HHsearch results for GI: 254780949 and protein with PDBid: 2g36_A

>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: TRP; 2.50A {Thermotoga maritima}
Probab=100.00  E-value=1.7e-40  Score=286.01  Aligned_cols=258  Identities=17%  Similarity=0.189  Sum_probs=208.6

Q ss_pred             CCEEEEEEECCCCCCCCHHHHHH-HHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             98189998437876202434899-99999999859849999826011144889886210246889999999999999887
Q gi|254780949|r   34 GVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS  112 (418)
Q Consensus        34 ~~~~~y~G~DpT~~slH~G~l~~-~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~~  112 (418)
                      ..+++|.||+|||+ +||||+++ +..+++||++||+++++|||+||++|||++.++.|         .+.   ++.+..
T Consensus        11 ~~~ri~tG~~PTG~-lHlG~~i~~i~~~~~lq~~g~~~~~~iaD~ha~~~~~~~~~~~~---------~~~---~~~~~~   77 (340)
T 2g36_A           11 HHMRILSGMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLK---------EYT---RDLVRG   77 (340)
T ss_dssp             -CCEEEEEECCCSS-CBHHHHHTHHHHHHHHHHTTCEEEEEECHHHHHHHHTTCCTTHH---------HHH---HHHHHH
T ss_pred             CCCEEEECCCCCCC-CHHHHHHHHHHHHHHHHHCCCEEEEEECCHHEECCCCCCHHHHH---------HHH---HHHHHH
T ss_conf             44536656188971-45887899999999999769949999723010148999999999---------999---999999


Q ss_pred             HHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             65326777640233016752343134688875223447875347888874035688315788989898999999985429
Q gi|254780949|r  113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD  192 (418)
Q Consensus       113 ~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is~~EF~Y~llQayD~~~L~~~~~  192 (418)
                      ++..+-.+....+..+++|.....+..++..+....++++|.....++.|.......+..+|+||+|||+|++++    +
T Consensus        78 ~~a~g~~p~k~~i~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~YP~lqaaDil~~----~  153 (340)
T 2g36_A           78 FLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIY----K  153 (340)
T ss_dssp             HHHTTCCTTTSEEEEGGGCTHHHHHHHHHHTTSCHHHHHTCHHHHTC-------CCCSHHHHTHHHHHHHHHHTT----T
T ss_pred             HHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHC----C
T ss_conf             998268987349997013667788999998520157777534542100001457776534344755531023422----5


Q ss_pred             CCEECCCCHHHHHHHHHHHHHHHCCC--------CCEEEEEECEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             70201541258899888999973167--------9717983110236871022354310123334579979999988620
Q gi|254780949|r  193 CRLQMGGSDQWGNIICGIDLGERLKT--------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI  264 (418)
Q Consensus       193 ~~iqiGGsDQwgNi~~G~eLir~~~~--------~~~~glT~PLLt~~dG~KmgKS~~naIwLd~~~tSPy~fyQf~~n~  264 (418)
                      +++..+|.||+.++..+||+.++.+.        .+++..+.|+|++++|.|||||.+|+|||+   +||-+...+.++.
T Consensus       154 ~~~v~~G~DQ~~~~~l~R~ia~k~n~~~~~~~~~p~~~~~~~~~l~~~~g~KmSkS~~~~I~l~---D~~~~i~kKI~ka  230 (340)
T 2g36_A          154 AEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLE---ISEKELEQTILRM  230 (340)
T ss_dssp             CSEEEECGGGHHHHHHHHHHHHHHHHHSCCCCCCCEEEECCSCCCCCTTSSCCCGGGTCCCBTT---CCHHHHHHHHHTC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC---CCHHHHHHHHHEE
T ss_conf             7777663778999999999999876520334678631012356789999997888745555202---7657887765510


Q ss_pred             ---------------CHHHHHHHHHHHCCCCHHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             ---------------78889879975068885675554333---2102202688989999997300
Q gi|254780949|r  265 ---------------DDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEITTMVHG  312 (418)
Q Consensus       265 ---------------~D~dV~kyLklfT~l~l~EI~~l~~~---~~~~pr~aKk~LA~EiT~lvHG  312 (418)
                                     ....+..|+.+| ..+.++++++...   .+-++.++|+.||+.+++.+.-
T Consensus       231 ~td~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~dlK~~lae~li~~L~p  295 (340)
T 2g36_A          231 MTDPARVRRSDPGNPENCPVWKYHQAF-DISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAP  295 (340)
T ss_dssp             CCCTTCSSTTSCCCGGGCHHHHHHHHT-TCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHC-CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             469723404688875200599999860-87377899999865417978899999999999999789