HHsearch alignment for GI: 254780949 and conserved domain: PRK10700
>PRK10700 23S rRNA pseudouridylate synthase B; Provisional.
Probab=95.16 E-value=0.059 Score=33.18 Aligned_cols=46 Identities=20% Similarity=0.280 Sum_probs=25.8
Q ss_pred HHHHHHHC-----------CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 22354310-----------12333457997999998862078889879975068885675554
Q gi|254780949|r 236 KMGKTLSG-----------AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287 (418)
Q Consensus 236 KmgKS~~n-----------aIwLd~~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l 287 (418)
T Consensus 198 RMf~~~G~~V~~LkRi~iG~i~L~~~Lp-----~G~wR~Lt~~Ev~~-Lr~~v~l~~~~~~~~ 254 (291)
T PRK10700 198 RLWEAVGVQVSRLIRVRYGDIPLPKGLP-----RGGWTELDLAQTNY-LRELVELPPETSSKV 254 (291)
T ss_pred HHHHHCCCEEEEEEEEEECCEECCCCCC-----CCCCEECCHHHHHH-HHHHCCCCCCCCCCC
T ss_conf 9999859979188999987763589998-----96771899999999-999819991013555