HHsearch alignment for GI: 254780949 and conserved domain: PRK10839
>PRK10839 16S rRNA pseudouridylate synthase A; Provisional.
Probab=97.20 E-value=0.00076 Score=45.64 Aligned_cols=44 Identities=18% Similarity=0.269 Sum_probs=38.2
Q ss_pred CHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECHHH
Q ss_conf 889999984997886899999876987988798048000237777
Q gi|254780949|r 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395 (418)
Q Consensus 351 ~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~~~d 395 (418)
T Consensus 2 RL~K~La~~g~~-SRR~ae~lI~~GrV~VNg~~v~~~~~~V~~~~ 45 (231)
T PRK10839 2 RLDKFIAQQLGV-SRAIAGREIRGNRVTVDGEIVKNAAFKLLPEH 45 (231)
T ss_pred CHHHHHHHCCCC-CHHHHHHHHHCCEEEECCEEECCCCEECCCCC
T ss_conf 378999887895-69999999987979999999145880849998