HHsearch results for GI: 254780949 and protein with PDBid: 2yxn_A

>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=100.00  E-value=0  Score=823.91  Aligned_cols=317  Identities=42%  Similarity=0.764  Sum_probs=308.1

Q ss_pred             HHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCC
Q ss_conf             67999999968920022998999998514981899984378762024348999999999985984999982601114488
Q gi|254780949|r    5 KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP   84 (418)
Q Consensus         5 ~~~~~~~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDP   84 (418)
                      .+|++++|.+||+++++|++++|++.++++++++|+||||||+|||||||||+++|+|||++||+||+|+||+||+||||
T Consensus         3 ~~~~~~~L~~Rgli~~~t~~e~L~~~l~~~~~~~Y~G~DPTa~sLHlGhlv~l~~l~~~q~~G~~~v~LiG~~T~~IGDP   82 (322)
T 2yxn_A            3 SSNLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDP   82 (322)
T ss_dssp             CCSHHHHHHHTTCCSEESSHHHHHHHHHHSCCEEEEEECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEEECTTGGGTCCC
T ss_pred             HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCC
T ss_conf             55899999977992013899999999955996799806799875308789999999999985990389953521684599


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             98862102468899999999999998876532677764023301675234313468887522344787534788887403
Q gi|254780949|r   85 SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK  164 (418)
Q Consensus        85 sgk~~~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~  164 (418)
                      |||+++|+.++.+++++|+++|.+|+.++++++.+++++.++||+||++++++++|||++|++||||+||+||+|++|++
T Consensus        83 sgk~~~r~~l~~~~v~~n~~~~~~q~~~il~~~~~~~~~~i~~N~~w~~~~~~~~~l~~~gk~~tv~~ml~r~~~~~r~~  162 (322)
T 2yxn_A           83 SFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLN  162 (322)
T ss_dssp             TTCSSCCCCCCHHHHHHHHHHHHHHHGGGSCSSSGGGCCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHTTCHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             88640000488999999999999999999514478765389622999854775689999872768999974213434002


Q ss_pred             C-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCHHHHHHHHC
Q ss_conf             5-688315788989898999999985429702015412588998889999731679717983110236871022354310
Q gi|254780949|r  165 R-EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG  243 (418)
Q Consensus       165 ~-~~~is~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~KmgKS~~n  243 (418)
                      + ++||||+||+||+||||||+||+++|+|++|+|||||||||++||||+||+++++++|||+|||+++||+|||||++|
T Consensus       163 ~~~~~is~~Ef~YpllQayD~~~L~~~~~~~iqiGGsDQ~~ni~~Grdl~~~~~~~~~~~it~pLl~~~~G~K~gKS~~n  242 (322)
T 2yxn_A          163 REDQGISFTEFSYNLLQGYDFACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGG  242 (322)
T ss_dssp             CTTCCCCHHHHTHHHHHHHHHHHHHHHHCEEEEEECTTCHHHHHHHHHHHHHHHCCCCEEEECCCCBCTTSCBTTEETTE
T ss_pred             CCCCCCCHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCC
T ss_conf             46788427767778884301999736678315653652377888799999983699828998216530101478887337


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf             12333457997999998862078889879975068885675554333--2102202688989999997300000467999
Q gi|254780949|r  244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAAT  321 (418)
Q Consensus       244 aIwLd~~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~--~~~~pr~aKk~LA~EiT~lvHGe~~a~~A~~  321 (418)
                      |||||+++||||+|||||||+||++|++||++||++|++||+++++.  .++++|.||+.||+|||++|||+++|++|++
T Consensus       243 ~i~l~~~~tsp~~~~~k~~n~~D~~v~~yl~~~t~~~~eei~~i~~~~~~~~~~~~~k~~LA~evt~~~hG~e~a~~A~~  322 (322)
T 2yxn_A          243 AVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKR  322 (322)
T ss_dssp             ECBSSTTTSCHHHHHHHHHTCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHSSCCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCC
T ss_conf             65322234586999998817988999999999605999999999998763887889999999999999679999997359