HHsearch results for GI: 254780949 and protein with PDBid: 2zp1_A
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3d6u_A* 3d6v_A* 1u7x_A 2hgz_A*
Probab=100.00 E-value=0 Score=390.50 Aligned_cols=272 Identities=19% Similarity=0.245 Sum_probs=217.9
Q ss_pred HHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCC
Q ss_conf 99968920022998999998514981899984378762024348999999999985984999982601114488988621
Q gi|254780949|r 11 ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90 (418)
Q Consensus 11 ~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~ 90 (418)
+|.+||. ++++++++|++++++++.++|+||||||+ |||||+++++.+++||++||+++++|||+||+||||+++
T Consensus 5 ~li~R~~-~ei~~~~~l~~~l~~~~~~vy~G~~PTG~-lHLGh~~~i~~~~~lq~~g~~~~~~iaD~~a~i~~~~~~--- 79 (314)
T 2zp1_A 5 EMIKRNT-SEIISEEELREVLKKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLAAYLNQKGEL--- 79 (314)
T ss_dssp HHHHTTC-SEEETHHHHHHHHTSSSEEEEEEECCCSS-CBHHHHHHHHHHHHHHHTTEEEEEEECHHHHHHTTCCCH---
T ss_pred HHHHCCC-CEECCHHHHHHHHHCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCH---
T ss_conf 9988097-03379999999983699969994689970-448999999999999977996899816546665215899---
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 02468899999999999998876532677764023301675234313468887522344787534788887403568831
Q gi|254780949|r 91 RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170 (418)
Q Consensus 91 R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is 170 (418)
++++.+...+...+. .+.+ ++.++.+++|+....+...+..+++++++++|+++++++.|.+ ++++
T Consensus 80 ------~~~r~~~~~~~~~~~-a~g~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~r~~--~~~~ 145 (314)
T 2zp1_A 80 ------DEIRKIGDYNKKVFE-AMGL-----KAKYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIARED--ENPK 145 (314)
T ss_dssp ------HHHHHHHHHHHHHHH-HTTC-----CCEEEEGGGTTTSHHHHHHHHHHHHHSCHHHHHHHTTTTSCCC--SSCC
T ss_pred ------HHHHHHHHHHHHHHH-HCCC-----CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCC
T ss_conf ------998888888999998-3476-----5430121154410578999999854545410222222222025--6887
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCH-HHHHHHHCCCCCCC
Q ss_conf 57889898989999999854297020154125889988899997316797179831102368710-22354310123334
Q gi|254780949|r 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249 (418)
Q Consensus 171 ~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~-KmgKS~~naIwLd~ 249 (418)
+.||+||+|||||++++ +|++|+||+|||+|+..|||++++ .++++++|+|++.||+ |||||.+|+|||+
T Consensus 146 ~g~f~YP~lQaaD~l~~----~~~~~~~G~DQ~~~~~l~rdl~~~----~~~~~~~p~l~g~dG~~kmsks~~n~I~L~- 216 (314)
T 2zp1_A 146 VAEVIYPIMQVNTSHYL----GVDVAVGGMEQRKIHMLARELLPK----KVVCIHNPVLTGLDGEGKMSSSKGNFIAVD- 216 (314)
T ss_dssp THHHHHHHHHHHHHHHH----TCSEEEEEGGGHHHHHHHHHHSSS----CCEEEEECCCBCTTSSSBCCTTTTCSCBTT-
T ss_pred CCEEECCCCHHHHHHHC----CCCEEEECHHHHHHHHHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-
T ss_conf 64244364010024404----784776518888999986776530----232125777679887456667888877740-
Q ss_pred CCCCHHHHHHHHHHH-------CHHHHHHHHHHH--------------CCCCHHHHHHHHHH---HHCCCCHHHHHHHHH
Q ss_conf 579979999988620-------788898799750--------------68885675554333---210220268898999
Q gi|254780949|r 250 EMTSPYNFWQYWRNI-------DDADVVSFAKRL--------------TTLPMSEIDRMAKL---QGKEINEAKKIIATE 305 (418)
Q Consensus 250 ~~tSPy~fyQf~~n~-------~D~dV~kyLklf--------------T~l~l~EI~~l~~~---~~~~pr~aKk~LA~E 305 (418)
+||.+++.+.++. .+..+..|++.| ++++.++++++++. .+-+|.++|+.||++
T Consensus 217 --D~pe~i~~Ki~~a~td~~~~~~~p~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~eel~~~~~~g~l~~~~~K~~Lae~ 294 (314)
T 2zp1_A 217 --DSPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMYLKNAVAEE 294 (314)
T ss_dssp --CCHHHHHHHHHHSCCCTTCCTTCHHHHHHHHHCCSSEEECCCGGGTCCEEESSHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf --787899886543137887667896189999874140654269887076876379999999846998989999999999
Q ss_pred HHHHHHH
Q ss_conf 9997300
Q gi|254780949|r 306 ITTMVHG 312 (418)
Q Consensus 306 iT~lvHG 312 (418)
|++++.-
T Consensus 295 i~~~l~p 301 (314)
T 2zp1_A 295 LIKILEP 301 (314)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9998599