HHsearch alignment for GI: 254780949 and conserved domain: PRK12285

>PRK12285 tryptophanyl-tRNA synthetase; Reviewed.
Probab=99.89  E-value=8.1e-21  Score=157.59  Aligned_cols=282  Identities=19%  Similarity=0.161  Sum_probs=202.4

Q ss_pred             HHHCCCHHHCCCHHH-HHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCC
Q ss_conf             996892002299899-9998514981899984378762024348999999999985984999982601114488988621
Q gi|254780949|r   12 LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES   90 (418)
Q Consensus        12 L~~Rg~i~~~~~~~~-l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~   90 (418)
T Consensus        42 ~lrRgifF~HRd~d~ild~~e~g~~f~lyTGrgPSg~-mHlGH~ipf~~~k~lQ~fg~~l~I~iaDdEkfl--------~  112 (369)
T PRK12285         42 LMRRGIIFGHRDYDKILKAYKNGKPFAVYTGRMPSGK-MHIGHKMVFDQLKWFQEFGADVYIQIADLEAYS--------A  112 (369)
T ss_pred             CEECCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHH--------H
T ss_conf             2254576643779999999983997699936688887-552015099999999987996899935579987--------2


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             02468899999999999998876532677764023301675234313468887522344787534788887403568831
Q gi|254780949|r   91 RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS  170 (418)
Q Consensus        91 R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is  170 (418)
T Consensus       113 r-~~t~ee~~~~a--~eenikdiiAlGfdp~kT~i~~~s~~~~-~--y~~~~~~~k~~t~~~~~------~ifGf~~s~n  180 (369)
T PRK12285        113 R-GMSLEETREIA--IEEYILNYIALGFDPDKTHIYFQSENIK-V--YDLAFELAKKVNFSEVK------AIYGFTGSTN  180 (369)
T ss_pred             C-CCCHHHHHHHH--HHHHHHHHHHCCCCCCCEEEEECCCCHH-H--HHHHHHHHHHHHHHHHH------HHHCCCCCCC
T ss_conf             7-99899999999--9988888987087800028997576378-9--99999999986099999------8709999996


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCC---CEECCCCHHHHHHHHHHHHHHHC----CCCCEEEEEECEEECCCCHHHHHHHHC
Q ss_conf             57889898989999999854297---02015412588998889999731----679717983110236871022354310
Q gi|254780949|r  171 FLEFNYMILQAYDFVELAKNYDC---RLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGTKMGKTLSG  243 (418)
Q Consensus       171 ~~EF~Y~llQayD~~~L~~~~~~---~iqiGGsDQwgNi~~G~eLir~~----~~~~~~glT~PLLt~~dG~KmgKS~~n  243 (418)
T Consensus       181 ig~i~~p~~Qaa~~~~p~~~~~~~~~cLiP~giDQDP~fRltRDiA~r~~~~lg~~kPa~ih~~flpgL~G~KMSsS~p~  260 (369)
T PRK12285        181 IGHIFAPATQAADILHPQLDEYGPKPVVVPVGIDQDPHIRLTRDIAERMRISLGFIKPASTYHKFMTGLTGGKMSSSKPE  260 (369)
T ss_pred             CEEEECCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             31343018763124243543458863265403454468899998888740114888727775114567788987689998


Q ss_pred             -CCCCCCCCCCHHHHHHHHHHH-----------------CHHHHH-HHHHHHCCCCHHHHHHHHHHHH-CCC--CHHHHH
Q ss_conf             -123334579979999988620-----------------788898-7997506888567555433321-022--026889
Q gi|254780949|r  244 -AIWLNKEMTSPYNFWQYWRNI-----------------DDADVV-SFAKRLTTLPMSEIDRMAKLQG-KEI--NEAKKI  301 (418)
Q Consensus       244 -aIwLd~~~tSPy~fyQf~~n~-----------------~D~dV~-kyLklfT~l~l~EI~~l~~~~~-~~p--r~aKk~  301 (418)
T Consensus       261 saI~lt---Dtp~~ikkKIk~AfSGGr~T~EEhr~~Gg~p~vdv~yq~~~~ff~eDD~~L~~i~~~y~~G~~l~Ge~K~~  337 (369)
T PRK12285        261 SAIYLT---DDPETAKKKIKNALTGGRPTLEEQRKLGGNPEKCVVYELYLYHLIEDDKELKEIYEECRSGKLLCGECKRE  337 (369)
T ss_pred             CEEEEC---CCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             536850---89999999999854279877999998589985124689999981466899999999844786526999999


Q ss_pred             HHHHHHHHHHHHCHHH
Q ss_conf             8999999730000046
Q gi|254780949|r  302 IATEITTMVHGREEAE  317 (418)
Q Consensus       302 LA~EiT~lvHGe~~a~  317 (418)
T Consensus       338 ~ie~l~~~l~~hqekR  353 (369)
T PRK12285        338 AAEKIQEFLKEHQEKR  353 (369)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999999999