HHsearch alignment for GI: 254780949 and conserved domain: PRK00750
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed.
Probab=98.13 E-value=3.6e-05 Score=54.43 Aligned_cols=209 Identities=14% Similarity=0.151 Sum_probs=128.0
Q ss_pred CCCEEEEEEECCCCCCCCHHHH----HHHHHHHHHHHC-CCEEEEEE--ECHHHC-----------------------CC
Q ss_conf 4981899984378762024348----999999999985-98499998--260111-----------------------44
Q gi|254780949|r 33 QGVVTAYIGYDLTASSLHAGHL----TQLMLLFWLQKT-GHKPISLM--GGGTSI-----------------------IG 82 (418)
Q Consensus 33 ~~~~~~y~G~DpT~~slH~G~l----~~~~~l~~~q~~-Gh~~i~li--G~~T~~-----------------------IG 82 (418)
T Consensus 28 ~~~vv~~tG~~pSG~-~HiG~~~Ev~~~~~V~~al~~~~g~~~~~i~~~Dd~D~lRkvp~~~p~~e~~~~~lg~Pl~~iP 106 (513)
T PRK00750 28 KGEVLFETGYGPSGL-PHIGTFGEVARTTMVRRALRDLTGIKTRLIYFSDDMDGLRKVPDNVPNQEMLAEHLGKPLTSVP 106 (513)
T ss_pred CCEEEEECCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf 873999368689988-6230452266699999999984599668999851776543468899984999987499664079
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 889886210246889999999999999887653267776402330167523431346888752234-4787534788887
Q gi|254780949|r 83 DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF-SVNRMLSFESVRS 161 (418)
Q Consensus 83 DPsgk~~~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~-~v~~mL~rd~v~~ 161 (418)
T Consensus 107 dP~g~~-------~Sya~h~~~~~~~~l~~~------gi~~e~~s~te~Y~sG~f~~~i~~~l~~~~~I~~Il~~~~~~~ 173 (513)
T PRK00750 107 DPFGTH-------ESYAEHNNARLREFLDKF------GFEYEFISATECYKSGRFDEALLKALEKYDEIMAILLPTLGEE 173 (513)
T ss_pred CCCCCC-------CCHHHHHHHHHHHHHHHC------CCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 988875-------769999999999999983------9833997678766448669999999985999999999843866
Q ss_pred H----------------C--------CCCC-CCCH-----HHHHHHHHHH-------HHHHHHHHHCCCCEECCCCHHHH
Q ss_conf 4----------------0--------3568-8315-----7889898989-------99999985429702015412588
Q gi|254780949|r 162 R----------------L--------KREQ-SLSF-----LEFNYMILQA-------YDFVELAKNYDCRLQMGGSDQWG 204 (418)
Q Consensus 162 R----------------l--------~~~~-~is~-----~EF~Y~llQa-------yD~~~L~~~~~~~iqiGGsDQwg 204 (418)
T Consensus 174 ~~~~~~P~~piC~~cGkv~~t~v~~~d~~~~~v~y~~~cG~~~~~~~~~g~~KL~WrvDW~mRW~~~~Vd~Ep~GKDh~~ 253 (513)
T PRK00750 174 RQATYSPFLPICPKCGKVLQVPVISVDADAGTITYDDECGHEGEVPVTGGHVKLQWKVDWPMRWAALGVDFEPAGKDHIS 253 (513)
T ss_pred CCCCEEEEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
T ss_conf 67871477876188895520468999779988999849998787636688543466256554411106430346511212
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECEEECCCCHHHHHHHHCCCCCCCC--CCCHH
Q ss_conf 9988899997316797179831102368710223543101233345--79979
Q gi|254780949|r 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE--MTSPY 255 (418)
Q Consensus 205 Ni~~G~eLir~~~~~~~~glT~PLLt~~dG~KmgKS~~naIwLd~~--~tSPy 255 (418)
T Consensus 254 S~~~~~~I~~i~g~~pP~~~~YE~fLd~~G~KmSsSkGngit~~ewL~~~~PE 306 (513)
T PRK00750 254 SYDTSSRICEILGGEPPEGFMYELFLDGKGQKISKSKGNGISIEDWLEYAPPE 306 (513)
T ss_pred CHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCCCCCCHHHHHHHCCHH
T ss_conf 07679999998389999998722798379866305689723899999755999