HHsearch alignment for GI: 254780949 and conserved domain: PRK12285
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed.
Probab=99.89 E-value=8.1e-21 Score=157.59 Aligned_cols=282 Identities=19% Similarity=0.161 Sum_probs=202.4
Q ss_pred HHHCCCHHHCCCHHH-HHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCC
Q ss_conf 996892002299899-9998514981899984378762024348999999999985984999982601114488988621
Q gi|254780949|r 12 LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90 (418)
Q Consensus 12 L~~Rg~i~~~~~~~~-l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~ 90 (418)
T Consensus 42 ~lrRgifF~HRd~d~ild~~e~g~~f~lyTGrgPSg~-mHlGH~ipf~~~k~lQ~fg~~l~I~iaDdEkfl--------~ 112 (369)
T PRK12285 42 LMRRGIIFGHRDYDKILKAYKNGKPFAVYTGRMPSGK-MHIGHKMVFDQLKWFQEFGADVYIQIADLEAYS--------A 112 (369)
T ss_pred CEECCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHH--------H
T ss_conf 2254576643779999999983997699936688887-552015099999999987996899935579987--------2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 02468899999999999998876532677764023301675234313468887522344787534788887403568831
Q gi|254780949|r 91 RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170 (418)
Q Consensus 91 R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is 170 (418)
T Consensus 113 r-~~t~ee~~~~a--~eenikdiiAlGfdp~kT~i~~~s~~~~-~--y~~~~~~~k~~t~~~~~------~ifGf~~s~n 180 (369)
T PRK12285 113 R-GMSLEETREIA--IEEYILNYIALGFDPDKTHIYFQSENIK-V--YDLAFELAKKVNFSEVK------AIYGFTGSTN 180 (369)
T ss_pred C-CCCHHHHHHHH--HHHHHHHHHHCCCCCCCEEEEECCCCHH-H--HHHHHHHHHHHHHHHHH------HHHCCCCCCC
T ss_conf 7-99899999999--9988888987087800028997576378-9--99999999986099999------8709999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCC---CEECCCCHHHHHHHHHHHHHHHC----CCCCEEEEEECEEECCCCHHHHHHHHC
Q ss_conf 57889898989999999854297---02015412588998889999731----679717983110236871022354310
Q gi|254780949|r 171 FLEFNYMILQAYDFVELAKNYDC---RLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGTKMGKTLSG 243 (418)
Q Consensus 171 ~~EF~Y~llQayD~~~L~~~~~~---~iqiGGsDQwgNi~~G~eLir~~----~~~~~~glT~PLLt~~dG~KmgKS~~n 243 (418)
T Consensus 181 ig~i~~p~~Qaa~~~~p~~~~~~~~~cLiP~giDQDP~fRltRDiA~r~~~~lg~~kPa~ih~~flpgL~G~KMSsS~p~ 260 (369)
T PRK12285 181 IGHIFAPATQAADILHPQLDEYGPKPVVVPVGIDQDPHIRLTRDIAERMRISLGFIKPASTYHKFMTGLTGGKMSSSKPE 260 (369)
T ss_pred CEEEECCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 31343018763124243543458863265403454468899998888740114888727775114567788987689998
Q ss_pred -CCCCCCCCCCHHHHHHHHHHH-----------------CHHHHH-HHHHHHCCCCHHHHHHHHHHHH-CCC--CHHHHH
Q ss_conf -123334579979999988620-----------------788898-7997506888567555433321-022--026889
Q gi|254780949|r 244 -AIWLNKEMTSPYNFWQYWRNI-----------------DDADVV-SFAKRLTTLPMSEIDRMAKLQG-KEI--NEAKKI 301 (418)
Q Consensus 244 -aIwLd~~~tSPy~fyQf~~n~-----------------~D~dV~-kyLklfT~l~l~EI~~l~~~~~-~~p--r~aKk~ 301 (418)
T Consensus 261 saI~lt---Dtp~~ikkKIk~AfSGGr~T~EEhr~~Gg~p~vdv~yq~~~~ff~eDD~~L~~i~~~y~~G~~l~Ge~K~~ 337 (369)
T PRK12285 261 SAIYLT---DDPETAKKKIKNALTGGRPTLEEQRKLGGNPEKCVVYELYLYHLIEDDKELKEIYEECRSGKLLCGECKRE 337 (369)
T ss_pred CEEEEC---CCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 536850---89999999999854279877999998589985124689999981466899999999844786526999999
Q ss_pred HHHHHHHHHHHHCHHH
Q ss_conf 8999999730000046
Q gi|254780949|r 302 IATEITTMVHGREEAE 317 (418)
Q Consensus 302 LA~EiT~lvHGe~~a~ 317 (418)
T Consensus 338 ~ie~l~~~l~~hqekR 353 (369)
T PRK12285 338 AAEKIQEFLKEHQEKR 353 (369)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999999