HHsearch results for GI: 254780949 and protein with PDBid: 2zp1_A

>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3d6u_A* 3d6v_A* 1u7x_A 2hgz_A*
Probab=100.00  E-value=0  Score=390.50  Aligned_cols=272  Identities=19%  Similarity=0.245  Sum_probs=217.9

Q ss_pred             HHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCC
Q ss_conf             99968920022998999998514981899984378762024348999999999985984999982601114488988621
Q gi|254780949|r   11 ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES   90 (418)
Q Consensus        11 ~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~   90 (418)
                      +|.+||. ++++++++|++++++++.++|+||||||+ |||||+++++.+++||++||+++++|||+||+||||+++   
T Consensus         5 ~li~R~~-~ei~~~~~l~~~l~~~~~~vy~G~~PTG~-lHLGh~~~i~~~~~lq~~g~~~~~~iaD~~a~i~~~~~~---   79 (314)
T 2zp1_A            5 EMIKRNT-SEIISEEELREVLKKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLAAYLNQKGEL---   79 (314)
T ss_dssp             HHHHTTC-SEEETHHHHHHHHTSSSEEEEEEECCCSS-CBHHHHHHHHHHHHHHHTTEEEEEEECHHHHHHTTCCCH---
T ss_pred             HHHHCCC-CEECCHHHHHHHHHCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCH---
T ss_conf             9988097-03379999999983699969994689970-448999999999999977996899816546665215899---


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             02468899999999999998876532677764023301675234313468887522344787534788887403568831
Q gi|254780949|r   91 RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS  170 (418)
Q Consensus        91 R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is  170 (418)
                            ++++.+...+...+. .+.+     ++.++.+++|+....+...+..+++++++++|+++++++.|.+  ++++
T Consensus        80 ------~~~r~~~~~~~~~~~-a~g~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~r~~--~~~~  145 (314)
T 2zp1_A           80 ------DEIRKIGDYNKKVFE-AMGL-----KAKYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIARED--ENPK  145 (314)
T ss_dssp             ------HHHHHHHHHHHHHHH-HTTC-----CCEEEEGGGTTTSHHHHHHHHHHHHHSCHHHHHHHTTTTSCCC--SSCC
T ss_pred             ------HHHHHHHHHHHHHHH-HCCC-----CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCC
T ss_conf             ------998888888999998-3476-----5430121154410578999999854545410222222222025--6887


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCH-HHHHHHHCCCCCCC
Q ss_conf             57889898989999999854297020154125889988899997316797179831102368710-22354310123334
Q gi|254780949|r  171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK  249 (418)
Q Consensus       171 ~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~-KmgKS~~naIwLd~  249 (418)
                      +.||+||+|||||++++    +|++|+||+|||+|+..|||++++    .++++++|+|++.||+ |||||.+|+|||+ 
T Consensus       146 ~g~f~YP~lQaaD~l~~----~~~~~~~G~DQ~~~~~l~rdl~~~----~~~~~~~p~l~g~dG~~kmsks~~n~I~L~-  216 (314)
T 2zp1_A          146 VAEVIYPIMQVNTSHYL----GVDVAVGGMEQRKIHMLARELLPK----KVVCIHNPVLTGLDGEGKMSSSKGNFIAVD-  216 (314)
T ss_dssp             THHHHHHHHHHHHHHHH----TCSEEEEEGGGHHHHHHHHHHSSS----CCEEEEECCCBCTTSSSBCCTTTTCSCBTT-
T ss_pred             CCEEECCCCHHHHHHHC----CCCEEEECHHHHHHHHHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-
T ss_conf             64244364010024404----784776518888999986776530----232125777679887456667888877740-


Q ss_pred             CCCCHHHHHHHHHHH-------CHHHHHHHHHHH--------------CCCCHHHHHHHHHH---HHCCCCHHHHHHHHH
Q ss_conf             579979999988620-------788898799750--------------68885675554333---210220268898999
Q gi|254780949|r  250 EMTSPYNFWQYWRNI-------DDADVVSFAKRL--------------TTLPMSEIDRMAKL---QGKEINEAKKIIATE  305 (418)
Q Consensus       250 ~~tSPy~fyQf~~n~-------~D~dV~kyLklf--------------T~l~l~EI~~l~~~---~~~~pr~aKk~LA~E  305 (418)
                        +||.+++.+.++.       .+..+..|++.|              ++++.++++++++.   .+-+|.++|+.||++
T Consensus       217 --D~pe~i~~Ki~~a~td~~~~~~~p~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~eel~~~~~~g~l~~~~~K~~Lae~  294 (314)
T 2zp1_A          217 --DSPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMYLKNAVAEE  294 (314)
T ss_dssp             --CCHHHHHHHHHHSCCCTTCCTTCHHHHHHHHHCCSSEEECCCGGGTCCEEESSHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred             --CCHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             --787899886543137887667896189999874140654269887076876379999999846998989999999999


Q ss_pred             HHHHHHH
Q ss_conf             9997300
Q gi|254780949|r  306 ITTMVHG  312 (418)
Q Consensus       306 iT~lvHG  312 (418)
                      |++++.-
T Consensus       295 i~~~l~p  301 (314)
T 2zp1_A          295 LIKILEP  301 (314)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             9998599