HHsearch alignment for GI: 254780949 and conserved domain: PRK13354
>PRK13354 tyrosyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=1058.29 Aligned_cols=392 Identities=34% Similarity=0.546 Sum_probs=371.5
Q ss_pred HHHHHHH-HCCCHHHCCCHHHHHHHHH-----CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHC
Q ss_conf 9999999-6892002299899999851-----498189998437876202434899999999998598499998260111
Q gi|254780949|r 7 DFLSILS-ERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80 (418)
Q Consensus 7 ~~~~~L~-~Rg~i~~~~~~~~l~~~l~-----~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~ 80 (418)
T Consensus 3 ~~~~~l~i~r~~~~~~~~~~~l~~~l~~~~~~~~~l~vy~GfDPTa~sLHlGhlv~l~~L~~fq~~Gh~~i~liGg~T~~ 82 (405)
T PRK13354 3 NIEEQLEIIRGGVAQIIDEEELREKLEKSIKTGKPLTLKLGLDPTAPDIHIGHLVVLRKLKQFQDAGHRAVILIGDFTGK 82 (405)
T ss_pred CHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 68999999952267718999999999863124884389995469988520764999999999998699479996786542
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44889886210246889999999999999887653267776402330167523431346888752234478753478888
Q gi|254780949|r 81 IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160 (418)
Q Consensus 81 IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~ 160 (418)
T Consensus 83 IGDPSgk~~~R~~l~~e~i~~N~~~~~~q~~~~ld~~----~~~iv~N~~W~~~~~~~dfl-~~g~~~~v~~mL~rd~v~ 157 (405)
T PRK13354 83 IGDPTGKSKERKLLTDEQVQHNADTYTEQIFKLLDKE----KTEMVNNSDWLSKLNFIDVI-DLGKKFTVARMLERDDFK 157 (405)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC----CCEEEEHHHHHCCCCHHHHH-HHHHHCCHHHHHHHHHHH
T ss_conf 5699998545667679999999999999999863665----51786568766474456899-986127299988478999
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCH-HHHH
Q ss_conf 740356883157889898989999999854297020154125889988899997316797179831102368710-2235
Q gi|254780949|r 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239 (418)
Q Consensus 161 ~Rl~~~~~is~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~-KmgK 239 (418)
T Consensus 158 ~Rl~~~~~is~~EF~Y~llQayD~~~L----~~~iqiGGsDQ~gNi~~G~dL~r~~~~~~~~~lT~PLL~~~dG~~KmgK 233 (405)
T PRK13354 158 KRLESDQGISFHEFFYPLLQAYDSVHL----DADIELGGTDQWFNILMGRDLQRKLGEEKQVGITMPLLEGLDGTEKMSK 233 (405)
T ss_pred HHHHCCCCCEEEEHHHHHHHHHHHHHH----CCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCCCCC
T ss_conf 998479993685146788888649986----8837995086888999799999985789835996061578877553250
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 4310123334579979999988620788898799750688856755543332--10220268898999999730000046
Q gi|254780949|r 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAE 317 (418)
Q Consensus 240 S~~naIwLd~~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~~--~~~pr~aKk~LA~EiT~lvHGe~~a~ 317 (418)
T Consensus 234 S~gnaIwLd~---sp~~~yq~~~n~~D~~v~~yl~l~T~l~~eeI~~l~~~~~~~~~~r~aKk~LA~Eit~lvHG~e~a~ 310 (405)
T PRK13354 234 SLGNYIGLDE---SPNEFYQKWMSIPDRDIVKYLELATDLHPEEIDEIAAQLETGKNPRDAKMILAEEITRFYHGEEALL 310 (405)
T ss_pred CCCCCEECCC---CHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 1278631479---8899999997265588999999966699999999999852266610599999999999836999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEECCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECHHHHC
Q ss_conf 79998643102576422577103077782169988999998499788689999987698798879804800023777714
Q gi|254780949|r 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397 (418)
Q Consensus 318 ~A~~~s~~lF~~~~~~~~lp~~~i~~~~i~~~~~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~~~d~~ 397 (418)
T Consensus 311 ~A~~~~~~lF~~~~l~e~ip~~~~~~~~-~~~~~l~dlLv~~gl~~SksEARRlI~qGgV~INgekV~D~~~~l~~~--- 386 (405)
T PRK13354 311 AAEEIFKALFQAGEIPQEIPEIPTIQSS-KETKNIVDLLVDLGLAPSKREARRLINNGAVKINGEKVTDVGTDVTVE--- 386 (405)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCCCCCC---
T ss_conf 9999999996789980008754100012-578889999998398678899999998599898999932887644689---
Q ss_pred CCCEEEEEECCEEEEEEEE
Q ss_conf 7976999777854899997
Q gi|254780949|r 398 STGNIKLSFGKKNHIICHL 416 (418)
Q Consensus 398 ~~~~liLr~GKK~~~lI~i 416 (418)
T Consensus 387 --~~llLr~GKK~~~~Ikl 403 (405)
T PRK13354 387 --NSLIIQVGKKKFVKIKL 403 (405)
T ss_pred --CCEEEEECCCEEEEEEE
T ss_conf --94899826812899995