HHsearch results for GI: 254780949 and protein with PDBid: 1r6u_A

Probab=100.00  E-value=2.8e-45  Score=316.93  Aligned_cols=307  Identities=14%  Similarity=0.131  Sum_probs=229.6

Q ss_pred             HHHCCCHHHCCCHHHH-HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCE-EEEEEECHHHCCCCCCCCCC
Q ss_conf             9968920022998999-998514981899984378762024348999999999985984-99998260111448898862
Q gi|254780949|r   12 LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK-PISLMGGGTSIIGDPSFRDE   89 (418)
Q Consensus        12 L~~Rg~i~~~~~~~~l-~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~-~i~liG~~T~~IGDPsgk~~   89 (418)
                      |..||++-.-.+.+.+ +.+-+++|+.+|+||+|||++|||||+++++++++||++||. +++++||.++...+      
T Consensus        84 ~~rRgi~f~hrD~d~il~~~~~gkpf~vytG~~PSg~~lHLGH~i~~~~~k~lQ~~g~~~v~I~iaD~ea~~~~------  157 (437)
T 1r6u_A           84 FLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWK------  157 (437)
T ss_dssp             HHHHTSEEEEESHHHHHHHHTTTCCEEEEEEECCCSSCCBHHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHS------
T ss_pred             HEECCEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCC------
T ss_conf             00155555327899999999759985899533789875309999999999999970698547886134865158------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             10246889999999999999887653267776402330167523431-34688875223447875347888874035688
Q gi|254780949|r   90 SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK-YIDLLREIGSFFSVNRMLSFESVRSRLKREQS  168 (418)
Q Consensus        90 ~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~-~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~  168 (418)
                         .++.+++.+|+..+..++-   .++-++.++.|++|++|+..+. +...+..++++.|+++|.++.      ..+.+
T Consensus       158 ---~~~~ee~~~~~~e~~~~~i---A~G~Dp~kt~i~~~s~~~~~~~~~~~~~~~l~k~~t~~~~k~~~------g~~~~  225 (437)
T 1r6u_A          158 ---DLTLDQAYGDAVENAKDII---ACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQVKGIF------GFTDS  225 (437)
T ss_dssp             ---SCCHHHHHHHHHHHHHHHH---TTTCCGGGEEEEEHHHHGGGCTTHHHHHHHHHHTCBHHHHHHHH------CCCTT
T ss_pred             ---CCCHHHHHHHHHHHHHHHH---HHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH------CCCCC
T ss_conf             ---9999999999999999999---80889531289978889988799999999997646511688875------46777


Q ss_pred             CCHHHHHHHHHHHHHHHHH-------HHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCH--HHHH
Q ss_conf             3157889898989999999-------854297020154125889988899997316797179831102368710--2235
Q gi|254780949|r  169 LSFLEFNYMILQAYDFVEL-------AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGK  239 (418)
Q Consensus       169 is~~EF~Y~llQayD~~~L-------~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~--KmgK  239 (418)
                      +++.+|+||+|||+|.+++       ++.+.|.++.||+|||+|+..+||+++|++.++...++.|++++.+|.  ||||
T Consensus       226 ~~~g~~~yP~lQaaDil~~~~d~i~~~~~~~~~lVPvG~DQ~~hi~ltRdia~r~~~~~p~~i~~~~lp~L~G~~~KMSs  305 (437)
T 1r6u_A          226 DCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSA  305 (437)
T ss_dssp             SBHHHHHHHHHHHGGGSGGGCHHHHTTCCCCEEEEEEEGGGHHHHHHHHHHGGGGTCCCCEEEEECCCEETTEEEEECCT
T ss_pred             CCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf             76543234488888899841605432667752462333568999999999999836788633214455567876676777


Q ss_pred             HH-HCCCCCCCCCCCHHHHHHHHH-------------------HHCHHHHHHHHHHHCCCCHHHHHHHHHHH-H--CCCC
Q ss_conf             43-101233345799799999886-------------------20788898799750688856755543332-1--0220
Q gi|254780949|r  240 TL-SGAIWLNKEMTSPYNFWQYWR-------------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQ-G--KEIN  296 (418)
Q Consensus       240 S~-~naIwLd~~~tSPy~fyQf~~-------------------n~~D~dV~kyLklfT~l~l~EI~~l~~~~-~--~~pr  296 (418)
                      |- +++|||+.   +|-+++.+++                   |.++..+..|++ |++.+.++++++.+.- +  -++.
T Consensus       306 S~~~saI~L~D---~p~~I~kKI~k~~~~~g~~t~ee~~~~ggn~~~~v~~~~l~-~f~~dd~~leei~~~y~~G~l~~g  381 (437)
T 1r6u_A          306 SDPNSSIFLTD---TAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLT-FFLEDDDKLEQIRKDYTSGAMLTG  381 (437)
T ss_dssp             TSSSSCCBTTC---CHHHHHHHHHHTSCCCBCSSHHHHHHHCBCTTTCHHHHHHH-HHCCCHHHHHHHHHHHHHTSSCST
T ss_pred             CCCCCCCCCCC---CHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCHHHHHHHHH-HHCCCHHHHHHHHHHHHCCCCCHH
T ss_conf             89866010579---99999986443515899874222442499953106999999-977998899999999875998999


Q ss_pred             HHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHCCCCCCCCCCCCEE
Q ss_conf             2688989999997300--0004679998643102576422577103
Q gi|254780949|r  297 EAKKIIATEITTMVHG--REEAEKAATAAMECFDMSIHSQHMPTIS  340 (418)
Q Consensus       297 ~aKk~LA~EiT~lvHG--e~~a~~A~~~s~~lF~~~~~~~~lp~~~  340 (418)
                      ++|+.||++++++++.  +.-++.+.+..+..+.....+.+++.+.
T Consensus       382 e~Kk~Lae~l~~~l~~~qekr~~~~de~v~~~~~~~kl~~~~~~~~  427 (437)
T 1r6u_A          382 ELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLSFDFQKLA  427 (437)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHTSCCCCSCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf             9999999999999899999999998889999848465677699999