HHsearch alignment for GI: 254780949 and conserved domain: pfam00579

>pfam00579 tRNA-synt_1b tRNA synthetases class I (W and Y).
Probab=100.00  E-value=0  Score=524.28  Aligned_cols=284  Identities=38%  Similarity=0.577  Sum_probs=266.0

Q ss_pred             HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             14981899984378762024348999999999985984999982601114488988621024688999999999999988
Q gi|254780949|r   32 SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS  111 (418)
Q Consensus        32 ~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~  111 (418)
T Consensus         2 ~~k~~~vy~G~~PTg~-lHlGhl~~~~~~~~lq~~g~~~~~liad~~a~~~d~~-~~~~~~~~~~~~~~~n~---~~~ia   76 (291)
T pfam00579         2 KERPLRVYTGFDPTGP-LHLGYLVPLMKLVQFQQAGHEVFFLIGDLTAIIGDPS-KSEERKLLSREEVLENA---KAQLA   76 (291)
T ss_pred             CCCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCC-CCCHHHHHHHHHHHHHH---HHHHH
T ss_conf             9998189973488963-0779899999999999789909999738331334989-63577751489999999---99998


Q ss_pred             HHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             76532677764023301675234313468887522344787534788887403568831578898989899999998542
Q gi|254780949|r  112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY  191 (418)
Q Consensus       112 ~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is~~EF~Y~llQayD~~~L~~~~  191 (418)
T Consensus        77 ~g~d----~~k~~i~~~s~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~r~~~~~~~~~~~~~YP~lQa~D~~~l~~~-  151 (291)
T pfam00579        77 CGLD----PEKSEIVNNSDWLEHLELAWLLRDLGNHFSLNRMLQFKDVKKRLKQNPGISLGEFTYPLLQAADILLLKAD-  151 (291)
T ss_pred             CCCC----CCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHCCCHHCCCC-
T ss_conf             4778----22159997501562003999999873424476664048798764257887665501521763230001467-


Q ss_pred             CCCEECCCCHHHHHHHHHHHHHHHCCCC---CEEEEEECEEECCCCH-HHHHHHHC-CCCCCCCCCCHHHHHHHHHHHCH
Q ss_conf             9702015412588998889999731679---7179831102368710-22354310-12333457997999998862078
Q gi|254780949|r  192 DCRLQMGGSDQWGNIICGIDLGERLKTP---KLFALTSPLLTTASGT-KMGKTLSG-AIWLNKEMTSPYNFWQYWRNIDD  266 (418)
Q Consensus       192 ~~~iqiGGsDQwgNi~~G~eLir~~~~~---~~~glT~PLLt~~dG~-KmgKS~~n-aIwLd~~~tSPy~fyQf~~n~~D  266 (418)
T Consensus       152 ---i~~gG~DQ~~~~~l~rdl~~k~~~~~~~~p~~l~~~ll~~~~G~~KMSKS~~nsaI~L~d~~~~i~~ki~~a~~~~~  228 (291)
T pfam00579       152 ---LQPGGSDQWGHIELGRDLARRFNKKVFKKPVGLTNPLLTGLDGGKKMSKSAGNSAIFLDDEKESVYKKIQKAYTDPD  228 (291)
T ss_pred             ---CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCH
T ss_conf             ---56656004899999999999957856788348741662266787663678999726667986789999851027873


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
Q ss_conf             88987997506888567555433321-022026889899999973000004679998643102
Q gi|254780949|r  267 ADVVSFAKRLTTLPMSEIDRMAKLQG-KEINEAKKIIATEITTMVHGREEAEKAATAAMECFD  328 (418)
Q Consensus       267 ~dV~kyLklfT~l~l~EI~~l~~~~~-~~pr~aKk~LA~EiT~lvHGe~~a~~A~~~s~~lF~  328 (418)
T Consensus       229 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~vh~~d~K~~~~e~~~~~le  291 (291)
T pfam00579       229 REVRKDLKLFTELSNEEIEILEAFLGKGPKREAEELLAREVTGLVHGGDLKKAAAEAVNALLE  291 (291)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf             457887754588999999999986589998999999999998381879999999999999849