HHsearch alignment for GI: 254780949 and conserved domain: pfam00133
>pfam00133 tRNA-synt_1 tRNA synthetases class I (I, L, M and V). Other tRNA synthetase sub-families are too dissimilar to be included.
Probab=97.00 E-value=0.00061 Score=46.27 Aligned_cols=67 Identities=19% Similarity=0.298 Sum_probs=41.0
Q ss_pred CCCCCCCHHHHHHHHH----HHHHHHCCCEEEEEEE-CHHHC---------CCCCCCCCCCCCCCCHH--------HHHH
Q ss_conf 7876202434899999----9999985984999982-60111---------44889886210246889--------9999
Q gi|254780949|r 44 LTASSLHAGHLTQLML----LFWLQKTGHKPISLMG-GGTSI---------IGDPSFRDESRRMMRSQ--------EIQE 101 (418)
Q Consensus 44 pT~~slH~G~l~~~~~----l~~~q~~Gh~~i~liG-~~T~~---------IGDPsgk~~~R~~l~~~--------~i~~ 101 (418)
T Consensus 34 ~nG~-lH~GH~~~~t~~D~~aRy~rm~G~~Vl~p~GwD~~GlPiE~~vek~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 110 (606)
T pfam00133 34 ATGL-LHIGHALNKTLKDIVIRYKRMQGFDVLWVPGWDHHGLPTEQKVEKKLGIKGKK--DRHKLGREKFREKCREWKME 110 (606)
T ss_pred CCCC-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CHHHCCHHHHHHHHHHHHHH
T ss_conf 7885-02426687899999999998289977998845614399999999974211599--83657999999999999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999998876
Q gi|254780949|r 102 NIEKIKGIFSSF 113 (418)
Q Consensus 102 n~~~~~~q~~~~ 113 (418)
T Consensus 111 ~~~~~~~~~~~l 122 (606)
T pfam00133 111 YADEIRSQFKRL 122 (606)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999982