HHsearch alignment for GI: 254780949 and conserved domain: PTZ00118
>PTZ00118 40S ribosomal protein S4; Provisional.
Probab=95.07 E-value=0.069 Score=32.74 Aligned_cols=70 Identities=11% Similarity=0.129 Sum_probs=50.4
Q ss_pred CCCCCHHHHHHH-CCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECHHHHC-----CCCEEEEEECCEEEEEEEE
Q ss_conf 169988999998-499788689999987698798879804800023777714-----7976999777854899997
Q gi|254780949|r 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD-----STGNIKLSFGKKNHIICHL 416 (418)
Q Consensus 347 ~~~~~l~dlL~~-~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~~~d~~-----~~~~liLr~GKK~~~lI~i 416 (418)
T Consensus 39 ~eslPL~iiLRd~LkyA~t~rEak~Il~~~~V~VDGkvr~D~~~PvG~MDVIsI~kt~e~yRvl~d~kGrf~l~~I 114 (262)
T PTZ00118 39 RECLPLVILLRNRLKYALTYDEVKLIVIQKIVKVDGKVRTDCTYPVGFMDVVSLTKTNEYFRLLYDTKGRFVPHKI 114 (262)
T ss_pred CCCCCCHHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEC
T ss_conf 4455433564346452265899999986790888999953489987467899985689659999868970999988