HHsearch results for GI: 254780949 and protein with PDBid: 2ip1_A
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A*
Probab=100.00 E-value=5.3e-42 Score=295.88 Aligned_cols=297 Identities=13% Similarity=0.142 Sum_probs=231.4
Q ss_pred HHHCCCHHHCCCHHH-HHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCE-EEEEEECHHHCCCCCCCCCC
Q ss_conf 996892002299899-9998514981899984378762024348999999999985984-99998260111448898862
Q gi|254780949|r 12 LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK-PISLMGGGTSIIGDPSFRDE 89 (418)
Q Consensus 12 L~~Rg~i~~~~~~~~-l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~-~i~liG~~T~~IGDPsgk~~ 89 (418)
+..||++-.--+-+. |+.+-+++++.+|+||+|||++|||||+++++++++||++||. ++++++|..+. .
T Consensus 78 ~~rRgi~f~hrd~d~il~~~~~g~~f~iytG~~PSg~~lHLGh~l~~~~~k~~Q~~~~~~v~i~iaD~~a~--------~ 149 (432)
T 2ip1_A 78 FLRKGLFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVIELTDDEKF--------L 149 (432)
T ss_dssp HHHTTSEEEEESHHHHHHHHHHTCCCEEEEEECCCSSCCBGGGHHHHHHHHHHHHHHTCCEEEEECHHHHH--------H
T ss_pred HHCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH--------C
T ss_conf 10255655236799999999749985999472799962149999999999999976798505897234763--------6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 10246889999999999999887653267776402330167523431346888752234478753478888740356883
Q gi|254780949|r 90 SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169 (418)
Q Consensus 90 ~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~i 169 (418)
.|+.++.+++.+|+..+..++-.+ +-++.+..|+.|++|...+.+..+++ ++++.|+++|.++..+. ..+
T Consensus 150 ~~~~~s~e~i~~~~~e~~~~ilA~---G~Dp~kt~i~~~s~~~~~~~~~~~~~-l~k~~t~~~~~~~~~~~------~~~ 219 (432)
T 2ip1_A 150 FKHKLTINDVKNFARENAKDIIAV---GFDPKNTFIFSDLQYMGGAFYETVVR-VSRQITGSTAKAVFGFN------DSD 219 (432)
T ss_dssp HCTTCCHHHHHHHHHHHHHHHHTT---TCCGGGEEEEEHHHHCSHHHHHHHHH-HHTSCCHHHHHHTTCCC------TTS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH---CCCCCCEEEEEECHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHC------CCC
T ss_conf 477899999999999999999980---85934359997016665779999997-51544235788877513------555
Q ss_pred CHHHHHHHHHHHHHHHHHH-------HHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCC--HHHHHH
Q ss_conf 1578898989899999998-------5429702015412588998889999731679717983110236871--022354
Q gi|254780949|r 170 SFLEFNYMILQAYDFVELA-------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKT 240 (418)
Q Consensus 170 s~~EF~Y~llQayD~~~L~-------~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG--~KmgKS 240 (418)
++..|.||+|||+|+++.. ....++++.||.|||.|+..+||+++|++..+...+++|++.+.+| .|||||
T Consensus 220 n~g~~~yP~lQaAdil~~~~~~~~~~~~~~~~lvPvG~DQ~~hi~ltRdia~r~~~~~p~~i~~~~l~~L~g~~~KMSkS 299 (432)
T 2ip1_A 220 CIGKFHFASIQIATAFPSSFPNVLGLPDKTPCLIPCAIDQDPYFRVCRDVADKLKYSKPALLHSRFFPALQGSTTKMSAS 299 (432)
T ss_dssp CHHHHHTHHHHHHTTSGGGCTTTTCCCTTCCEEEEEEGGGHHHHHHHHHHHHHHTSCCCEEEEECCCCCTTC--------
T ss_pred CCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 42224672576767774010444054445687665245478999999999985246887321465533567632345567
Q ss_pred HH-CCCCCCCCCCCHHHHHHHHHHH-------------------CHHHHHHHHHHHCCCCHHHHHHHHHHH---HCCCCH
Q ss_conf 31-0123334579979999988620-------------------788898799750688856755543332---102202
Q gi|254780949|r 241 LS-GAIWLNKEMTSPYNFWQYWRNI-------------------DDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINE 297 (418)
Q Consensus 241 ~~-naIwLd~~~tSPy~fyQf~~n~-------------------~D~dV~kyLklfT~l~l~EI~~l~~~~---~~~pr~ 297 (418)
.. ++|||+ ++|-+.+.+.++. +...+..||+.|+. +-++++++.+.- +-.+.+
T Consensus 300 ~~~s~I~L~---D~pe~I~kKI~ka~td~g~~t~ee~~~~gg~p~~~~v~~~l~~f~~-dd~~leei~~~y~~G~l~~gd 375 (432)
T 2ip1_A 300 DDTTAIFMT---DTPKQIQKKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLSFFKD-DDVFLKECYDKYKSGELLSGE 375 (432)
T ss_dssp CGGGCCBTT---CCHHHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHHHHHHHCC-CHHHHHHHHHHHHHTSSCHHH
T ss_pred CCCCEEECC---CCHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCHHH
T ss_conf 765478736---8999999874547727998744440005898305189999998669-868999999998559989899
Q ss_pred HHHHHHHHHHHHH--HHHCHHHHHHHHHHHHCCCC
Q ss_conf 6889899999973--00000467999864310257
Q gi|254780949|r 298 AKKIIATEITTMV--HGREEAEKAATAAMECFDMS 330 (418)
Q Consensus 298 aKk~LA~EiT~lv--HGe~~a~~A~~~s~~lF~~~ 330 (418)
+|+.||+.+++++ |.+.-++......+..+...
T Consensus 376 lKk~lae~l~~~l~~~rerr~~~~d~~~~~~~~~~ 410 (432)
T 2ip1_A 376 MKKLCIETLQEFVKAFQERRAQVDEETLDKFMVPH 410 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999989999999998887799872735