HHsearch alignment for GI: 254780949 and conserved domain: PRK10839

>PRK10839 16S rRNA pseudouridylate synthase A; Provisional.
Probab=97.20  E-value=0.00076  Score=45.64  Aligned_cols=44  Identities=18%  Similarity=0.269  Sum_probs=38.2

Q ss_pred             CHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECHHH
Q ss_conf             889999984997886899999876987988798048000237777
Q gi|254780949|r  351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD  395 (418)
Q Consensus       351 ~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~~~d  395 (418)
T Consensus         2 RL~K~La~~g~~-SRR~ae~lI~~GrV~VNg~~v~~~~~~V~~~~   45 (231)
T PRK10839          2 RLDKFIAQQLGV-SRAIAGREIRGNRVTVDGEIVKNAAFKLLPEH   45 (231)
T ss_pred             CHHHHHHHCCCC-CHHHHHHHHHCCEEEECCEEECCCCEECCCCC
T ss_conf             378999887895-69999999987979999999145880849998