HHsearch results for GI: 254780949 and protein with PDBid: 2jan_A
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=1059.38 Aligned_cols=413 Identities=35% Similarity=0.601 Sum_probs=389.1
Q ss_pred HHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCC
Q ss_conf 36799999996892002299899999851498189998437876202434899999999998598499998260111448
Q gi|254780949|r 4 FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83 (418)
Q Consensus 4 ~~~~~~~~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGD 83 (418)
|..|++++|.+||+|+++|++++|+++++++++++|+||||||||||+||+||+|+||+||++||+||+||||+||+|||
T Consensus 1 m~~~~l~eL~~Rg~i~~~t~~~~l~~~~~~~~~~~y~G~DPTa~sLHlGh~v~l~~l~~fq~~Gh~~v~liG~~Ta~IGD 80 (432)
T 2jan_A 1 MSGMILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGD 80 (432)
T ss_dssp ----CHHHHHHHTCCSEESCHHHHHHHHHHSCCEEEEEECCSSSSCBGGGHHHHHHHHHHHHTTCEEEEEECHHHHHHHC
T ss_pred CCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCC
T ss_conf 97689999998799444189999999984699679980688997630877999999999998799799997654010579
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89886210246889999999999999887653267776402330167523431346888752234478753478888740
Q gi|254780949|r 84 PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163 (418)
Q Consensus 84 Psgk~~~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl 163 (418)
||||+ ||++++.+++.+|+++|+.|+.+|+++++.+..++||||+|||++|+++||||++|++|||++||+||+|++|+
T Consensus 81 Psg~~-er~~~~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~d~l~~~g~~~~v~~ml~rd~~k~R~ 159 (432)
T 2jan_A 81 PRDVG-ERSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRL 159 (432)
T ss_dssp CCCTT-TSGGGHHHHHHHHHHHHHHHHHHHSCCSSSTTCCEEEETHHHHSSCBHHHHHHHTGGGCBHHHHHHSHHHHHHT
T ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCHHHHHHHHHCCEEHHHHHHHHHHHHHH
T ss_conf 99998-57678899999999999988888831036766459973399874264778999984432000466667898875
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCHHHHHHH-H
Q ss_conf 356883157889898989999999854297020154125889988899997316797179831102368710223543-1
Q gi|254780949|r 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242 (418)
Q Consensus 164 ~~~~~is~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~KmgKS~-~ 242 (418)
++ +|||||||+||||||||||||+++|||++|||||||||||++||||||+.+++++||||+||||++||+|||||. +
T Consensus 160 ~~-~~is~~EF~YpllQayD~v~L~~~~~~dvqiGGsDQ~gNi~~G~~l~~~~~~~~~~~lT~PLL~~~dG~K~gks~~~ 238 (432)
T 2jan_A 160 AG-EGISYTEFSYLLLQANDYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGG 238 (432)
T ss_dssp ST-TCCBHHHHHHHHHHHHHHHHHHHHHCCCEEEECSTTHHHHHHHHHHHHHHHCCCCEEEECCCCBCTTSCBTTBCSSS
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 16-88635655367776879999876249627997477899999768899874787526886325227987832341368
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 0123334579979999988620788898799750688856755543332--10220268898999999730000046799
Q gi|254780949|r 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAA 320 (418)
Q Consensus 243 naIwLd~~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~~--~~~pr~aKk~LA~EiT~lvHGe~~a~~A~ 320 (418)
|||||||++||||+|||||||+||++|++||++||++|++||+++++.+ +++||.||++||.|||++|||++++++|+
T Consensus 239 ~~iwld~~~tsP~~~yq~~~n~~D~~v~kyl~l~T~l~~~eI~~l~~~~~~~p~~r~akk~LA~Evt~lvHGeeaa~~A~ 318 (432)
T 2jan_A 239 GSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQRRLASELTVLVHGEAATAAVE 318 (432)
T ss_dssp CBCBSSTTTSCHHHHHHHHHTCCHHHHHHHHHHHSCCCHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 74242368888699997740278899999999845788778999999742376403678999999999704889999999
Q ss_pred HHHHHHCCCCCCCCC--------CCCEECCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEEC
Q ss_conf 986431025764225--------771030777821699889999984997886899999876987988798048000237
Q gi|254780949|r 321 TAAMECFDMSIHSQH--------MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392 (418)
Q Consensus 321 ~~s~~lF~~~~~~~~--------lp~~~i~~~~i~~~~~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~ 392 (418)
++++.+|+++..++. +|++.+.......+.+++|+|+++|+|+|||||||+|+|||||||+++|+|+++.++
T Consensus 319 ~~~~~lF~~~~~~~~~~~~l~~~~~~~~i~~l~~~~~~~l~dLLv~~gL~~SksEARRLI~qGgV~IN~~kI~d~~~~l~ 398 (432)
T 2jan_A 319 HASRALFGRGELARLDEATLAAALRETTVAELKPGSPDGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQ 398 (432)
T ss_dssp HHHHHTTTSSCTTSCCHHHHHHHHHHSCEEEECSSSCCSHHHHHHHHTSCSSHHHHHHHHTTTCEEESSCEECCTTCCCC
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEECCEECCCCCCCCC
T ss_conf 99999856899765644567764557862330467867699999982897789999999991989989998169433137
Q ss_pred HHHHCCCCEEEEEECCEEEEEEEECC
Q ss_conf 77714797699977785489999719
Q gi|254780949|r 393 LQDFDSTGNIKLSFGKKNHIICHLCG 418 (418)
Q Consensus 393 ~~d~~~~~~liLr~GKK~~~lI~ivg 418 (418)
..+++.+++++||+|||+|++|++||
T Consensus 399 ~~d~~~g~~~iLr~GKK~f~~Vk~ig 424 (432)
T 2jan_A 399 SSDFLHGRWLVLRRGKRSIAGVERIG 424 (432)
T ss_dssp GGGSBTTTEEEEESSSSCEEEEEEC-
T ss_pred HHHHCCCCEEEEEECCEEEEEEEEEE
T ss_conf 87813798899997680089999961