HHsearch results for GI: 254780949 and protein with PDBid: 1n3l_A
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognition domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A*
Probab=100.00 E-value=0 Score=377.01 Aligned_cols=284 Identities=15% Similarity=0.143 Sum_probs=228.6
Q ss_pred HHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCC
Q ss_conf 99968920022998999998514981899984378762024348999999999985984999982601114488988621
Q gi|254780949|r 11 ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90 (418)
Q Consensus 11 ~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~ 90 (418)
+|.+||+. ++..+++|+++++++++++|+||||||+ +||||+++++++++||++||+++++|||+||+||||++....
T Consensus 12 ~Li~r~~~-e~~~~~~L~~~L~~k~~~vy~G~~PTg~-lHLG~~v~~~~l~~~~~~g~~~~ilIaD~~a~i~d~~~~~~~ 89 (372)
T 1n3l_A 12 HLITRNLQ-EVLGEEKLKEILKERELKIYWGTATTGK-PHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWEL 89 (372)
T ss_dssp HHHHTTCS-EEECHHHHHHHHTTSCCEEEEEECCSSC-CBGGGHHHHHHHHHHHHTTCEEEEEECHHHHHHTTTTSCHHH
T ss_pred HHHHCCCC-EECCHHHHHHHHHCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHH
T ss_conf 99974972-4369999999982699989992688963-389999999999999988996899980511002799994899
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 0246889999999999999887653-267776402330167523431346888752234478753478888740356883
Q gi|254780949|r 91 RRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169 (418)
Q Consensus 91 R~~l~~~~i~~n~~~~~~q~~~~~~-~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~i 169 (418)
+. .....+...+...+. .+-...++.+++|++|.....++..+..+++++++++ .+.+++.|...+.++
T Consensus 90 ~~--------~~~~~~~~~~~a~~~a~g~d~~k~~i~~~S~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 159 (372)
T 1n3l_A 90 LE--------LRVSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHD--SKKAGAEVVKQVEHP 159 (372)
T ss_dssp HH--------HHHHHHHHHHHHHHHHHTCCCTTEEEEEGGGTTTSHHHHHHHHHHHTTSCHHH--HHHHTTTTSCCCSSC
T ss_pred HH--------HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCCCCC
T ss_conf 99--------99999999999988872588888410124387664678899877778999988--889999996247898
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCHHHHHH-HHCCCCCC
Q ss_conf 15788989898999999985429702015412588998889999731679717983110236871022354-31012333
Q gi|254780949|r 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIWLN 248 (418)
Q Consensus 170 s~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~KmgKS-~~naIwLd 248 (418)
|+.||+||+|||||++++ +|++|+||+|||+|++.|||+++|++..+.+++++|++++.+|.||||| .+|+|+|+
T Consensus 160 s~~~f~YP~LQaaDil~~----~a~iv~~G~DQ~~~i~l~rdla~k~~~~~~~~l~~pll~~l~G~k~s~s~~~s~I~l~ 235 (372)
T 1n3l_A 160 LLSGLLYPGLQALDEEYL----KVDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLL 235 (372)
T ss_dssp CHHHHHHHHHHHHHHHHT----TCSEEEEEGGGHHHHHHHHHHGGGGTCCCCEEEEECCCCCSSCC-------CCSCBTT
T ss_pred CHHHHHHHHHHHHHHHHC----CCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCCCEEECC
T ss_conf 635442017876566532----6777884247889999999999981899874882276553122201369988876523
Q ss_pred CCCCCHHHHHHHHH-------HHCHHHHHHHHHHHCCCCH-----------------HHHHHHHHH---HHCCCCHHHHH
Q ss_conf 45799799999886-------2078889879975068885-----------------675554333---21022026889
Q gi|254780949|r 249 KEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPM-----------------SEIDRMAKL---QGKEINEAKKI 301 (418)
Q Consensus 249 ~~~tSPy~fyQf~~-------n~~D~dV~kyLklfT~l~l-----------------~EI~~l~~~---~~~~pr~aKk~ 301 (418)
+||.+...+++ +++|..+..|.+.+++-.. +++++|++. ..-+|.++|+.
T Consensus 236 ---D~~~~i~~KI~~a~td~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ele~~~~~g~l~~~dlK~~ 312 (372)
T 1n3l_A 236 ---DRKEDVKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNS 312 (372)
T ss_dssp ---CCHHHHHHHHHTCCCCTTCCSSCHHHHHHHHTTGGGTTCEEECCCGGGTCCEEESSHHHHHHHHHTTCSCHHHHHHH
T ss_pred ---CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
T ss_conf ---89999999999700898888878642210001122432133256666357777577999999996599898999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 899999973000
Q gi|254780949|r 302 IATEITTMVHGR 313 (418)
Q Consensus 302 LA~EiT~lvHGe 313 (418)
||+.|+++++.-
T Consensus 313 la~~i~~~l~pi 324 (372)
T 1n3l_A 313 VEVALNKLLDPI 324 (372)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999988999