HHsearch results for GI: 254780949 and protein with PDBid: 2yxn_A
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=100.00 E-value=0 Score=823.91 Aligned_cols=317 Identities=42% Similarity=0.764 Sum_probs=308.1
Q ss_pred HHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCC
Q ss_conf 67999999968920022998999998514981899984378762024348999999999985984999982601114488
Q gi|254780949|r 5 KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84 (418)
Q Consensus 5 ~~~~~~~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDP 84 (418)
.+|++++|.+||+++++|++++|++.++++++++|+||||||+|||||||||+++|+|||++||+||+|+||+||+||||
T Consensus 3 ~~~~~~~L~~Rgli~~~t~~e~L~~~l~~~~~~~Y~G~DPTa~sLHlGhlv~l~~l~~~q~~G~~~v~LiG~~T~~IGDP 82 (322)
T 2yxn_A 3 SSNLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDP 82 (322)
T ss_dssp CCSHHHHHHHTTCCSEESSHHHHHHHHHHSCCEEEEEECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEEECTTGGGTCCC
T ss_pred HHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCC
T ss_conf 55899999977992013899999999955996799806799875308789999999999985990389953521684599
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 98862102468899999999999998876532677764023301675234313468887522344787534788887403
Q gi|254780949|r 85 SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164 (418)
Q Consensus 85 sgk~~~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~ 164 (418)
|||+++|+.++.+++++|+++|.+|+.++++++.+++++.++||+||++++++++|||++|++||||+||+||+|++|++
T Consensus 83 sgk~~~r~~l~~~~v~~n~~~~~~q~~~il~~~~~~~~~~i~~N~~w~~~~~~~~~l~~~gk~~tv~~ml~r~~~~~r~~ 162 (322)
T 2yxn_A 83 SFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLN 162 (322)
T ss_dssp TTCSSCCCCCCHHHHHHHHHHHHHHHGGGSCSSSGGGCCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88640000488999999999999999999514478765389622999854775689999872768999974213434002
Q ss_pred C-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCHHHHHHHHC
Q ss_conf 5-688315788989898999999985429702015412588998889999731679717983110236871022354310
Q gi|254780949|r 165 R-EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243 (418)
Q Consensus 165 ~-~~~is~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~KmgKS~~n 243 (418)
+ ++||||+||+||+||||||+||+++|+|++|+|||||||||++||||+||+++++++|||+|||+++||+|||||++|
T Consensus 163 ~~~~~is~~Ef~YpllQayD~~~L~~~~~~~iqiGGsDQ~~ni~~Grdl~~~~~~~~~~~it~pLl~~~~G~K~gKS~~n 242 (322)
T 2yxn_A 163 REDQGISFTEFSYNLLQGYDFACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGG 242 (322)
T ss_dssp CTTCCCCHHHHTHHHHHHHHHHHHHHHHCEEEEEECTTCHHHHHHHHHHHHHHHCCCCEEEECCCCBCTTSCBTTEETTE
T ss_pred CCCCCCCHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCC
T ss_conf 46788427767778884301999736678315653652377888799999983699828998216530101478887337
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 12333457997999998862078889879975068885675554333--2102202688989999997300000467999
Q gi|254780949|r 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAAT 321 (418)
Q Consensus 244 aIwLd~~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~--~~~~pr~aKk~LA~EiT~lvHGe~~a~~A~~ 321 (418)
|||||+++||||+|||||||+||++|++||++||++|++||+++++. .++++|.||+.||+|||++|||+++|++|++
T Consensus 243 ~i~l~~~~tsp~~~~~k~~n~~D~~v~~yl~~~t~~~~eei~~i~~~~~~~~~~~~~k~~LA~evt~~~hG~e~a~~A~~ 322 (322)
T 2yxn_A 243 AVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKR 322 (322)
T ss_dssp ECBSSTTTSCHHHHHHHHHTCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHSSCCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCC
T ss_conf 65322234586999998817988999999999605999999999998763887889999999999999679999997359