAYGDNHLIITFLNEAGVKVALMARNARKSTKYGSGLDLFYENLFIFS 60 Query: 58 WRSRLAQNLGEF-RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + +G + + SH + Y + + R L E E Y +L + Sbjct: 61 Q----FKGMGTLSSVDTINSHYEIREDIYVMTYAQYVVELIDRALEEDETNPYAYQLLKV 116 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDL 148 L + I + + + + G+ + Sbjct: 117 ALTHMERSDKARLIALLVSIKCMPLYGYVPNF 148 >gi|326381619|ref|ZP_08203313.1| DNA repair protein RecO [Gordonia neofelifaecis NRRL B-59395] gi|326199866|gb|EGD57046.1| DNA repair protein RecO [Gordonia neofelifaecis NRRL B-59395] Length = 273 Score = 38.6 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 79/248 (31%), Gaps = 25/248 (10%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN-WRSRLAQN 65 +L GE + I+ +T ++G + + R + L+ V V+ + R Sbjct: 1 MLRQHKLGEADRIITFLTAEHGLVRAVAKGVRRTRSKFGARLEPFAHVDVHFYPGRNLD- 59 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRF---LP--EREPCLELYDMLNIFLN 119 + + L + + YG + + L ER P L+ + L Sbjct: 60 -VITQVDSLHAFS----DDIVADYGRYTTACAVLETAERLAGEERAPAQHLHRLTVGALA 114 Query: 120 CH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV---CRSV 175 + I L + + G+ L+ C +GGAV CR Sbjct: 115 ALAEDRRDRQLILDAFLLRAMSSAGWMPALSVCARCAQPGPHRAFHVAAGGAVCIHCRPA 174 Query: 176 GLP-----YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 G + M L W+ + + A LT L + L+ + L+ Sbjct: 175 GAATPSVGVLDLMEALARGEWEHVTSASDSQRRQATGLTAAHLQWH-LERQLRTLPLIER 233 Query: 231 NFLGKLLE 238 +L+E Sbjct: 234 QAPHRLIE 241 >gi|282880623|ref|ZP_06289329.1| DNA repair protein RecO [Prevotella timonensis CRIS 5C-B1] gi|281305518|gb|EFA97572.1| DNA repair protein RecO [Prevotella timonensis CRIS 5C-B1] Length = 241 Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 5/154 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + +AI+L YG+ +I+++ T + G R ++ + Q + + Sbjct: 1 MLVKTEAIVLRALKYGDAQLIVDLFTERMGCVTFIHRVKKTKHGRIGVQFFQPLTHLEIE 60 Query: 58 WRSRLAQNLGEFR-FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + L + ++ + + + L L++ + + LY + Sbjct: 61 YDALHNGRLPRLKEVRMVNPYLSIPFDALKLSISLFIAEFLYQCVKGEQASGALYQYVTT 120 Query: 117 FLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLT 149 ++ + F + L L + IGF +L Sbjct: 121 SVHWLDAATAGFANFHLVFMLHLTRFIGFYPNLE 154 >gi|333029411|ref|ZP_08457472.1| DNA repair protein recO [Bacteroides coprosuis DSM 18011] gi|332740008|gb|EGJ70490.1| DNA repair protein recO [Bacteroides coprosuis DSM 18011] Length = 242 Score = 38.6 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + ++L V Y + I+++ T GR V +S + + + Q ++ +N Sbjct: 1 MEEKTLGVVLKVIKYNDTTNIVDLYTECLGRCSVAVNIPKSSKARVKSNLFQPLAILDLN 60 Query: 58 WRSRLAQNLGEFRFEVLESHCA 79 SR + G +R + + H A Sbjct: 61 L-SRSKKG-GLYRVKDAKPHLA 80 >gi|255012606|ref|ZP_05284732.1| hypothetical protein B2_01764 [Bacteroides sp. 2_1_7] Length = 241 Score = 38.6 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 14/134 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVN 57 M + I+L Y +K I+ + T +GR V R +S + + +++ + Sbjct: 1 MLCKTRGIVLHTIPYNDKYSIIYMYTEAFGRASYLVSRSRGKKSTVSKALFIPLSVLEME 60 Query: 58 WRSRLAQNLG---EFRFEVLESHCAK--LLSSSLF-LYGLQSIVPLFRFLPEREPCLELY 111 ++L R + + + + L LFR + + EP L+ Sbjct: 61 -----VEHLNKRDLHRIKETRICFPLNDVCCDPVKNVLALFLSEVLFRVVKDTEPDPRLF 115 Query: 112 DMLNIFLNCHKIPS 125 D L ++ + Sbjct: 116 DYLYESIHLLEYAD 129 >gi|303327128|ref|ZP_07357570.1| DNA repair protein RecO [Desulfovibrio sp. 3_1_syn3] gi|302863116|gb|EFL86048.1| DNA repair protein RecO [Desulfovibrio sp. 3_1_syn3] Length = 251 Score = 38.6 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 12/164 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M W D A++L + + E ++ L+++ R G F G R + L N ++ Sbjct: 1 MEWADQAVVLRIGHFRESDLWLKLLCRGRGLLTLFAFGGSRSRRRFCGCLDVLNTLQC-- 58 Query: 59 RSRLAQNLGEFRFEVLESHCAK------LLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 R + + E L L+ + L + L + Sbjct: 59 RVKTSGRENFLNLEEAVLLSGPQCLRGNWQRMGLAANCLRFVEALGVNEEGADETFALVE 118 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L L + P + + + L L +GF +L +C G Sbjct: 119 DLRRVLE--EEPRLPSLLPLFFRLRLAGALGFAPNLGQCGACGA 160 >gi|212550407|ref|YP_002308724.1| DNA repair protein RecO [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|254790508|sp|B6YQ41|RECO_AZOPC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|212548645|dbj|BAG83313.1| DNA repair protein RecO [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 241 Score = 38.2 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVN 57 M ++ AI L +Y + I+ V+T ++G + + + +LV + Sbjct: 1 MLYKTKAITLYNINYNDNYSIVHVLTEEFGPVSYLTAKFKKQKTHLSKSFFHPLSLVELE 60 Query: 58 WRSRLAQNLGEFRFEVLESH-----CAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELY 111 ++ + ++ LL++ + + + + L E++ L+ Sbjct: 61 -----VEHKNLREIQYIKEAKTYIPLVSLLNNPIKSSICIFLAEFISKALKEKQSDKLLF 115 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIEL----MLLKNIGF 144 N L ++ I K + L L + +GF Sbjct: 116 ---NYILQSIQVLEFIEKNYSNFHLVFTIRLSQFLGF 149 >gi|251772822|gb|EES53382.1| DNA polymerase III, subunits gamma and tau [Leptospirillum ferrodiazotrophum] Length = 576 Score = 38.2 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 7/142 (4%) Query: 73 VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFV 132 L S ++ + + + L + L E P + + HKIP + Sbjct: 116 PLTSRSRIVIIDEVHMLSTSAFNALLKTLEEPPPHVVF---ILATTEAHKIPDTVLSRCQ 172 Query: 133 QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWK 192 LL ++ ++ + + ++P G V R+ + + +L L Sbjct: 173 HFRFRLLTVS----QISDRILHVCRSENISLNPTVTGMVARAAEGSLRDALSLLDQLLRT 228 Query: 193 EEQTIDADSLKSAFQLTDYFLN 214 +++ + +TD+ L Sbjct: 229 GGESLTPADVADLLGVTDHALE 250 >gi|126642552|ref|YP_001085536.1| DNA repair protein [Acinetobacter baumannii ATCC 17978] Length = 214 Score = 38.2 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 17/134 (12%) Query: 23 EVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLL 82 + T++YGR G +R P Q ++ +S L + E+L Sbjct: 2 HLFTQEYGRVDGILR----QTPPPQYQP-IRLQATGKSELKN---FTKLEILNQPVFFFG 53 Query: 83 SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL------NCHKIPSVIGKIFVQ-IE 135 + + L IV R P E + ++ + L + H+ P + + ++ E Sbjct: 54 DAFFAGFYLNEIV--LRLCPLEEAMPQTFEQYQLTLLQLQQLSSHENPDLFLRQILRQFE 111 Query: 136 LMLLKNIGFGLDLT 149 +LL +G+ +D + Sbjct: 112 HILLAELGYAIDFS 125 >gi|241763852|ref|ZP_04761897.1| Recombination protein O RecO [Acidovorax delafieldii 2AN] gi|241366896|gb|EER61310.1| Recombination protein O RecO [Acidovorax delafieldii 2AN] Length = 310 Score = 38.2 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 3/112 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A +L + E ++ILEV R +GR + + S +P+L + V + Sbjct: 10 EPAFVLHSYDWSESSLILEVFCRHHGRVALVAKGAKKPSSNFRPVLLPLQPLLVTYTLGG 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDM 113 + + E ++ + L G+ L R L +P L+D Sbjct: 70 DGSAEVHTLKGAEWVGGHVMPTGDALLSGMYLNELLLRLLARDDPHPALFDA 121 >gi|302409340|ref|XP_003002504.1| ATP-dependent RNA helicase DBP3 [Verticillium albo-atrum VaMs.102] gi|261358537|gb|EEY20965.1| ATP-dependent RNA helicase DBP3 [Verticillium albo-atrum VaMs.102] Length = 571 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 3/79 (3%) Query: 30 GRHLGFVRNGQSH-RMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFL 88 G V G S + +LQ G + V RL + + ++ S A L + L Sbjct: 273 GLKSVCVYGGASKDEQRALLQRGADIIVATPGRLKDFMSDGTVDLSHSRFAVLDEADRML 332 Query: 89 --YGLQSIVPLFRFLPERE 105 I + +P RE Sbjct: 333 DKGFEDDIKAILGAMPARE 351 >gi|253568815|ref|ZP_04846225.1| DNA repair protein [Bacteroides sp. 1_1_6] gi|251840834|gb|EES68915.1| DNA repair protein [Bacteroides sp. 1_1_6] Length = 242 Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 21/162 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLV--- 54 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRTSFLVPVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 55 -RVNWRS---RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 + R+ + + S SS+ L+ L+R + E L Sbjct: 61 ADFRPNATLYRVKEAKSFY---PFTSIPYDPYKSSMALF---LAEFLYRAIREEAENRPL 114 Query: 111 YDMLNIF---LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + L L+ + + + L + +G +L Sbjct: 115 FAYLQHSVIWLDECREGFANFHLV--FLMRLSRFLGLYPNLE 154 >gi|148543970|ref|YP_001271340.1| DNA replication and repair protein RecO [Lactobacillus reuteri DSM 20016] gi|184153365|ref|YP_001841706.1| DNA repair protein RecO [Lactobacillus reuteri JCM 1112] gi|227364883|ref|ZP_03848929.1| recombination protein O [Lactobacillus reuteri MM2-3] gi|325682492|ref|ZP_08162009.1| recombination protein O [Lactobacillus reuteri MM4-1A] gi|166918731|sp|A5VJH9|RECO_LACRD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229485535|sp|B2G6Z4|RECO_LACRJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148531004|gb|ABQ83003.1| DNA replication and repair protein RecO [Lactobacillus reuteri DSM 20016] gi|183224709|dbj|BAG25226.1| DNA repair protein RecO [Lactobacillus reuteri JCM 1112] gi|227070087|gb|EEI08464.1| recombination protein O [Lactobacillus reuteri MM2-3] gi|324978331|gb|EGC15281.1| recombination protein O [Lactobacillus reuteri MM4-1A] Length = 261 Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 6/183 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 II+ + Y E++++++++T + G + FV+N + RM + + L + Sbjct: 10 GIIMYRQDYRERDLLVKMLTDKIGPAMFFVKNAKKRGFRMTADILPFT--HGTYIGSLDE 67 Query: 65 N-LGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 N L S K+ S S Y + + + + + L+ + Sbjct: 68 NGLSFINTASDTSQYKKIASDISKNAYVTYILALVDSAFNDGRSIGGWFKQVAAALDLIE 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I IE LL G +CVV G L S + GG +C++ + Sbjct: 128 KGLDEQIITNVIETQLLVAFGVAPVWDRCVVCGRNDLALDFSEQYGGMLCQNHWSLDEHR 187 Query: 183 MLV 185 + + Sbjct: 188 LYL 190 >gi|332296317|ref|YP_004438240.1| hypothetical protein Thena_1497 [Thermodesulfobium narugense DSM 14796] gi|332179420|gb|AEE15109.1| hypothetical protein Thena_1497 [Thermodesulfobium narugense DSM 14796] Length = 178 Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 24/54 (44%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN 57 + I L E + I++++T G +R + + ++ ++ G L+ V Sbjct: 2 TNQVIFLKSYPIKENSFIVKILTDSEGSLPALLRGSKKNILRKLIFPGTLMDVE 55 >gi|332883723|gb|EGK04003.1| DNA repair protein RecO [Dysgonomonas mossii DSM 22836] Length = 280 Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 56/159 (35%), Gaps = 17/159 (10%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVNWR 59 ++ ++L +Y +K ++ ++ T +GR V R S + + ++ + Sbjct: 43 YKTRGLVLNTINYNDKYLLAQLFTESFGRVTYMVSKARGKGSKVPKSLFSPLAILDME-- 100 Query: 60 SRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIV-----PLFRFLPEREPCLELYDM 113 ++ + + + L G S+ L R L + + L+D Sbjct: 101 ---VEHQSNRDIQRIREARSDFYLYEIAGDMGKTSMTFFLSEFLSRVLKDADTSQLLFDF 157 Query: 114 LNIFLNCHK--IPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L + + S+ V L L +GF +L + Sbjct: 158 LEQSVQILEMTDKSIANFHLV-FMLKLSHFMGFYPNLEE 195 >gi|160883900|ref|ZP_02064903.1| hypothetical protein BACOVA_01873 [Bacteroides ovatus ATCC 8483] gi|260172415|ref|ZP_05758827.1| DNA repair protein [Bacteroides sp. D2] gi|299147114|ref|ZP_07040181.1| DNA repair protein RecO [Bacteroides sp. 3_1_23] gi|315920711|ref|ZP_07916951.1| DNA repair protein [Bacteroides sp. D2] gi|156110630|gb|EDO12375.1| hypothetical protein BACOVA_01873 [Bacteroides ovatus ATCC 8483] gi|298514999|gb|EFI38881.1| DNA repair protein RecO [Bacteroides sp. 3_1_23] gi|313694586|gb|EFS31421.1| DNA repair protein [Bacteroides sp. D2] Length = 242 Score = 37.8 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 11/148 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R L +R + +S + L L+R + E L+ L Sbjct: 61 ADYRPNATL--YRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYL 118 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNI 142 + G+ F L+ L + Sbjct: 119 QHSIIWLDE---CGEGFANFHLVFLMRL 143 >gi|332300655|ref|YP_004442576.1| hypothetical protein Poras_1475 [Porphyromonas asaccharolytica DSM 20707] gi|332177718|gb|AEE13408.1| hypothetical protein Poras_1475 [Porphyromonas asaccharolytica DSM 20707] Length = 243 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 13/146 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQA--GNLVR-- 55 M + I+L V Y ++++I + T +G V G+S + Q G + Sbjct: 1 MITTVEGIVLRVIPYSDRSLIATLYTDLWGATAFSVPIGGRSRATSNLFQPLRGLQITTP 60 Query: 56 --VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + +L + +++ + Y L L L + L LY++ Sbjct: 61 SPASQPVKLIRQ-----VQLVRGALPLAQRPAASGYFLYLSQLLRELLAQEPEDLHLYNI 115 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLL 139 + L + ++ +L LL Sbjct: 116 VAQALEQLDGMETLEEL-QGFDLALL 140 >gi|313886765|ref|ZP_07820472.1| putative DNA repair protein RecO [Porphyromonas asaccharolytica PR426713P-I] gi|312923806|gb|EFR34608.1| putative DNA repair protein RecO [Porphyromonas asaccharolytica PR426713P-I] Length = 243 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 13/146 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQA--GNLVR-- 55 M + I+L V Y ++++I + T +G V G+S + Q G + Sbjct: 1 MITTVEGIVLRVIPYSDRSLIATLYTDLWGATAFSVPIGGRSRATSNLFQPLRGLQITTP 60 Query: 56 --VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + +L + +++ + Y L L L + L LY++ Sbjct: 61 SPASQPVKLIRQ-----VQLVRGALPLAQRPAASGYFLYLSQLLRELLAQEPEDLHLYNI 115 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLL 139 + L + K+ +L LL Sbjct: 116 VAQALEQLDGMETLEKL-QGFDLALL 140 >gi|295086260|emb|CBK67783.1| DNA replication and repair protein RecO [Bacteroides xylanisolvens XB1A] Length = 264 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 23 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIEFE 82 Query: 58 WRSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R L +R + +S + L L+R + E L+ L Sbjct: 83 ADYRPNATL--YRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYL 140 Query: 115 NIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + L + +G +L Sbjct: 141 QHSIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLE 176 >gi|237743925|ref|ZP_04574406.1| DNA repair protein recO [Fusobacterium sp. 7_1] gi|229432956|gb|EEO43168.1| DNA repair protein recO [Fusobacterium sp. 7_1] Length = 233 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 17/42 (40%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + I++ R E + + + YG+ ++ + + + Sbjct: 5 RGKGIVISKRDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|220912358|ref|YP_002487667.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Arthrobacter chlorophenolicus A6] gi|219859236|gb|ACL39578.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Arthrobacter chlorophenolicus A6] Length = 296 Score = 37.4 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 15/102 (14%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVN--WRS 60 + A+ GVR E H + G + ++ ++QAG V + + Sbjct: 127 EQAVATGVRFLKEGLA-----------HAVKIEGGAYYAPTVRAMVQAGVPVMAHIGFTP 175 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP 102 + LG +R + +L+ ++ L G + L +P Sbjct: 176 QSEHALGGYRVQGRGDDAQRLIDDAVALAGAGAFCVLMEMVP 217 >gi|159029991|emb|CAO90370.1| recO [Microcystis aeruginosa PCC 7806] Length = 259 Score = 37.4 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 64/162 (39%), Gaps = 14/162 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQP---ILQAGNLVRVN 57 +Q I L ++GE + +L ++T +YG + ++ ++ + NL+ V Sbjct: 5 YQATGINLQGMAFGEADRLLTILTAEYGLIRAIAPGARKYKSSLRGRSELFVVNNLLIVA 64 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDML-- 114 +S L + + E +ES+ KL + L Q + L + +P ELY+++ Sbjct: 65 GKS-LDK---VVQAETIESYP-KLSQNLAKLTVSQYLCELVLAIALSEQPQRELYELICS 119 Query: 115 -NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I Q L G + C++TG Sbjct: 120 HLARIEVLDENQYILPYLCQAIFHFLIIAGLVPQVHNCLLTG 161 >gi|298387921|ref|ZP_06997470.1| DNA repair protein RecO [Bacteroides sp. 1_1_14] gi|298259328|gb|EFI02203.1| DNA repair protein RecO [Bacteroides sp. 1_1_14] Length = 242 Score = 37.4 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 21/162 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRV- 56 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRTSFLVPVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 57 ---NWRS---RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 + R+ + + S SS+ L+ L+R + E L Sbjct: 61 ADYRPNATLYRVKEAKSFY---PFTSIPYDPYKSSMALF---LAEFLYRAIREEAENRPL 114 Query: 111 YDMLNIF---LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + L L+ + + + L + +G +L Sbjct: 115 FAYLQHSVIWLDECREGFANFHLV--FLMRLSRFLGLYPNLE 154 >gi|194365602|ref|YP_002028212.1| aldehyde dehydrogenase [Stenotrophomonas maltophilia R551-3] gi|194348406|gb|ACF51529.1| Aldehyde Dehydrogenase [Stenotrophomonas maltophilia R551-3] Length = 461 Score = 37.4 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 7/70 (10%) Query: 44 MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV---PLFRF 100 ++ IL G W +R + R EVL + A L L L + Sbjct: 30 LEAILDRGQAGFAAWSARSLEQ----RAEVLRAMAAVLRRDREKLAALATAEMGKVQAES 85 Query: 101 LPEREPCLEL 110 L E E C L Sbjct: 86 LAEIEKCAVL 95 >gi|237720394|ref|ZP_04550875.1| DNA repair protein [Bacteroides sp. 2_2_4] gi|293370458|ref|ZP_06617011.1| DNA repair protein RecO [Bacteroides ovatus SD CMC 3f] gi|298480565|ref|ZP_06998762.1| DNA repair protein RecO [Bacteroides sp. D22] gi|229450145|gb|EEO55936.1| DNA repair protein [Bacteroides sp. 2_2_4] gi|292634450|gb|EFF52986.1| DNA repair protein RecO [Bacteroides ovatus SD CMC 3f] gi|298273386|gb|EFI14950.1| DNA repair protein RecO [Bacteroides sp. D22] Length = 242 Score = 37.4 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R L +R + +S + L L+R + E L+ L Sbjct: 61 ADYRPNATL--YRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYL 118 Query: 115 NIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + L + +G +L Sbjct: 119 QHSIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLE 154 >gi|29348840|ref|NP_812343.1| DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] gi|81586736|sp|Q8A275|RECO_BACTN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|29340746|gb|AAO78537.1| DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] Length = 242 Score = 37.4 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 21/162 (12%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLV--- 54 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRTSFLVPVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 55 -RVNWRS---RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 + R+ + + S SS+ L+ L+R + E L Sbjct: 61 ADFRPNATLYRVKEAKSFY---PFTSIPYDPYKSSMALF---LAEFLYRAVREEAENRPL 114 Query: 111 YDMLNIF---LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + L L+ + + + L + +G +L Sbjct: 115 FAYLQHSVIWLDECREGFANFHLV--FLMRLSRFLGLYPNLE 154 >gi|323466384|gb|ADX70071.1| DNA repair protein recO [Lactobacillus helveticus H10] Length = 228 Score = 37.4 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 24/181 (13%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEF----------- 69 + ++MT+Q G V+ L+ + + + L ++G + Sbjct: 2 LAKIMTKQDGIITLIVKGA--------LRPKSQLSA---ATLNFSMGTYVIYTSGHGLSN 50 Query: 70 --RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 ++ ++ + Y + E +P + YD+ L Sbjct: 51 LRTYKEVKQFDGLYRDLTKNAYTSFIFDLIDHAFVEYQPLGKYYDLAVFALKKIDAGVDN 110 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 I +++ +L G +L CV+ G + + S K GG VC ++ + P Sbjct: 111 EMITQIVQMKMLSAFGVEPELRHCVICGKERGVFDYSIKLGGIVCSDHFAKVNSRLHLTP 170 Query: 188 S 188 Sbjct: 171 K 171 >gi|153809179|ref|ZP_01961847.1| hypothetical protein BACCAC_03490 [Bacteroides caccae ATCC 43185] gi|149128155|gb|EDM19375.1| hypothetical protein BACCAC_03490 [Bacteroides caccae ATCC 43185] Length = 242 Score = 37.4 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVAVPRSRKAAVKSVLFQPLSFIEFE 60 >gi|163742212|ref|ZP_02149600.1| CpaB family protein [Phaeobacter gallaeciensis 2.10] gi|161384542|gb|EDQ08923.1| CpaB family protein [Phaeobacter gallaeciensis 2.10] Length = 266 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%) Query: 1 MYWQDDAII-LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M +D+AI+ + V GE I +++ G +R S + L+ G+ V V W Sbjct: 85 ME-KDEAILAVKVTKPGEDAGITSRLSK--GMRAFAIRVDVSSGVSGFLRPGDHVDVYWT 141 Query: 60 SRLAQNLGEFRFEVLES 76 L G E Sbjct: 142 GSLNDQNGGRNGEFTRL 158 >gi|294646220|ref|ZP_06723874.1| DNA repair protein RecO [Bacteroides ovatus SD CC 2a] gi|294809113|ref|ZP_06767831.1| DNA repair protein RecO [Bacteroides xylanisolvens SD CC 1b] gi|292638438|gb|EFF56802.1| DNA repair protein RecO [Bacteroides ovatus SD CC 2a] gi|294443667|gb|EFG12416.1| DNA repair protein RecO [Bacteroides xylanisolvens SD CC 1b] Length = 264 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 17/160 (10%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLV--- 54 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 23 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIELE 82 Query: 55 -RVNWRS---RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 + R+ + + S SS+ L+ L+R + E L Sbjct: 83 ADYRPNATLYRVKEAKSFY---PFSSIPYDPYKSSMALFLS---EFLYRAIREEAENRPL 136 Query: 111 YDMLNIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLT 149 + L + + + L + +G +L Sbjct: 137 FAYLQHSIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLE 176 >gi|269120185|ref|YP_003308362.1| DNA repair protein RecO [Sebaldella termitidis ATCC 33386] gi|268614063|gb|ACZ08431.1| DNA repair protein RecO [Sebaldella termitidis ATCC 33386] Length = 219 Score = 37.0 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 24/42 (57%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + + I++ + E +++L+V T++YG+ ++ + + + Sbjct: 5 KTEGIVIKKTNVKEADLVLKVFTKEYGKIDIYINGIRKSKRR 46 >gi|191638503|ref|YP_001987669.1| DNA repair protein recO (Recombination protein O) [Lactobacillus casei BL23] gi|190712805|emb|CAQ66811.1| DNA repair protein recO (Recombination protein O) [Lactobacillus casei BL23] Length = 247 Score = 37.0 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 71/192 (36%), Gaps = 18/192 (9%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVRVNWRSRLAQ 64 + ++Y E +++++++T ++G+ + + ++ + IL R Sbjct: 1 MSRQNYRESDMLVKILTDRFGKKMFLL--NRARKPGFTLGAGIL-PFTHADYIGEVR-ES 56 Query: 65 NLGEFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLN---IFLN 119 L + + + +S + L Y + P+ P ++ + ++ Sbjct: 57 GLSYLSA-IKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQALYLID 115 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P +I + E+ +LK G + CV+ G L S GG +C++ Sbjct: 116 SGLDPQIIANVI---EVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNHWDKD 172 Query: 180 AEKMLVLPSFLW 191 ++ P ++ Sbjct: 173 PHRLHASPRVIF 184 >gi|166365593|ref|YP_001657866.1| DNA repair protein RecO [Microcystis aeruginosa NIES-843] gi|166087966|dbj|BAG02674.1| DNA repair protein [Microcystis aeruginosa NIES-843] Length = 260 Score = 37.0 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 64/162 (39%), Gaps = 14/162 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQP---ILQAGNLVRVN 57 +Q I L ++GE + +L ++T +YG + ++ ++ + NL+ V Sbjct: 6 YQATGINLQGMTFGEADRLLTILTAEYGLIRAIAPGARKYKSSLRGRSELFVVNNLLIVA 65 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDML-- 114 +S L + + E +ES+ KL + L Q + L + +P ELY+++ Sbjct: 66 GKS-LDK---VVQAETIESYP-KLSQNLAKLTVSQYLCELVLAIALSEQPQRELYELICG 120 Query: 115 -NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I Q L G + C++TG Sbjct: 121 HLARIEVLDENQYILPYLCQAIFHFLIIAGLVPQVHNCLLTG 162 >gi|237755372|ref|ZP_04584000.1| hypothetical protein SULYE_0030 [Sulfurihydrogenibium yellowstonense SS-5] gi|237692456|gb|EEP61436.1| hypothetical protein SULYE_0030 [Sulfurihydrogenibium yellowstonense SS-5] Length = 198 Score = 37.0 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI 47 M ++D+AI+L + GEK++ + V T++ G+ +++NGQ + P Sbjct: 1 METIYKDEAIVLNRKFVGEKDLTITVYTKKSGKESIYIQNGQYLKNMPY 49 >gi|188996541|ref|YP_001930792.1| hypothetical protein SYO3AOP1_0600 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931608|gb|ACD66238.1| hypothetical protein SYO3AOP1_0600 [Sulfurihydrogenibium sp. YO3AOP1] Length = 198 Score = 37.0 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI 47 M ++D+AI+L + GEK++ + V T++ G+ +++NGQ + P Sbjct: 1 METVYKDEAIVLNRKFVGEKDLTITVYTKKSGKESIYIQNGQYLKNMPY 49 >gi|194467793|ref|ZP_03073779.1| DNA repair protein RecO [Lactobacillus reuteri 100-23] gi|194452646|gb|EDX41544.1| DNA repair protein RecO [Lactobacillus reuteri 100-23] Length = 261 Score = 37.0 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 6/181 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 II+ + Y E++++++++T + G + FV+N + RM + + L + Sbjct: 10 GIIMYRQDYRERDLLVKMLTDKIGPAMFFVKNAKKRGFRMTADILPFT--HGTYIGSLDE 67 Query: 65 N-LGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 N L S K+ S S Y + + + + + L+ + Sbjct: 68 NGLSFINTASDTSQYKKIASDISKNAYVTYILALVDSAFNDGRSIGGWFKQVAAALDLIE 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I IE LL G +CVV G L S + GG +C++ + Sbjct: 128 KGLDEQIITNVIETQLLVAFGVAPVWDRCVVCGRNDLALDFSEQYGGMLCQNHWSLDEHR 187 Query: 183 M 183 + Sbjct: 188 L 188 >gi|262405439|ref|ZP_06081989.1| DNA repair protein RecO [Bacteroides sp. 2_1_22] gi|262356314|gb|EEZ05404.1| DNA repair protein RecO [Bacteroides sp. 2_1_22] Length = 242 Score = 37.0 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 9/156 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIELE 60 Query: 58 WRSRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R L +R + +S + L L+R + E L+ L Sbjct: 61 ADYRPNATL--YRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYL 118 Query: 115 NIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLT 149 + + + L + +G +L Sbjct: 119 QHSIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLE 154 >gi|331002902|ref|ZP_08326415.1| DNA repair protein RecO [Lachnospiraceae oral taxon 107 str. F0167] gi|330413195|gb|EGG92569.1| DNA repair protein RecO [Lachnospiraceae oral taxon 107 str. F0167] Length = 214 Score = 37.0 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 16/34 (47%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ 40 I++ G+ + + + T++ G+ F R + Sbjct: 9 GIVIKSMPIGDFDRRVTIFTKERGKVYAFARGAR 42 >gi|227529441|ref|ZP_03959490.1| possible recombination protein O [Lactobacillus vaginalis ATCC 49540] gi|227350642|gb|EEJ40933.1| possible recombination protein O [Lactobacillus vaginalis ATCC 49540] Length = 80 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 16/28 (57%) Query: 129 KIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL ++G+G++ T C +G Sbjct: 8 PALRRFELALLGHLGYGVNFTHCAGSGE 35 >gi|229495820|ref|ZP_04389548.1| DNA repair protein RecO [Porphyromonas endodontalis ATCC 35406] gi|229317394|gb|EEN83299.1| DNA repair protein RecO [Porphyromonas endodontalis ATCC 35406] Length = 248 Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 11/154 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV--------RNGQSHRMQPILQAGN 52 M AI+L R+Y +K I ++T + G + R+ + R+Q ++ + Sbjct: 1 MLISTRAIVLTTRAYNDKFAIAHLLTEEEGMVAYKIPKPSPSNRRSSATARLQRMVHPLS 60 Query: 53 LVRVNWRSRLAQNLGEF-RFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLEL 110 + + RL + L + E +L + + L+ L P E+ Sbjct: 61 ELSIVADHRLQRGLQQIDDAEYYRLSLNLMLYDQIKVNIAYFLAEALYHILRSAPPDPEV 120 Query: 111 YDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIG 143 Y ++ + + F + LL+ +G Sbjct: 121 YRYISRSIETLEESEKSCANFPITFLFGLLEPLG 154 >gi|227544910|ref|ZP_03974959.1| recombination protein O [Lactobacillus reuteri CF48-3A] gi|300910063|ref|ZP_07127523.1| recombination protein O [Lactobacillus reuteri SD2112] gi|227185122|gb|EEI65193.1| recombination protein O [Lactobacillus reuteri CF48-3A] gi|300892711|gb|EFK86071.1| recombination protein O [Lactobacillus reuteri SD2112] Length = 261 Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 6/181 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 II+ + Y E++++++++T + G + FV+N + RM + + L + Sbjct: 10 GIIMYRQDYRERDLLVKMLTDKIGPAMFFVKNAKKRGFRMTADILPFT--HGTYIGSLDE 67 Query: 65 N-LGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 N L S + S S Y + + + ++ + L+ + Sbjct: 68 NGLSFINTASDTSQYKNIASDISKNAYVTYILALVDSAFNDGRSIGGWFNQVAAALDLIE 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I IE LL G +CVV G L S + GG +C++ + Sbjct: 128 KGLDGQIITNIIETQLLVAFGVAPIWDRCVVCGRNDLALDFSEQYGGMLCQNHWSLDEHR 187 Query: 183 M 183 + Sbjct: 188 L 188 >gi|256828794|ref|YP_003157522.1| DNA repair protein RecO [Desulfomicrobium baculatum DSM 4028] gi|256577970|gb|ACU89106.1| DNA repair protein RecO [Desulfomicrobium baculatum DSM 4028] Length = 247 Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 M + + ++L V ++ E + + + +G F G+ R + Sbjct: 1 MEFSEKVLVLRVGTFREADCWVRFFSPTHGLLTAFAFGGRRSRKR 45 >gi|304439783|ref|ZP_07399681.1| recombination protein O [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371770|gb|EFM25378.1| recombination protein O [Peptoniphilus duerdenii ATCC BAA-1640] Length = 227 Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + + I+L R+ GE + L+V T G + + + Sbjct: 3 RTEGIVLSERNAGESSKALKVYTLDAGLVTIYAKGALKRSSK 44 >gi|218679382|ref|ZP_03527279.1| DNA repair protein RecO [Rhizobium etli CIAT 894] Length = 43 Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 4/28 (14%), Positives = 13/28 (46%) Query: 213 LNKYALQHNIIHCHLLRENFLGKLLELI 240 ++++ + I R+ F+ L+ + Sbjct: 1 MHRHVYEPRGIEAVAARDGFVQAALKAL 28 >gi|302335753|ref|YP_003800960.1| DNA replication and repair protein RecO [Olsenella uli DSM 7084] gi|301319593|gb|ADK68080.1| DNA replication and repair protein RecO [Olsenella uli DSM 7084] Length = 250 Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 60/204 (29%), Gaps = 48/204 (23%) Query: 3 WQDDAIILGVR-SYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW--- 58 ++ AI++ R E+++IL ++ + L+ G + Sbjct: 7 YRTKAIVVDRRTRLKEQDLILVLLAEDGSEKSVVAKGA--------LKPGGRLAARVDFF 58 Query: 59 --------RSRLAQ----------NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF 100 R R +L R ++ A + L + Sbjct: 59 GETDFLLARGRSLDVVAEASSTNAHL-AIRGDLARMSAASAICEVARLTCFADV------ 111 Query: 101 LPEREP--CLELYDMLNIFLNCHKIP--SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 R+P L ++ + L +L + G+ +L C G Sbjct: 112 ---RDPFLYPICSRALCACEEAGDQGHLDLVAAAYA---LKVLAHGGWRPELRFCTSCGD 165 Query: 157 TQDLLWVSPKSGGAVCRSVGLPYA 180 +D+ + S SGG +C S A Sbjct: 166 -EDVAFFSVASGGMLCASCAKDVA 188 >gi|116494997|ref|YP_806731.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus casei ATCC 334] gi|301066559|ref|YP_003788582.1| recombinational DNA repair protein [Lactobacillus casei str. Zhang] gi|116105147|gb|ABJ70289.1| DNA replication and repair protein RecO [Lactobacillus casei ATCC 334] gi|300438966|gb|ADK18732.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus casei str. Zhang] Length = 247 Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 75/204 (36%), Gaps = 14/204 (6%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQNLG 67 + ++Y E +++++++T ++G+ + + + + + R L Sbjct: 1 MSRQNYRESDMLVKILTDRFGKKMFLLNRARKPGFTLGAGILPFTHADYIGEVR-ESGLS 59 Query: 68 EFRFEVLESHCAKLLSSSLFL--YGLQSIVPLFRFLPEREPCLELYDMLN---IFLNCHK 122 + + + +S + L Y + P+ P ++ + ++ Sbjct: 60 YLSA-IKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQALYLIDSGL 118 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 P +I + E+ +LK G + CV+ G L S GG +C++ + Sbjct: 119 DPQIIANVI---EVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNHWDKDPHR 175 Query: 183 MLVLPS--FLWKEEQTIDADSLKS 204 + P F + T+D + ++ Sbjct: 176 LHASPRAIFYLRRFSTLDLNKVER 199 >gi|325284038|ref|YP_004256579.1| DNA repair protein recO [Deinococcus proteolyticus MRP] gi|324315847|gb|ADY26962.1| DNA repair protein recO [Deinococcus proteolyticus MRP] Length = 253 Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 19/123 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L + ++I+ ++T Q G+ R G + L + V + +R L Sbjct: 22 GVVLRRWKTPKGDLIVSLLTPQ-GKLRAIARGGLRGKHAGALNLFHHVGLQVYARPGDEL 80 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + LE +L LPER P L L L Sbjct: 81 AVIQQASLEGALPRL------------------ALPERHPYAHLLAELADLLFQEGEADE 122 Query: 127 IGK 129 G+ Sbjct: 123 YGQ 125 >gi|237716663|ref|ZP_04547144.1| DNA repair protein [Bacteroides sp. D1] gi|229442646|gb|EEO48437.1| DNA repair protein [Bacteroides sp. D1] Length = 241 Score = 36.3 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 18/160 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLV--- 54 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MQ-KTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIELE 59 Query: 55 -RVNWRS---RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 + R+ + + S SS+ L+ L+R + E L Sbjct: 60 ADYRPNATLYRVKEAKSFY---PFSSIPYDPYKSSMALFLS---EFLYRAIREEAENRPL 113 Query: 111 YDMLNIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLT 149 + L + + + L + +G +L Sbjct: 114 FAYLQHSIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLE 153 >gi|78213532|ref|YP_382311.1| DNA replication and repair protein RecO [Synechococcus sp. CC9605] gi|123577709|sp|Q3AI26|RECO_SYNSC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78197991|gb|ABB35756.1| DNA repair protein RecO [Synechococcus sp. CC9605] Length = 257 Score = 36.3 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 53/158 (33%), Gaps = 15/158 (9%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ---SHRMQPILQAGNLVRVNWRSRLA 63 + L V GE + +L +++ G V + S ++V RS Sbjct: 8 GLALKVGPLGEHDRLLSLLSNAEGVSRFAVPGARRPRSSLAAAAPLTLLELQVGGRS--- 64 Query: 64 QNLGEFRFEVLES--HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM----LNIF 117 G R L + L L Q++ L L +P L D L Sbjct: 65 ---GLARVRQLRVLRSFSGLGQQLETLAAAQALCDLCIQLAAEDPVEGLLDTMQLHLERL 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 P ++ VQ + LL G+GL L C +TG Sbjct: 122 EEHRADPELVLAGTVQACIHLLTLGGYGLPLQTCCITG 159 >gi|290769993|gb|ADD61760.1| putative protein [uncultured organism] Length = 247 Score = 36.3 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 18/35 (51%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS 41 +IL GE + L ++T++YG+ F + + Sbjct: 9 GMILSAMPVGEYDRRLVILTKEYGKITVFAKGARK 43 >gi|256027465|ref|ZP_05441299.1| DNA repair protein recO [Fusobacterium sp. D11] gi|289765427|ref|ZP_06524805.1| DNA repair protein recO [Fusobacterium sp. D11] gi|289716982|gb|EFD80994.1| DNA repair protein recO [Fusobacterium sp. D11] Length = 233 Score = 36.3 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 4/42 (9%), Positives = 17/42 (40%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + I++ + E + + + YG+ ++ + + + Sbjct: 5 RGKGIVISKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|238917281|ref|YP_002930798.1| DNA repair protein RecO (recombination protein O) [Eubacterium eligens ATCC 27750] gi|238872641|gb|ACR72351.1| DNA repair protein RecO (recombination protein O) [Eubacterium eligens ATCC 27750] Length = 247 Score = 36.3 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 18/35 (51%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS 41 +IL GE + L ++T++YG+ F + + Sbjct: 9 GMILSAMPVGEYDRRLVILTKEYGKITVFAKGARK 43 >gi|169839804|ref|ZP_02872992.1| recombination protein RecO [candidate division TM7 single-cell isolate TM7a] Length = 162 Score = 36.3 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 +AI+L +YGE + I++ T GR R + R + Sbjct: 33 EAIVLRRTNYGEADRIIQFSTPL-GRRSAMARGVRKSRSK 71 >gi|302560747|ref|ZP_07313089.1| DNA repair protein RecO [Streptomyces griseoflavus Tu4000] gi|302478365|gb|EFL41458.1| DNA repair protein RecO [Streptomyces griseoflavus Tu4000] Length = 147 Score = 36.3 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 102 PEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQ 158 E EP ++ Y +L L + + + LL+++ G+ T C G+ Sbjct: 11 HEGEPAVQQYLLLVGALRTLARGEHAPHLVL--DAFLLRSLAVNGYAPSFTDCARCGMPG 68 Query: 159 DLLWVSPKSGGAVCRSVGLP 178 + S SGG+VC +P Sbjct: 69 PNRFFSVGSGGSVCPDCRVP 88 >gi|330807393|ref|YP_004351855.1| toxin [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375501|gb|AEA66851.1| Putative toxin [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 927 Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 10/91 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + + R +GE LEV+T Q GR VR +P A N +R + L + Sbjct: 503 PGLEIRTR-HGE---RLEVITLQAGRCN--VRYLHWTEGRPSGIAANQMRYS----LDDH 552 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVP 96 LG E+ + S L G I Sbjct: 553 LGSSSLELDDQAALISQESYLPFGGTAWIAS 583 >gi|258405808|ref|YP_003198550.1| DNA repair protein RecO [Desulfohalobium retbaense DSM 5692] gi|257798035|gb|ACV68972.1| DNA repair protein RecO [Desulfohalobium retbaense DSM 5692] Length = 252 Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 65/165 (39%), Gaps = 16/165 (9%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW- 58 + + ++L V + E + + +++ G GF G R + L A + V+ + Sbjct: 4 EFTEPVVVLHVGLFREADCWVRLLSPSKGVVTGFAFGGMRSRRRFCGCLDAVSKVQFRFQ 63 Query: 59 RSRLAQNL----GEF--RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 RS+ + L G RF + +L + + L+ + + L E E++ Sbjct: 64 RSKRGEYLTLCEGALLDRFTGVRQRPGRL---GMAVNCLKFVEAVQ--LGEHGA-PEIFA 117 Query: 113 MLNIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 +L L P++ + + + G+ +L +C++ G Sbjct: 118 LLTQTLQLLDETPALEPVVPLFFRARVAFEHGYQPELDQCLLCGC 162 >gi|217967703|ref|YP_002353209.1| DNA repair protein RecO [Dictyoglomus turgidum DSM 6724] gi|217336802|gb|ACK42595.1| DNA repair protein RecO [Dictyoglomus turgidum DSM 6724] Length = 236 Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 21/41 (51%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 ++ IIL + GE +++L + ++ G+ L R + + Sbjct: 10 EEGIILFKKKVGEGDLLLTIYGKEKGKFLAIARGALKIKNR 50 >gi|163738371|ref|ZP_02145786.1| CpaB family protein [Phaeobacter gallaeciensis BS107] gi|161388292|gb|EDQ12646.1| CpaB family protein [Phaeobacter gallaeciensis BS107] Length = 286 Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 4/77 (5%) Query: 1 MYWQDDAII-LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M +D+AI+ + V GE I + + G +R S + L+ G+ V V W Sbjct: 105 ME-KDEAILAVKVTKPGEDAGITSRLAK--GMRAFAIRVDVSSGVSGFLRPGDHVDVYWT 161 Query: 60 SRLAQNLGEFRFEVLES 76 L G E Sbjct: 162 GSLNDQNGGRNGEFTRL 178 >gi|187734828|ref|YP_001876940.1| Recombination protein O RecO [Akkermansia muciniphila ATCC BAA-835] gi|187424880|gb|ACD04159.1| Recombination protein O RecO [Akkermansia muciniphila ATCC BAA-835] Length = 178 Score = 35.9 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 28/157 (17%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP------ILQAGNLVRVN 57 +A +L + GE +I T + G +R +P L R+ Sbjct: 2 NAEATVLKLYPLGENGLIAVWCTEE-----GLIRTAAKSARKPGSPFAGCLDIFYQCRMQ 56 Query: 58 W-RSRLAQNLGEFRFEVLESHCAKLLSSSLFL--------YGLQSIVPLFRFLPEREPCL 108 W +++ + ++ A LLS L L + L P Sbjct: 57 WTQAK--------KGDLHTLTSADLLSPRLALRKSYLRLSAAGYFARLFLQMLEPDTPIP 108 Query: 109 ELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFG 145 E YD+L + + + E L + G Sbjct: 109 EFYDLLQRAYTYLENNDPTLRAVLHFEQELARLHGIA 145 >gi|307634941|gb|ADI84687.2| glycosyltransferase [Geobacter sulfurreducens KN400] Length = 406 Score = 35.9 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 147 DLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAF 206 D+ +C+V ++ +++P +V S Y + P F+ ++ ++ ++ + Sbjct: 54 DVDRCIVNNCHVEIHYIAPALLKSVSGSNKSGYPSRRGPYPRFVAVFDKLLNVRTILAKL 113 Query: 207 QLTDYFLNKYALQHNII 223 + ++A H + Sbjct: 114 RTIK---KRHAYDHVHL 127 >gi|260495178|ref|ZP_05815306.1| DNA repair protein RecO [Fusobacterium sp. 3_1_33] gi|260197235|gb|EEW94754.1| DNA repair protein RecO [Fusobacterium sp. 3_1_33] Length = 233 Score = 35.9 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 16/39 (41%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 I++ + E + + + YG+ ++ + + + Sbjct: 8 GIVISKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|237832789|ref|XP_002365692.1| hypothetical protein TGME49_070150 [Toxoplasma gondii ME49] gi|211963356|gb|EEA98551.1| hypothetical protein TGME49_070150 [Toxoplasma gondii ME49] Length = 1841 Score = 35.9 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 7/84 (8%) Query: 154 TGVTQDLLWVSPKSG----GAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 G + +VSP++G AV R ++ L L ++ + Q++ Sbjct: 87 CGSRRAADFVSPQTGCVFSRAVSRVSAGVPRQRALSLKKGDTLPQRPPSHSDWERGRQMS 146 Query: 210 DYFLNKYALQHNIIHCHLLRENFL 233 FL ++ + + +F+ Sbjct: 147 -AFLRRFL--RKALASPRVHPSFI 167 >gi|15828630|ref|NP_325990.1| hypothetical protein MYPU_1590 [Mycoplasma pulmonis UAB CTIP] gi|14089572|emb|CAC13332.1| unknown; predicted coding region [Mycoplasma pulmonis] Length = 228 Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 12/71 (16%) Query: 7 AIILGVRSYGEKNIILEVM----TRQYGRHLGFVRNGQS--HRMQPILQAGNLVRV-NWR 59 I+L V+ Y E ++IL+V+ T + + + + L G++V ++ Sbjct: 8 GILLSVKDYSEHDVILKVLFIDSTE-----AILAKGIRKIESKNRSNLMVGSIVEFIYFK 62 Query: 60 SRLAQNLGEFR 70 +RL + + Sbjct: 63 ARLETKISRLK 73 >gi|296327609|ref|ZP_06870153.1| recombination protein O [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155255|gb|EFG96028.1| recombination protein O [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 48 Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 17/42 (40%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + II+ + E + + + YG+ ++ + + + Sbjct: 5 RGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|294784881|ref|ZP_06750169.1| DNA repair protein RecO [Fusobacterium sp. 3_1_27] gi|294486595|gb|EFG33957.1| DNA repair protein RecO [Fusobacterium sp. 3_1_27] Length = 233 Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 17/42 (40%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + II+ + E + + + YG+ ++ + + + Sbjct: 5 RGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|256845995|ref|ZP_05551453.1| DNA repair protein RecO [Fusobacterium sp. 3_1_36A2] gi|256719554|gb|EEU33109.1| DNA repair protein RecO [Fusobacterium sp. 3_1_36A2] Length = 233 Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 17/42 (40%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + II+ + E + + + YG+ ++ + + + Sbjct: 5 RGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|19704824|ref|NP_604386.1| DNA repair protein recO [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19715170|gb|AAL95686.1| DNA repair protein recO [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 233 Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 17/42 (40%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + II+ + E + + + YG+ ++ + + + Sbjct: 5 RGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|34762478|ref|ZP_00143477.1| DNA repair protein recO [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742600|ref|ZP_04573081.1| DNA repair protein recO [Fusobacterium sp. 4_1_13] gi|27887877|gb|EAA24946.1| DNA repair protein recO [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430248|gb|EEO40460.1| DNA repair protein recO [Fusobacterium sp. 4_1_13] Length = 233 Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 17/42 (40%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 + II+ + E + + + YG+ ++ + + + Sbjct: 5 RGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|126739277|ref|ZP_01754971.1| hypothetical protein RSK20926_22794 [Roseobacter sp. SK209-2-6] gi|126719894|gb|EBA16602.1| hypothetical protein RSK20926_22794 [Roseobacter sp. SK209-2-6] Length = 238 Score = 35.5 bits (81), Expect = 6.5, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 16/141 (11%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGN--LVRVNWRSRLAQNL 66 +L R G IL G + + P LQ G+ L+ + +R + Sbjct: 88 VLPKRLQGSYRKILPPF----GLDAAL-PGLTATALAPQLQPGSNLLLAAHGSAR--GQM 140 Query: 67 GEFRFEVLESHCAKLL-SSSLFLYGL---QSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 E S A LL + + + +I + + LPER CL + + + Sbjct: 141 AAMAAEQFASRLAPLLKGVPVEIGYVEQDPTIAQVTKDLPERSLCLPFFSQAGDHV-LYD 199 Query: 123 IPSVIGKIFVQIELMLLKNIG 143 +P + + E+ +L G Sbjct: 200 LPQSLAAA--KWEIPILPVTG 218 >gi|282858169|ref|ZP_06267364.1| DNA repair protein RecO [Pyramidobacter piscolens W5455] gi|282584091|gb|EFB89464.1| DNA repair protein RecO [Pyramidobacter piscolens W5455] Length = 247 Score = 35.5 bits (81), Expect = 6.6, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 51/182 (28%), Gaps = 31/182 (17%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L +Y E +I + + G + +V M+ G L W Sbjct: 30 GVVLRRGNYMEGDIAALLFLKSGGTNWVYVPGASKGSMRFG---GALEPFVW-------- 78 Query: 67 GEFR------------FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 G ++ EV E A + ++ L R L P +L + Sbjct: 79 GHYQLYQSKRKTYLKEIEVTEDFWALRRHPRAVIQAVRWAKMLERHLIPGYPYDDLLALF 138 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + + L + G DL C G P G AV R Sbjct: 139 YWALKALSEGVAPELLDARFLWRWLLSWGIAPDLRSCGSCGK--------PLGGRAVWRE 190 Query: 175 VG 176 Sbjct: 191 GT 192 >gi|195339154|ref|XP_002036185.1| GM13089 [Drosophila sechellia] gi|194130065|gb|EDW52108.1| GM13089 [Drosophila sechellia] Length = 326 Score = 35.1 bits (80), Expect = 8.1, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 2 YWQDDAIILGVRSYGEKNIILE 23 W+DD I +G R++ E + I Sbjct: 187 EWRDDGIAIGSRAHLENDAIAT 208 >gi|24582769|ref|NP_609202.1| wollknaeuel [Drosophila melanogaster] gi|7297373|gb|AAF52633.1| wollknaeuel [Drosophila melanogaster] gi|20151371|gb|AAM11045.1| GH09240p [Drosophila melanogaster] gi|220944034|gb|ACL84560.1| CG7870-PA [synthetic construct] gi|220954018|gb|ACL89552.1| CG7870-PA [synthetic construct] Length = 326 Score = 35.1 bits (80), Expect = 8.8, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 2 YWQDDAIILGVRSYGEKNIILE 23 W+DD I +G R++ E + I Sbjct: 187 EWRDDGIAIGSRAHLENDAIAT 208 >gi|195472975|ref|XP_002088772.1| GE11069 [Drosophila yakuba] gi|194174873|gb|EDW88484.1| GE11069 [Drosophila yakuba] Length = 326 Score = 35.1 bits (80), Expect = 8.8, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 2 YWQDDAIILGVRSYGEKNIILE 23 W+DD I +G R++ E + I Sbjct: 187 EWRDDGIAIGSRAHLENDAIAT 208 >gi|195577526|ref|XP_002078620.1| GD22423 [Drosophila simulans] gi|194190629|gb|EDX04205.1| GD22423 [Drosophila simulans] Length = 326 Score = 35.1 bits (80), Expect = 8.9, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 2 YWQDDAIILGVRSYGEKNIILE 23 W+DD I +G R++ E + I Sbjct: 187 EWRDDGIAIGSRAHLENDAIAT 208 >gi|283852419|ref|ZP_06369688.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Desulfovibrio sp. FW1012B] gi|283572157|gb|EFC20148.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Desulfovibrio sp. FW1012B] Length = 220 Score = 35.1 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH 42 +DA++L G+ + +MT+ GR G V Sbjct: 33 EDALVLAKVREGDVDAYARLMTKYQGRVSGIVSGHAPR 70 >gi|166710462|ref|ZP_02241669.1| hypothetical protein Xoryp_03035 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 812 Score = 35.1 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 9/56 (16%) Query: 15 YGEKNIILEVMTRQYGRHLGFVRNGQSHR------MQPILQAGNLVRVNWRSRLAQ 64 +G+ L+V GRH R GQ ++ LQ G+ + WR+ L Sbjct: 310 HGDTAA-LDVTRNAQGRHAVATRAGQGRADGELRWIRGALQPGSQLH--WRAPLHD 362 >gi|225570968|ref|ZP_03779991.1| hypothetical protein CLOHYLEM_07072 [Clostridium hylemonae DSM 15053] gi|225160430|gb|EEG73049.1| hypothetical protein CLOHYLEM_07072 [Clostridium hylemonae DSM 15053] Length = 239 Score = 34.7 bits (79), Expect = 9.5, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 17/34 (50%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS 41 ++L GE + + ++T++ G+ F R + Sbjct: 1 MVLHASPIGEYDRRVVILTKERGKISAFARGARK 34 >gi|42524457|ref|NP_969837.1| hypothetical protein Bd3065 [Bdellovibrio bacteriovorus HD100] gi|39576666|emb|CAE80830.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio bacteriovorus HD100] Length = 186 Score = 34.7 bits (79), Expect = 9.5, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 6/137 (4%) Query: 13 RSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVNWRSRLAQNLGEF 69 Y E ++IL ++ Q + R + + +L+ + V + ++ + Sbjct: 1 MKYSESDLILHAISTQGEKLSFMARGALKSKKRFGGGVLEPTHFVSLTYKQSAEEGKLHV 60 Query: 70 RFEV-LESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLE-LYDMLNIFLNCHKIPSV 126 E L + A L + L L + + + E + E L+++L L + Sbjct: 61 LQEATLINDFAGLRTDYDRLELALHILECVSKVSQEGDRHSEFLFNLLGHTLRALETAQD 120 Query: 127 IGKIFVQIELMLLKNIG 143 + + L L G Sbjct: 121 PLIVKMHFYLKFLLQQG 137 >gi|294666060|ref|ZP_06731320.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604161|gb|EFF47552.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 811 Score = 34.7 bits (79), Expect = 9.7, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 30/130 (23%) Query: 15 YGEKNIILEVMTRQYGRHLGFVRNGQSHR------MQPILQAGNLVRVNWRSRLAQN--- 65 +G+ L+V GRH R G+ ++ LQ G+ + WR+ L + Sbjct: 316 HGDTAA-LDVARHAQGRHTLATRPGKGRADGELRWIRGALQPGSQLH--WRAPLHDSTRA 372 Query: 66 ----LGEFRFE-------------VLESHCAKLLSSSLFLYGLQS-IVPLFRFLPEREPC 107 LGE + + L + + + G Q + + LP Sbjct: 373 SAALLGELTAQLQVDQNMRLTVSMPEPADAGLTLDADVRVQGRQLPVQSMRSLLPRTSGH 432 Query: 108 LELYDMLNIF 117 L+ L+ Sbjct: 433 ARLHWQLSSL 442 >gi|124515729|gb|EAY57238.1| Recombination protein O (RecO) [Leptospirillum rubarum] Length = 246 Score = 34.7 bits (79), Expect = 9.7, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 28/186 (15%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L Y E + ++ +R+ G GF R + G + L+ L Sbjct: 5 ALVLRSVRYLESDRVVTFFSREEGVLTGFARGATGMSNRF----GASLEPL---TLSTIL 57 Query: 67 GEFRFEVLESHC-------------AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 G F E + L G++ ++ L P ++D+ Sbjct: 58 GRFHLEGTLYRIHKASIVNPFSYVKSDLDRCYWAGMGIRLLLGLLPP---ALPEPPVFDL 114 Query: 114 LNIFLNCHKIPSVIGK-IFVQIELMLLKNIGFGL---DLTKCVVTGVTQDLLWVSPKSGG 169 +L + +++ L +G+ + D + C + L + P G Sbjct: 115 AVNYLELLSAQKISPAFAWIRFAASALDLLGYQIRADDCSLCKESPFGNSLFYY-PMDGR 173 Query: 170 AVCRSV 175 +C Sbjct: 174 VLCSRC 179 >gi|323483768|ref|ZP_08089148.1| DNA repair protein RecO [Clostridium symbiosum WAL-14163] gi|323692741|ref|ZP_08106969.1| DNA repair protein RecO [Clostridium symbiosum WAL-14673] gi|323402959|gb|EGA95277.1| DNA repair protein RecO [Clostridium symbiosum WAL-14163] gi|323503183|gb|EGB19017.1| DNA repair protein RecO [Clostridium symbiosum WAL-14673] Length = 215 Score = 34.7 bits (79), Expect = 9.8, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV 56 ++L GE + L ++T++ G+ F R + + G+L+R Sbjct: 9 GMVLSAFPVGEYDKRLVILTKERGKITAFARGAK--------RPGSLLRA 50 >gi|34499185|ref|NP_903400.1| GntR family transcriptional regulator [Chromobacterium violaceum ATCC 12472] gi|34105036|gb|AAQ61392.1| probable transcriptional regulator, GntR family [Chromobacterium violaceum ATCC 12472] Length = 229 Score = 34.7 bits (79), Expect = 9.8, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 4/77 (5%) Query: 31 RHLGF--VRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFL 88 + G VR G ++ I+ G +R R+ L ++L E R +LE A+L + Sbjct: 58 LYAGLLEVRQGDGTYVRAIVNPGEAMRALSRASLREHL-EVRC-LLEESAARLAAERAGA 115 Query: 89 YGLQSIVPLFRFLPERE 105 + I L R+ Sbjct: 116 GDIARIAATLDGLQRRD 132 >gi|15639623|ref|NP_219073.1| hypothetical protein TP0636 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025861|ref|YP_001933633.1| hypothetical protein TPASS_0636 [Treponema pallidum subsp. pallidum SS14] gi|3322934|gb|AAC65610.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018436|gb|ACD71054.1| hypothetical protein TPASS_0636 [Treponema pallidum subsp. pallidum SS14] Length = 256 Score = 34.7 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 26/197 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTR---QYGRHLGFVRNGQSHRMQPILQA---GNLVRV 56 W A++L + ++GE + + + R + + G +++ ++ G V V Sbjct: 8 WYAQALVLSLSAFGEGHKSVTLFVRLQDEAFILRAALFGGAQSKLRGLVIPYTTG-RVWV 66 Query: 57 NWRSRLAQN-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 R + + + +F S A L S + + + + E + ++ Sbjct: 67 YSNPRTSMHKIVDFSV--THSRVA-LRDSIVRV----WCAAICVDIIEASKGTISWTLVT 119 Query: 116 IFLN--CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA--- 170 FL+ ++ +L G ++T C TQ + VS S A Sbjct: 120 AFLDGISLSSDGACKHALLRFLWRVLIGEGVAPNITSCSRC-ATQYAVSVSGVSRVAYLT 178 Query: 171 -----VCRSVGLPYAEK 182 VC + P + Sbjct: 179 QGESFVCAACAAPAEHR 195 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.166 0.515 Lambda K H 0.267 0.0507 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,475,217,207 Number of Sequences: 14124377 Number of extensions: 266386495 Number of successful extensions: 726942 Number of sequences better than 10.0: 1940 Number of HSP's better than 10.0 without gapping: 1797 Number of HSP's successfully gapped in prelim test: 547 Number of HSP's that attempted gapping in prelim test: 722548 Number of HSP's gapped (non-prelim): 2442 length of query: 240 length of database: 4,842,793,630 effective HSP length: 135 effective length of query: 105 effective length of database: 2,936,002,735 effective search space: 308280287175 effective search space used: 308280287175 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 80 (35.1 bits)