HHsearch alignment for GI: 254780949 and conserved domain: pfam00579
>pfam00579 tRNA-synt_1b tRNA synthetases class I (W and Y).
Probab=100.00 E-value=0 Score=524.28 Aligned_cols=284 Identities=38% Similarity=0.577 Sum_probs=266.0
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 14981899984378762024348999999999985984999982601114488988621024688999999999999988
Q gi|254780949|r 32 SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111 (418)
Q Consensus 32 ~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~ 111 (418)
T Consensus 2 ~~k~~~vy~G~~PTg~-lHlGhl~~~~~~~~lq~~g~~~~~liad~~a~~~d~~-~~~~~~~~~~~~~~~n~---~~~ia 76 (291)
T pfam00579 2 KERPLRVYTGFDPTGP-LHLGYLVPLMKLVQFQQAGHEVFFLIGDLTAIIGDPS-KSEERKLLSREEVLENA---KAQLA 76 (291)
T ss_pred CCCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCC-CCCHHHHHHHHHHHHHH---HHHHH
T ss_conf 9998189973488963-0779899999999999789909999738331334989-63577751489999999---99998
Q ss_pred HHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 76532677764023301675234313468887522344787534788887403568831578898989899999998542
Q gi|254780949|r 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191 (418)
Q Consensus 112 ~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is~~EF~Y~llQayD~~~L~~~~ 191 (418)
T Consensus 77 ~g~d----~~k~~i~~~s~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~r~~~~~~~~~~~~~YP~lQa~D~~~l~~~- 151 (291)
T pfam00579 77 CGLD----PEKSEIVNNSDWLEHLELAWLLRDLGNHFSLNRMLQFKDVKKRLKQNPGISLGEFTYPLLQAADILLLKAD- 151 (291)
T ss_pred CCCC----CCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHCCCHHCCCC-
T ss_conf 4778----22159997501562003999999873424476664048798764257887665501521763230001467-
Q ss_pred CCCEECCCCHHHHHHHHHHHHHHHCCCC---CEEEEEECEEECCCCH-HHHHHHHC-CCCCCCCCCCHHHHHHHHHHHCH
Q ss_conf 9702015412588998889999731679---7179831102368710-22354310-12333457997999998862078
Q gi|254780949|r 192 DCRLQMGGSDQWGNIICGIDLGERLKTP---KLFALTSPLLTTASGT-KMGKTLSG-AIWLNKEMTSPYNFWQYWRNIDD 266 (418)
Q Consensus 192 ~~~iqiGGsDQwgNi~~G~eLir~~~~~---~~~glT~PLLt~~dG~-KmgKS~~n-aIwLd~~~tSPy~fyQf~~n~~D 266 (418)
T Consensus 152 ---i~~gG~DQ~~~~~l~rdl~~k~~~~~~~~p~~l~~~ll~~~~G~~KMSKS~~nsaI~L~d~~~~i~~ki~~a~~~~~ 228 (291)
T pfam00579 152 ---LQPGGSDQWGHIELGRDLARRFNKKVFKKPVGLTNPLLTGLDGGKKMSKSAGNSAIFLDDEKESVYKKIQKAYTDPD 228 (291)
T ss_pred ---CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCH
T ss_conf ---56656004899999999999957856788348741662266787663678999726667986789999851027873
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
Q ss_conf 88987997506888567555433321-022026889899999973000004679998643102
Q gi|254780949|r 267 ADVVSFAKRLTTLPMSEIDRMAKLQG-KEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328 (418)
Q Consensus 267 ~dV~kyLklfT~l~l~EI~~l~~~~~-~~pr~aKk~LA~EiT~lvHGe~~a~~A~~~s~~lF~ 328 (418)
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~vh~~d~K~~~~e~~~~~le 291 (291)
T pfam00579 229 REVRKDLKLFTELSNEEIEILEAFLGKGPKREAEELLAREVTGLVHGGDLKKAAAEAVNALLE 291 (291)
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 457887754588999999999986589998999999999998381879999999999999849