HHsearch alignment for GI: 254780949 and conserved domain: PRK12284
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed.
Probab=99.82 E-value=1.8e-18 Score=142.16 Aligned_cols=250 Identities=16% Similarity=0.172 Sum_probs=165.0
Q ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHH-HH-HHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 818999843787620243489999999-99-9859849999826011144889886210246889999999999999887
Q gi|254780949|r 35 VVTAYIGYDLTASSLHAGHLTQLMLLF-WL-QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS 112 (418)
Q Consensus 35 ~~~~y~G~DpT~~slH~G~l~~~~~l~-~~-q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~~ 112 (418)
T Consensus 2 ~~RILSGIqPTG~-lHLGNY~GAik~~v~~~~q~~~e~f~fIAD~HALT~----------~~dp~~l~~~t~ei---aa~ 67 (436)
T PRK12284 2 TTRVLTGITTTGT-PHLGNYVGAIRPAIAASRQPGVESFYFLADYHALIK----------CDDPARIQRSTLEI---AAT 67 (436)
T ss_pred CCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----------CCCHHHHHHHHHHH---HHH
T ss_conf 9730457488997-528889999999999863899866999964000568----------89999999999999---999
Q ss_pred HHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----H---CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6532677764023301675234313468887522344787534788887-----4---0356883157889898989999
Q gi|254780949|r 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS-----R---LKREQSLSFLEFNYMILQAYDF 184 (418)
Q Consensus 113 ~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~-----R---l~~~~~is~~EF~Y~llQayD~ 184 (418)
T Consensus 68 ~LA~GlDPekst~f~QS~VPE~~EL~wiL---s~~t~~g~L~R~~~yK~~~dkn~~~g~d~d~~v~~GLf~YPVLMAADI 144 (436)
T PRK12284 68 WLAAGLDPERVTFYRQSDIPEIPELTWLL---TCVAGKGLLNRAHAYKAAVDKNVAAGEDPDAGVTAGLFMYPVLMAADI 144 (436)
T ss_pred HHHCCCCCCCCEEEECCCCHHHHHHHHHH---HCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99858680222588788877999999999---763848887510302117677776265754454431224707888767
Q ss_pred HHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCC---CCCEEEEEE-------CEEECCCCHHHHHHHHCCCCCCCCCCCH
Q ss_conf 999854297020154125889988899997316---797179831-------1023687102235431012333457997
Q gi|254780949|r 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFALTS-------PLLTTASGTKMGKTLSGAIWLNKEMTSP 254 (418)
Q Consensus 185 ~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~---~~~~~glT~-------PLLt~~dG~KmgKS~~naIwLd~~~tSP 254 (418)
T Consensus 145 Lly~A~-~VPV---G~DQ~QHlEltRdIA~rFN~~YG~e~F~~Pea~i~e~~a~lpGlDGrKMSKSy~NtI~Lf---~~~ 217 (436)
T PRK12284 145 LMFNAH-KVPV---GRDQIQHIEMARDIAQRFNHLYGGEFFVLPEAVIEESVATLPGLDGRKMSKSYDNTIPLF---SPR 217 (436)
T ss_pred HHCCCC-CCCC---CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCH
T ss_conf 740687-5126---755699999999999999987088363788442368877224999870557889806487---896
Q ss_pred HHHHHHHHHH-CH------------HHHHHHHHHHCCCCHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHH
Q ss_conf 9999988620-78------------8898799750688856755543332--1022026889899999973
Q gi|254780949|r 255 YNFWQYWRNI-DD------------ADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMV 310 (418)
Q Consensus 255 y~fyQf~~n~-~D------------~dV~kyLklfT~l~l~EI~~l~~~~--~~~pr~aKk~LA~EiT~lv 310 (418)
T Consensus 218 k~l~K~I~~ivTDS~~~~ePkdp~~~~lf~iy~afa--~~~~~~~l~~~y~~G~G~G~~K~~L~e~i~~~l 286 (436)
T PRK12284 218 EELKKAIFRIVTDSRAPGEPKDPEGSALFQLYQAFA--TPEETAAFRQALADGIAWGDAKQRLFERIDREL 286 (436)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHC--CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 999998505737999988889987581999999868--935699999998768768999999999999986