HHsearch results for GI: 254780949 and protein with PDBid: 1rqg_A

>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1

Probab=93.59  E-value=0.067  Score=31.40  Aligned_cols=67  Identities=22%  Similarity=0.315  Sum_probs=40.1

Q ss_pred             CCCCCCCHHHHH-HHHH----HHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHH
Q ss_conf             787620243489-9999----999998598499998260111448898862102468-899999999999998876
Q gi|254780949|r   44 LTASSLHAGHLT-QLML----LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENIEKIKGIFSSF  113 (418)
Q Consensus        44 pT~~slH~G~l~-~~~~----l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~-~~~i~~n~~~~~~q~~~~  113 (418)
                      |+|+ ||+||+. +.+.    -|..+..|++++.+-|-=+-  |=|.-+.++..-.+ .+-+..+.+.+++|+.++
T Consensus        13 ~NG~-lHiGH~~~~~l~aDi~~Ry~rm~G~~v~~~~GtDeH--G~~i~~~a~~~g~~p~e~~d~~~~~~~~~~~~l   85 (722)
T 1rqg_A           13 ANGP-IHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEH--GTPISFRALKEGRSPREIVDEFHEQIKITFQRA   85 (722)
T ss_dssp             TTSC-CBHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEEBCC--SHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECEECCC--HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             8988-566743337899999999998079955863866620--799999999829999999999999999999983