HHsearch results for GI: 254780949 and protein with PDBid: 1h3f_A
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYB; 2.0A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A*
Probab=100.00 E-value=0 Score=790.86 Aligned_cols=388 Identities=25% Similarity=0.364 Sum_probs=354.8
Q ss_pred HHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCC
Q ss_conf 99968920022998999998514981899984378762024348999999999985984999982601114488988621
Q gi|254780949|r 11 ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90 (418)
Q Consensus 11 ~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~ 90 (418)
.|.+||+++.+++++.++.+.+++++++|+||||||+||||||+++++.|++||++||+|+++|||+||+|||||||+.+
T Consensus 13 ~Li~Rg~~~i~~~eel~~~l~~~~~~~~Y~G~dPTg~sLHlGhlv~~~~l~~lq~~G~~~~~li~d~ta~igDp~g~~~~ 92 (432)
T 1h3f_A 13 ALLKRGAEEIVPEEELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTGMIGDPSGRSKT 92 (432)
T ss_dssp HHHHTTCSEEETHHHHHHHHHTCSCCEEEEEECTTCCSCBHHHHHHHHHHHHHHHTTCEEEEEECCCC------------
T ss_pred HHHHCCCCEECCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCHH
T ss_conf 99872870025989999999649998899846789975309989999999999988994999983622794689861121
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 02468899999999999998876532677764023301675234313468887522344787534788887403568831
Q gi|254780949|r 91 RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170 (418)
Q Consensus 91 R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is 170 (418)
|+.++.+++.+|++.+..|+..++++. +....+++|++|+..+++++||+ +|++|+|++|++|+++++|++++.++|
T Consensus 93 r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~l~-~~~~~~v~~~~~~~~~~~r~~~~~~~~ 169 (432)
T 1h3f_A 93 RPPLTLEETRENAKTYVAQAGKILRQE--PHLFELRYNSEWLEGLTFKEVVR-LTSLMTVAQMLEREDFKKRYEAGIPIS 169 (432)
T ss_dssp ---------HHHHHHHHHHHTTTSCCC--TTTEEEEETHHHHTTCBHHHHHH-HHTTSBHHHHTTSHHHHHHHHTTCCCB
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHCCHHHHHH-HCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 110549999999999999886542013--32111103388873234999986-444010031010378987763146654
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCC-HHHHHHHHCCCCCCC
Q ss_conf 5788989898999999985429702015412588998889999731679717983110236871-022354310123334
Q gi|254780949|r 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249 (418)
Q Consensus 171 ~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG-~KmgKS~~naIwLd~ 249 (418)
++||+||+||||||++| +|++|+||+||||||++|||+++|++..+++++|+|+|++++| +|||||++|||||+
T Consensus 170 ~~ef~YpllQa~D~~~l----~~~~~~gG~DQ~~~i~~~rd~~~r~~~~~~~~~~~p~l~~~~g~~KmskS~~~~i~l~- 244 (432)
T 1h3f_A 170 LHELLYPFAQAYDSVAI----RADVEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGREKMSKSLDNYIGLT- 244 (432)
T ss_dssp GGGGTHHHHHHHHHHHH----TCSEEEEEGGGHHHHHHHHHHHHHTTCCCCEEEEECCCBCTTSSSBCCGGGTCCCBTT-
T ss_pred CCCCCCHHHHHHHHHHH----CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf 32124425666567776----0677667373799999888988861887736997375403787676668999971326-
Q ss_pred CCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHH---------
Q ss_conf 57997999998862078889879975068885675554333210220268898999999730000046799---------
Q gi|254780949|r 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA--------- 320 (418)
Q Consensus 250 ~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~~~~~pr~aKk~LA~EiT~lvHGe~~a~~A~--------- 320 (418)
+|||+|||||||+||++|++||++||++|++||+++++ ++++.+|++||.++|+++||.+.+..++
T Consensus 245 --~~p~~~~~~~~~~~D~dv~kyLklfT~l~~eEIe~l~~---~~~~~~qk~LA~evt~~~h~~~~~~~~~~~~~~~~~~ 319 (432)
T 1h3f_A 245 --EPPEAMFKKLMRVPDPLLPSYFRLLTDLEEEEIEALLK---AGPVPAHRVLARLLTAAYALPQIPPRIDRAFYESLGY 319 (432)
T ss_dssp --SCHHHHHHHHHTSCGGGHHHHHHHHCCCCHHHHHHHHH---HCHHHHHHHHHHHHHHHHHSSSCCSCCSHHHHHHTTC
T ss_pred --CCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --78388999998188588999998602256999999986---3700699999999999986444368999999998756
Q ss_pred --------------------HHHHHHCCCCCCCCCCCCEECCHHHHCCC-CCHHHHHHHCCCCCCHHHHHHHHHCCCEEE
Q ss_conf --------------------98643102576422577103077782169-988999998499788689999987698798
Q gi|254780949|r 321 --------------------TAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKI 379 (418)
Q Consensus 321 --------------------~~s~~lF~~~~~~~~lp~~~i~~~~i~~~-~~l~dlL~~~gL~~SksEARRlI~qGgV~I 379 (418)
..+...| .+..++++|++.++..++..+ .+|.|+|+++|+|+|||||||||+||||||
T Consensus 320 ~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~lp~~~i~~~~l~~~~~~l~dll~~~gl~~SksEaRRlI~~ggv~I 398 (432)
T 1h3f_A 320 AWEAFGRDKEAGPEEVRRAEARYDEVA-KGGIPEEIPEVTIPASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRL 398 (432)
T ss_dssp CGGGTTCCTTCSCHHHHHHHHHHHHHC-C----CCSCEEEECGGGCBTTEEEHHHHHHHTTSSSSHHHHHHHHHTTCEEE
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCEEECHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEE
T ss_conf 677505533221689999998877763-0588323883562388831586409999998599777899999998399898
Q ss_pred CCEEECCCCCEECHHHHCCCCEEEEEECCEEEEEEEEC
Q ss_conf 87980480002377771479769997778548999971
Q gi|254780949|r 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417 (418)
Q Consensus 380 N~~kI~d~~~~i~~~d~~~~~~liLr~GKK~~~lI~iv 417 (418)
|+++|+|+++.++. +++++||+|||+|++|+|.
T Consensus 399 N~~ki~d~~~~i~~-----~~~~ilr~GKk~~~~i~v~ 431 (432)
T 1h3f_A 399 DGEVLTDPMLQVDL-----SRPRILQRGKDRFVRVRLS 431 (432)
T ss_dssp TTEECCCTTCEEEC-----SSCEEEEETTTEEEEEEEC
T ss_pred CCEEECCCCEEECC-----CCCEEEEECCCCEEEEEEC
T ss_conf 99994387704258-----9838998558528999965